Rh2CG207700

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000042
Physical Location & Seq
Reverse (-)
20207712 .. 20235110
27399 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG207700.1

Sequence Viewer

Length: 3483 bp
ATGGGGATTGTAGGCCGCAAGGGTTGCCGATTCTGGCACCACCCCCATTTGGGGTCTTGGGTTGGCCTCGGCCTCCTTCTCCTTACCTTCCTTTTATCAGTTTTGGTTAGGGGGCTAGTTCTGCCAGTGAAGGGTGGAGCAGTGTGGCTGTCGTTTCACCACGATGGCTGGGCGGATATTTTTGGGGAAGCAGTGGTTGAGGGCTGGACGTCTGTACGCGGTCCAGGTGACATGGCTATCGACGGTGGCGTTGGGGATGTGGTTCGGAGCGCAGGTCTGTGGTCTGGCAGTGCCGTGAATTTCGGTACGTTTTGGGCCCCTGGGTGCGATGAACTTGGCGGATGCTATGGAGGTGGCGTCGGTTTTTTGGATGCTATGGGGATTGGTCAACAGATCAGAGGTGATTTGGCTATTGGCTTAGCAGGAGGTGCGGGGGCTGGTGGCGGAGTCGCTGTGTGCTCCAAACCTTCTTGGACCAGCTTCTTCAAGACAAAACAGTGTCATTTAGTTTACGTGCCCCGACCAGTGGAACCGGCAGAAGACATGGAGATTCCTACTGCAGTTGCTGGAAAAACTGCCGAGTTTGCAGTTGGACCAGTTATACGCCAGGGGGGATATATAATTCATTGCAAAAGCAACCTTCATGCACTACAGACTCGAGTGGATGAACTGAAGGCTACCAGAGGGCGGGTTCAGAATGAGATTGATGCAGCTAAGAGAAGAGGAGAAAACATCCATCCTGATGTCGAGCACTGGACGAAAAAAGTTGATGAGAACACTGGAAAAGCAGAGGAATTATTGAATGATGACAGAGCAAAGATGAAGTGTCTCCTTGGTTTTTGTCCTAATCTATTGACCCGTCATCAGCTAAGCAGGAAATCAATAAAGTTGTTGGAGGTAGTTGTTGAGTTGAATGGAAAAGGAGTTTTTCCCAGTATTTCATGTGGTGGTCCTGCTGAAGAGGAAGGTGAAAGAAGTAACGCTAGTCTCTCGGAGCTGAAGCACTTGTCTCTACTAACTGCATTGGAAATAAACATTTCAAATCCTGGGGGAGCGAATGTTAATGAAATTGCCTATCGATTAGAAGGCGACAATTTTCGGCAATTAAAGCATCTTCAACTCAGGAATCTAGATACTACATACATCATTAACTCGAAGGTAACATTTCCTAGCTTGGAGATATTACGTCTCGAAAAGCTACCTAAGTTGGAGGCAGTATGGCAAAACCAACTTGCTCCAGACTCTTTCTGCAGGATTAGAGAAGTTAGAGTTGACAGTTGCCCCAGTTTAATAAATCTCTTTGTGCCTTTTATCACGGAAAGATTAGATGTTCTAAAAACCTTGATGGTGTGGTCCTGCCCGTCACTAGAAGTGGTATTCAAATGCGGAGGACTAAAATTTAAAGAAACACATAACCCATCAACCAAAGAGTTGAAAACTTTCAACTGCTGTCCCAATCTAGAATATTTTGACATACGACACTCTGACAAACTGAAATACATTTTTCAGAAGGAAGAGAGGCTGGAAACAGCGCGAGAGTTTGTGTTCCCAAAAGTAACAGAATTGCAGCTTTGCAACCTGCCCCAATTCAAGAGCATCTATCCAGGGACGCATGTTTCACAGTGGTCTTCACTCCAAGAGCTGGATGTGGATGAATGTGGTGAAGTAAAGATTATAGCCGGGGAACTTTCAGTCTCTCAAGAAAAACAAGAGTCTGCCTCTCACTCTAATCCAATCGAACAACCTCTCATTTTAATTGAGAAGGTAACATTTCCTAGCTTGGAGATATTACGGTTCGAAAAGCTACCTAAGTTGGAGGCAGTATGGCAAAACCAACTTGCTCCAGACTCTTTTTGCAGGATTAGAGAAGTTAGAGTTGACAGTTGCCCCAGTTTAATAAATCTCTTTGTACCTTTTATCACGGAAAGATTAGATGCTCTAAAAACCTTGAGGGTGTCGTCCTGCCCGTCACTAGAAGTGGTATTCAAATGCGGAGGACTAAAATTTAAAGAAACACATGACCCATCAACCAAAGAGTTGAAAAATTTCAACTGCTGTCCCAATCTAGAATATTTTAGCATACAACGCTCTGATAAATTGAAATACATTTGTCAGACAGAAGAGAGGCTGGAAATGGTGCCAAAGTTTGTGTTTCCAAAAGTAACAGAATTGCAGCTTTGCAACCTGCCCCAGTTCAAGAGCATCTATCCAGGGACGCATGTTTCACAGTGGCCTTCACTCCAAAAGCTGAATGTGGATGAATGTGGTGAAGTAAAGATTATAGCCGGGGAGCTTTCAGTCTATCAAGAAAAACAAGAGTTTGCCTCTCACTCTAATCCAATCGAACAACCTCTCATTTTAATTGAGAAGACAGAAGAGCAGCTGGAAATGGTGCCAAAGTTTGTGTTTCCAAAAGTAACAGAATTGCAGCTTTGCAACATGCCCCAATTCAGGAGCATCTATCCAGGGACGCATGTTTCACAGTGGTCTTCACTCCAAAAGCTGAATGTGGATGAATGTGGTGAAGTAAAGATTATAGCCGGGGAACTTTCAGTCTATCAAGAAAAACAAGAGTCTGCCTCTCACTCTAATCCAATCGAACAACCTCTCATTTTAATTGAGAAGGGTTCATCACTCTTTCCCAGCTTGGAAACTTTGACCTTGGGGGCCATGGAGATGTGGAGTGGTCCACCCCCAGCACAGGTCTGTAGCAAAGTGAAATTGGTTGAAGTTCGTGGCGCAACCTTCTGCAAGCACGCTGCTTTTCTTCAGGGATTACACAATCTTGAAAAACTTATTGTGATGGACATGGGAGACAAGGATCCTTGCAGAGAAATATTTGTGGATGCAGGAAATGGTGGAGGGGAAATTCAAGTAAAGAAATTGACGATCAGTGATATGGATGAACTTATGCATATCGGGAAGGAGAGCTCTCAATCAGCAGTTCCGGTTTTCCCAAAATTGGAGAAACTCTGGGTTTGGTGGTGTTCCAGATTAAAGAATCTAGATTCATCCACAATATCCTTCCAGAATCTGACATCGTTGACTGTAGACCATCTTGATGGACTGAAATATTTAGTATCTCATCGGATTGCTAGAAGTTTAATGCAACTCACAAGATTGAAAATCAGATATTGTAAAATAATGGAAGTAATAGTGGCAACTGAGGAAGATGTTGATGAGCTTGCTTTCAGCCAGTTGAAACATTTACAACTCAGTGGTGTACCACATCTCCGAGGCTTGTGCTCGGGAAATTGCATTCTCAAGTTCCCTTCATTAGAAACTTTAAGCATAAGCAGGCGCCTCAAATCGAAGCTTTTCTCCCACGATGAATTCCGATGCAAGATAGATGACGACACTTACGACACAGATGTTGAGGATGCTCCTGCTGATGATGAGGATGGTGGTGACGACAATGAGGTTAATGATGATGGTCATGGTAATGACAAGAAGGATGACGAAGATAGTGCTTGTGATGCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

1160

Amino Acids

129.49

Weight (kDa)

5.63

Isoelectric Point (pI)

40.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_RPS2 PF23247 384 - 453 4.2e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 544 - 655 1.5e-13 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 595 - 756 8.8e-17 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 891 - 1002 1.1e-07 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1002 - 1100 2.1e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 212
