Rh5AG125300

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
11832470 .. 11844525
12056 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG125300.1

Sequence Viewer

Length: 2625 bp
ATGGATTTGGAGGTTGTGGGACTTCCTCGTCTGCCAACTTGTAAAATTTTGTTGACATCCAGAACTCGAGATGTTTTATCTTTTGATAAGATGCAGGCGGACAAAGTCTTTCAGCTTGATCTTTTAGGTAAAGAAGAAACTTGGAGTTTGTTTGAGAAGATGGCAGGCGACGTTGTTAAACACAATGGTCGTATACGAAATTTAGCAAAGCAAGTAGCTGAAAGATGTGGAGGTTTGCCCTTATTAGTCGTCACAGTTGCAAGTGCGTTGAAAGAGAAAAAGAAATTACACTCATGGAAAGATGCCTTAAGACAACTTAAAGGGTTTGACAAAGAAGACTCGACAGAAAAAGCAAACCTGGCGCTAGAGTGGAGTTATGACCAACTGGATAATACAGAGCTTCAGCCGTTGTTCTTGCTTTGCGGAATTATAGTAAGGCAGAACCATATTTCTGTGGCAGACCTGTTAAAATATGGTATGGGTTTAGGTTTGTTTACCAACGTCAATACAGTGGAAGGAGCACAGGATAAATTGGAAACACTGCTTGATAAACTTAAAGATTTTTGCTTATTGTTGGACAGTGAAATTGAAGGCAAAAGATCTGAAGACTTGTTCTTAGATGAGACGCATGTTGTTATTGTCCATCGGTTGAATACCGAAGATTTGGAGAATGTGAAGCATCTCCACCTCCAAAACAATATTGATTCTACAGACATCTTCAATAGAAAGGTCGTGTTGCCCAACTTAGTAACCTTGTCGGTGCATGGATGTGATAATTTAAAATTTTTATTCTCATTTTACATGACTAAAAGTCTTGTACAACTCACACATCTAGAGGTATCCGCCTGTAAACTCCTGCAAGAGATTGTATCATCAACAAGAGAAGGCGATGAAGACAATATTGATGGCATGTTTCCTAAACTTGAAGTTTTGAAGCTTAAAGCACTTTCAAACCTGGCTAGATTCAGCACAGGAAATTATATTCAGTTTCCGTCATTGGAAGAATTGGAGGTATATGATTGTGATAATCTAGGGGTATTCATTGGTGATAAAGTTTCTATGAGTAGTGAGGACACTAGAAGATGCAAAGAAGATGAACAGATGGTCTTGGAGGAGGAAGAGAACCTTGAAGTCAAGAGTGAGTCCGTTGTAAAACACTCCCTCTTTAATGAAAAGGTGGGATTTCCTATCTTGGAAAGATTGATCATCAAAGGGATAAGGGAGTTGAAGGCGATATGGCACGTCCAACAATCTCAAAACTCTTTTTGTAGACTCAAGCAAGTTAAGGTTCGGGAATGTGACAATCTAATAAGTTTGTTTCCGCCTAGTGTCATGAGAAGATTGGATACGCTGGAAACCTTGAAGATACGGAACTGCAAATCACTAGAAGTGGTATGTGAGGAAATTGTTGTTGCAGAAGAGGAACAAGAAGTTGTAGAAACAACACCTTCTCCATTTGTATTTCCAAAAGTAACATCCGTGGAGTTGAGGAATCTACCTCAACTTACGGGTTGCATAAATGCTTCACAGTGGCCATCACTCAAACGATTGGAGGTGGAGGGATGTGATAAAGTGGGAATTTTTGCCACAGAATTTTCTCACTTTAGAAAGAAATATGAGACGGAACCTCTAATGACGTCTCAAAAGCCTCTATTTCTAACCGACAAGGATTCGTTCCTCGACTTGGAATACTTATCATTGTTTGACATGGAAATTTGGGATGGACCACCCCCAGCGGATCAGTTGGTGTTTGGCAAATTAAAATCAATCTGCTTTTATGGCAATTGTGCACCTTTCTCCAAGCAAGCTTCGGTCCTTTTCCTCCAGAGATTACAAAATCTTGAAGAAATTGAAATGGGATACAACTCTTACGAAAGAATTAGTGGTTGCACTACTAGGGAAGAAATACATGATGATGCAGTTGGGAGTGGGACCCTCCCCCGTGTAAGGAGTTTGACGCTGTCCGTTATGAACCAACTGATGGATCTAGAGAACGACAACTCCCAATCACTACTTTTTCCAAATTTGAAAATCCTTGAGCTGTCGTTTTGTTCCAGATTAAAAAGTATAGAGTCATCCGCAATATCCTTCCGGAATCTTACAACTTTGAAAGTACGGCATTGTCATGGATTTGAATATATAACAAGTTATTCAGTGGCTAGAAGCTTAGTGCAACTCAAAACATTGGGGGTGGCCTTCTGTCGAAGTGTTGTAGTGATAGTGGCAAGCAATGTGGGAGACGATGATGCTGATGCCGCCTCTGGAAATGAGATTGTTTTCAACCACTTTCAACATTTGATTCTAGGTGGTCTACCAAGGCTACAAGGCTTTTCCTCCGAAAATTGCACAGTCAAATTCCCATCCTCCGTGACCTTAGAAGTAATTGCATGCCCGATCAAGTTGAAGATTTGCCCTGATGGGGTCCTCCTAACAGAAATAGAGGGAAAATGTGAGCAAAAAGGAGATGATGACGTTGATAGTGATGATGATGATCAACAGAAAAATGATGTTGAATCAATGCAGTCCTTGGCACCCTTGATGTGCGTAGCTGCTGATCTTAATCTCGTTCAAGCTATGCCGGTCCTGCTGATCGGCACATGTTGCTTGCGCATATGCATAAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

874

Amino Acids

98.56

Weight (kDa)

5.05

Isoelectric Point (pI)

44.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_RPS2 PF23247 225 - 344 7.1e-15 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 377 - 460 1.3e-15 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 407 - 524 9.1e-18 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 570 - 690 7.7e-09 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 694 - 779 9.1e-08 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 27
AatII GACGTC 1 cut(s) 1640
Acc16I TGCGCA 1 cut(s) 2609
AccB1I GGYRCC 1 cut(s) 2530
AccB7I CCANNNNNTGG 1 cut(s) 1981
AccI GTMKAC 3 cut(s) 193, 1270, 2311
AccIII TCCGGA 1 cut(s) 2091
AciI CCGC 7 cut(s) 98, 423, 843, 1322, 1736, 2079, 2256
AclWI GGATC 2 cut(s) 1746, 1992
AcoI YGGCCR 1 cut(s) 1532
AcsI RAATTY 8 cut(s) 45, 199, 782, 1578, 1592, 1713, 2023, 2354
AcuI CTGAAG 2 cut(s) 386, 624
AcyI GRCGYC 1 cut(s) 1637
AfaI GTAC 2 cut(s) 819, 2115
AfiI CCNNNNNNNGG 4 cut(s) 1684, 1947, 1981, 2419
AflII CTTAAG 1 cut(s) 307
AflIII ACRYGT 1 cut(s) 2597
AhdI GACNNNNNGTC 1 cut(s) 810
AjiI CACGTC 1 cut(s) 1243
AjnI CCWGG 2 cut(s) 357, 954
AloI GAACNNNNNNTCC 2 cut(s) 1985, 2017
AluBI AGCT 9 cut(s) 115, 218, 400, 937, 1808, 2041, 2166, 2549, 2573
AluI AGCT 9 cut(s) 115, 218, 400, 937, 1808, 2041, 2166, 2549, 2573
Alw21I GWGCWC 2 cut(s) 523, 1792
Alw26I GTCTC 4 cut(s) 617, 1613, 1644, 2232
Alw44I GTGCAC 1 cut(s) 1788
AlwI GGATC 2 cut(s) 1746, 1992
Ama87I CYCGRG 1 cut(s) 66
Aor13HI TCCGGA 1 cut(s) 2091
AoxI GGCC 2 cut(s) 1532, 2193
ApaLI GTGCAC 1 cut(s) 1788
ApeKI GCWGC 1 cut(s) 2549
