Rmu_sc0014155.1_g000001

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014155.1
OG0000042
Physical Location & Seq
Reverse (-)
1 .. 2323
2323 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014155.1_g000001.1.cds

Sequence Viewer

Length: 1185 bp
atgcaatggagttttagaatggtccactcccagcagcagcgtggaaacagcactagtgatgcaattgggacccaacagcagcagcaactcccacatttaaaagagttgaggcttgttcgaatggagaagctgatgcaactaggccaggatgatgaaaaggataactcacaatcagccccccgcatcccaaattttccaaacctgcaaattctattagtgaatgcttgccatagcttaaggaatctgatatcatcattaatatccttcaagaatctaacaactttccaagtaagtgtttgctacggattgaaatacttgataacttactccatggccaagagtttaatgcaactcacaaaactggaagttgagttttgcccaagactagtggaaatagtgggaagcaatgaagacgatgattcaagaaatgagattacattcaagcgcttgaaacatctaaaactattttgtctaccaagactgcaaggtttttgctccggaaattgcattgctaaatttccgtccttggaaactacaaccatgagcaaccgcctcaagttgaagattttcacagctcatgaccaaatgctacagctaacaaacgaagaggcagacacagataaaaagtgcgaacgtcactcctcctgccacgatcaagcgtcggcggcgcagcttgccggagggacgccggggaaaaagtgcgaacgtcactcctcctgccacgatcaagcgtcggcggcgcaacttgccggagggacaccgggggtctgcggagctgatatgccatccggtggagtcaccggcgagcgttctgcatggctgcaaagaacctgcaactgcagcttcagatccttgctctatatatatatattcacgctttctatacatgaaatgctgatttgcgactatctgtgtggtatttctagaggagtcgaggagtcggttgctatggatgaaatgaattcggcaatacatgcagaaatacatggagttagggatggaatcctcccacatttaagagggttgaacctttacgaaatgcggaagctgatgaatcttggggaggataacttcggaccatcatgcccatattcaaatctggaaattctgaagatagatgactatgatagcttaaagaacttaaaaccaaccaaaatattcttcaaaaatctaaccactttgcaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

395

Amino Acids

44.44

Weight (kDa)

7.52

Isoelectric Point (pI)

40.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000042)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07760 FvH4_1g18111 FvH4_1g18121 FvH4_1g18142 FvH4_1g18160 FvH4_3g04780 FvH4_3g04780 FvH4_3g04780 FvH4_3g05070 FvH4_3g29991 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06020 FvH4_4g06021 FvH4_4g06022 FvH4_4g10330 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g02660 FvH4_5g05380 FvH4_5g18950 FvH4_5g18991 FvH4_5g18992 FvH4_6g53580 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140 FvH4_7g31140
malus_domestica MD08G1082300.v1.1 MD08G1083200.v1.1 MD08G1083600.v1.1 MD08G1083700.v1.1 MD09G1272000.v1.1 MD09G1272400.v1.1 MD09G1272500.v1.1 MD09G1272700.v1.1 MD09G1272800.v1.1 MD09G1273400.v1.1 MD09G1273700.v1.1 MD09G1274000.v1.1 MD09G1274100.v1.1 MD09G1274200.v1.1 MD09G1274400.v1.1 MD11G1203100.v1.1 MD13G1197600.v1.1 MD15G1069900.v1.1 MD15G1070000.v1.1
