Uncharacterized protein K02A2.6-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Retrotrans_gag | PF03732 | 433 - 519 | 1.3e-11 | Retrotransposon gag protein |
| RVT_1 | PF00078 | 1561 - 1720 | 3.3e-31 | Reverse transcriptase (RNA-dependent DNA polymerase) |
| RT_RNaseH_2 | PF17919 | 1784 - 1882 | 3.6e-24 | RNase H-like domain found in reverse transcriptase |
| RT_RNaseH | PF17917 | 1812 - 1913 | 1e-24 | RNase H-like domain found in reverse transcriptase |
| RVT_3 | PF13456 | 1964 - 2083 | 7.5e-20 | Reverse transcriptase-like |
| rve | PF00665 | 2258 - 2355 | 3e-13 | Integrase core domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 4 cut(s) | 3922, 4931, 6325, 7394 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1531 |
| AatII | GACGTC | 5 cut(s) | 1268, 1710, 3328, 4015, 5707 |
| Acc36I | ACCTGC | 6 cut(s) | 1911, 3922, 4931, 5847, 6325, 7394 |
| Acc65I | GGTACC | 3 cut(s) | 1176, 1781, 5809 |
| AccB1I | GGYRCC | 8 cut(s) | 4, 1176, 1781, 2374, 4855, 5419, 5809, 7406 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 44, 679, 4164 |
| AccBSI | CCGCTC | 4 cut(s) | 2312, 3860, 4578, 5668 |
| AccI | GTMKAC | 9 cut(s) | 406, 4190, 4716, 4785, 4902, 5013, 5184, 6456, 7159 |
| AccII | CGCG | 1 cut(s) | 864 |
| AccIII | TCCGGA | 1 cut(s) | 6927 |
| AclI | AACGTT | 2 cut(s) | 2852, 3362 |
| AcoI | YGGCCR | 2 cut(s) | 91, 2955 |
| AcsI | RAATTY | 8 cut(s) | 1718, 2447, 3464, 4701, 5144, 5735, 5747, 6919 |
| AcvI | CACGTG | 1 cut(s) | 5877 |
| AcyI | GRCGYC | 7 cut(s) | 1265, 1278, 1707, 2375, 3325, 4012, 5704 |
| AfeI | AGCGCT | 2 cut(s) | 6042, 7344 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 44, 679, 1121, 3434, 3664, 4164, 5429, 5951, 6522 |
| AflII | CTTAAG | 2 cut(s) | 3887, 6568 |
| AflIII | ACRYGT | 2 cut(s) | 75, 6190 |
| AgeI | ACCGGT | 2 cut(s) | 2318, 5689 |
| AhdI | GACNNNNNGTC | 3 cut(s) | 1298, 4438, 7532 |
| AhlI | ACTAGT | 1 cut(s) | 754 |
| AjiI | CACGTC | 1 cut(s) | 2919 |
| AjnI | CCWGG | 5 cut(s) | 1233, 1980, 2159, 3679, 4492 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3395, 3427 |
| Alw21I | GWGCWC | 6 cut(s) | 232, 2892, 4587, 5559, 6601, 7214 |
| Alw44I | GTGCAC | 1 cut(s) | 7210 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 4304 |
| Ama87I | CYCGRG | 7 cut(s) | 2424, 4077, 4831, 4859, 7163, 7256, 7379 |
| Aor13HI | TCCGGA | 1 cut(s) | 6927 |
| Aor51HI | AGCGCT | 2 cut(s) | 6042, 7344 |
| ApaLI | GTGCAC | 1 cut(s) | 7210 |
| ApoI | RAATTY | 8 cut(s) | 1718, 2447, 3464, 4701, 5144, 5735, 5747, 6919 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 3158, 3190, 3465, 3497, 5732, 5764 |
