Rh5DG123000

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
11159473 .. 11160801
1329 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG123000.1

Sequence Viewer

Length: 936 bp
ATGAATGATCATCTAATGTCACAACCACCTCTCTTTTCAATGAACGAGGGTTCGTTCGTCAACTTGGAAGAATTGGAATTGACCTGCAGCGAAATTTGGAATGGACCACCCCCAGCAAATCCGTTGGTGTTTGACAAATTAAAATCAATAACCTTTCATGGGAGTTGTGCACCTTTCTCCAAGCAAGCTTCGGTCATTTTTCTCCAGAGATTACAAAATCTTGAAAAAATTGGAATGAACAGTTGTTCTTTGGAAGCAATATTTGTCAATCAAGGAATTAGTATTGGGGAAAAAAAACATGATGATGCAGTTAGGAGTGGGGGCCTCCCGCGTGTAAGGATTTTGAGCCTCGAGAGTATGGACGAACTGATGCATCCAGGGAATGACAACTCCCAATCACTACTTTTTCCAAATTTGGAAACTATTGAGGTGTCGTGGTGTATGAGATTAAAGAGTCTAGAGTCATATGCAATATTCTTCCGAAATCTAACAACTTTGACAATATATGCTTGTGATGGATTGAAATATTTAACAAGTTATTCAGTGGCTAAAAGCCTAGTGCAACTCACTACGTTGGAAGTAAACTACTGTGATGGAATTGTAGTAATAGTGTCAAGCAACGGAGATGATGATGCTTGTACAGCAAGAAATGAGATCGCCTTCAGCCACTTGCAGCATTTGAAGCTTACTCGTCTACCAAGTCTACAAGATTTTTGCTCCGGGAATTGCACACTCAAATTCCCATCCTTCATGACCTTACAAGTAGAAGACTGCCCGATCAAGTTGAAGATTTCCCCTGAAGGAGTCCTCATGACCGAGATAGACCATCAATTTCAGCAAAACAGAGTCGATTATGATAGTGATGATGATGAGGAGGGGGATGTTGAAACGGCTAAAAAAAATACTGAAATATTATCAGAAGGGCCTGCGAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

311

Amino Acids

34.67

Weight (kDa)

4.68

Isoelectric Point (pI)