Acc36I ACCTGC 3 cut(s) 263, 1587, 2193
AccB1I GGYRCC 4 cut(s) 36, 2137, 2392, 3300
AccB7I CCANNNNNTGG 1 cut(s) 1642
AccI GTMKAC 1 cut(s) 3051
AccII CGCG 2 cut(s) 219, 1534
AciI CCGC 9 cut(s) 16, 173, 219, 339, 431, 444, 688, 1386, 1992
AclWI GGATC 2 cut(s) 2816, 2829
AcsI RAATTY 6 cut(s) 298, 1397, 2003, 2044, 2868, 3332
AcuI CTGAAG 4 cut(s) 692, 978, 1019, 2753
AcyI GRCGYC 3 cut(s) 209, 357, 3301
AfaI GTAC 4 cut(s) 216, 307, 1911, 3225
AjnI CCWGG 7 cut(s) 223, 319, 606, 1045, 1603, 2209, 2464
Alw21I GWGCWC 4 cut(s) 461, 753, 2933, 3248
Alw26I GTCTC 6 cut(s) 833, 992, 1014, 1193, 1699, 2808
AlwI GGATC 2 cut(s) 2816, 2829
AlwNI CAGNNNCTG 2 cut(s) 566, 3034
Ama87I CYCGRG 2 cut(s) 657, 3247
AoxI GGCC 6 cut(s) 13, 64, 70, 315, 2231, 2667
ApaI GGGCCC 1 cut(s) 319
ApeKI GCWGC 6 cut(s) 710, 1567, 2173, 2380, 2428, 2759
ApoI RAATTY 6 cut(s) 298, 1397, 2003, 2044, 2868, 3332
Asp700I GAANNNNTTC 3 cut(s) 1439, 2045, 3317
AspLEI GCGC 4 cut(s) 272, 1534, 2741, 3303
AspS9I GGNCC 9 cut(s) 221, 315, 316, 474, 593, 950, 1353, 2667, 2687
AsuC2I CCSGG 3 cut(s) 1681, 2287, 2542
AsuHPI GGTGA 8 cut(s) 149, 239, 413, 980, 1673, 2279, 2534, 3419
AsuII TTCGAA 1 cut(s) 1797
AvaI CYCGRG 2 cut(s) 657, 3247
AvaII GGWCC 6 cut(s) 221, 474, 593, 950, 1353, 2687
BaeGI GKGCMC 2 cut(s) 319, 519
BamHI GGATCC 1 cut(s) 2821
BanI GGYRCC 4 cut(s) 36, 2137, 2392, 3300
BanII GRGCYC 2 cut(s) 319, 2933
BbsI GAAGAC 4 cut(s) 546, 1620, 2375, 2481
Bbv12I GWGCWC 4 cut(s) 461, 753, 2933, 3248
BbvI GCAGC 6 cut(s) 722, 1579, 2185, 2392, 2440, 2746
BceAI ACGGC 1 cut(s) 278
BcgI CGANNNNNNTGC 4 cut(s) 3225, 3259, 3449, 3483
BciT130I CCWGG 7 cut(s) 225, 321, 608, 1047, 1605, 2211, 2466
BcnI CCSGG 3 cut(s) 1681, 2287, 2542
BcoDI GTCTC 6 cut(s) 833, 992, 1014, 1193, 1699, 2808
BfmI CTRYAG 5 cut(s) 558, 650, 1249, 2707, 3048
BfoI RGCGCY 1 cut(s) 3304
BfuAI ACCTGC 3 cut(s) 263, 1587, 2193
BisI GCNGC 7 cut(s) 16, 711, 1568, 2174, 2381, 2429, 2760
BlpI GCTNAGC 2 cut(s) 418, 869
BlsI GCNGC 7 cut(s) 17, 712, 1569, 2175, 2382, 2430, 2761
Bme18I GGWCC 6 cut(s) 221, 474, 593, 950, 1353, 2687
BmeT110I CYCGRG 2 cut(s) 657, 3247