| AsiGI | ACCGGT | 2 cut(s) | 2318, 5689 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 5082 |
| Asp718I | GGTACC | 3 cut(s) | 1176, 1781, 5809 |
| AspA2I | CCTAGG | 1 cut(s) | 5225 |
| AspLEI | GCGC | 6 cut(s) | 864, 866, 2377, 4406, 6043, 7345 |
| AsuC2I | CCSGG | 1 cut(s) | 3578 |
| AsuII | TTCGAA | 1 cut(s) | 5086 |
| AsuNHI | GCTAGC | 2 cut(s) | 1631, 4525 |
| AvaI | CYCGRG | 7 cut(s) | 2424, 4077, 4831, 4859, 7163, 7256, 7379 |
| AvaII | GGWCC | 8 cut(s) | 2048, 3667, 4020, 4501, 6513, 6611, 6803, 7526 |
| AvrII | CCTAGG | 1 cut(s) | 5225 |
| AxyI | CCTNAGG | 1 cut(s) | 2082 |
| BaeGI | GKGCMC | 2 cut(s) | 2924, 7214 |
| BalI | TGGCCA | 1 cut(s) | 93 |
| BamHI | GGATCC | 5 cut(s) | 508, 1352, 3424, 5662, 7235 |
| BanI | GGYRCC | 8 cut(s) | 4, 1176, 1781, 2374, 4855, 5419, 5809, 7406 |
| BanII | GRGCYC | 5 cut(s) | 232, 1911, 2892, 4587, 6601 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 6440, 6472, 7233, 7265 |
| BauI | CACGAG | 1 cut(s) | 5317 |
| BbrPI | CACGTG | 1 cut(s) | 5877 |
| BbsI | GAAGAC | 9 cut(s) | 365, 844, 2478, 3588, 4281, 4329, 5440, 5841, 7540 |
| Bbv12I | GWGCWC | 6 cut(s) | 232, 2892, 4587, 5559, 6601, 7214 |
| BceAI | ACGGC | 5 cut(s) | 2942, 4080, 5217, 7083, 7215 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 4696, 4730 |
| BciT130I | CCWGG | 5 cut(s) | 1235, 1982, 2161, 3681, 4494 |
| BciVI | GTATCC | 5 cut(s) | 2639, 3703, 4829, 6519, 6568 |
| BclI | TGATCA | 1 cut(s) | 1989 |
| BcnI | CCSGG | 1 cut(s) | 3578 |
| BcuI | ACTAGT | 1 cut(s) | 754 |
| BfmI | CTRYAG | 6 cut(s) | 1593, 2052, 3795, 4720, 5862, 7188 |
| BfoI | RGCGCY | 4 cut(s) | 2378, 4407, 6044, 7346 |
| BfrI | CTTAAG | 2 cut(s) | 3887, 6568 |
| BfuAI | ACCTGC | 6 cut(s) | 1911, 3922, 4931, 5847, 6325, 7394 |
| BfuI | GTATCC | 5 cut(s) | 2639, 3703, 4829, 6519, 6568 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3568 |
| BglII | AGATCT | 3 cut(s) | 1419, 5468, 6209 |
| BlnI | CCTAGG | 1 cut(s) | 5225 |
| BlpI | GCTNAGC | 1 cut(s) | 5587 |
| BmcAI | AGTACT | 3 cut(s) | 753, 3801, 6413 |
| Bme1390I | CCNGG | 6 cut(s) | 1235, 1982, 2161, 3578, 3681, 4494 |
| Bme18I | GGWCC | 8 cut(s) | 2048, 3667, 4020, 4501, 6513, 6611, 6803, 7526 |
| BmeRI | GACNNNNNGTC | 3 cut(s) | 1298, 4438, 7532 |
| BmeT110I | CYCGRG | 7 cut(s) | 2424, 4077, 4831, 4859, 7163, 7256, 7379 |
| BmgBI | CACGTC | 1 cut(s) | 2919 |
| BmrFI | CCNGG | 6 cut(s) | 1235, 1982, 2161, 3578, 3681, 4494 |
| BmrI | ACTGGG | 2 cut(s) | 3473, 5402 |
| BmtI | GCTAGC | 2 cut(s) | 1635, 4529 |
| BmuI | ACTGGG | 2 cut(s) | 3473, 5402 |
| BoxI | GACNNNNGTC | 1 cut(s) | 170 |