53.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_RPS2 PF23247 25 - 153 1.6e-13 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 158 - 259 4.9e-13 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 92
AccI GTMKAC 2 cut(s) 694, 703
AccII CGCG 1 cut(s) 331
AciI CCGC 1 cut(s) 329
AcsI RAATTY 3 cut(s) 93, 412, 737
AcuI CTGAAG 2 cut(s) 646, 819
AfaI GTAC 1 cut(s) 640
AfiI CCNNNNNNNGG 1 cut(s) 159
AgsI TTSAA 6 cut(s) 39, 224, 523, 682, 787, 887
AjnI CCWGG 1 cut(s) 376
AluBI AGCT 3 cut(s) 188, 685, 933
AluI AGCT 3 cut(s) 188, 685, 933
Alw21I GWGCWC 1 cut(s) 172
Alw44I GTGCAC 1 cut(s) 168
Ama87I CYCGRG 1 cut(s) 350
AoxI GGCC 2 cut(s) 322, 923
ApaLI GTGCAC 1 cut(s) 168
ApeKI GCWGC 2 cut(s) 87, 673
ApoI RAATTY 3 cut(s) 93, 412, 737
AspS9I GGNCC 3 cut(s) 104, 322, 923
AsuC2I CCSGG 1 cut(s) 721
AvaI CYCGRG 1 cut(s) 350
AvaII GGWCC 1 cut(s) 104
BaeGI GKGCMC 1 cut(s) 172
BbsI GAAGAC 1 cut(s) 774
Bbv12I GWGCWC 1 cut(s) 172
BbvI GCAGC 2 cut(s) 99, 685
BccI CCATC 4 cut(s) 509, 587, 751, 834
BceAI ACGGC 1 cut(s) 906
BciT130I CCWGG 1 cut(s) 378
BclI TGATCA 1 cut(s) 7
BcnI CCSGG 1 cut(s) 721
BfaI CTAG 3 cut(s) 458, 557, 934
BfmI CTRYAG 1 cut(s) 85
BfuAI ACCTGC 1 cut(s) 92
BisI GCNGC 2 cut(s) 88, 674
BlsI GCNGC 2 cut(s) 89, 675
Bme1390I CCNGG 2 cut(s) 378, 721
Bme18I GGWCC 1 cut(s) 104
BmeT110I CYCGRG 1 cut(s) 350
BmgT120I GGNCC 3 cut(s) 104, 322, 923
BmiI GGNNCC 1 cut(s) 323
BmrFI CCNGG 2 cut(s) 378, 721
BmsI GCATC 4 cut(s) 295, 360, 382, 622
BpiI GAAGAC 1 cut(s) 774
BpmI CTGGAG 1 cut(s) 188
BpuMI CCSGG 1 cut(s) 721
BsaJI CCNNGG 1 cut(s) 377
Bsc4I CCNNNNNNNGG 1 cut(s) 159
BseBI CCWGG 1 cut(s) 378
BseDI CCNNGG 1 cut(s) 377
BseGI GGATG 3 cut(s) 373, 743, 886
BseLI CCNNNNNNNGG 1 cut(s) 159
BseRI GAGGAG 1 cut(s) 887
BseSI GKGCMC 1 cut(s) 172
BseXI GCAGC 2 cut(s) 99, 685
BseYI CCCAGC 1 cut(s) 112
Bsh1236I CGCG 1 cut(s) 331
BshFI GGCC 2 cut(s) 324, 925
BsiHKAI GWGCWC 1 cut(s) 172
BsiHKCI CYCGRG 1 cut(s) 350
BsiSI CCGG 1 cut(s) 720
BslI CCNNNNNNNGG 1 cut(s) 159
BsnI GGCC 2 cut(s) 324, 925
BsoBI CYCGRG 1 cut(s) 350
Bsp1286I GDGCHC 1 cut(s) 172
Bsp1407I TGTACA 1 cut(s) 638
Bsp143I GATC 3 cut(s) 7, 654, 777
BspACI CCGC 1 cut(s) 329
BspANI GGCC 2 cut(s) 324, 925
BspFNI CGCG 1 cut(s) 331
BspHI TCATGA 2 cut(s) 750, 810
BspLI GGNNCC 1 cut(s) 323
BspMAI CTGCAG 1 cut(s) 89
BspMI ACCTGC 1 cut(s) 92
BsrGI TGTACA 1 cut(s) 638
BssECI CCNNGG 1 cut(s) 377