BmgT120I GGNCC 9 cut(s) 221, 315, 316, 474, 593, 950, 1353, 2667, 2687
BmiI GGNNCC 9 cut(s) 38, 317, 318, 531, 2139, 2394, 2668, 2823, 3302
BmrI ACTGGG 4 cut(s) 927, 1278, 1884, 2185
BmuI ACTGGG 4 cut(s) 927, 1278, 1884, 2185
BpiI GAAGAC 4 cut(s) 546, 1620, 2375, 2481
BplI GAGNNNNNCTC 6 cut(s) 1703, 1735, 2309, 2341, 2564, 2596
BpmI CTGGAG 2 cut(s) 1221, 1827
Bpu1102I GCTNAGC 2 cut(s) 418, 869
Bpu14I TTCGAA 1 cut(s) 1797
BpuEI CTTGAG 3 cut(s) 1683, 1969, 3248
BpuMI CCSGG 3 cut(s) 1681, 2287, 2542
Bsa29I ATCGAT 1 cut(s) 1078
BsaAI YACGTR 1 cut(s) 514
BsaHI GRCGYC 3 cut(s) 209, 357, 3301
BsaWI WCCGGW 1 cut(s) 2947
Bse118I RCCGGY 1 cut(s) 532
Bse3DI GCAATG 1 cut(s) 625
BseBI CCWGG 7 cut(s) 225, 321, 608, 1047, 1605, 2211, 2466
BseCI ATCGAT 1 cut(s) 1078
BseMI GCAATG 1 cut(s) 625
BseMII CTCAG 3 cut(s) 1135, 3156, 3229
BseRI GAGGAG 1 cut(s) 738
BseSI GKGCMC 2 cut(s) 319, 519
BseXI GCAGC 6 cut(s) 722, 1579, 2185, 2392, 2440, 2746
BseYI CCCAGC 3 cut(s) 168, 2642, 2695
Bsh1236I CGCG 2 cut(s) 219, 1534
BshFI GGCC 6 cut(s) 15, 66, 72, 317, 2233, 2669
BshNI GGYRCC 4 cut(s) 36, 2137, 2392, 3300
BshVI ATCGAT 1 cut(s) 1078
BsiHKAI GWGCWC 4 cut(s) 461, 753, 2933, 3248
BsiHKCI CYCGRG 2 cut(s) 657, 3247
BsiSI CCGG 5 cut(s) 533, 1680, 2286, 2541, 2948
BslFI GGGAC 5 cut(s) 1437, 1621, 2043, 2227, 2482
BsmAI GTCTC 6 cut(s) 833, 992, 1014, 1193, 1699, 2808
BsmBI CGTCTC 1 cut(s) 1193
BsmFI GGGAC 5 cut(s) 1437, 1621, 2043, 2227, 2482
BsmI GAATGC 1 cut(s) 3258
BsnI GGCC 6 cut(s) 15, 66, 72, 317, 2233, 2669
BsoBI CYCGRG 2 cut(s) 657, 3247
Bsp119I TTCGAA 1 cut(s) 1797
Bsp120I GGGCCC 1 cut(s) 315
Bsp1286I GDGCHC 6 cut(s) 319, 461, 519, 753, 2933, 3248
Bsp143I GATC 3 cut(s) 393, 2821, 2889
Bsp1720I GCTNAGC 2 cut(s) 418, 869
Bsp19I CCATGG 1 cut(s) 2670
BspACI CCGC 9 cut(s) 16, 173, 219, 339, 431, 444, 688, 1386, 1992
BspANI GGCC 6 cut(s) 15, 66, 72, 317, 2233, 2669
BspCNI CTCAG 3 cut(s) 1134, 3157, 3228
BspDI ATCGAT 1 cut(s) 1078
BspFNI CGCG 2 cut(s) 219, 1534
BspLI GGNNCC 9 cut(s) 38, 317, 318, 531, 2139, 2394, 2668, 2823, 3302
BspMAI CTGCAG 2 cut(s) 562, 1253
BspMI ACCTGC 3 cut(s) 263, 1587, 2193
BspPI GGATC 2 cut(s) 2816, 2829
