Rh2DG216800

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
20766104 .. 20768643
2540 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG216800.1

Sequence Viewer

Length: 1521 bp
ATGGTTAGAAAACTTAAGGATTATTGTCTATTACTAGACGGTTATGATGATACACTGATAAGAATGCATGATCTTGTCCGGGATGTTGCTACTAGGATTTCGCACAGAGATCACCATGTCTTATCAGTCGCATATGGAGCTGAGTTGAAAGAATGGCCAGATAAGGATTTCTTTGAAAAGTGCACTATGATAACTTTGCCTTCCCGCAGAATCCCCAGCTTGACGAGACTGGAAGACTTGAGGCTGCGAAACAGTTTTAACCAATGGGATGGTGAACCAGTGATTGGGGAAACAAGTAACACAAGCCTTTCTGAGCTGAAGTACTTGTCTCATCTAACTGCATTGGACATACATATTCCAGATGGCAACATGATTCCAGCGAACATCTTCTCCAGTAAGTTAGAAAGGTACCACATAATAATTGGTGATGAGTGGACATGGCACAATGTGGATGAAACCTTCAATACTTTGAAACTCAAGCTGACTCCAAACAATGACCAATTGCACCAGGATCTAGAAATGCTGCTGAAGAGATCTGACGATTGGCACTTGGATTTGTTGGAGGGTGTTTGTGATATTGTCAATCAATTCGATAATGAGGATTTTCAACAACTCAAACATCTGCATGTCCAAAACAGTGCTTATGCTGGGTCCAAAGAAATCATTTTGGAGAACCAGGTGGATAGTGTGGTGCAACATTTCATGAATGGGAAGGTTATGTTGCCCAACTTAAGGAGCTTGTCCCTGTATCAGTGTGGTGGTTCAAGATTCTTATTATCATCATCAATGGCTAGATCTCTTCTGCAACTCAAACATCTTCAGATATCCAGATGTGAAACTGTGGAAGAGATAGTATCAATAGCAGATGACATGTCTGGCTCCAAACCAGCTGGCCTGGTTTTCCCAAAATTGGAAATTCTAGAGGTGGTACACTGTGGCAGGTTAAAGACATTAGGTTTATCTGCAGTGTCCTTCGAGAAGCTTACAACTCTGGAAGTGATTGGCTGTCATGAATTGAAATATTTGACAACTTGCTCGGTAGCAGAAAGTTCAATGCAACTTAGAAGAATGGAAGTTAAGAATTGCGAAAGACTGATAGTGATGGTGGTAAGCAATGGAGATCATGGTGCAGAAAATGAAATTAATTTTGGTCAGATGCTATATTTGGAACTTTCTTCTCTACCAAGTCTGCAAGGCTTTTGCTCAGGTCATTGCATTGCCAAATTCCCAGTCTTAGAAACTATAATAGTAATTGACTGCCCTGTCGAGTTGGAGATTTCTCCTGATGGGGTACTCCAAAGCGAATCAAAACCAGAAAGAGTAGTTACAATAGAAGTCGATGAGGAGGGTGAAGATGATGATGATGACAACAACCATGATGGAATGTCTGCTACTTTTGTAGACATGCCTCCTCCTGAGCGTTTTGAGCAAGTTGAAACAGTTCAGGGAAAGCAAAAGTATCCAGAGGATGCCTATGAACCTCAAATCACTGAAACTACTGCTCCTGAAATTCAAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

506

Amino Acids

57.47

Weight (kDa)

4.81

Isoelectric Point (pI)