ApoI RAATTY 8 cut(s) 45, 199, 782, 1578, 1592, 1713, 2023, 2354
AspLEI GCGC 2 cut(s) 364, 2610
AspS9I GGNCC 5 cut(s) 1724, 1813, 1932, 2422, 2581
AsuHPI GGTGA 1 cut(s) 1058
AvaI CYCGRG 1 cut(s) 66
AvaII GGWCC 5 cut(s) 1724, 1813, 1932, 2422, 2581
BaeGI GKGCMC 1 cut(s) 1792
BalI TGGCCA 1 cut(s) 1534
BanI GGYRCC 1 cut(s) 2530
BarI GAAGNNNNNNTAC 2 cut(s) 1330, 1362
BbsI GAAGAC 3 cut(s) 342, 612, 900
Bbv12I GWGCWC 2 cut(s) 523, 1792
BbvI GCAGC 1 cut(s) 2536
BccI CCATC 9 cut(s) 154, 651, 899, 1096, 1543, 1715, 1975, 2368, 2411
BceAI ACGGC 2 cut(s) 391, 2132
BciT130I CCWGG 2 cut(s) 359, 956
BciVI GTATCC 3 cut(s) 850, 1339, 1853
BclI TGATCA 2 cut(s) 1203, 2491
BcoDI GTCTC 4 cut(s) 617, 1613, 1644, 2232
BfmI CTRYAG 1 cut(s) 708
BfoI RGCGCY 1 cut(s) 365
BfrI CTTAAG 1 cut(s) 307
BfuI GTATCC 3 cut(s) 850, 1339, 1853
BglII AGATCT 1 cut(s) 599
BisI GCNGC 2 cut(s) 2256, 2550
BlsI GCNGC 2 cut(s) 2257, 2551
Bme1390I CCNGG 2 cut(s) 359, 956
Bme18I GGWCC 5 cut(s) 1724, 1813, 1932, 2422, 2581
BmeRI GACNNNNNGTC 1 cut(s) 810
BmeT110I CYCGRG 1 cut(s) 66
BmgBI CACGTC 1 cut(s) 1243
BmgT120I GGNCC 5 cut(s) 1724, 1813, 1932, 2422, 2581
BmiI GGNNCC 5 cut(s) 1626, 1933, 1934, 2423, 2532
BmrFI CCNGG 2 cut(s) 359, 956
BmsI GCATC 7 cut(s) 81, 292, 688, 1073, 1906, 2236, 2242
BpiI GAAGAC 3 cut(s) 342, 612, 900
BpmI CTGGAG 1 cut(s) 1808
BpuEI CTTGAG 2 cut(s) 1259, 2057
BsaBI GATNNNNATC 2 cut(s) 2490, 2559
BsaHI GRCGYC 1 cut(s) 1637
BsaJI CCNNGG 3 cut(s) 1479, 2315, 2526
BsaWI WCCGGW 1 cut(s) 2091
BsaXI ACNNNNNCTCC 4 cut(s) 1435, 1465, 1985, 2015
Bsc4I CCNNNNNNNGG 4 cut(s) 1684, 1947, 1981, 2419
Bse118I RCCGGY 1 cut(s) 2578
Bse1I ACTGG 1 cut(s) 390
Bse3DI GCAATG 1 cut(s) 2236
Bse8I GATNNNNATC 2 cut(s) 2490, 2559
BseAI TCCGGA 1 cut(s) 2091
BseBI CCWGG 2 cut(s) 359, 956
BseDI CCNNGG 3 cut(s) 1479, 2315, 2526
BseGI GGATG 7 cut(s) 56, 773, 1475, 1568, 1726, 2075, 2360
BseJI GATNNNNATC 2 cut(s) 2490, 2559
BseLI CCNNNNNNNGG 4 cut(s) 1684, 1947, 1981, 2419
BseMI GCAATG 1 cut(s) 2236
BseNI ACTGG 1 cut(s) 390
BseRI GAGGAG 1 cut(s) 1127
BseSI GKGCMC 1 cut(s) 1792
BseXI GCAGC 1 cut(s) 2536
BseYI CCCAGC 1 cut(s) 1732
BshFI GGCC 2 cut(s) 1534, 2195
BshNI GGYRCC 1 cut(s) 2530
BsiHKAI GWGCWC 2 cut(s) 523, 1792
BsiHKCI CYCGRG 1 cut(s) 66
