disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 162 - 323 | 5.5e-31 | NB-ARC domain |
| AAA_22 | PF13401 | 177 - 265 | 6.4e-06 | AAA domain |
| LRR_14 | PF23598 | 592 - 690 | 4.8e-08 | Leucine-rich repeat region |
| LRR_RPS2 | PF23247 | 749 - 865 | 3.8e-15 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 808 - 903 | 2.8e-14 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 946 - 1065 | 2.4e-16 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 953 |
| AatII | GACGTC | 1 cut(s) | 216 |
| Acc36I | ACCTGC | 1 cut(s) | 953 |
| AccB1I | GGYRCC | 1 cut(s) | 312 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2122 |
| AccBSI | CCGCTC | 1 cut(s) | 1878 |
| AccI | GTMKAC | 3 cut(s) | 1149, 1858, 2698 |
| AccII | CGCG | 1 cut(s) | 739 |
| AccIII | TCCGGA | 1 cut(s) | 2080 |
| AciI | CCGC | 8 cut(s) | 80, 483, 739, 984, 1681, 1878, 2471, 2615 |
| AclWI | GGATC | 2 cut(s) | 974, 2886 |
| AcoI | YGGCCR | 2 cut(s) | 1487, 2458 |
| AcsI | RAATTY | 3 cut(s) | 398, 669, 3098 |
| AcuI | CTGAAG | 6 cut(s) | 1026, 1578, 1691, 2042, 2259, 2933 |
| AcyI | GRCGYC | 1 cut(s) | 213 |
| AfaI | GTAC | 7 cut(s) | 72, 461, 636, 895, 1410, 2249, 3131 |
| AfeI | AGCGCT | 1 cut(s) | 1060 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 1496, 1680, 1972, 2122, 2407, 2826, 3143 |
| AflII | CTTAAG | 4 cut(s) | 1102, 1196, 1346, 1655 |
| AflIII | ACRYGT | 3 cut(s) | 857, 2256, 3021 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3255 |
| AjiI | CACGTC | 1 cut(s) | 2257 |
| AjnI | CCWGG | 3 cut(s) | 25, 156, 660 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2075, 2107 |
| Alw26I | GTCTC | 5 cut(s) | 305, 756, 1245, 1752, 2037 |
| AlwI | GGATC | 2 cut(s) | 974, 2886 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2317 |
| Aor13HI | TCCGGA | 1 cut(s) | 2080 |
| Aor51HI | AGCGCT | 1 cut(s) | 1060 |
| AoxI | GGCC | 5 cut(s) | 465, 480, 1487, 2458, 2816 |
| ApeKI | GCWGC | 5 cut(s) | 163, 284, 1460, 1828, 2730 |
| ApoI | RAATTY | 3 cut(s) | 398, 669, 3098 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 669, 2531, 3057 |
| AspA2I | CCTAGG | 1 cut(s) | 139 |
| AspLEI | GCGC | 2 cut(s) | 739, 1061 |
| AspS9I | GGNCC | 2 cut(s) | 480, 2817 |
| AsuC2I | CCSGG | 4 cut(s) | 832, 1625, 1908, 3000 |
| AsuHPI | GGTGA | 6 cut(s) | 86, 977, 1657, 1896, 2141, 3014 |
| AsuNHI | GCTAGC | 1 cut(s) | 2006 |
| AvrII | CCTAGG | 1 cut(s) | 139 |
| AxyI | CCTNAGG | 1 cut(s) | 429 |
| BaeGI | GKGCMC | 1 cut(s) | 317 |
| BalI | TGGCCA | 2 cut(s) | 1489, 2460 |