BspQI GCTCTTC 1 cut(s) 2370
BspT104I TTCGAA 1 cut(s) 1797
BspT107I GGYRCC 4 cut(s) 36, 2137, 2392, 3300
BsrDI GCAATG 1 cut(s) 625
BsrFI RCCGGY 1 cut(s) 532
BssAI RCCGGY 1 cut(s) 532
BssMI GATC 3 cut(s) 393, 2821, 2889
BssNI GRCGYC 3 cut(s) 209, 357, 3301
BssT1I CCWWGG 3 cut(s) 832, 2661, 2670
Bst2UI CCWGG 7 cut(s) 225, 321, 608, 1047, 1605, 2211, 2466
Bst4CI ACNGT 9 cut(s) 245, 498, 1277, 1623, 1794, 1883, 2229, 2484, 3049
Bst6I CTCTTC 5 cut(s) 715, 954, 1509, 2115, 2370
BstACI GRCGYC 3 cut(s) 209, 357, 3301
BstAPI GCANNNNNTGC 2 cut(s) 24, 428
BstBAI YACGTR 1 cut(s) 514
BstBI TTCGAA 1 cut(s) 1797
BstC8I GCNNGC 4 cut(s) 2753, 2757, 3186, 3299
BstDEI CTNAG 8 cut(s) 418, 714, 869, 1121, 1203, 1809, 3165, 3215
BstDSI CCRYGG 1 cut(s) 2670
BstFNI CGCG 2 cut(s) 219, 1534
BstH2I RGCGCY 1 cut(s) 3304
BstHHI GCGC 4 cut(s) 272, 1534, 2741, 3303
BstKTI GATC 3 cut(s) 396, 2824, 2892
BstMAI GTCTC 6 cut(s) 833, 992, 1014, 1193, 1699, 2808
BstMBI GATC 3 cut(s) 393, 2821, 2889
BstMWI GCNNNNNNNGC 7 cut(s) 24, 121, 428, 584, 1108, 2085, 3476
BstNI CCWGG 7 cut(s) 225, 321, 608, 1047, 1605, 2211, 2466
BstNSI RCATGY 4 cut(s) 1616, 2222, 2443, 2477
BstSFI CTRYAG 5 cut(s) 558, 650, 1249, 2707, 3048
BstSLI GKGCMC 2 cut(s) 319, 519
BstUI CGCG 2 cut(s) 219, 1534
BstV1I GCAGC 6 cut(s) 722, 1579, 2185, 2392, 2440, 2746
BstV2I GAAGAC 4 cut(s) 546, 1620, 2375, 2481
BstX2I RGATCY 1 cut(s) 2821
BstXI CCANNNNNNTGG 1 cut(s) 3062
BstYI RGATCY 1 cut(s) 2821
Bsu15I ATCGAT 1 cut(s) 1078
BsuRI GGCC 6 cut(s) 15, 66, 72, 317, 2233, 2669
BsuTUI ATCGAT 1 cut(s) 1078
BtgI CCRYGG 1 cut(s) 2670
BtgZI GCGATG 1 cut(s) 342
BtsI GCAGTG 3 cut(s) 147, 198, 295
BveI ACCTGC 3 cut(s) 263, 1587, 2193
Cac8I GCNNGC 4 cut(s) 2753, 2757, 3186, 3299
CaiI CAGNNNCTG 2 cut(s) 566, 3034
CfoI GCGC 4 cut(s) 272, 1534, 2741, 3303
Cfr10I RCCGGY 1 cut(s) 532
Cfr13I GGNCC 9 cut(s) 221, 315, 316, 474, 593, 950, 1353, 2667, 2687
ClaI ATCGAT 1 cut(s) 1078
CseI GACGC 4 cut(s) 346, 1618, 2224, 2479
Csp6I GTAC 4 cut(s) 215, 306, 1910, 3224
CviQI GTAC 4 cut(s) 215, 306, 1910, 3224
DdeI CTNAG 8 cut(s) 418, 714, 869, 1121, 1203, 1809, 3165, 3215
DinI GGCGCC 1 cut(s) 3302