BsiSI CCGG 2 cut(s) 2092, 2579
BslFI GGGAC 2 cut(s) 33, 1945
BslI CCNNNNNNNGG 4 cut(s) 1684, 1947, 1981, 2419
BsmAI GTCTC 4 cut(s) 617, 1613, 1644, 2232
BsmBI CGTCTC 4 cut(s) 617, 1613, 1644, 2232
BsmFI GGGAC 2 cut(s) 33, 1945
BsnI GGCC 2 cut(s) 1534, 2195
BsoBI CYCGRG 1 cut(s) 66
Bsp1286I GDGCHC 2 cut(s) 523, 1792
Bsp13I TCCGGA 1 cut(s) 2091
Bsp1407I TGTACA 1 cut(s) 817
Bsp143I GATC 9 cut(s) 118, 599, 1203, 1738, 1984, 2394, 2491, 2554, 2589
BspACI CCGC 7 cut(s) 98, 423, 843, 1322, 1736, 2079, 2256
BspANI GGCC 2 cut(s) 1534, 2195
BspEI TCCGGA 1 cut(s) 2091
BspHI TCATGA 1 cut(s) 1332
BspLI GGNNCC 5 cut(s) 1626, 1933, 1934, 2423, 2532
BspPI GGATC 2 cut(s) 1746, 1992
BspT107I GGYRCC 1 cut(s) 2530
BspTI CTTAAG 1 cut(s) 307
BsrDI GCAATG 1 cut(s) 2236
BsrFI RCCGGY 1 cut(s) 2578
BsrGI TGTACA 1 cut(s) 817
BsrI ACTGG 1 cut(s) 390
BssAI RCCGGY 1 cut(s) 2578
BssECI CCNNGG 3 cut(s) 1479, 2315, 2526
BssMI GATC 9 cut(s) 118, 599, 1203, 1738, 1984, 2394, 2491, 2554, 2589
BssNAI GTATAC 1 cut(s) 194
BssNI GRCGYC 1 cut(s) 1637
BssT1I CCWWGG 2 cut(s) 2315, 2526
Bst1107I GTATAC 1 cut(s) 194
Bst2UI CCWGG 2 cut(s) 359, 956
Bst4CI ACNGT 5 cut(s) 256, 511, 581, 1530, 2350
Bst6I CTCTTC 2 cut(s) 1113, 1413
BstACI GRCGYC 1 cut(s) 1637
BstAFI CTTAAG 1 cut(s) 307
BstAPI GCANNNNNTGC 1 cut(s) 2601
BstAUI TGTACA 1 cut(s) 817
BstC8I GCNNGC 6 cut(s) 96, 166, 1806, 2227, 2389, 2606
BstDEI CTNAG 4 cut(s) 616, 745, 2167, 2374
BstDSI CCRYGG 1 cut(s) 1479
BstF5I GGATG 7 cut(s) 56, 773, 1475, 1568, 1726, 2075, 2360
BstH2I RGCGCY 1 cut(s) 365
BstHHI GCGC 2 cut(s) 364, 2610
BstKTI GATC 9 cut(s) 121, 602, 1206, 1741, 1987, 2397, 2494, 2557, 2592
BstMAI GTCTC 4 cut(s) 617, 1613, 1644, 2232
BstMBI GATC 9 cut(s) 118, 599, 1203, 1738, 1984, 2394, 2491, 2554, 2589
BstMWI GCNNNNNNNGC 5 cut(s) 359, 1779, 2255, 2584, 2601
BstNI CCWGG 2 cut(s) 359, 956
BstNSI RCATGY 4 cut(s) 632, 913, 2391, 2601
BstSCI CCNGG 2 cut(s) 357, 954
BstSFI CTRYAG 1 cut(s) 708
BstSLI GKGCMC 1 cut(s) 1792
BstV1I GCAGC 1 cut(s) 2536
BstV2I GAAGAC 3 cut(s) 342, 612, 900
BstX2I RGATCY 2 cut(s) 599, 1984
BstYI RGATCY 2 cut(s) 599, 1984
BstZ17I GTATAC 1 cut(s) 194
BsuI GTATCC 3 cut(s) 850, 1339, 1853
BsuRI GGCC 2 cut(s) 1534, 2195
BtgI CCRYGG 1 cut(s) 1479
BtgZI GCGATG 1 cut(s) 903