| BanI | GGYRCC | 1 cut(s) | 312 |
| BbsI | GAAGAC | 3 cut(s) | 572, 1715, 1944 |
| BbvCI | CCTCAGC | 1 cut(s) | 2522 |
| BbvI | GCAGC | 5 cut(s) | 175, 296, 1472, 1815, 2742 |
| BccI | CCATC | 5 cut(s) | 303, 952, 1708, 2411, 2882 |
| BceAI | ACGGC | 1 cut(s) | 89 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 230, 264, 1835, 1869, 2015, 2049 |
| BciT130I | CCWGG | 3 cut(s) | 27, 158, 662 |
| BcnI | CCSGG | 4 cut(s) | 832, 1625, 1908, 3000 |
| BcoDI | GTCTC | 5 cut(s) | 305, 756, 1245, 1752, 2037 |
| BfmI | CTRYAG | 2 cut(s) | 249, 2748 |
| BfoI | RGCGCY | 1 cut(s) | 1062 |
| BfrI | CTTAAG | 4 cut(s) | 1102, 1196, 1346, 1655 |
| BfuAI | ACCTGC | 1 cut(s) | 953 |
| BglII | AGATCT | 3 cut(s) | 1741, 2234, 3055 |
| BisI | GCNGC | 6 cut(s) | 164, 285, 483, 1461, 1829, 2731 |
| BlnI | CCTAGG | 1 cut(s) | 139 |
| BlpI | GCTNAGC | 1 cut(s) | 2039 |
| BlsI | GCNGC | 6 cut(s) | 165, 286, 484, 1462, 1830, 2732 |
| Bme1390I | CCNGG | 7 cut(s) | 27, 158, 662, 832, 1625, 1908, 3000 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3255 |
| BmgBI | CACGTC | 1 cut(s) | 2257 |
| BmgT120I | GGNCC | 2 cut(s) | 480, 2817 |
| BmiI | GGNNCC | 2 cut(s) | 314, 423 |
| BmrFI | CCNGG | 7 cut(s) | 27, 158, 662, 832, 1625, 1908, 3000 |
| BmrI | ACTGGG | 1 cut(s) | 1236 |
| BmsI | GCATC | 7 cut(s) | 879, 958, 1087, 1342, 2056, 2122, 2543 |
| BmtI | GCTAGC | 1 cut(s) | 2010 |
| BmuI | ACTGGG | 1 cut(s) | 1236 |
| BpiI | GAAGAC | 3 cut(s) | 572, 1715, 1944 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2371, 2403 |
| BpmI | CTGGAG | 4 cut(s) | 140, 2398, 2462, 2819 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2522 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2039 |
| BpuEI | CTTGAG | 5 cut(s) | 1800, 1894, 1963, 2165, 2213 |
| BpuMI | CCSGG | 4 cut(s) | 832, 1625, 1908, 3000 |
| BsaAI | YACGTR | 1 cut(s) | 1412 |
| BsaHI | GRCGYC | 1 cut(s) | 213 |
| BsaJI | CCNNGG | 6 cut(s) | 26, 139, 304, 830, 2916, 3108 |
| BsaWI | WCCGGW | 1 cut(s) | 2080 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 113, 143, 1974, 2004, 2078, 2108 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 1496, 1680, 1972, 2122, 2407, 2826, 3143 |
| Bse1I | ACTGG | 5 cut(s) | 65, 1034, 1231, 1338, 2381 |
| Bse21I | CCTNAGG | 1 cut(s) | 429 |
| Bse3DI | GCAATG | 1 cut(s) | 1322 |
| BseAI | TCCGGA | 1 cut(s) | 2080 |
| BseBI | CCWGG | 3 cut(s) | 27, 158, 662 |
| BseDI | CCNNGG | 6 cut(s) | 26, 139, 304, 830, 2916, 3108 |