DpnI GATC 3 cut(s) 395, 2823, 2891
DpnII GATC 3 cut(s) 393, 2821, 2889
DraI TTTAAA 2 cut(s) 1402, 2008
Eam1104I CTCTTC 5 cut(s) 715, 954, 1509, 2115, 2370
EarI CTCTTC 5 cut(s) 715, 954, 1509, 2115, 2370
EciI GGCGGA 3 cut(s) 188, 354, 459
Ecl136II GAGCTC 1 cut(s) 2931
Eco130I CCWWGG 3 cut(s) 832, 2661, 2670
Eco24I GRGCYC 2 cut(s) 319, 2933
Eco47I GGWCC 6 cut(s) 221, 474, 593, 950, 1353, 2687
Eco53kI GAGCTC 1 cut(s) 2931
Eco57I CTGAAG 4 cut(s) 692, 978, 1019, 2753
Eco88I CYCGRG 2 cut(s) 657, 3247
EcoICRI GAGCTC 1 cut(s) 2931
EcoO109I RGGNCCY 1 cut(s) 316
EcoRI GAATTC 1 cut(s) 3332
EcoRII CCWGG 7 cut(s) 223, 319, 606, 1045, 1603, 2209, 2464
EcoT14I CCWWGG 3 cut(s) 832, 2661, 2670
EcoT22I ATGCAT 1 cut(s) 2916
EcoT38I GRGCYC 2 cut(s) 319, 2933
EgeI GGCGCC 1 cut(s) 3302
EheI GGCGCC 1 cut(s) 3302
ErhI CCWWGG 3 cut(s) 832, 2661, 2670
Esp3I CGTCTC 1 cut(s) 1193
FaqI GGGAC 5 cut(s) 1437, 1621, 2043, 2227, 2482
FauI CCCGC 2 cut(s) 424, 681
FblI GTMKAC 1 cut(s) 3051
Fnu4HI GCNGC 7 cut(s) 16, 711, 1568, 2174, 2381, 2429, 2760
FriOI GRGCYC 2 cut(s) 319, 2933
Fsp4HI GCNGC 7 cut(s) 16, 711, 1568, 2174, 2381, 2429, 2760
GlaI GCGC 4 cut(s) 271, 1533, 2740, 3302
GluI GCNGC 7 cut(s) 16, 711, 1568, 2174, 2381, 2429, 2760
GsaI CCCAGC 3 cut(s) 172, 2646, 2699
GsuI CTGGAG 2 cut(s) 1221, 1827
HaeII RGCGCY 1 cut(s) 3304
HaeIII GGCC 6 cut(s) 15, 66, 72, 317, 2233, 2669
HapII CCGG 5 cut(s) 533, 1680, 2286, 2541, 2948
HgaI GACGC 4 cut(s) 346, 1618, 2224, 2479
HhaI GCGC 4 cut(s) 272, 1534, 2741, 3303
Hin1I GRCGYC 3 cut(s) 209, 357, 3301
Hin6I GCGC 4 cut(s) 270, 1532, 2739, 3301
HinP1I GCGC 4 cut(s) 270, 1532, 2739, 3301
HincII GTYRAC 4 cut(s) 389, 1273, 1879, 3045
HindII GTYRAC 4 cut(s) 389, 1273, 1879, 3045
HindIII AAGCTT 1 cut(s) 3314
HpaII CCGG 5 cut(s) 533, 1680, 2286, 2541, 2948
HphI GGTGA 8 cut(s) 149, 239, 413, 980, 1673, 2279, 2534, 3419
Hpy166II GTNNAC 8 cut(s) 389, 511, 1273, 1879, 2690, 3045, 3052, 3224
Hpy8I GTNNAC 8 cut(s) 389, 511, 1273, 1879, 2690, 3045, 3052, 3224
Hpy99I CGWCG 2 cut(s) 245, 362
HpyCH4III ACNGT 9 cut(s) 245, 498, 1277, 1623, 1794, 1883, 2229, 2484, 3049
HpyCH4IV ACGT 4 cut(s) 209, 308, 513, 1186