44.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_RPS2 PF23247 236 - 363 1.6e-15 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 324 - 421 6.2e-07 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1262
Acc36I ACCTGC 1 cut(s) 930
Acc65I GGTACC 1 cut(s) 408
AccB1I GGYRCC 1 cut(s) 408
AccB7I CCANNNNNTGG 1 cut(s) 284
AccI GTMKAC 1 cut(s) 1401
AciI CCGC 1 cut(s) 205
AclWI GGATC 1 cut(s) 519
AcoI YGGCCR 1 cut(s) 155
AcsI RAATTY 4 cut(s) 915, 1223, 1509, 1515
AcuI CTGAAG 3 cut(s) 338, 548, 803
AdeI CACNNNGTG 1 cut(s) 448
AfaI GTAC 4 cut(s) 323, 410, 930, 1293
AfiI CCNNNNNNNGG 3 cut(s) 284, 732, 910
AflII CTTAAG 2 cut(s) 14, 730
AflIII ACRYGT 1 cut(s) 870
AjnI CCWGG 3 cut(s) 507, 675, 894
AjuI GAANNNNNNNTTGG 4 cut(s) 267, 299, 1131, 1163
AloI GAACNNNNNNTCC 2 cut(s) 374, 406
AluBI AGCT 7 cut(s) 140, 219, 316, 481, 738, 890, 982
AluI AGCT 7 cut(s) 140, 219, 316, 481, 738, 890, 982
Alw21I GWGCWC 1 cut(s) 185
Alw26I GTCTC 2 cut(s) 220, 333
Alw44I GTGCAC 1 cut(s) 181
AlwI GGATC 1 cut(s) 519
AoxI GGCC 2 cut(s) 155, 892
ApaLI GTGCAC 1 cut(s) 181
ApeKI GCWGC 2 cut(s) 244, 523
ApoI RAATTY 4 cut(s) 915, 1223, 1509, 1515
ArsI GACNNNNNNTTYG 2 cut(s) 1215, 1247
AseI ATTAAT 1 cut(s) 1143
Asp700I GAANNNNTTC 2 cut(s) 386, 1440
Asp718I GGTACC 1 cut(s) 408
AspS9I GGNCC 1 cut(s) 651
AsuC2I CCSGG 1 cut(s) 80
AsuHPI GGTGA 4 cut(s) 104, 284, 437, 1361
AvaII GGWCC 1 cut(s) 651
BaeGI GKGCMC 1 cut(s) 185
BalI TGGCCA 1 cut(s) 157
BanI GGYRCC 1 cut(s) 408
BbsI GAAGAC 1 cut(s) 240
Bbv12I GWGCWC 1 cut(s) 185
BbvI GCAGC 2 cut(s) 231, 510
BccI CCATC 5 cut(s) 263, 356, 1096, 1280, 1373
BciT130I CCWGG 3 cut(s) 509, 677, 896
BciVI GTATCC 1 cut(s) 1470
BcnI CCSGG 1 cut(s) 80
BcoDI GTCTC 2 cut(s) 220, 333
BfaI CTAG 5 cut(s) 35, 93, 515, 792, 920
BfmI CTRYAG 1 cut(s) 963
BfrI CTTAAG 2 cut(s) 14, 730
BfuAI ACCTGC 1 cut(s) 930
BfuI GTATCC 1 cut(s) 1470
BglII AGATCT 2 cut(s) 533, 794
BisI GCNGC 2 cut(s) 245, 524
BlsI GCNGC 2 cut(s) 246, 525
BmcAI AGTACT 1 cut(s) 323
Bme1390I CCNGG 4 cut(s) 80, 509, 677, 896
Bme18I GGWCC 1 cut(s) 651
BmgT120I GGNCC 1 cut(s) 651
BmiI GGNNCC 3 cut(s) 410, 652, 880
BmrFI CCNGG 4 cut(s) 80, 509, 677, 896
BmrI ACTGGG 1 cut(s) 1223
BmsI GCATC 2 cut(s) 1146, 1459
BmuI ACTGGG 1 cut(s) 1223
BpiI GAAGAC 1 cut(s) 240
BpmI CTGGAG 1 cut(s) 376
Bpu10I CCTNAGC 2 cut(s) 1204, 1416
BpuEI CTTGAG 2 cut(s) 259, 461
BpuMI CCSGG 1 cut(s) 80
BsaXI ACNNNNNCTCC 4 cut(s) 374, 404, 1486, 1516
Bsc4I CCNNNNNNNGG 3 cut(s) 284, 732, 910