prunus_persica Prupe.3G016600_v2.0.a1 Prupe.3G016700_v2.0.a1 Prupe.4G236500_v2.0.a1
pyrus_communis pycom08g06810 pycom08g06820 pycom08g06830 pycom08g06850 pycom08g06860 pycom08g06870 pycom08g06900 pycom08g06910 pycom08g06920 pycom08g06950 pycom09g18250 pycom09g18300 pycom09g18310 pycom09g18340 pycom09g18360 pycom09g18390 pycom09g18410 pycom09g18420 pycom09g18470 pycom09g18510 pycom11g17610 pycom15g06550 pycom15g06560 pycom15g06570 pycom15g06590 pycom15g06600
rosa_chinensis RchiOBHm_Chr1g0356991 RchiOBHm_Chr1g0357001 RchiOBHm_Chr2g0085061 RchiOBHm_Chr2g0085071 RchiOBHm_Chr2g0085111 RchiOBHm_Chr2g0085121 RchiOBHm_Chr2g0108611 RchiOBHm_Chr2g0109281 RchiOBHm_Chr4g0396311 RchiOBHm_Chr4g0397551 RchiOBHm_Chr4g0397781 RchiOBHm_Chr4g0397831 RchiOBHm_Chr4g0397841 RchiOBHm_Chr4g0397871 RchiOBHm_Chr4g0397911 RchiOBHm_Chr4g0397921 RchiOBHm_Chr4g0398201 RchiOBHm_Chr4g0398211 RchiOBHm_Chr4g0408401 RchiOBHm_Chr5g0016101 RchiOBHm_Chr5g0016111 RchiOBHm_Chr5g0016321 RchiOBHm_Chr5g0016331 RchiOBHm_Chr5g0016341 RchiOBHm_Chr5g0016351 RchiOBHm_Chr7g0203341 RchiOBHm_Chr7g0203371 RchiOBHm_Chr7g0203421 RchiOBHm_Chr7g0204211 RchiOBHm_Chr7g0204231 RchiOBHm_Chr7g0236741
rosa_laevigata RLG00000001063 RLG00000009379 RLG00000009397 RLG00000009399 RLG00000009402 RLG00000009403 RLG00000009407 RLG00000009411 RLG00000009429 RLG00000009550 RLG00000009551 RLG00000015657 RLG00000017681 RLG00000028063 RLG00000028065 RLG00000028066 RLG00000032242 RLG00000032245 RLG00000035025 RLG00000035026 RLG00000035027 RLG00000035031
rosa_multiflora Rmu_co7992674.1_g000001 Rmu_co8252071.1_g000001 Rmu_co8481849.1_g000001 Rmu_sc0000166.1_g000026 Rmu_sc0000166.1_g000032 Rmu_sc0000166.1_g000036 Rmu_sc0000299.1_g000001 Rmu_sc0000332.1_g000001 Rmu_sc0000361.1_g000022 Rmu_sc0000361.1_g000023 Rmu_sc0000361.1_g000024 Rmu_sc0000361.1_g000034 Rmu_sc0000361.1_g000053 Rmu_sc0000571.1_g000009 Rmu_sc0000777.1_g000005 Rmu_sc0000777.1_g000013 Rmu_sc0000787.1_g000002 Rmu_sc0000795.1_g000061 Rmu_sc0000795.1_g000068 Rmu_sc0001074.1_g000012 Rmu_sc0001074.1_g000024 Rmu_sc0001196.1_g000010 Rmu_sc0001196.1_g000013 Rmu_sc0001235.1_g000035 Rmu_sc0001320.1_g000009 Rmu_sc0001320.1_g000010 Rmu_sc0001588.1_g000017 Rmu_sc0001779.1_g000028 Rmu_sc0001807.1_g000009 Rmu_sc0001959.1_g000001 Rmu_sc0001959.1_g000003 Rmu_sc0001959.1_g000004 Rmu_sc0001959.1_g000025 Rmu_sc0002148.1_g000007 