BssMI GATC 3 cut(s) 7, 654, 777
Bst2UI CCWGG 1 cut(s) 378
Bst4CI ACNGT 2 cut(s) 242, 590
BstAUI TGTACA 1 cut(s) 638
BstC8I GCNNGC 3 cut(s) 186, 927, 931
BstF5I GGATG 3 cut(s) 373, 743, 886
BstFNI CGCG 1 cut(s) 331
BstKTI GATC 3 cut(s) 10, 657, 780
BstMBI GATC 3 cut(s) 7, 654, 777
BstMWI GCNNNNNNNGC 2 cut(s) 641, 682
BstNI CCWGG 1 cut(s) 378
BstSCI CCNGG 2 cut(s) 376, 719
BstSFI CTRYAG 1 cut(s) 85
BstSLI GKGCMC 1 cut(s) 172
BstUI CGCG 1 cut(s) 331
BstV1I GCAGC 2 cut(s) 99, 685
BstV2I GAAGAC 1 cut(s) 774
BsuRI GGCC 2 cut(s) 324, 925
BtsCI GGATG 3 cut(s) 373, 743, 886
BtsIMutI CAGTG 1 cut(s) 549
BveI ACCTGC 1 cut(s) 92
Cac8I GCNNGC 3 cut(s) 186, 927, 931
CciI TCATGA 2 cut(s) 750, 810
Cfr13I GGNCC 3 cut(s) 104, 322, 923
Csp6I GTAC 1 cut(s) 639
CviAII CATG 4 cut(s) 158, 299, 751, 811
CviQI GTAC 1 cut(s) 639
DpnI GATC 3 cut(s) 9, 656, 779
DpnII GATC 3 cut(s) 7, 654, 777
Eco47I GGWCC 1 cut(s) 104
Eco57I CTGAAG 2 cut(s) 646, 819
Eco88I CYCGRG 1 cut(s) 350
EcoO109I RGGNCCY 2 cut(s) 322, 923
EcoRII CCWGG 1 cut(s) 376
EcoT22I ATGCAT 1 cut(s) 375
FaeI CATG 4 cut(s) 161, 302, 754, 814
FatI CATG 4 cut(s) 157, 298, 750, 810
FauI CCCGC 1 cut(s) 336
FauNDI CATATG 1 cut(s) 466
FbaI TGATCA 1 cut(s) 7
FblI GTMKAC 2 cut(s) 694, 703
Fnu4HI GCNGC 2 cut(s) 88, 674
FokI GGATG 3 cut(s) 360, 730, 893
Fsp4HI GCNGC 2 cut(s) 88, 674
FspBI CTAG 3 cut(s) 458, 557, 934
GluI GCNGC 2 cut(s) 88, 674
GsaI CCCAGC 1 cut(s) 116
GsuI CTGGAG 1 cut(s) 188
HaeIII GGCC 2 cut(s) 324, 925
HapII CCGG 1 cut(s) 720
Hin1II CATG 4 cut(s) 161, 302, 754, 814
HincII GTYRAC 1 cut(s) 61
HindII GTYRAC 1 cut(s) 61
HindIII AAGCTT 2 cut(s) 186, 683
HinfI GANTC 4 cut(s) 454, 461, 804, 846
HpaII CCGG 1 cut(s) 720
Hpy166II GTNNAC 5 cut(s) 61, 170, 583, 695, 704
Hpy188I TCNGA 2 cut(s) 482, 919
Hpy188III TCNNGA 6 cut(s) 205, 221, 352, 458, 751, 811
Hpy8I GTNNAC 5 cut(s) 61, 170, 583, 695, 704
HpyAV CCTTC 4 cut(s) 670, 757, 794, 914
HpyCH4III ACNGT 2 cut(s) 242, 590
HpyCH4IV ACGT 1 cut(s) 572
HpyCH4V TGCA 8 cut(s) 87, 170, 308, 373, 470, 562, 673, 729
HpyF10VI GCNNNNNNNGC 2 cut(s) 641, 682
HpySE526I ACGT 1 cut(s) 572
Hsp92II CATG 4 cut(s) 161, 302, 754, 814
Ksp22I TGATCA 1 cut(s) 7
Kzo9I GATC 3 cut(s) 7, 654, 777
LmnI GCTCC 1 cut(s) 722
LpnPI CCDG 7 cut(s) 97, 126, 218, 363, 390, 733, 810
Lsp1109I GCAGC 2 cut(s) 99, 685
LweI GCATC 4 cut(s) 295, 360, 382, 622
MaeI CTAG 3 cut(s) 458, 557, 934
MaeII ACGT 1 cut(s) 572