BtrI CACGTC 1 cut(s) 1243
BtsCI GGATG 7 cut(s) 56, 773, 1475, 1568, 1726, 2075, 2360
BtsI GCAGTG 1 cut(s) 539
BtsIMutI CAGTG 5 cut(s) 516, 539, 586, 1535, 2160
Cac8I GCNNGC 6 cut(s) 96, 166, 1806, 2227, 2389, 2606
CciI TCATGA 1 cut(s) 1332
CfoI GCGC 2 cut(s) 364, 2610
Cfr10I RCCGGY 1 cut(s) 2578
Cfr13I GGNCC 5 cut(s) 1724, 1813, 1932, 2422, 2581
CseI GACGC 2 cut(s) 634, 1966
Csp6I GTAC 2 cut(s) 818, 2114
CspCI CAANNNNNGTGG 2 cut(s) 2214, 2249
CviQI GTAC 2 cut(s) 818, 2114
DdeI CTNAG 4 cut(s) 616, 745, 2167, 2374
DpnI GATC 9 cut(s) 120, 601, 1205, 1740, 1986, 2396, 2493, 2556, 2591
DpnII GATC 9 cut(s) 118, 599, 1203, 1738, 1984, 2394, 2491, 2554, 2589
DraI TTTAAA 1 cut(s) 780
DrdI GACNNNNNNGTC 1 cut(s) 27
DriI GACNNNNNGTC 1 cut(s) 810
DseDI GACNNNNNNGTC 1 cut(s) 27
EaeI YGGCCR 1 cut(s) 1532
Eam1104I CTCTTC 2 cut(s) 1113, 1413
Eam1105I GACNNNNNGTC 1 cut(s) 810
EarI CTCTTC 2 cut(s) 1113, 1413
EciI GGCGGA 3 cut(s) 113, 832, 1311
Eco130I CCWWGG 2 cut(s) 2315, 2526
Eco47I GGWCC 5 cut(s) 1724, 1813, 1932, 2422, 2581
Eco57I CTGAAG 2 cut(s) 386, 624
Eco88I CYCGRG 1 cut(s) 66
EcoO109I RGGNCCY 2 cut(s) 1932, 2422
EcoRII CCWGG 2 cut(s) 357, 954
EcoT14I CCWWGG 2 cut(s) 2315, 2526
EcoT22I ATGCAT 1 cut(s) 2618
ErhI CCWWGG 2 cut(s) 2315, 2526
Esp3I CGTCTC 4 cut(s) 617, 1613, 1644, 2232
FalI AAGNNNNNCTT 2 cut(s) 1110, 1142
FaqI GGGAC 2 cut(s) 33, 1945
FauNDI CATATG 1 cut(s) 2612
FbaI TGATCA 2 cut(s) 1203, 2491
FblI GTMKAC 3 cut(s) 193, 1270, 2311
Fnu4HI GCNGC 2 cut(s) 2256, 2550
FokI GGATG 7 cut(s) 43, 780, 1462, 1575, 1733, 2062, 2347
Fsp4HI GCNGC 2 cut(s) 2256, 2550
FspI TGCGCA 1 cut(s) 2609
GlaI GCGC 2 cut(s) 363, 2609
GluI GCNGC 2 cut(s) 2256, 2550
GsaI CCCAGC 1 cut(s) 1736
GsuI CTGGAG 1 cut(s) 1808
HaeII RGCGCY 1 cut(s) 365
HaeIII GGCC 2 cut(s) 1534, 2195
HapII CCGG 2 cut(s) 2092, 2579
HgaI GACGC 2 cut(s) 634, 1966
HhaI GCGC 2 cut(s) 364, 2610
Hin1I GRCGYC 1 cut(s) 1637
Hin6I GCGC 2 cut(s) 362, 2608
HinP1I GCGC 2 cut(s) 362, 2608
HincII GTYRAC 1 cut(s) 54
HindII GTYRAC 1 cut(s) 54
HindIII AAGCTT 3 cut(s) 935, 1806, 2164
HpaII CCGG 2 cut(s) 2092, 2579
HphI GGTGA 1 cut(s) 1058
Hpy166II GTNNAC 7 cut(s) 54, 194, 495, 851, 1271, 1790, 2312
Hpy188I TCNGA 2 cut(s) 604, 2338