Rmu_sc0002148.1_g000013 Rmu_sc0002212.1_g000007 Rmu_sc0002321.1_g000015 Rmu_sc0002460.1_g000018 Rmu_sc0002540.1_g000008 Rmu_sc0002647.1_g000001 Rmu_sc0003347.1_g000005 Rmu_sc0003347.1_g000013 Rmu_sc0003582.1_g000009 Rmu_sc0003720.1_g000025 Rmu_sc0004527.1_g000001 Rmu_sc0004557.1_g000001 Rmu_sc0004595.1_g000015 Rmu_sc0004595.1_g000020 Rmu_sc0004834.1_g000001 Rmu_sc0004904.1_g000029 Rmu_sc0005276.1_g000007 Rmu_sc0005276.1_g000008 Rmu_sc0005276.1_g000010 Rmu_sc0005276.1_g000019 Rmu_sc0005506.1_g000016 Rmu_sc0005723.1_g000003 Rmu_sc0005766.1_g000006 Rmu_sc0006749.1_g000001 Rmu_sc0006749.1_g000002 Rmu_sc0006985.1_g000001 Rmu_sc0007032.1_g000011 Rmu_sc0007315.1_g000007 Rmu_sc0007574.1_g000003 Rmu_sc0008179.1_g000001 Rmu_sc0008179.1_g000002 Rmu_sc0008208.1_g000001 Rmu_sc0008647.1_g000014 Rmu_sc0008647.1_g000016 Rmu_sc0009960.1_g000001 Rmu_sc0010313.1_g000013 Rmu_sc0010376.1_g000001 Rmu_sc0012840.1_g000006 Rmu_sc0013807.1_g000003 Rmu_sc0013807.1_g000004 Rmu_sc0013807.1_g000005 Rmu_sc0014155.1_g000001 Rmu_sc0015959.1_g000003 Rmu_sc0015959.1_g000004 Rmu_sc0016628.1_g000001 Rmu_sc0018579.1_g000001 Rmu_sc0019842.1_g000001 Rmu_sc0022243.1_g000001 Rmu_sc0022243.1_g000002 Rmu_sc0023640.1_g000001 Rmu_sc0028411.1_g000001 Rmu_sc0033723.1_g000001 Rmu_sc0038038.1_g000001 Rmu_sc0039543.1_g000001 Rmu_sc0040505.1_g000001 Rmu_sc0043049.1_g000001 Rmu_ssc0000234.1_g000013
rosa_roxburghii Rroxscaffold_1G00024370 Rroxscaffold_1G00024400 Rroxscaffold_1G00024420 Rroxscaffold_1G00039110 Rroxscaffold_1G00060530 Rroxscaffold_1G00060560 Rroxscaffold_2G00132370 Rroxscaffold_2G00134940 Rroxscaffold_2G00134960 Rroxscaffold_2G00155630 Rroxscaffold_3G00253360 Rroxscaffold_3G00253840 Rroxscaffold_3G00253850 Rroxscaffold_4G00299140 Rroxscaffold_4G00299150 Rroxscaffold_5G00341140 Rroxscaffold_5G00341150 Rroxscaffold_5G00342380 Rroxscaffold_5G00342390 Rroxscaffold_5G00342580 Rroxscaffold_5G00342590 Rroxscaffold_5G00342600 Rroxscaffold_5G00342620 Rroxscaffold_5G00342640 Rroxscaffold_5G00342670 Rroxscaffold_5G00342680 Rroxscaffold_5G00342720 Rroxscaffold_5G00342750 Rroxscaffold_5G00342760 Rroxscaffold_5G00342770 Rroxscaffold_5G00342780 Rroxscaffold_5G00342790 Rroxscaffold_5G00342820 Rroxscaffold_5G00342880
rosa_rugosa Rorug01G0064000 Rorug01G0252600 Rorug01G0252700 Rorug01G0252900 Rorug01G0253000 Rorug01G0457800 Rorug02G0154700 Rorug02G0154800 Rorug02G0159000 Rorug03G0342700 Rorug03G0350300 Rorug04G0004400 Rorug05G0031200 Rorug05G0031300 Rorug05G0031400 Rorug05G0031800 Rorug05G0295400 Rorug05G0295500 Rorug07G0075800.1 Rorug07G0075900 Rorug07G0076000