HpyF10VI GCNNNNNNNGC 7 cut(s) 24, 121, 428, 584, 1108, 2085, 3476
HpyF3I CTNAG 8 cut(s) 418, 714, 869, 1121, 1203, 1809, 3165, 3215
HpySE526I ACGT 4 cut(s) 209, 308, 513, 1186
Hsp92I GRCGYC 3 cut(s) 209, 357, 3301
HspAI GCGC 4 cut(s) 270, 1532, 2739, 3301
KasI GGCGCC 1 cut(s) 3300
Kzo9I GATC 3 cut(s) 393, 2821, 2889
LguI GCTCTTC 1 cut(s) 2370
Lsp1109I GCAGC 6 cut(s) 722, 1579, 2185, 2392, 2440, 2746
MaeII ACGT 4 cut(s) 209, 308, 513, 1186
MalI GATC 3 cut(s) 395, 2823, 2891
MboI GATC 3 cut(s) 393, 2821, 2889
MflI RGATCY 1 cut(s) 2821
MhlI GDGCHC 6 cut(s) 319, 461, 519, 753, 2933, 3248
Mly113I GGCGCC 1 cut(s) 3301
MlyI GAGTC 6 cut(s) 456, 649, 1235, 1721, 1841, 2582
MmeI TCCRAC 4 cut(s) 571, 873, 1188, 1794
Mph1103I ATGCAT 1 cut(s) 2916
MroXI GAANNNNTTC 3 cut(s) 1439, 2045, 3317
MslI CAYNNNNRTG 5 cut(s) 162, 741, 2675, 3060, 3441
MspA1I CMGCKG 1 cut(s) 2383
MspI CCGG 5 cut(s) 533, 1680, 2286, 2541, 2948
Mva1269I GAATGC 1 cut(s) 3258
MvaI CCWGG 7 cut(s) 225, 321, 608, 1047, 1605, 2211, 2466
MvnI CGCG 2 cut(s) 219, 1534
MwoI GCNNNNNNNGC 7 cut(s) 24, 121, 428, 584, 1108, 2085, 3476
NarI GGCGCC 1 cut(s) 3301
NciI CCSGG 3 cut(s) 1681, 2287, 2542
NcoI CCATGG 1 cut(s) 2670
NdeII GATC 3 cut(s) 393, 2821, 2889
NlaIV GGNNCC 9 cut(s) 38, 317, 318, 531, 2139, 2394, 2668, 2823, 3302
NmeAIII GCCGAG 2 cut(s) 48, 604
NmuCI GTSAC 4 cut(s) 227, 1362, 1968, 3407
NsiI ATGCAT 1 cut(s) 2916
NspI RCATGY 4 cut(s) 1616, 2222, 2443, 2477
NspV TTCGAA 1 cut(s) 1797
PaeR7I CTCGAG 1 cut(s) 657
PasI CCCWGGG 1 cut(s) 320
PciSI GCTCTTC 1 cut(s) 2370
PcsI WCGNNNNNNNCGW 3 cut(s) 246, 1964, 3360
PctI GAATGC 1 cut(s) 3258
PdmI GAANNNNTTC 3 cut(s) 1439, 2045, 3317
PfeI GAWTC 6 cut(s) 30, 550, 1126, 3001, 3008, 3031
PflMI CCANNNNNTGG 1 cut(s) 1642
PkrI GCNGC 7 cut(s) 17, 712, 1569, 2175, 2382, 2430, 2761
PleI GAGTC 6 cut(s) 455, 649, 1235, 1720, 1841, 2581
PluTI GGCGCC 1 cut(s) 3304
PpsI GAGTC 6 cut(s) 455, 649, 1235, 1720, 1841, 2581
Ppu21I YACGTR 1 cut(s) 514
Psp124BI GAGCTC 1 cut(s) 2933
Psp6I CCWGG 7 cut(s) 223, 319, 606, 1045, 1603, 2209, 2464
PspFI CCCAGC 3 cut(s) 168, 2642, 2695
PspGI CCWGG 7 cut(s) 223, 319, 606, 1045, 1603, 2209, 2464