| BseGI | GGATG | 3 cut(s) | 314, 1357, 2764 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 1496, 1680, 1972, 2122, 2407, 2826, 3143 |
| BseMI | GCAATG | 1 cut(s) | 1322 |
| BseMII | CTCAG | 4 cut(s) | 443, 503, 876, 2513 |
| BseNI | ACTGG | 5 cut(s) | 65, 1034, 1231, 1338, 2381 |
| BseRI | GAGGAG | 4 cut(s) | 623, 1205, 1988, 2710 |
| BseSI | GKGCMC | 1 cut(s) | 317 |
| BseXI | GCAGC | 5 cut(s) | 175, 296, 1472, 1815, 2742 |
| BseYI | CCCAGC | 1 cut(s) | 1753 |
| BsgI | GTGCAG | 4 cut(s) | 182, 386, 3029, 3102 |
| Bsh1236I | CGCG | 1 cut(s) | 739 |
| BshFI | GGCC | 5 cut(s) | 467, 482, 1489, 2460, 2818 |
| BshNI | GGYRCC | 1 cut(s) | 312 |
| BsiSI | CCGG | 5 cut(s) | 832, 1625, 1908, 2081, 3000 |
| BsiWI | CGTACG | 1 cut(s) | 893 |
| BslFI | GGGAC | 1 cut(s) | 837 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 1496, 1680, 1972, 2122, 2407, 2826, 3143 |
| BsmAI | GTCTC | 5 cut(s) | 305, 756, 1245, 1752, 2037 |
| BsmFI | GGGAC | 1 cut(s) | 837 |
| BsmI | GAATGC | 3 cut(s) | 1327, 1401, 3149 |
| BsnI | GGCC | 5 cut(s) | 467, 482, 1489, 2460, 2818 |
| Bsp1286I | GDGCHC | 1 cut(s) | 317 |
| Bsp13I | TCCGGA | 1 cut(s) | 2080 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2039 |
| Bsp19I | CCATGG | 2 cut(s) | 304, 2916 |
| BspACI | CCGC | 8 cut(s) | 80, 483, 739, 984, 1681, 1878, 2471, 2615 |
| BspANI | GGCC | 5 cut(s) | 467, 482, 1489, 2460, 2818 |
| BspCNI | CTCAG | 4 cut(s) | 442, 504, 877, 2514 |
| BspEI | TCCGGA | 1 cut(s) | 2080 |
| BspFNI | CGCG | 1 cut(s) | 739 |
| BspHI | TCATGA | 1 cut(s) | 2832 |
| BspLI | GGNNCC | 2 cut(s) | 314, 423 |
| BspMAI | CTGCAG | 2 cut(s) | 253, 2752 |
| BspMI | ACCTGC | 1 cut(s) | 953 |
| BspOI | GCTAGC | 1 cut(s) | 2010 |
| BspPI | GGATC | 2 cut(s) | 974, 2886 |
| BspQI | GCTCTTC | 1 cut(s) | 727 |
| BspT107I | GGYRCC | 1 cut(s) | 312 |
| BspTI | CTTAAG | 4 cut(s) | 1102, 1196, 1346, 1655 |
| BsrBI | CCGCTC | 1 cut(s) | 1878 |
| BsrDI | GCAATG | 1 cut(s) | 1322 |
| BsrI | ACTGG | 5 cut(s) | 65, 1034, 1231, 1338, 2381 |
| BssECI | CCNNGG | 6 cut(s) | 26, 139, 304, 830, 2916, 3108 |
| BssNAI | GTATAC | 1 cut(s) | 1150 |
| BssNI | GRCGYC | 1 cut(s) | 213 |
| BssT1I | CCWWGG | 4 cut(s) | 139, 304, 2916, 3108 |
| Bst1107I | GTATAC | 1 cut(s) | 1150 |
| Bst2UI | CCWGG | 3 cut(s) | 27, 158, 662 |
| Bst6I | CTCTTC | 6 cut(s) | 450, 727, 1635, 1710, 2537, 2970 |
| BstACI | GRCGYC | 1 cut(s) | 213 |
| BstAFI | CTTAAG | 4 cut(s) | 1102, 1196, 1346, 1655 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 968, 1319 |