Hpy8I GTNNAC 7 cut(s) 54, 194, 495, 851, 1271, 1790, 2312
Hpy99I CGWCG 1 cut(s) 173
HpyAV CCTTC 7 cut(s) 509, 584, 878, 1222, 1458, 2098, 2206
HpyCH4III ACNGT 5 cut(s) 256, 511, 581, 1530, 2350
HpyCH4IV ACGT 5 cut(s) 171, 501, 1242, 1637, 2472
HpyF10VI GCNNNNNNNGC 5 cut(s) 359, 1779, 2255, 2584, 2601
HpyF3I CTNAG 4 cut(s) 616, 745, 2167, 2374
HpySE526I ACGT 5 cut(s) 171, 501, 1242, 1637, 2472
Hsp92I GRCGYC 1 cut(s) 1637
HspAI GCGC 2 cut(s) 362, 2608
KflI GGGWCCC 1 cut(s) 1932
Kpn2I TCCGGA 1 cut(s) 2091
Ksp22I TGATCA 2 cut(s) 1203, 2491
Kzo9I GATC 9 cut(s) 118, 599, 1203, 1738, 1984, 2394, 2491, 2554, 2589
LmnI GCTCC 1 cut(s) 518
Lsp1109I GCAGC 1 cut(s) 2536
LweI GCATC 7 cut(s) 81, 292, 688, 1073, 1906, 2236, 2242
MaeII ACGT 5 cut(s) 171, 501, 1242, 1637, 2472
MaeIII GTNAC 5 cut(s) 250, 748, 1298, 1471, 2368
MalI GATC 9 cut(s) 120, 601, 1205, 1740, 1986, 2396, 2493, 2556, 2591
MboI GATC 9 cut(s) 118, 599, 1203, 1738, 1984, 2394, 2491, 2554, 2589
MfeI CAATTG 1 cut(s) 1783
MflI RGATCY 2 cut(s) 599, 1984
MhlI GDGCHC 2 cut(s) 523, 1792
MlsI TGGCCA 1 cut(s) 1534
MluNI TGGCCA 1 cut(s) 1534
MlyI GAGTC 4 cut(s) 332, 1151, 1266, 2081
MmeI TCCRAC 2 cut(s) 555, 1270
Mox20I TGGCCA 1 cut(s) 1534
Mph1103I ATGCAT 1 cut(s) 2618
MroI TCCGGA 1 cut(s) 2091
MscI TGGCCA 1 cut(s) 1534
MslI CAYNNNNRTG 3 cut(s) 768, 1914, 2124
Msp20I TGGCCA 1 cut(s) 1534
MspA1I CMGCKG 1 cut(s) 1736
MspCI CTTAAG 1 cut(s) 307
MspI CCGG 2 cut(s) 2092, 2579
MspR9I CCNGG 2 cut(s) 359, 956
MunI CAATTG 1 cut(s) 1783
MvaI CCWGG 2 cut(s) 359, 956
MwoI GCNNNNNNNGC 5 cut(s) 359, 1779, 2255, 2584, 2601
NdeI CATATG 1 cut(s) 2612
NdeII GATC 9 cut(s) 118, 599, 1203, 1738, 1984, 2394, 2491, 2554, 2589
NlaIV GGNNCC 5 cut(s) 1626, 1933, 1934, 2423, 2532
NmuCI GTSAC 3 cut(s) 250, 1298, 2368
NsbI TGCGCA 1 cut(s) 2609
NsiI ATGCAT 1 cut(s) 2618
NspI RCATGY 4 cut(s) 632, 913, 2391, 2601
PaeI GCATGC 1 cut(s) 2391
PaeR7I CTCGAG 1 cut(s) 66
PagI TCATGA 1 cut(s) 1332
PciI ACATGT 1 cut(s) 2597
PfeI GAWTC 7 cut(s) 704, 963, 1492, 1670, 2095, 2299, 2513
PflFI GACNNNGTC 2 cut(s) 104, 1960
PflMI CCANNNNNTGG 1 cut(s) 1981
PkrI GCNGC 2 cut(s) 2257, 2551
PleI GAGTC 4 cut(s) 332, 1150, 1266, 2080
PpsI GAGTC 4 cut(s) 332, 1150, 1266, 2080
PpuMI RGGWCCY 2 cut(s) 1932, 2422
PscI ACATGT 1 cut(s) 2597