rosa_samantha Rh1AG267100 Rh1BG234600 Rh1BG234800 Rh1BG234900 Rh1CG250500 Rh1CG250900 Rh1CG251100 Rh1DG262000 Rh1DG262200 Rh1DG262300 Rh2AG005800 Rh2AG006000 Rh2AG203700 Rh2AG204000 Rh2AG204400 Rh2AG210500 Rh2AG210600 Rh2BG006700 Rh2BG216500 Rh2BG220800 Rh2CG007100 Rh2CG007200 Rh2CG007400 Rh2CG007500 Rh2CG207700 Rh2CG212800 Rh2DG007100 Rh2DG007500 Rh2DG210800 Rh2DG216700 Rh2DG216800 Rh4AG078900 Rh4AG079000 Rh4AG080700 Rh4AG081300 Rh4AG084000 Rh4AG150000 Rh4BG066400 Rh4BG074400 Rh4BG074500 Rh4BG074900 Rh4BG075200 Rh4BG075300 Rh4BG075900 Rh4BG076700 Rh4BG078500 Rh4BG078600 Rh4BG078700 Rh4BG081500 Rh4CG073200 Rh4CG081000 Rh4CG084300 Rh4CG084400 Rh4CG084500 Rh4CG087200 Rh4CG087300 Rh4CG087800 Rh4CG088200 Rh4CG088900 Rh4CG091200 Rh4CG157300 Rh4DG063300 Rh4DG073700 Rh4DG074000 Rh4DG074100 Rh4DG074200 Rh4DG074300 Rh4DG142800 Rh5AG124600 Rh5AG125000 Rh5AG125100 Rh5AG125200 Rh5AG125300 Rh5AG367000 Rh5AG367100 Rh5AG367200 Rh5AG367300 Rh5AG367400 Rh5BG123600 Rh5BG123800 Rh5BG124300 Rh5BG377200 Rh5BG377500 Rh5CG135300 Rh5CG136400 Rh5CG136500 Rh5CG400600 Rh5CG400700 Rh5CG400800 Rh5DG122900 Rh5DG123000 Rh5DG124000 Rh5DG389900 Rh5DG390200 Rh5DG390700 Rh5DG390800 Rh7AG205300 Rh7AG210900 Rh7AG211500 Rh7AG221400 Rh7BG205100 Rh7BG209200 Rh7BG209400 Rh7BG425000 Rh7BG425100 Rh7CG216600 Rh7CG217200 Rh7CG217300 Rh7CG217700 Rh7DG115300 Rh7DG211800 Rh7DG212400 Rh7DG217600 Rh7DG218400
rosa_wichuraiana Rw0G002820 Rw0G003970 Rw0G003980 Rw0G015020 Rw0G018950 Rw0G020820 Rw0G021460 Rw0G021470 Rw1G023590 Rw1G023600 Rw2G000530 Rw2G000550 Rw2G016290 Rw4G005460 Rw4G006420 Rw4G006430 Rw4G006620 Rw4G006660 Rw4G006670 Rw4G006700 Rw4G006710 Rw4G006750 Rw4G006990 Rw4G007000 Rw4G012240 Rw5G010800 Rw5G010840 Rw5G010860 Rw5G034410 Rw5G034450 Rw5G034460 Rw7G017900 Rw7G017910 Rw7G017930 Rw7G019140 Rw7G037710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 210, 839
AccB7I CCANNNNNTGG 1 cut(s) 791
AccI GTMKAC 1 cut(s) 472
AccIII TCCGGA 1 cut(s) 497
AciI CCGC 6 cut(s) 181, 550, 665, 737, 771, 1042
AclWI GGATC 1 cut(s) 843
AcoI YGGCCR 1 cut(s) 333
AcsI RAATTY 5 cut(s) 190, 207, 515, 961, 1104
AcuI CTGAAG 2 cut(s) 829, 1130
AcyI GRCGYC 1 cut(s) 686
AfeI AGCGCT 1 cut(s) 446
AfiI CCNNNNNNNGG 1 cut(s) 791
AflII CTTAAG 1 cut(s) 235
AgsI TTSAA 9 cut(s) 268, 310, 423, 442, 451, 562, 1027, 1095, 1165