| BpiI | GAAGAC | 9 cut(s) | 365, 844, 2478, 3588, 4281, 4329, 5440, 5841, 7540 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 796, 828, 2000, 2032, 2886, 2918 |
| Bpu10I | CCTNAGC | 3 cut(s) | 651, 2388, 2769 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 5587 |
| Bpu14I | TTCGAA | 1 cut(s) | 5086 |
| BpuMI | CCSGG | 1 cut(s) | 3578 |
| Bsa29I | ATCGAT | 2 cut(s) | 4623, 6057 |
| BsaAI | YACGTR | 3 cut(s) | 1329, 1365, 5877 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1424, 3423, 6053 |
| BsaHI | GRCGYC | 7 cut(s) | 1265, 1278, 1707, 2375, 3325, 4012, 5704 |
| BsaI | GGTCTC | 3 cut(s) | 289, 1627, 7132 |
| BsaWI | WCCGGW | 4 cut(s) | 2318, 5689, 5806, 6927 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 44, 679, 1121, 3434, 3664, 4164, 5429, 5951, 6522 |
| Bse118I | RCCGGY | 3 cut(s) | 2318, 2537, 5689 |
| Bse1I | ACTGG | 7 cut(s) | 70, 3208, 3479, 3572, 3763, 5408, 6249 |
| Bse21I | CCTNAGG | 1 cut(s) | 2082 |
| Bse3DI | GCAATG | 5 cut(s) | 2870, 4968, 5487, 5720, 6740 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1424, 3423, 6053 |
| BseAI | TCCGGA | 1 cut(s) | 6927 |
| BseBI | CCWGG | 5 cut(s) | 1235, 1982, 2161, 3681, 4494 |
| BseCI | ATCGAT | 2 cut(s) | 4623, 6057 |
| BseJI | GATNNNNATC | 3 cut(s) | 1424, 3423, 6053 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 44, 679, 1121, 3434, 3664, 4164, 5429, 5951, 6522 |
| BseMI | GCAATG | 5 cut(s) | 2870, 4968, 5487, 5720, 6740 |
| BseNI | ACTGG | 7 cut(s) | 70, 3208, 3479, 3572, 3763, 5408, 6249 |
| BsePI | GCGCGC | 1 cut(s) | 862 |
| BseRI | GAGGAG | 3 cut(s) | 1553, 4554, 5928 |
| BseSI | GKGCMC | 2 cut(s) | 2924, 7214 |
| BseYI | CCCAGC | 6 cut(s) | 604, 672, 1882, 2845, 6848, 7290 |
| BsgI | GTGCAG | 1 cut(s) | 2184 |
| Bsh1236I | CGCG | 1 cut(s) | 864 |
| BshNI | GGYRCC | 8 cut(s) | 4, 1176, 1781, 2374, 4855, 5419, 5809, 7406 |
| BshTI | ACCGGT | 2 cut(s) | 2318, 5689 |
| BshVI | ATCGAT | 2 cut(s) | 4623, 6057 |
| BsiHKAI | GWGCWC | 6 cut(s) | 232, 2892, 4587, 5559, 6601, 7214 |
| BsiHKCI | CYCGRG | 7 cut(s) | 2424, 4077, 4831, 4859, 7163, 7256, 7379 |
| BsiSI | CCGG | 6 cut(s) | 2319, 2538, 3577, 5690, 5807, 6928 |
| BsiWI | CGTACG | 1 cut(s) | 7196 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 44, 679, 1121, 3434, 3664, 4164, 5429, 5951, 6522 |
| BsmBI | CGTCTC | 2 cut(s) | 1256, 1272 |
| BsmI | GAATGC | 4 cut(s) | 199, 2999, 5374, 7318 |
| Bso31I | GGTCTC | 3 cut(s) | 289, 1627, 7132 |
| BsoBI | CYCGRG | 7 cut(s) | 2424, 4077, 4831, 4859, 7163, 7256, 7379 |
| Bsp119I | TTCGAA | 1 cut(s) | 5086 |
| Bsp1286I | GDGCHC | 8 cut(s) | 232, 1911, 2892, 2924, 4587, 5559, 6601, 7214 |
| Bsp13I | TCCGGA | 1 cut(s) | 6927 |