Psp5II RGGWCCY 2 cut(s) 1932, 2422
Psp6I CCWGG 2 cut(s) 357, 954
PspFI CCCAGC 1 cut(s) 1732
PspGI CCWGG 2 cut(s) 357, 954
PspN4I GGNNCC 5 cut(s) 1626, 1933, 1934, 2423, 2532
PspPI GGNCC 5 cut(s) 1724, 1813, 1932, 2422, 2581
PspPPI RGGWCCY 2 cut(s) 1932, 2422
PsuI RGATCY 2 cut(s) 599, 1984
PsyI GACNNNGTC 2 cut(s) 104, 1960
RsaI GTAC 2 cut(s) 819, 2115
RsaNI GTAC 2 cut(s) 818, 2114
RseI CAYNNNNRTG 3 cut(s) 768, 1914, 2124
SatI GCNGC 2 cut(s) 2256, 2550
Sau3AI GATC 9 cut(s) 118, 599, 1203, 1738, 1984, 2394, 2491, 2554, 2589
Sau96I GGNCC 5 cut(s) 1724, 1813, 1932, 2422, 2581
SchI GAGTC 4 cut(s) 332, 1151, 1266, 2081
ScrFI CCNGG 2 cut(s) 359, 956
SduI GDGCHC 2 cut(s) 523, 1792
SfaNI GCATC 7 cut(s) 81, 292, 688, 1073, 1906, 2236, 2242
SfcI CTRYAG 1 cut(s) 708
Sfr274I CTCGAG 1 cut(s) 66
SinI GGWCC 5 cut(s) 1724, 1813, 1932, 2422, 2581
SlaI CTCGAG 1 cut(s) 66
SmiMI CAYNNNNRTG 3 cut(s) 768, 1914, 2124
SmlI CTYRAG 4 cut(s) 66, 307, 1274, 2036
SmoI CTYRAG 4 cut(s) 66, 307, 1274, 2036
SphI GCATGC 1 cut(s) 2391
SsiI CCGC 7 cut(s) 98, 423, 843, 1322, 1736, 2079, 2256
SspI AATATT 2 cut(s) 700, 901
StyD4I CCNGG 2 cut(s) 357, 954
StyI CCWWGG 2 cut(s) 2315, 2526
TaaI ACNGT 5 cut(s) 256, 511, 581, 1530, 2350
TaiI ACGT 5 cut(s) 174, 504, 1245, 1640, 2475
TaqI TCGA 4 cut(s) 67, 341, 1680, 2203
TaqII GACCGA 1 cut(s) 1801
TatI WGTACW 1 cut(s) 817
TauI GCSGC 1 cut(s) 2258
TfiI GAWTC 7 cut(s) 704, 963, 1492, 1670, 2095, 2299, 2513
TscAI CASTG 5 cut(s) 516, 546, 586, 1535, 2160
TseFI GTSAC 3 cut(s) 250, 1298, 2368
TseI GCWGC 1 cut(s) 2549
Tsp45I GTSAC 3 cut(s) 250, 1298, 2368
TspDTI ATGAA 5 cut(s) 906, 1030, 1110, 1185, 1985
TspGWI ACGGA 7 cut(s) 981, 1135, 1384, 1468, 1637, 1954, 2356
TspRI CASTG 5 cut(s) 516, 546, 586, 1535, 2160
Tth111I GACNNNGTC 2 cut(s) 104, 1960
Van91I CCANNNNNTGG 1 cut(s) 1981
Vha464I CTTAAG 1 cut(s) 307
VneI GTGCAC 1 cut(s) 1788
VpaK11BI GGWCC 5 cut(s) 1724, 1813, 1932, 2422, 2581
XapI RAATTY 8 cut(s) 45, 199, 782, 1578, 1592, 1713, 2023, 2354
XbaI TCTAGA 2 cut(s) 832, 1987
XceI RCATGY 4 cut(s) 632, 913, 2391, 2601
XhoI CTCGAG 1 cut(s) 66
XmiI GTMKAC 3 cut(s) 193, 1270, 2311
ZraI GACGTC 1 cut(s) 1638
Zsp2I ATGCAT 1 cut(s) 2618
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.