AhlI ACTAGT 2 cut(s) 53, 385
AjnI CCWGG 1 cut(s) 144
AjuI GAANNNNNNNTTGG 2 cut(s) 1145, 1177
AluBI AGCT 9 cut(s) 130, 234, 575, 595, 673, 776, 843, 1048, 1131
AluI AGCT 9 cut(s) 130, 234, 575, 595, 673, 776, 843, 1048, 1131
AlwI GGATC 1 cut(s) 843
Aor13HI TCCGGA 1 cut(s) 497
Aor51HI AGCGCT 1 cut(s) 446
AoxI GGCC 2 cut(s) 142, 333
ApeKI GCWGC 7 cut(s) 34, 37, 79, 82, 670, 820, 840
ApoI RAATTY 5 cut(s) 190, 207, 515, 961, 1104
AseI ATTAAT 1 cut(s) 257
Asp700I GAANNNNTTC 1 cut(s) 566
AspLEI GCGC 3 cut(s) 447, 670, 742
AspS9I GGNCC 3 cut(s) 22, 69, 1076
AsuC2I CCSGG 2 cut(s) 690, 762
AsuHPI GGTGA 1 cut(s) 790
AsuII TTCGAA 1 cut(s) 118
AvaII GGWCC 3 cut(s) 22, 69, 1076
BalI TGGCCA 1 cut(s) 335
BbsI GAAGAC 1 cut(s) 417
BbvI GCAGC 7 cut(s) 46, 49, 91, 94, 682, 807, 852
BccI CCATC 3 cut(s) 793, 992, 1087
BcgI CGANNNNNNTGC 2 cut(s) 794, 828
BciT130I CCWGG 1 cut(s) 146
BcnI CCSGG 2 cut(s) 690, 762
BcuI ACTAGT 2 cut(s) 53, 385
BfaI CTAG 4 cut(s) 54, 140, 386, 924
BfmI CTRYAG 2 cut(s) 590, 838
BfoI RGCGCY 1 cut(s) 448
BfrI CTTAAG 1 cut(s) 235
BfuAI ACCTGC 2 cut(s) 210, 839
BisI GCNGC 9 cut(s) 35, 38, 80, 83, 666, 671, 738, 821, 841
BlsI GCNGC 9 cut(s) 36, 39, 81, 84, 667, 672, 739, 822, 842
Bme1390I CCNGG 3 cut(s) 146, 690, 762
Bme18I GGWCC 3 cut(s) 22, 69, 1076
BmgT120I GGNCC 3 cut(s) 22, 69, 1076
BmiI GGNNCC 2 cut(s) 70, 71
BmrFI CCNGG 3 cut(s) 146, 690, 762
BmsI GCATC 3 cut(s) 49, 123, 192
BpiI GAAGAC 1 cut(s) 417
Bpu14I TTCGAA 1 cut(s) 118
BpuEI CTTGAG 1 cut(s) 539
BpuMI CCSGG 2 cut(s) 690, 762
BsaHI GRCGYC 1 cut(s) 686
BsaJI CCNNGG 4 cut(s) 330, 525, 689, 761
BsaWI WCCGGW 2 cut(s) 497, 788
Bsc4I CCNNNNNNNGG 1 cut(s) 791
Bse118I RCCGGY 1 cut(s) 800
Bse1I ACTGG 1 cut(s) 366
Bse3DI GCAATG 3 cut(s) 11, 412, 507
BseAI TCCGGA 1 cut(s) 497
BseBI CCWGG 1 cut(s) 146
BseDI CCNNGG 4 cut(s) 330, 525, 689, 761
BseGI GGATG 5 cut(s) 154, 183, 785, 958, 1003
BseLI CCNNNNNNNGG 1 cut(s) 791
BseMI GCAATG 3 cut(s) 11, 412, 507
BseNI ACTGG 1 cut(s) 366
BseRI GAGGAG 4 cut(s) 631, 703, 942, 950
BseXI GCAGC 7 cut(s) 46, 49, 91, 94, 682, 807, 852
BseYI CCCAGC 1 cut(s) 30
BshFI GGCC 2 cut(s) 144, 335
BsiSI CCGG 7 cut(s) 498, 678, 689, 750, 761, 789, 801
BslFI GGGAC 3 cut(s) 82, 697, 769
BslI CCNNNNNNNGG 1 cut(s) 791
BsmFI GGGAC 3 cut(s) 82, 697, 769
BsmI GAATGC 1 cut(s) 226
BsnI GGCC 2 cut(s) 144, 335
Bsp119I TTCGAA 1 cut(s) 118
Bsp13I TCCGGA 1 cut(s) 497