MaeIII GTNAC 1 cut(s) 18
MalI GATC 3 cut(s) 9, 656, 779
MboI GATC 3 cut(s) 7, 654, 777
MboII GAAGA 4 cut(s) 80, 469, 779, 799
MhlI GDGCHC 1 cut(s) 172
MlyI GAGTC 4 cut(s) 463, 470, 813, 855
MmeI TCCRAC 1 cut(s) 555
MnlI CCTC 8 cut(s) 39, 40, 335, 359, 421, 818, 865, 868
Mph1103I ATGCAT 1 cut(s) 375
MseI TTAA 3 cut(s) 140, 449, 530
MslI CAYNNNNRTG 1 cut(s) 303
MspI CCGG 1 cut(s) 720
MspR9I CCNGG 2 cut(s) 378, 721
MvaI CCWGG 1 cut(s) 378
MvnI CGCG 1 cut(s) 331
MwoI GCNNNNNNNGC 2 cut(s) 641, 682
NciI CCSGG 1 cut(s) 721
NdeI CATATG 1 cut(s) 466
NdeII GATC 3 cut(s) 7, 654, 777
NlaIII CATG 4 cut(s) 161, 302, 754, 814
NlaIV GGNNCC 1 cut(s) 323
NmuCI GTSAC 1 cut(s) 18
NsiI ATGCAT 1 cut(s) 375
PaeR7I CTCGAG 1 cut(s) 350
PagI TCATGA 2 cut(s) 750, 810
PfoI TCCNGGA 1 cut(s) 719
PkrI GCNGC 2 cut(s) 89, 675
PleI GAGTC 4 cut(s) 462, 469, 812, 854
PpsI GAGTC 4 cut(s) 462, 469, 812, 854
Psp6I CCWGG 1 cut(s) 376
PspFI CCCAGC 1 cut(s) 112
PspGI CCWGG 1 cut(s) 376
PspN4I GGNNCC 1 cut(s) 323
PspPI GGNCC 3 cut(s) 104, 322, 923
PstI CTGCAG 1 cut(s) 89
RsaI GTAC 1 cut(s) 640
RsaNI GTAC 1 cut(s) 639
RseI CAYNNNNRTG 1 cut(s) 303
SaqAI TTAA 3 cut(s) 140, 449, 530
SatI GCNGC 2 cut(s) 88, 674
Sau3AI GATC 3 cut(s) 7, 654, 777
Sau96I GGNCC 3 cut(s) 104, 322, 923
SchI GAGTC 4 cut(s) 463, 470, 813, 855
ScrFI CCNGG 2 cut(s) 378, 721
SduI GDGCHC 1 cut(s) 172
SfaNI GCATC 4 cut(s) 295, 360, 382, 622
SfcI CTRYAG 1 cut(s) 85
Sfr274I CTCGAG 1 cut(s) 350
SinI GGWCC 1 cut(s) 104
SlaI CTCGAG 1 cut(s) 350
SmiMI CAYNNNNRTG 1 cut(s) 303
SmlI CTYRAG 1 cut(s) 350
SmoI CTYRAG 1 cut(s) 350
SsiI CCGC 1 cut(s) 329
SspI AATATT 4 cut(s) 261, 474, 527, 912
SspMI CTAG 3 cut(s) 458, 557, 934
StyD4I CCNGG 2 cut(s) 376, 719
TaaI ACNGT 2 cut(s) 242, 590
TaiI ACGT 1 cut(s) 575
TaqI TCGA 2 cut(s) 351, 849
TaqII GACCGA 2 cut(s) 181, 830
TatI WGTACW 1 cut(s) 638
Tru1I TTAA 3 cut(s) 140, 449, 530
Tru9I TTAA 3 cut(s) 140, 449, 530
TscAI CASTG 1 cut(s) 549
TseFI GTSAC 1 cut(s) 18
TseI GCWGC 2 cut(s) 87, 673
Tsp45I GTSAC 1 cut(s) 18
TspDTI ATGAA 5 cut(s) 17, 56, 146, 251, 739
TspGWI ACGGA 2 cut(s) 111, 636
TspRI CASTG 1 cut(s) 549
VneI GTGCAC 1 cut(s) 168
VpaK11BI GGWCC 1 cut(s) 104
XapI RAATTY 3 cut(s) 93, 412, 737
XbaI TCTAGA 1 cut(s) 457
XhoI CTCGAG 1 cut(s) 350
XmiI GTMKAC 2 cut(s) 694, 703
XspI CTAG 3 cut(s) 458, 557, 934
Zsp2I ATGCAT 1 cut(s) 375
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.