Bse1I ACTGG 4 cut(s) 234, 278, 393, 1229
Bse3DI GCAATG 3 cut(s) 1120, 1210, 1215
BseBI CCWGG 3 cut(s) 509, 677, 896
BseGI GGATG 4 cut(s) 88, 274, 457, 1474
BseLI CCNNNNNNNGG 3 cut(s) 284, 732, 910
BseMI GCAATG 3 cut(s) 1120, 1210, 1215
BseMII CTCAG 4 cut(s) 132, 303, 1218, 1407
BseNI ACTGG 4 cut(s) 234, 278, 393, 1229
BseRI GAGGAG 2 cut(s) 1358, 1401
BseSI GKGCMC 1 cut(s) 185
BseXI GCAGC 2 cut(s) 231, 510
BseYI CCCAGC 2 cut(s) 215, 647
BsgI GTGCAG 1 cut(s) 1149
BshFI GGCC 2 cut(s) 157, 894
BshNI GGYRCC 1 cut(s) 408
BsiHKAI GWGCWC 1 cut(s) 185
BsiSI CCGG 1 cut(s) 79
BslFI GGGAC 1 cut(s) 727
BslI CCNNNNNNNGG 3 cut(s) 284, 732, 910
BsmAI GTCTC 2 cut(s) 220, 333
BsmFI GGGAC 1 cut(s) 727
BsmI GAATGC 1 cut(s) 69
BsnI GGCC 2 cut(s) 157, 894
Bsp1286I GDGCHC 1 cut(s) 185
Bsp143I GATC 6 cut(s) 70, 109, 511, 533, 794, 1120
BspACI CCGC 1 cut(s) 205
BspANI GGCC 2 cut(s) 157, 894
BspCNI CTCAG 4 cut(s) 133, 304, 1217, 1408
BspHI TCATGA 2 cut(s) 702, 1009
BspLI GGNNCC 3 cut(s) 410, 652, 880
BspMAI CTGCAG 1 cut(s) 967
BspMI ACCTGC 1 cut(s) 930
BspPI GGATC 1 cut(s) 519
BspT107I GGYRCC 1 cut(s) 408
BspTI CTTAAG 2 cut(s) 14, 730
BsrDI GCAATG 3 cut(s) 1120, 1210, 1215
BsrI ACTGG 4 cut(s) 234, 278, 393, 1229
BssMI GATC 6 cut(s) 70, 109, 511, 533, 794, 1120
Bst2UI CCWGG 3 cut(s) 509, 677, 896
Bst4CI ACNGT 6 cut(s) 41, 254, 638, 841, 935, 1441
Bst6I CTCTTC 3 cut(s) 524, 804, 840
BstAFI CTTAAG 2 cut(s) 14, 730
BstC8I GCNNGC 1 cut(s) 892
BstDEI CTNAG 6 cut(s) 141, 312, 1061, 1204, 1234, 1416
BstF5I GGATG 4 cut(s) 88, 274, 457, 1474
BstKTI GATC 6 cut(s) 73, 112, 514, 536, 797, 1123
BstMAI GTCTC 2 cut(s) 220, 333
BstMBI GATC 6 cut(s) 70, 109, 511, 533, 794, 1120
BstMWI GCNNNNNNNGC 2 cut(s) 137, 1426
BstNI CCWGG 3 cut(s) 509, 677, 896
BstNSI RCATGY 3 cut(s) 629, 874, 1408
BstSCI CCNGG 4 cut(s) 78, 507, 675, 894
BstSFI CTRYAG 1 cut(s) 963
BstSLI GKGCMC 1 cut(s) 185
BstV1I GCAGC 2 cut(s) 231, 510
BstV2I GAAGAC 1 cut(s) 240
BstX2I RGATCY 3 cut(s) 511, 533, 794
BstXI CCANNNNNNTGG 1 cut(s) 269
BstYI RGATCY 3 cut(s) 511, 533, 794
BsuI GTATCC 1 cut(s) 1470
BsuRI GGCC 2 cut(s) 157, 894
BtsCI GGATG 4 cut(s) 88, 274, 457, 1474
BtsI GCAGTG 1 cut(s) 972
BtsIMutI CAGTG 7 cut(s) 53, 285, 643, 758, 931, 972, 1488
BveI ACCTGC 1 cut(s) 930
Cac8I GCNNGC 1 cut(s) 892
CciI TCATGA 2 cut(s) 702, 1009
Cfr13I GGNCC 1 cut(s) 651
CsiI ACCWGGT 1 cut(s) 675
Csp6I GTAC 4 cut(s) 322, 409, 929, 1292
CviQI GTAC 4 cut(s) 322, 409, 929, 1292
DdeI CTNAG 6 cut(s) 141, 312, 1061, 1204, 1234, 1416