| Bsp1407I | TGTACA | 1 cut(s) | 6504 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 5587 |
| Bsp19I | CCATGG | 2 cut(s) | 1743, 3225 |
| BspDI | ATCGAT | 2 cut(s) | 4623, 6057 |
| BspEI | TCCGGA | 1 cut(s) | 6927 |
| BspFNI | CGCG | 1 cut(s) | 864 |
| BspHI | TCATGA | 1 cut(s) | 1225 |
| BspMAI | CTGCAG | 2 cut(s) | 1597, 2056 |
| BspMI | ACCTGC | 6 cut(s) | 1911, 3922, 4931, 5847, 6325, 7394 |
| BspOI | GCTAGC | 2 cut(s) | 1635, 4529 |
| BspQI | GCTCTTC | 3 cut(s) | 4248, 4374, 6480 |
| BspT104I | TTCGAA | 1 cut(s) | 5086 |
| BspT107I | GGYRCC | 8 cut(s) | 4, 1176, 1781, 2374, 4855, 5419, 5809, 7406 |
| BspTI | CTTAAG | 2 cut(s) | 3887, 6568 |
| BspTNI | GGTCTC | 3 cut(s) | 289, 1627, 7132 |
| BsrBI | CCGCTC | 4 cut(s) | 2312, 3860, 4578, 5668 |
| BsrDI | GCAATG | 5 cut(s) | 2870, 4968, 5487, 5720, 6740 |
| BsrFI | RCCGGY | 3 cut(s) | 2318, 2537, 5689 |
| BsrGI | TGTACA | 1 cut(s) | 6504 |
| BsrI | ACTGG | 7 cut(s) | 70, 3208, 3479, 3572, 3763, 5408, 6249 |
| BssAI | RCCGGY | 3 cut(s) | 2318, 2537, 5689 |
| BssHII | GCGCGC | 1 cut(s) | 862 |
| BssNAI | GTATAC | 3 cut(s) | 407, 4903, 6457 |
| BssNI | GRCGYC | 7 cut(s) | 1265, 1278, 1707, 2375, 3325, 4012, 5704 |
| BssSI | CACGAG | 1 cut(s) | 5317 |
| Bst1107I | GTATAC | 3 cut(s) | 407, 4903, 6457 |
| Bst2BI | CACGAG | 1 cut(s) | 5317 |
| Bst2UI | CCWGG | 5 cut(s) | 1235, 1982, 2161, 3681, 4494 |
| BstACI | GRCGYC | 7 cut(s) | 1265, 1278, 1707, 2375, 3325, 4012, 5704 |
| BstAFI | CTTAAG | 2 cut(s) | 3887, 6568 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 284, 2985, 2994, 4304 |
| BstAUI | TGTACA | 1 cut(s) | 6504 |
| BstBAI | YACGTR | 3 cut(s) | 1329, 1365, 5877 |
| BstBI | TTCGAA | 1 cut(s) | 5086 |
| BstDSI | CCRYGG | 5 cut(s) | 1743, 3225, 3329, 4034, 7065 |
| BstEII | GGTNACC | 3 cut(s) | 68, 427, 2521 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 3432, 3662 |
| BstFNI | CGCG | 1 cut(s) | 864 |
| BstH2I | RGCGCY | 4 cut(s) | 2378, 4407, 6044, 7346 |
| BstHHI | GCGC | 6 cut(s) | 864, 866, 2377, 4406, 6043, 7345 |
| BstNI | CCWGG | 5 cut(s) | 1235, 1982, 2161, 3681, 4494 |
| BstNSI | RCATGY | 4 cut(s) | 79, 1378, 6194, 6708 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 170 |
| BstPI | GGTNACC | 3 cut(s) | 68, 427, 2521 |
| BstSCI | CCNGG | 6 cut(s) | 1233, 1980, 2159, 3576, 3679, 4492 |
| BstSFI | CTRYAG | 6 cut(s) | 1593, 2052, 3795, 4720, 5862, 7188 |
| BstSLI | GKGCMC | 2 cut(s) | 2924, 7214 |
| BstUI | CGCG | 1 cut(s) | 864 |
| BstV2I | GAAGAC | 9 cut(s) | 365, 844, 2478, 3588, 4281, 4329, 5440, 5841, 7540 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 3344, 6716 |
| BstZ17I | GTATAC | 3 cut(s) | 407, 4903, 6457 |