| BstBAI | YACGTR | 1 cut(s) | 1412 |
| BstC8I | GCNNGC | 8 cut(s) | 78, 82, 597, 1057, 1751, 2008, 2194, 2735 |
| BstDEI | CTNAG | 7 cut(s) | 429, 512, 885, 1789, 1799, 2039, 2522 |
| BstDSI | CCRYGG | 2 cut(s) | 304, 2916 |
| BstF5I | GGATG | 3 cut(s) | 314, 1357, 2764 |
| BstFNI | CGCG | 1 cut(s) | 739 |
| BstH2I | RGCGCY | 1 cut(s) | 1062 |
| BstHHI | GCGC | 2 cut(s) | 739, 1061 |
| BstMAI | GTCTC | 5 cut(s) | 305, 756, 1245, 1752, 2037 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 290, 734, 968, 1319, 2393, 2865 |
| BstNI | CCWGG | 3 cut(s) | 27, 158, 662 |
| BstNSI | RCATGY | 3 cut(s) | 861, 1088, 3025 |
| BstSCI | CCNGG | 7 cut(s) | 25, 156, 660, 830, 1623, 1906, 2998 |
| BstSFI | CTRYAG | 2 cut(s) | 249, 2748 |
| BstSLI | GKGCMC | 1 cut(s) | 317 |
| BstUI | CGCG | 1 cut(s) | 739 |
| BstV1I | GCAGC | 5 cut(s) | 175, 296, 1472, 1815, 2742 |
| BstV2I | GAAGAC | 3 cut(s) | 572, 1715, 1944 |
| BstX2I | RGATCY | 4 cut(s) | 979, 1741, 2234, 3055 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1022 |
| BstYI | RGATCY | 4 cut(s) | 979, 1741, 2234, 3055 |
| BstZ17I | GTATAC | 1 cut(s) | 1150 |
| Bsu36I | CCTNAGG | 1 cut(s) | 429 |
| BsuRI | GGCC | 5 cut(s) | 467, 482, 1489, 2460, 2818 |
| BtgI | CCRYGG | 2 cut(s) | 304, 2916 |
| BtgZI | GCGATG | 1 cut(s) | 2901 |
| BtrI | CACGTC | 1 cut(s) | 2257 |
| BtsCI | GGATG | 3 cut(s) | 314, 1357, 2764 |
| BtsI | GCAGTG | 1 cut(s) | 2187 |
| BtsIMutI | CAGTG | 5 cut(s) | 1331, 2187, 2302, 2644, 2699 |
| BveI | ACCTGC | 1 cut(s) | 953 |
| Cac8I | GCNNGC | 8 cut(s) | 78, 82, 597, 1057, 1751, 2008, 2194, 2735 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2317 |
| CciI | TCATGA | 1 cut(s) | 2832 |
| CfoI | GCGC | 2 cut(s) | 739, 1061 |
| Cfr13I | GGNCC | 2 cut(s) | 480, 2817 |
| CseI | GACGC | 1 cut(s) | 1116 |
| CsiI | ACCWGGT | 1 cut(s) | 156 |
| Csp6I | GTAC | 7 cut(s) | 71, 460, 635, 894, 1409, 2248, 3130 |
| CviQI | GTAC | 7 cut(s) | 71, 460, 635, 894, 1409, 2248, 3130 |
| DdeI | CTNAG | 7 cut(s) | 429, 512, 885, 1789, 1799, 2039, 2522 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3255 |
| EaeI | YGGCCR | 2 cut(s) | 1487, 2458 |
| Eam1104I | CTCTTC | 6 cut(s) | 450, 727, 1635, 1710, 2537, 2970 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3255 |
| EarI | CTCTTC | 6 cut(s) | 450, 727, 1635, 1710, 2537, 2970 |
| Eco130I | CCWWGG | 4 cut(s) | 139, 304, 2916, 3108 |
| Eco147I | AGGCCT | 1 cut(s) | 467 |
| Eco32I | GATATC | 1 cut(s) | 2955 |
| Eco47III | AGCGCT | 1 cut(s) | 1060 |