PspN4I GGNNCC 9 cut(s) 38, 317, 318, 531, 2139, 2394, 2668, 2823, 3302
PspOMI GGGCCC 1 cut(s) 315
PspPI GGNCC 9 cut(s) 221, 315, 316, 474, 593, 950, 1353, 2667, 2687
PspXI VCTCGAGB 1 cut(s) 657
PstI CTGCAG 2 cut(s) 562, 1253
PstNI CAGNNNCTG 2 cut(s) 566, 3034
PsuI RGATCY 1 cut(s) 2821
PvuII CAGCTG 1 cut(s) 2383
RsaI GTAC 4 cut(s) 216, 307, 1911, 3225
RsaNI GTAC 4 cut(s) 215, 306, 1910, 3224
RseI CAYNNNNRTG 5 cut(s) 162, 741, 2675, 3060, 3441
SacI GAGCTC 1 cut(s) 2933
SapI GCTCTTC 1 cut(s) 2370
SatI GCNGC 7 cut(s) 16, 711, 1568, 2174, 2381, 2429, 2760
Sau3AI GATC 3 cut(s) 393, 2821, 2889
Sau96I GGNCC 9 cut(s) 221, 315, 316, 474, 593, 950, 1353, 2667, 2687
SchI GAGTC 6 cut(s) 456, 649, 1235, 1721, 1841, 2582
SduI GDGCHC 6 cut(s) 319, 461, 519, 753, 2933, 3248
SfcI CTRYAG 5 cut(s) 558, 650, 1249, 2707, 3048
SfoI GGCGCC 1 cut(s) 3302
Sfr274I CTCGAG 1 cut(s) 657
SfuI TTCGAA 1 cut(s) 1797
SinI GGWCC 6 cut(s) 221, 474, 593, 950, 1353, 2687
SlaI CTCGAG 1 cut(s) 657
SmiMI CAYNNNNRTG 5 cut(s) 162, 741, 2675, 3060, 3441
SmlI CTYRAG 4 cut(s) 657, 1698, 1948, 3263
SmoI CTYRAG 4 cut(s) 657, 1698, 1948, 3263
SsiI CCGC 9 cut(s) 16, 173, 219, 339, 431, 444, 688, 1386, 1992
SspDI GGCGCC 1 cut(s) 3300
SspI AATATT 4 cut(s) 1466, 2072, 2838, 3074
SstI GAGCTC 1 cut(s) 2933
StyI CCWWGG 3 cut(s) 832, 2661, 2670
TaaI ACNGT 9 cut(s) 245, 498, 1277, 1623, 1794, 1883, 2229, 2484, 3049
TaiI ACGT 4 cut(s) 212, 311, 516, 1189
TauI GCSGC 1 cut(s) 18
TfiI GAWTC 6 cut(s) 30, 550, 1126, 3001, 3008, 3031
TseFI GTSAC 4 cut(s) 227, 1362, 1968, 3407
TseI GCWGC 6 cut(s) 710, 1567, 2173, 2380, 2428, 2759
Tsp45I GTSAC 4 cut(s) 227, 1362, 1968, 3407
TspGWI ACGGA 2 cut(s) 1331, 1937
Van91I CCANNNNNTGG 1 cut(s) 1642
VpaK11BI GGWCC 6 cut(s) 221, 474, 593, 950, 1353, 2687
XapI RAATTY 6 cut(s) 298, 1397, 2003, 2044, 2868, 3332
XbaI TCTAGA 4 cut(s) 1129, 1459, 2065, 3004
XceI RCATGY 4 cut(s) 1616, 2222, 2443, 2477
XhoI CTCGAG 1 cut(s) 657
XmiI GTMKAC 1 cut(s) 3051
XmnI GAANNNNTTC 3 cut(s) 1439, 2045, 3317
ZraI GACGTC 1 cut(s) 210
Zsp2I ATGCAT 1 cut(s) 2916
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.