| Bsu15I | ATCGAT | 2 cut(s) | 4623, 6057 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2082 |
| BsuI | GTATCC | 5 cut(s) | 2639, 3703, 4829, 6519, 6568 |
| BsuTUI | ATCGAT | 2 cut(s) | 4623, 6057 |
| BtgI | CCRYGG | 5 cut(s) | 1743, 3225, 3329, 4034, 7065 |
| BtgZI | GCGATG | 3 cut(s) | 212, 1913, 2518 |
| BtrI | CACGTC | 1 cut(s) | 2919 |
| BtsI | GCAGTG | 2 cut(s) | 1590, 7251 |
| BtsIMutI | CAGTG | 9 cut(s) | 435, 471, 564, 1590, 4050, 4239, 4920, 5415, 7251 |
| BveI | ACCTGC | 6 cut(s) | 1911, 3922, 4931, 5847, 6325, 7394 |
| CaiI | CAGNNNCTG | 1 cut(s) | 4304 |
| CciI | TCATGA | 1 cut(s) | 1225 |
| CfoI | GCGC | 6 cut(s) | 864, 866, 2377, 4406, 6043, 7345 |
| Cfr10I | RCCGGY | 3 cut(s) | 2318, 2537, 5689 |
| ClaI | ATCGAT | 2 cut(s) | 4623, 6057 |
| CseI | GACGC | 7 cut(s) | 175, 1286, 2848, 4578, 4702, 4796, 6683 |
| CspAI | ACCGGT | 2 cut(s) | 2318, 5689 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 7276, 7311 |
| DinI | GGCGCC | 1 cut(s) | 2376 |
| DraI | TTTAAA | 5 cut(s) | 1107, 1500, 3433, 5347, 7116 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1531 |
| DriI | GACNNNNNGTC | 3 cut(s) | 1298, 4438, 7532 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1531 |
| EaeI | YGGCCR | 2 cut(s) | 91, 2955 |
| Eam1105I | GACNNNNNGTC | 3 cut(s) | 1298, 4438, 7532 |
| EciI | GGCGGA | 2 cut(s) | 1101, 6242 |
| Ecl136II | GAGCTC | 4 cut(s) | 230, 2890, 4585, 6599 |
| Eco147I | AGGCCT | 1 cut(s) | 7474 |
| Eco24I | GRGCYC | 5 cut(s) | 232, 1911, 2892, 4587, 6601 |
| Eco31I | GGTCTC | 3 cut(s) | 289, 1627, 7132 |
| Eco32I | GATATC | 1 cut(s) | 2929 |
| Eco47I | GGWCC | 8 cut(s) | 2048, 3667, 4020, 4501, 6513, 6611, 6803, 7526 |
| Eco47III | AGCGCT | 2 cut(s) | 6042, 7344 |
| Eco53kI | GAGCTC | 4 cut(s) | 230, 2890, 4585, 6599 |
| Eco72I | CACGTG | 1 cut(s) | 5877 |
| Eco81I | CCTNAGG | 1 cut(s) | 2082 |
| Eco88I | CYCGRG | 7 cut(s) | 2424, 4077, 4831, 4859, 7163, 7256, 7379 |
| Eco91I | GGTNACC | 3 cut(s) | 68, 427, 2521 |
| EcoICRI | GAGCTC | 4 cut(s) | 230, 2890, 4585, 6599 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 3432, 3662 |
| EcoO109I | RGGNCCY | 7 cut(s) | 2048, 2340, 2392, 4020, 6513, 6803, 7526 |
| EcoO65I | GGTNACC | 3 cut(s) | 68, 427, 2521 |
| EcoRI | GAATTC | 1 cut(s) | 2447 |
| EcoRII | CCWGG | 5 cut(s) | 1233, 1980, 2159, 3679, 4492 |
| EcoRV | GATATC | 1 cut(s) | 2929 |
| EcoT22I | ATGCAT | 5 cut(s) | 100, 1618, 2999, 6235, 6404 |
| EcoT38I | GRGCYC | 5 cut(s) | 232, 1911, 2892, 4587, 6601 |
| EgeI | GGCGCC | 1 cut(s) | 2376 |
| EheI | GGCGCC | 1 cut(s) | 2376 |
| Esp3I | CGTCTC | 2 cut(s) | 1256, 1272 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2329, 2361 |