Bsp143I GATC 3 cut(s) 652, 724, 848
Bsp19I CCATGG 1 cut(s) 330
BspACI CCGC 6 cut(s) 181, 550, 665, 737, 771, 1042
BspANI GGCC 2 cut(s) 144, 335
BspEI TCCGGA 1 cut(s) 497
BspHI TCATGA 1 cut(s) 577
BspLI GGNNCC 2 cut(s) 70, 71
BspMAI CTGCAG 1 cut(s) 842
BspMI ACCTGC 2 cut(s) 210, 839
BspPI GGATC 1 cut(s) 843
BspT104I TTCGAA 1 cut(s) 118
BspTI CTTAAG 1 cut(s) 235
BsrDI GCAATG 3 cut(s) 11, 412, 507
BsrFI RCCGGY 1 cut(s) 800
BsrI ACTGG 1 cut(s) 366
BssAI RCCGGY 1 cut(s) 800
BssECI CCNNGG 4 cut(s) 330, 525, 689, 761
BssMI GATC 3 cut(s) 652, 724, 848
BssNI GRCGYC 1 cut(s) 686
BssT1I CCWWGG 2 cut(s) 330, 525
Bst2UI CCWGG 1 cut(s) 146
Bst6I CTCTTC 1 cut(s) 600
BstACI GRCGYC 1 cut(s) 686
BstAFI CTTAAG 1 cut(s) 235
BstAPI GCANNNNNTGC 1 cut(s) 974
BstBI TTCGAA 1 cut(s) 118
BstC8I GCNNGC 3 cut(s) 226, 675, 806
BstDSI CCRYGG 1 cut(s) 330
BstF5I GGATG 5 cut(s) 154, 183, 785, 958, 1003
BstH2I RGCGCY 1 cut(s) 448
BstHHI GCGC 3 cut(s) 447, 670, 742
BstKTI GATC 3 cut(s) 655, 727, 851
BstMBI GATC 3 cut(s) 652, 724, 848
BstMWI GCNNNNNNNGC 6 cut(s) 665, 674, 737, 746, 840, 974
BstNI CCWGG 1 cut(s) 146
BstNSI RCATGY 1 cut(s) 977
BstSCI CCNGG 3 cut(s) 144, 688, 760
BstSFI CTRYAG 2 cut(s) 590, 838
BstV1I GCAGC 7 cut(s) 46, 49, 91, 94, 682, 807, 852
BstV2I GAAGAC 1 cut(s) 417
BstX2I RGATCY 1 cut(s) 848
BstYI RGATCY 1 cut(s) 848
BsuRI GGCC 2 cut(s) 144, 335
BtgI CCRYGG 1 cut(s) 330
BtsCI GGATG 5 cut(s) 154, 183, 785, 958, 1003
BveI ACCTGC 2 cut(s) 210, 839
Cac8I GCNNGC 3 cut(s) 226, 675, 806
CciI TCATGA 1 cut(s) 577
CfoI GCGC 3 cut(s) 447, 670, 742
Cfr10I RCCGGY 1 cut(s) 800
Cfr13I GGNCC 3 cut(s) 22, 69, 1076
CseI GACGC 3 cut(s) 648, 694, 720
CspCI CAANNNNNGTGG 2 cut(s) 369, 404
CviAII CATG 8 cut(s) 331, 541, 578, 816, 887, 974, 986, 1083
DpnI GATC 3 cut(s) 654, 726, 850
DpnII GATC 3 cut(s) 652, 724, 848
DraI TTTAAA 1 cut(s) 99
EaeI YGGCCR 1 cut(s) 333
Eam1104I CTCTTC 1 cut(s) 600
EarI CTCTTC 1 cut(s) 600
Eco130I CCWWGG 2 cut(s) 330, 525
Eco32I GATATC 1 cut(s) 249
Eco47I GGWCC 3 cut(s) 22, 69, 1076
Eco47III AGCGCT 1 cut(s) 446
Eco57I CTGAAG 2 cut(s) 829, 1130
EcoO109I RGGNCCY 1 cut(s) 69
EcoRI GAATTC 1 cut(s) 961
EcoRII CCWGG 1 cut(s) 144
EcoRV GATATC 1 cut(s) 249
EcoT14I CCWWGG 2 cut(s) 330, 525
ErhI CCWWGG 2 cut(s) 330, 525
FaeI CATG 8 cut(s) 334, 544, 581, 819, 890, 977, 989, 1086
FaqI GGGAC 3 cut(s) 82, 697, 769
FatI CATG 8 cut(s) 330, 540, 577, 815, 886, 973, 985, 1082
FauI CCCGC 1 cut(s) 188