DpnI GATC 6 cut(s) 72, 111, 513, 535, 796, 1122
DpnII GATC 6 cut(s) 70, 109, 511, 533, 794, 1120
DraIII CACNNNGTG 1 cut(s) 448
DrdI GACNNNNNNGTC 1 cut(s) 1262
DseDI GACNNNNNNGTC 1 cut(s) 1262
EaeI YGGCCR 1 cut(s) 155
Eam1104I CTCTTC 3 cut(s) 524, 804, 840
EarI CTCTTC 3 cut(s) 524, 804, 840
Eco32I GATATC 1 cut(s) 825
Eco47I GGWCC 1 cut(s) 651
Eco57I CTGAAG 3 cut(s) 338, 548, 803
EcoRII CCWGG 3 cut(s) 507, 675, 894
EcoRV GATATC 1 cut(s) 825
EcoT22I ATGCAT 1 cut(s) 69
FalI AAGNNNNNCTT 2 cut(s) 155, 187
FaqI GGGAC 1 cut(s) 727
FauI CCCGC 1 cut(s) 212
FauNDI CATATG 1 cut(s) 133
FblI GTMKAC 1 cut(s) 1401
Fnu4HI GCNGC 2 cut(s) 245, 524
FokI GGATG 4 cut(s) 95, 281, 464, 1481
Fsp4HI GCNGC 2 cut(s) 245, 524
FspBI CTAG 5 cut(s) 35, 93, 515, 792, 920
GluI GCNGC 2 cut(s) 245, 524
GsaI CCCAGC 2 cut(s) 219, 651
GsuI CTGGAG 1 cut(s) 376
HaeIII GGCC 2 cut(s) 157, 894
HapII CCGG 1 cut(s) 79
HindIII AAGCTT 1 cut(s) 980
HinfI GANTC 5 cut(s) 210, 373, 484, 768, 1304
HpaII CCGG 1 cut(s) 79
HphI GGTGA 4 cut(s) 104, 284, 437, 1361
Hpy166II GTNNAC 5 cut(s) 183, 275, 435, 931, 1402
Hpy188I TCNGA 4 cut(s) 313, 538, 822, 1155
Hpy8I GTNNAC 5 cut(s) 183, 275, 435, 931, 1402
HpyAV CCTTC 4 cut(s) 210, 469, 706, 982
HpyCH4III ACNGT 6 cut(s) 41, 254, 638, 841, 935, 1441
HpyF10VI GCNNNNNNNGC 2 cut(s) 137, 1426
HpyF3I CTNAG 6 cut(s) 141, 312, 1061, 1204, 1234, 1416
KpnI GGTACC 1 cut(s) 412
Kzo9I GATC 6 cut(s) 70, 109, 511, 533, 794, 1120
LmnI GCTCC 4 cut(s) 137, 735, 884, 1507
Lsp1109I GCAGC 2 cut(s) 231, 510
LweI GCATC 2 cut(s) 1146, 1459
MabI ACCWGGT 1 cut(s) 675
MaeI CTAG 5 cut(s) 35, 93, 515, 792, 920
MaeIII GTNAC 2 cut(s) 296, 1324
MalI GATC 6 cut(s) 72, 111, 513, 535, 796, 1122
MboI GATC 6 cut(s) 70, 109, 511, 533, 794, 1120
MboII GAAGA 9 cut(s) 245, 379, 541, 791, 809, 857, 1077, 1167, 1364
MfeI CAATTG 1 cut(s) 500
MflI RGATCY 3 cut(s) 511, 533, 794
MhlI GDGCHC 1 cut(s) 185
MlsI TGGCCA 1 cut(s) 157
MluNI TGGCCA 1 cut(s) 157
MlyI GAGTC 1 cut(s) 478
MmeI TCCRAC 2 cut(s) 540, 1251
Mox20I TGGCCA 1 cut(s) 157
Mph1103I ATGCAT 1 cut(s) 69
MroXI GAANNNNTTC 2 cut(s) 386, 1440
MscI TGGCCA 1 cut(s) 157
MseI TTAA 7 cut(s) 15, 258, 731, 944, 1077, 1143, 1519
MslI CAYNNNNRTG 1 cut(s) 624
Msp20I TGGCCA 1 cut(s) 157
MspA1I CMGCKG 1 cut(s) 890
MspCI CTTAAG 2 cut(s) 14, 730
MspI CCGG 1 cut(s) 79
MspR9I CCNGG 4 cut(s) 80, 509, 677, 896
MunI CAATTG 1 cut(s) 500
Mva1269I GAATGC 1 cut(s) 69
MvaI CCWGG 3 cut(s) 509, 677, 896
MwoI GCNNNNNNNGC 2 cut(s) 137, 1426