| FauI | CCCGC | 2 cut(s) | 5229, 6416 |
| FauNDI | CATATG | 3 cut(s) | 3343, 6352, 7564 |
| FbaI | TGATCA | 1 cut(s) | 1989 |
| FblI | GTMKAC | 9 cut(s) | 406, 4190, 4716, 4785, 4902, 5013, 5184, 6456, 7159 |
| FriOI | GRGCYC | 5 cut(s) | 232, 1911, 2892, 4587, 6601 |
| GlaI | GCGC | 6 cut(s) | 863, 865, 2376, 4405, 6042, 7344 |
| GsaI | CCCAGC | 6 cut(s) | 608, 676, 1886, 2849, 6852, 7294 |
| HaeII | RGCGCY | 4 cut(s) | 2378, 4407, 6044, 7346 |
| HapII | CCGG | 6 cut(s) | 2319, 2538, 3577, 5690, 5807, 6928 |
| HgaI | GACGC | 7 cut(s) | 175, 1286, 2848, 4578, 4702, 4796, 6683 |
| HhaI | GCGC | 6 cut(s) | 864, 866, 2377, 4406, 6043, 7345 |
| Hin1I | GRCGYC | 7 cut(s) | 1265, 1278, 1707, 2375, 3325, 4012, 5704 |
| Hin6I | GCGC | 6 cut(s) | 862, 864, 2375, 4404, 6041, 7343 |
| HinP1I | GCGC | 6 cut(s) | 862, 864, 2375, 4404, 6041, 7343 |
| HindIII | AAGCTT | 8 cut(s) | 372, 459, 2910, 3884, 3972, 5358, 6069, 7086 |
| HpaII | CCGG | 6 cut(s) | 2319, 2538, 3577, 5690, 5807, 6928 |
| Hpy99I | CGWCG | 5 cut(s) | 4014, 4572, 4718, 4790, 5018 |
| Hsp92I | GRCGYC | 7 cut(s) | 1265, 1278, 1707, 2375, 3325, 4012, 5704 |
| HspAI | GCGC | 6 cut(s) | 862, 864, 2375, 4404, 6041, 7343 |
| KasI | GGCGCC | 1 cut(s) | 2374 |
| KflI | GGGWCCC | 2 cut(s) | 4020, 6803 |
| Kpn2I | TCCGGA | 1 cut(s) | 6927 |
| KpnI | GGTACC | 3 cut(s) | 1180, 1785, 5813 |
| KroI | GCCGGC | 1 cut(s) | 2537 |
| KroNI | GCCGGC | 1 cut(s) | 2539 |
| Ksp22I | TGATCA | 1 cut(s) | 1989 |
| LguI | GCTCTTC | 3 cut(s) | 4248, 4374, 6480 |
| MbiI | CCGCTC | 4 cut(s) | 2312, 3860, 4578, 5668 |
| MfeI | CAATTG | 4 cut(s) | 261, 3170, 4062, 5096 |
| MhlI | GDGCHC | 8 cut(s) | 232, 1911, 2892, 2924, 4587, 5559, 6601, 7214 |
| MlsI | TGGCCA | 1 cut(s) | 93 |
| MluNI | TGGCCA | 1 cut(s) | 93 |
| Mly113I | GGCGCC | 1 cut(s) | 2375 |
| MlyI | GAGTC | 8 cut(s) | 478, 631, 1748, 2009, 2243, 2804, 3169, 7329 |
| MmeI | TCCRAC | 9 cut(s) | 497, 1494, 2090, 2339, 3052, 7036, 7060, 7393, 7426 |
| Mox20I | TGGCCA | 1 cut(s) | 93 |
| Mph1103I | ATGCAT | 5 cut(s) | 100, 1618, 2999, 6235, 6404 |
| MreI | CGCCGGCG | 1 cut(s) | 2537 |
| MroI | TCCGGA | 1 cut(s) | 6927 |
| MroNI | GCCGGC | 1 cut(s) | 2537 |
| MroXI | GAANNNNTTC | 1 cut(s) | 5082 |
| MscI | TGGCCA | 1 cut(s) | 93 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1327, 3342, 4397, 4916, 5875 |
| Msp20I | TGGCCA | 1 cut(s) | 93 |
| MspA1I | CMGCKG | 2 cut(s) | 1538, 1886 |
| MspCI | CTTAAG | 2 cut(s) | 3887, 6568 |
| MspI | CCGG | 6 cut(s) | 2319, 2538, 3577, 5690, 5807, 6928 |
| MspR9I | CCNGG | 6 cut(s) | 1235, 1982, 2161, 3578, 3681, 4494 |