FblI GTMKAC 1 cut(s) 472
Fnu4HI GCNGC 9 cut(s) 35, 38, 80, 83, 666, 671, 738, 821, 841
FokI GGATG 5 cut(s) 161, 170, 772, 965, 1010
Fsp4HI GCNGC 9 cut(s) 35, 38, 80, 83, 666, 671, 738, 821, 841
FspBI CTAG 4 cut(s) 54, 140, 386, 924
GlaI GCGC 3 cut(s) 446, 669, 741
GluI GCNGC 9 cut(s) 35, 38, 80, 83, 666, 671, 738, 821, 841
GsaI CCCAGC 1 cut(s) 34
HaeII RGCGCY 1 cut(s) 448
HaeIII GGCC 2 cut(s) 144, 335
HapII CCGG 7 cut(s) 498, 678, 689, 750, 761, 789, 801
HgaI GACGC 3 cut(s) 648, 694, 720
HhaI GCGC 3 cut(s) 447, 670, 742
Hin1I GRCGYC 1 cut(s) 686
Hin1II CATG 8 cut(s) 334, 544, 581, 819, 890, 977, 989, 1086
Hin6I GCGC 3 cut(s) 445, 668, 740
HinP1I GCGC 3 cut(s) 445, 668, 740
HinfI GANTC 8 cut(s) 241, 271, 419, 795, 930, 938, 1002, 1054
HpaII CCGG 7 cut(s) 498, 678, 689, 750, 761, 789, 801
HphI GGTGA 1 cut(s) 790
Hpy166II GTNNAC 2 cut(s) 25, 473
Hpy188I TCNGA 4 cut(s) 246, 848, 1076, 1110
Hpy188III TCNNGA 6 cut(s) 268, 423, 498, 578, 924, 1100
Hpy8I GTNNAC 2 cut(s) 25, 473
Hpy99I CGWCG 2 cut(s) 664, 736
HpyAV CCTTC 1 cut(s) 274
HpyCH4IV ACGT 2 cut(s) 634, 706
HpyF10VI GCNNNNNNNGC 6 cut(s) 665, 674, 737, 746, 840, 974
HpySE526I ACGT 2 cut(s) 634, 706
Hsp92I GRCGYC 1 cut(s) 686
Hsp92II CATG 8 cut(s) 334, 544, 581, 819, 890, 977, 989, 1086
HspAI GCGC 3 cut(s) 445, 668, 740
KflI GGGWCCC 1 cut(s) 69
Kpn2I TCCGGA 1 cut(s) 497
Kzo9I GATC 3 cut(s) 652, 724, 848
LmnI GCTCC 2 cut(s) 500, 773
Lsp1109I GCAGC 7 cut(s) 46, 49, 91, 94, 682, 807, 852
LweI GCATC 3 cut(s) 49, 123, 192
MaeI CTAG 4 cut(s) 54, 140, 386, 924
MaeII ACGT 2 cut(s) 634, 706
MaeIII GTNAC 3 cut(s) 635, 707, 796
MalI GATC 3 cut(s) 654, 726, 850
MboI GATC 3 cut(s) 652, 724, 848
MboII GAAGA 5 cut(s) 422, 574, 617, 1123, 1153
MfeI CAATTG 1 cut(s) 63
MflI RGATCY 1 cut(s) 848
MlsI TGGCCA 1 cut(s) 335
MluCI AATT 7 cut(s) 63, 190, 207, 502, 515, 961, 1104
MluNI TGGCCA 1 cut(s) 335
MlyI GAGTC 3 cut(s) 804, 939, 947
Mox20I TGGCCA 1 cut(s) 335
MroI TCCGGA 1 cut(s) 497
MroXI GAANNNNTTC 1 cut(s) 566
MscI TGGCCA 1 cut(s) 335
MseI TTAA 7 cut(s) 98, 236, 257, 344, 1016, 1133, 1142
Msp20I TGGCCA 1 cut(s) 335
MspCI CTTAAG 1 cut(s) 235
MspI CCGG 7 cut(s) 498, 678, 689, 750, 761, 789, 801
MspR9I CCNGG 3 cut(s) 146, 690, 762
MunI CAATTG 1 cut(s) 63
Mva1269I GAATGC 1 cut(s) 226
MvaI CCWGG 1 cut(s) 146
MwoI GCNNNNNNNGC 6 cut(s) 665, 674, 737, 746, 840, 974
NciI CCSGG 2 cut(s) 690, 762
NcoI CCATGG 1 cut(s) 330