| Eco57I | CTGAAG | 6 cut(s) | 1026, 1578, 1691, 2042, 2259, 2933 |
| Eco81I | CCTNAGG | 1 cut(s) | 429 |
| EcoRI | GAATTC | 1 cut(s) | 669 |
| EcoRII | CCWGG | 3 cut(s) | 25, 156, 660 |
| EcoRV | GATATC | 1 cut(s) | 2955 |
| EcoT14I | CCWWGG | 4 cut(s) | 139, 304, 2916, 3108 |
| EcoT22I | ATGCAT | 4 cut(s) | 1090, 1324, 1401, 2137 |
| ErhI | CCWWGG | 4 cut(s) | 139, 304, 2916, 3108 |
| FaqI | GGGAC | 1 cut(s) | 837 |
| FauI | CCCGC | 2 cut(s) | 73, 991 |
| FblI | GTMKAC | 3 cut(s) | 1149, 1858, 2698 |
| Fnu4HI | GCNGC | 6 cut(s) | 164, 285, 483, 1461, 1829, 2731 |
| FokI | GGATG | 3 cut(s) | 321, 1364, 2771 |
| Fsp4HI | GCNGC | 6 cut(s) | 164, 285, 483, 1461, 1829, 2731 |
| GlaI | GCGC | 2 cut(s) | 738, 1060 |
| GluI | GCNGC | 6 cut(s) | 164, 285, 483, 1461, 1829, 2731 |
| GsaI | CCCAGC | 1 cut(s) | 1757 |
| GsuI | CTGGAG | 4 cut(s) | 140, 2398, 2462, 2819 |
| HaeII | RGCGCY | 1 cut(s) | 1062 |
| HaeIII | GGCC | 5 cut(s) | 467, 482, 1489, 2460, 2818 |
| HapII | CCGG | 5 cut(s) | 832, 1625, 1908, 2081, 3000 |
| HgaI | GACGC | 1 cut(s) | 1116 |
| HhaI | GCGC | 2 cut(s) | 739, 1061 |
| Hin1I | GRCGYC | 1 cut(s) | 213 |
| Hin6I | GCGC | 2 cut(s) | 737, 1059 |
| HinP1I | GCGC | 2 cut(s) | 737, 1059 |
| HincII | GTYRAC | 4 cut(s) | 54, 855, 2374, 2653 |
| HindII | GTYRAC | 4 cut(s) | 54, 855, 2374, 2653 |
| HindIII | AAGCTT | 4 cut(s) | 692, 1343, 2857, 2866 |
| HpaI | GTTAAC | 1 cut(s) | 54 |
| HpaII | CCGG | 5 cut(s) | 832, 1625, 1908, 2081, 3000 |
| HphI | GGTGA | 6 cut(s) | 86, 977, 1657, 1896, 2141, 3014 |
| Hpy166II | GTNNAC | 9 cut(s) | 54, 238, 855, 1150, 1859, 2155, 2374, 2653, 2699 |
| Hpy8I | GTNNAC | 9 cut(s) | 54, 238, 855, 1150, 1859, 2155, 2374, 2653, 2699 |
| Hpy99I | CGWCG | 3 cut(s) | 218, 1693, 2258 |
| HpyAV | CCTTC | 7 cut(s) | 184, 283, 670, 1973, 2808, 3194, 3249 |
| HpyCH4IV | ACGT | 4 cut(s) | 213, 1411, 2256, 2331 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 290, 734, 968, 1319, 2393, 2865 |
| HpyF3I | CTNAG | 7 cut(s) | 429, 512, 885, 1789, 1799, 2039, 2522 |
| HpySE526I | ACGT | 4 cut(s) | 213, 1411, 2256, 2331 |
| Hsp92I | GRCGYC | 1 cut(s) | 213 |
| HspAI | GCGC | 2 cut(s) | 737, 1059 |
| Kpn2I | TCCGGA | 1 cut(s) | 2080 |
| KspAI | GTTAAC | 1 cut(s) | 54 |
| LguI | GCTCTTC | 1 cut(s) | 727 |
| LmnI | GCTCC | 5 cut(s) | 427, 441, 942, 1192, 2017 |
| Lsp1109I | GCAGC | 5 cut(s) | 175, 296, 1472, 1815, 2742 |
| LweI | GCATC | 7 cut(s) | 879, 958, 1087, 1342, 2056, 2122, 2543 |
| MabI | ACCWGGT | 1 cut(s) | 156 |