NciI CCSGG 1 cut(s) 80
NdeI CATATG 1 cut(s) 133
NdeII GATC 6 cut(s) 70, 109, 511, 533, 794, 1120
NlaIV GGNNCC 3 cut(s) 410, 652, 880
NsiI ATGCAT 1 cut(s) 69
NspI RCATGY 3 cut(s) 629, 874, 1408
PagI TCATGA 2 cut(s) 702, 1009
PciI ACATGT 1 cut(s) 870
PctI GAATGC 1 cut(s) 69
PdmI GAANNNNTTC 2 cut(s) 386, 1440
PfeI GAWTC 4 cut(s) 210, 373, 768, 1304
PflMI CCANNNNNTGG 1 cut(s) 284
PfoI TCCNGGA 1 cut(s) 78
PkrI GCNGC 2 cut(s) 246, 525
PleI GAGTC 1 cut(s) 478
PpsI GAGTC 1 cut(s) 478
PscI ACATGT 1 cut(s) 870
PshBI ATTAAT 1 cut(s) 1143
Psp6I CCWGG 3 cut(s) 507, 675, 894
PspFI CCCAGC 2 cut(s) 215, 647
PspGI CCWGG 3 cut(s) 507, 675, 894
PspN4I GGNNCC 3 cut(s) 410, 652, 880
PspPI GGNCC 1 cut(s) 651
PstI CTGCAG 1 cut(s) 967
PsuI RGATCY 3 cut(s) 511, 533, 794
PvuII CAGCTG 1 cut(s) 890
RsaI GTAC 4 cut(s) 323, 410, 930, 1293
RsaNI GTAC 4 cut(s) 322, 409, 929, 1292
RseI CAYNNNNRTG 1 cut(s) 624
SaqAI TTAA 7 cut(s) 15, 258, 731, 944, 1077, 1143, 1519
SatI GCNGC 2 cut(s) 245, 524
Sau3AI GATC 6 cut(s) 70, 109, 511, 533, 794, 1120
Sau96I GGNCC 1 cut(s) 651
ScaI AGTACT 1 cut(s) 323
SchI GAGTC 1 cut(s) 478
ScrFI CCNGG 4 cut(s) 80, 509, 677, 896
SduI GDGCHC 1 cut(s) 185
SexAI ACCWGGT 1 cut(s) 675
SfaNI GCATC 2 cut(s) 1146, 1459
SfcI CTRYAG 1 cut(s) 963
SinI GGWCC 1 cut(s) 651
SmiMI CAYNNNNRTG 1 cut(s) 624
SmlI CTYRAG 4 cut(s) 14, 238, 476, 730
SmoI CTYRAG 4 cut(s) 14, 238, 476, 730
SsiI CCGC 1 cut(s) 205
SspI AATATT 1 cut(s) 1022
SspMI CTAG 5 cut(s) 35, 93, 515, 792, 920
StyD4I CCNGG 4 cut(s) 78, 507, 675, 894
TaaI ACNGT 6 cut(s) 41, 254, 638, 841, 935, 1441
TaqI TCGA 4 cut(s) 591, 975, 1266, 1338
TatI WGTACW 1 cut(s) 321
TfiI GAWTC 4 cut(s) 210, 373, 768, 1304
Tru1I TTAA 7 cut(s) 15, 258, 731, 944, 1077, 1143, 1519
Tru9I TTAA 7 cut(s) 15, 258, 731, 944, 1077, 1143, 1519
TscAI CASTG 7 cut(s) 60, 285, 643, 758, 938, 972, 1495
TseI GCWGC 2 cut(s) 244, 523
TspDTI ATGAA 6 cut(s) 468, 691, 719, 1026, 1152, 1491
TspRI CASTG 7 cut(s) 60, 285, 643, 758, 938, 972, 1495
Van91I CCANNNNNTGG 1 cut(s) 284
Vha464I CTTAAG 2 cut(s) 14, 730
VneI GTGCAC 1 cut(s) 181
VpaK11BI GGWCC 1 cut(s) 651
VspI ATTAAT 1 cut(s) 1143
XapI RAATTY 4 cut(s) 915, 1223, 1509, 1515
XbaI TCTAGA 2 cut(s) 514, 919
XceI RCATGY 3 cut(s) 629, 874, 1408
XcmI CCANNNNNNNNNTGG 1 cut(s) 419
XmiI GTMKAC 1 cut(s) 1401
XmnI GAANNNNTTC 2 cut(s) 386, 1440
XspI CTAG 5 cut(s) 35, 93, 515, 792, 920
ZrmI AGTACT 1 cut(s) 323
Zsp2I ATGCAT 1 cut(s) 69
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.