| MssI | GTTTAAAC | 1 cut(s) | 1500 |
| MunI | CAATTG | 4 cut(s) | 261, 3170, 4062, 5096 |
| Mva1269I | GAATGC | 4 cut(s) | 199, 2999, 5374, 7318 |
| MvaI | CCWGG | 5 cut(s) | 1235, 1982, 2161, 3681, 4494 |
| MvnI | CGCG | 1 cut(s) | 864 |
| NaeI | GCCGGC | 1 cut(s) | 2539 |
| NarI | GGCGCC | 1 cut(s) | 2375 |
| NciI | CCSGG | 1 cut(s) | 3578 |
| NcoI | CCATGG | 2 cut(s) | 1743, 3225 |
| NdeI | CATATG | 3 cut(s) | 3343, 6352, 7564 |
| NgoMIV | GCCGGC | 1 cut(s) | 2537 |
| NheI | GCTAGC | 2 cut(s) | 1631, 4525 |
| NmeAIII | GCCGAG | 1 cut(s) | 2134 |
| NsiI | ATGCAT | 5 cut(s) | 100, 1618, 2999, 6235, 6404 |
| NspI | RCATGY | 4 cut(s) | 79, 1378, 6194, 6708 |
| NspV | TTCGAA | 1 cut(s) | 5086 |
| PaeI | GCATGC | 1 cut(s) | 6708 |
| PaeR7I | CTCGAG | 4 cut(s) | 2424, 4077, 7256, 7379 |
| PagI | TCATGA | 1 cut(s) | 1225 |
| PaqCI | CACCTGC | 4 cut(s) | 3922, 4931, 6325, 7394 |
| PauI | GCGCGC | 1 cut(s) | 862 |
| PceI | AGGCCT | 1 cut(s) | 7474 |
| PciI | ACATGT | 2 cut(s) | 75, 6190 |
| PciSI | GCTCTTC | 3 cut(s) | 4248, 4374, 6480 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 6009 |
| PctI | GAATGC | 4 cut(s) | 199, 2999, 5374, 7318 |
| PdiI | GCCGGC | 1 cut(s) | 2539 |
| PdmI | GAANNNNTTC | 1 cut(s) | 5082 |
| Pfl23II | CGTACG | 1 cut(s) | 7196 |
| PflFI | GACNNNGTC | 1 cut(s) | 7454 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 44, 679, 4164 |
| PfoI | TCCNGGA | 1 cut(s) | 1980 |
| PinAI | ACCGGT | 2 cut(s) | 2318, 5689 |
| PleI | GAGTC | 8 cut(s) | 477, 631, 1747, 2009, 2242, 2803, 3168, 7328 |
| PluTI | GGCGCC | 1 cut(s) | 2378 |
| PmaCI | CACGTG | 1 cut(s) | 5877 |
| PmeI | GTTTAAAC | 1 cut(s) | 1500 |
| PmlI | CACGTG | 1 cut(s) | 5877 |
| PpsI | GAGTC | 8 cut(s) | 477, 631, 1747, 2009, 2242, 2803, 3168, 7328 |
| Ppu21I | YACGTR | 3 cut(s) | 1329, 1365, 5877 |
| PpuMI | RGGWCCY | 5 cut(s) | 2048, 4020, 6513, 6803, 7526 |
| PscI | ACATGT | 2 cut(s) | 75, 6190 |
| PshAI | GACNNNNGTC | 1 cut(s) | 170 |
| Psp124BI | GAGCTC | 4 cut(s) | 232, 2892, 4587, 6601 |
| Psp1406I | AACGTT | 2 cut(s) | 2852, 3362 |
| Psp5II | RGGWCCY | 5 cut(s) | 2048, 4020, 6513, 6803, 7526 |
| Psp6I | CCWGG | 5 cut(s) | 1233, 1980, 2159, 3679, 4492 |
| PspCI | CACGTG | 1 cut(s) | 5877 |
| PspEI | GGTNACC | 3 cut(s) | 68, 427, 2521 |
| PspFI | CCCAGC | 6 cut(s) | 604, 672, 1882, 2845, 6848, 7290 |
| PspGI | CCWGG | 5 cut(s) | 1233, 1980, 2159, 3679, 4492 |
| PspLI | CGTACG | 1 cut(s) | 7196 |
| PspPPI | RGGWCCY | 5 cut(s) | 2048, 4020, 6513, 6803, 7526 |
| PspXI | VCTCGAGB | 2 cut(s) | 2424, 4077 |
| PstI | CTGCAG | 2 cut(s) | 1597, 2056 |
| PstNI | CAGNNNCTG | 1 cut(s) | 4304 |