| MaeII | ACGT | 4 cut(s) | 213, 1411, 2256, 2331 |
| MaeIII | GTNAC | 6 cut(s) | 1045, 1169, 2513, 2673, 2743, 3089 |
| MbiI | CCGCTC | 1 cut(s) | 1878 |
| MfeI | CAATTG | 1 cut(s) | 1178 |
| MflI | RGATCY | 4 cut(s) | 979, 1741, 2234, 3055 |
| MhlI | GDGCHC | 1 cut(s) | 317 |
| MlsI | TGGCCA | 2 cut(s) | 1489, 2460 |
| MluNI | TGGCCA | 2 cut(s) | 1489, 2460 |
| MlyI | GAGTC | 5 cut(s) | 133, 1604, 1861, 1992, 2420 |
| Mox20I | TGGCCA | 2 cut(s) | 1489, 2460 |
| Mph1103I | ATGCAT | 4 cut(s) | 1090, 1324, 1401, 2137 |
| MroI | TCCGGA | 1 cut(s) | 2080 |
| MroXI | GAANNNNTTC | 3 cut(s) | 669, 2531, 3057 |
| MscI | TGGCCA | 2 cut(s) | 1489, 2460 |
| MslI | CAYNNNNRTG | 3 cut(s) | 2140, 2501, 2692 |
| Msp20I | TGGCCA | 2 cut(s) | 1489, 2460 |
| MspA1I | CMGCKG | 2 cut(s) | 1828, 2471 |
| MspCI | CTTAAG | 4 cut(s) | 1102, 1196, 1346, 1655 |
| MspI | CCGG | 5 cut(s) | 832, 1625, 1908, 2081, 3000 |
| MspR9I | CCNGG | 7 cut(s) | 27, 158, 662, 832, 1625, 1908, 3000 |
| MunI | CAATTG | 1 cut(s) | 1178 |
| Mva1269I | GAATGC | 3 cut(s) | 1327, 1401, 3149 |
| MvaI | CCWGG | 3 cut(s) | 27, 158, 662 |
| MvnI | CGCG | 1 cut(s) | 739 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 290, 734, 968, 1319, 2393, 2865 |
| NciI | CCSGG | 4 cut(s) | 832, 1625, 1908, 3000 |
| NcoI | CCATGG | 2 cut(s) | 304, 2916 |
| NheI | GCTAGC | 1 cut(s) | 2006 |
| NlaIV | GGNNCC | 2 cut(s) | 314, 423 |
| NmeAIII | GCCGAG | 3 cut(s) | 712, 1133, 2014 |
| NmuCI | GTSAC | 2 cut(s) | 1045, 2513 |
| NsiI | ATGCAT | 4 cut(s) | 1090, 1324, 1401, 2137 |
| NspI | RCATGY | 3 cut(s) | 861, 1088, 3025 |
| PagI | TCATGA | 1 cut(s) | 2832 |
| PaqCI | CACCTGC | 1 cut(s) | 953 |
| PceI | AGGCCT | 1 cut(s) | 467 |
| PciI | ACATGT | 2 cut(s) | 857, 3021 |
| PciSI | GCTCTTC | 1 cut(s) | 727 |
| PctI | GAATGC | 3 cut(s) | 1327, 1401, 3149 |
| PdmI | GAANNNNTTC | 3 cut(s) | 669, 2531, 3057 |
| Pfl23II | CGTACG | 1 cut(s) | 893 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2122 |
| PfoI | TCCNGGA | 1 cut(s) | 1623 |
| PkrI | GCNGC | 6 cut(s) | 165, 286, 484, 1462, 1830, 2732 |
| PleI | GAGTC | 5 cut(s) | 132, 1604, 1860, 1991, 2419 |
| PpsI | GAGTC | 5 cut(s) | 132, 1604, 1860, 1991, 2419 |
| Ppu21I | YACGTR | 1 cut(s) | 1412 |
| PscI | ACATGT | 2 cut(s) | 857, 3021 |
| Psp6I | CCWGG | 3 cut(s) | 25, 156, 660 |
| PspFI | CCCAGC | 1 cut(s) | 1753 |
| PspGI | CCWGG | 3 cut(s) | 25, 156, 660 |
| PspLI | CGTACG | 1 cut(s) | 893 |
| PspN4I | GGNNCC | 2 cut(s) | 314, 423 |