NdeII GATC 3 cut(s) 652, 724, 848
NlaIII CATG 8 cut(s) 334, 544, 581, 819, 890, 977, 989, 1086
NlaIV GGNNCC 2 cut(s) 70, 71
NmuCI GTSAC 3 cut(s) 635, 707, 796
NspI RCATGY 1 cut(s) 977
NspV TTCGAA 1 cut(s) 118
PagI TCATGA 1 cut(s) 577
PctI GAATGC 1 cut(s) 226
PdmI GAANNNNTTC 1 cut(s) 566
PfeI GAWTC 5 cut(s) 241, 271, 419, 1002, 1054
PflMI CCANNNNNTGG 1 cut(s) 791
PkrI GCNGC 9 cut(s) 36, 39, 81, 84, 667, 672, 739, 822, 842
PleI GAGTC 3 cut(s) 803, 938, 946
PpsI GAGTC 3 cut(s) 803, 938, 946
PpuMI RGGWCCY 1 cut(s) 69
PshBI ATTAAT 1 cut(s) 257
Psp5II RGGWCCY 1 cut(s) 69
Psp6I CCWGG 1 cut(s) 144
PspFI CCCAGC 1 cut(s) 30
PspGI CCWGG 1 cut(s) 144
PspN4I GGNNCC 2 cut(s) 70, 71
PspPI GGNCC 3 cut(s) 22, 69, 1076
PspPPI RGGWCCY 1 cut(s) 69
PstI CTGCAG 1 cut(s) 842
PsuI RGATCY 1 cut(s) 848
SaqAI TTAA 7 cut(s) 98, 236, 257, 344, 1016, 1133, 1142
SatI GCNGC 9 cut(s) 35, 38, 80, 83, 666, 671, 738, 821, 841
Sau3AI GATC 3 cut(s) 652, 724, 848
Sau96I GGNCC 3 cut(s) 22, 69, 1076
SchI GAGTC 3 cut(s) 804, 939, 947
ScrFI CCNGG 3 cut(s) 146, 690, 762
SfaNI GCATC 3 cut(s) 49, 123, 192
SfcI CTRYAG 2 cut(s) 590, 838
SfuI TTCGAA 1 cut(s) 118
SgrAI CRCCGGYG 1 cut(s) 800
SinI GGWCC 3 cut(s) 22, 69, 1076
SmlI CTYRAG 2 cut(s) 235, 554
SmoI CTYRAG 2 cut(s) 235, 554
SpeI ACTAGT 2 cut(s) 53, 385
Sse9I AATT 7 cut(s) 63, 190, 207, 502, 515, 961, 1104
SsiI CCGC 6 cut(s) 181, 550, 665, 737, 771, 1042
SspI AATATT 1 cut(s) 1158
SspMI CTAG 4 cut(s) 54, 140, 386, 924
StyD4I CCNGG 3 cut(s) 144, 688, 760
StyI CCWWGG 2 cut(s) 330, 525
TaiI ACGT 2 cut(s) 637, 709
TaqI TCGA 2 cut(s) 118, 933
TasI AATT 7 cut(s) 63, 190, 207, 502, 515, 961, 1104
TauI GCSGC 2 cut(s) 668, 740
TfiI GAWTC 5 cut(s) 241, 271, 419, 1002, 1054
Tru1I TTAA 7 cut(s) 98, 236, 257, 344, 1016, 1133, 1142
Tru9I TTAA 7 cut(s) 98, 236, 257, 344, 1016, 1133, 1142
TseFI GTSAC 3 cut(s) 635, 707, 796
TseI GCWGC 7 cut(s) 34, 37, 79, 82, 670, 820, 840
Tsp45I GTSAC 3 cut(s) 635, 707, 796
TspDTI ATGAA 6 cut(s) 168, 423, 903, 969, 974, 1067
TspGWI ACGGA 2 cut(s) 318, 510
Van91I CCANNNNNTGG 1 cut(s) 791
Vha464I CTTAAG 1 cut(s) 235
VpaK11BI GGWCC 3 cut(s) 22, 69, 1076
VspI ATTAAT 1 cut(s) 257
XapI RAATTY 5 cut(s) 190, 207, 515, 961, 1104
XbaI TCTAGA 1 cut(s) 923
XceI RCATGY 1 cut(s) 977
XcmI CCANNNNNNNNNTGG 1 cut(s) 38
XmiI GTMKAC 1 cut(s) 472
XmnI GAANNNNTTC 1 cut(s) 566
XspI CTAG 4 cut(s) 54, 140, 386, 924
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.