| PsyI | GACNNNGTC | 1 cut(s) | 7454 |
| PteI | GCGCGC | 1 cut(s) | 862 |
| PvuII | CAGCTG | 1 cut(s) | 1886 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1327, 3342, 4397, 4916, 5875 |
| SacI | GAGCTC | 4 cut(s) | 232, 2892, 4587, 6601 |
| SalI | GTCGAC | 4 cut(s) | 4715, 4784, 5012, 5183 |
| SapI | GCTCTTC | 3 cut(s) | 4248, 4374, 6480 |
| ScaI | AGTACT | 3 cut(s) | 753, 3801, 6413 |
| SchI | GAGTC | 8 cut(s) | 478, 631, 1748, 2009, 2243, 2804, 3169, 7329 |
| ScrFI | CCNGG | 6 cut(s) | 1235, 1982, 2161, 3578, 3681, 4494 |
| SduI | GDGCHC | 8 cut(s) | 232, 1911, 2892, 2924, 4587, 5559, 6601, 7214 |
| SfcI | CTRYAG | 6 cut(s) | 1593, 2052, 3795, 4720, 5862, 7188 |
| SfoI | GGCGCC | 1 cut(s) | 2376 |
| Sfr274I | CTCGAG | 4 cut(s) | 2424, 4077, 7256, 7379 |
| SfuI | TTCGAA | 1 cut(s) | 5086 |
| SgrAI | CRCCGGYG | 1 cut(s) | 2537 |
| SinI | GGWCC | 8 cut(s) | 2048, 3667, 4020, 4501, 6513, 6611, 6803, 7526 |
| SlaI | CTCGAG | 4 cut(s) | 2424, 4077, 7256, 7379 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1327, 3342, 4397, 4916, 5875 |
| SpeI | ACTAGT | 1 cut(s) | 754 |
| SphI | GCATGC | 1 cut(s) | 6708 |
| SseBI | AGGCCT | 1 cut(s) | 7474 |
| SspDI | GGCGCC | 1 cut(s) | 2374 |
| SspI | AATATT | 1 cut(s) | 7111 |
| SstI | GAGCTC | 4 cut(s) | 232, 2892, 4587, 6601 |
| StuI | AGGCCT | 1 cut(s) | 7474 |
| StyD4I | CCNGG | 6 cut(s) | 1233, 1980, 2159, 3576, 3679, 4492 |
| TaqII | GACCGA | 1 cut(s) | 1541 |
| TatI | WGTACW | 9 cut(s) | 751, 1245, 1963, 2261, 3799, 4455, 6187, 6411, 6504 |
| TauI | GCSGC | 2 cut(s) | 887, 5459 |
| TscAI | CASTG | 9 cut(s) | 442, 471, 571, 1597, 4050, 4239, 4920, 5415, 7251 |
| TspGWI | ACGGA | 5 cut(s) | 3318, 4341, 4710, 6343, 6869 |
| TspRI | CASTG | 9 cut(s) | 442, 471, 571, 1597, 4050, 4239, 4920, 5415, 7251 |
| Tth111I | GACNNNGTC | 1 cut(s) | 7454 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 44, 679, 4164 |
| Vha464I | CTTAAG | 2 cut(s) | 3887, 6568 |
| VneI | GTGCAC | 1 cut(s) | 7210 |
| VpaK11BI | GGWCC | 8 cut(s) | 2048, 3667, 4020, 4501, 6513, 6611, 6803, 7526 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 3432, 3662 |
| XapI | RAATTY | 8 cut(s) | 1718, 2447, 3464, 4701, 5144, 5735, 5747, 6919 |
| XceI | RCATGY | 4 cut(s) | 79, 1378, 6194, 6708 |
| XhoI | CTCGAG | 4 cut(s) | 2424, 4077, 7256, 7379 |
| XmaJI | CCTAGG | 1 cut(s) | 5225 |
| XmiI | GTMKAC | 9 cut(s) | 406, 4190, 4716, 4785, 4902, 5013, 5184, 6456, 7159 |
| XmnI | GAANNNNTTC | 1 cut(s) | 5082 |
| ZraI | GACGTC | 5 cut(s) | 1266, 1708, 3326, 4013, 5705 |
| ZrmI | AGTACT | 3 cut(s) | 753, 3801, 6413 |
| Zsp2I | ATGCAT | 5 cut(s) | 100, 1618, 2999, 6235, 6404 |