| PspPI | GGNCC | 2 cut(s) | 480, 2817 |
| PstI | CTGCAG | 2 cut(s) | 253, 2752 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2317 |
| PsuI | RGATCY | 4 cut(s) | 979, 1741, 2234, 3055 |
| PvuII | CAGCTG | 1 cut(s) | 1828 |
| RsaI | GTAC | 7 cut(s) | 72, 461, 636, 895, 1410, 2249, 3131 |
| RsaNI | GTAC | 7 cut(s) | 71, 460, 635, 894, 1409, 2248, 3130 |
| RseI | CAYNNNNRTG | 3 cut(s) | 2140, 2501, 2692 |
| SapI | GCTCTTC | 1 cut(s) | 727 |
| SatI | GCNGC | 6 cut(s) | 164, 285, 483, 1461, 1829, 2731 |
| Sau96I | GGNCC | 2 cut(s) | 480, 2817 |
| SchI | GAGTC | 5 cut(s) | 133, 1604, 1861, 1992, 2420 |
| ScrFI | CCNGG | 7 cut(s) | 27, 158, 662, 832, 1625, 1908, 3000 |
| SduI | GDGCHC | 1 cut(s) | 317 |
| SexAI | ACCWGGT | 1 cut(s) | 156 |
| SfaNI | GCATC | 7 cut(s) | 879, 958, 1087, 1342, 2056, 2122, 2543 |
| SfcI | CTRYAG | 2 cut(s) | 249, 2748 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 2140, 2501, 2692 |
| SmlI | CTYRAG | 9 cut(s) | 1102, 1196, 1346, 1655, 1815, 1873, 1942, 2180, 2228 |
| SmoI | CTYRAG | 9 cut(s) | 1102, 1196, 1346, 1655, 1815, 1873, 1942, 2180, 2228 |
| SseBI | AGGCCT | 1 cut(s) | 467 |
| SsiI | CCGC | 8 cut(s) | 80, 483, 739, 984, 1681, 1878, 2471, 2615 |
| SspI | AATATT | 3 cut(s) | 849, 1265, 2278 |
| StuI | AGGCCT | 1 cut(s) | 467 |
| StyD4I | CCNGG | 7 cut(s) | 25, 156, 660, 830, 1623, 1906, 2998 |
| StyI | CCWWGG | 4 cut(s) | 139, 304, 2916, 3108 |
| TaiI | ACGT | 4 cut(s) | 216, 1414, 2259, 2334 |
| TaqI | TCGA | 6 cut(s) | 48, 216, 868, 1427, 2253, 2577 |
| TaqII | GACCGA | 1 cut(s) | 2359 |
| TatI | WGTACW | 2 cut(s) | 634, 2247 |
| TauI | GCSGC | 1 cut(s) | 485 |
| TscAI | CASTG | 5 cut(s) | 1338, 2194, 2302, 2644, 2699 |
| TseFI | GTSAC | 2 cut(s) | 1045, 2513 |
| TseI | GCWGC | 5 cut(s) | 163, 284, 1460, 1828, 2730 |
| Tsp45I | GTSAC | 2 cut(s) | 1045, 2513 |
| TspGWI | ACGGA | 5 cut(s) | 320, 782, 1677, 2223, 3093 |
| TspRI | CASTG | 5 cut(s) | 1338, 2194, 2302, 2644, 2699 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2122 |
| Vha464I | CTTAAG | 4 cut(s) | 1102, 1196, 1346, 1655 |
| XapI | RAATTY | 3 cut(s) | 398, 669, 3098 |
| XbaI | TCTAGA | 1 cut(s) | 2929 |
| XceI | RCATGY | 3 cut(s) | 861, 1088, 3025 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2200 |
| XmaJI | CCTAGG | 1 cut(s) | 139 |
| XmiI | GTMKAC | 3 cut(s) | 1149, 1858, 2698 |
| XmnI | GAANNNNTTC | 3 cut(s) | 669, 2531, 3057 |
| ZraI | GACGTC | 1 cut(s) | 214 |
| Zsp2I | ATGCAT | 4 cut(s) | 1090, 1324, 1401, 2137 |