Rw3G019580

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000160
Physical Location & Seq
Reverse (-)
22587294 .. 22588898
1605 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G019580.1

Sequence Viewer

Length: 1605 bp
ATGGAAAAGCTGTGCCTAACCCAGTACTTTTCAGCGTGCAAGTTGCGACACTACATGTTATCCTTTACCACGTGCATCATCGCTCAGACCGATTTGGTCAAATACATGTTGTCCCGGCCTATCTTGGGAGGCCGCATTGGCAAATGGGTATTGGCGCTTTCAGAGTTTTCACTCCAATATGTACCCCAGAAGGCTGTCAAAGGGCAGGCTATTGCAGATTTTCTAGCACACCATCCTCCGCTAGAGATACCCGTACTGAAGGAGTTAGAGATTGCCTGCAACACTACGACTCGACTAGATAAAGCGTATATCCCTGAGTACGAGGTCTGGTATCAAGCTACGATCTCTCTACAGCCCTGGGTGTTATTCTTTGATGACTCAAGAACGGACACTCTAGCTGGCGCGGGGATTGTTTTGGAGAACCCGGCCGGTGATCGTTTCTCTTATTCTTTCCAGCTCACGTTCCAATGTACTAATAATCAGGCTAAGTATGAAGCTCTTATCATTGGGCTCGAAGTCTTGCTGGAAATGGGCGTCCGGGACATTCAGATTCGCGGCGACTCTCAGCTCGTTATTAATCAACTCCAGGGAAAATATCGCTGTGCGAGTTGGCTGCTCATCCCATATCTGAATCGCGCCATTGAGCTTCTGGACCAATGTACCGATGTTGATATGGAATATATACCACGTGAACGTAACTTTGCAGCTAATGAGCTCGCTCAGTTGGCTACAGGCATCACCTTGAAGTACGGAGTGCGCGAGCGCATTTTGAAAGTTGAGCGTCGCACACTACCTTCGTGGCTTGCTCGACCTGATCCGCCAGACGACCCCACGGTTGCGGTACTAGAACCTATTGATGTAGATTGGCGGATTCCACTGATTGAGTACCTCAAACAACCAGACCCCAGAGCTGACAGGAGGGTTCGTTTCCTCGCATTGAATTACTTCCTTCGAGGTGATGAGTTGCGACGACGTGGGGAGGATGGTATAGATTTCCGATGTGTCTATGGTCGCGAAGCCAAGAGATTGATGCGCGAGGTGCACACGGGGATATGTGGATCCCATCAGGCTGGACCTAAGATGCGTTGGCTTCTGCGACGTCATGGTTATTATTGGCCCAGCATTTTGAAGGATTGTATTTTTTTTGCAAAAGGCTGTGAGGACTGTCAAGCACATGGTCCAGTCCAGCATGTTCCTAACATTCCTATGCAACCTATTATTAAACCTTGGCCTGGGCGAGGCTGGGCACTGGACTTGATTGGGATGATCCATCCTCATTCTTCCCTGCAGCACAAGTTTATCATTGTCGCCACTGACTACTTCAAGAAATGGGTTAAAGCAGAGCCTCTGAAGGAGGCCTCAGGCGCTACCATTTGCCAGTTTATTTTCAGTAATATTCTCTGCAGGTTTGGTATCCCTGAAGTACTGGTTTCGGACAGGGGGGCAGCGTTCATGGGAGGCCCCGTCGAGGAGCTGGTCAATGATTTTGGCATTCAATTCATACATAGTACTCCGTATTATGCTCAATCTAATGGTCAGGCGGAGGCTAGCAACAAGACAATCATCACCTTACTAAAGAAAATGTTGGTAGAGAACCCTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

534

Amino Acids

61.08

Weight (kDa)

8.28

Isoelectric Point (pI)

35.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_3 PF13456 129 - 242 1.3e-17 Reverse transcriptase-like
Integrase_H2C2 PF17921 339 - 392 1.8e-07 Integrase zinc binding domain
rve PF00665 411 - 507 3.4e-07 Integrase core domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000160)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g11612 FvH4_2g25851 FvH4_3g22802 FvH4_3g22805 FvH4_3g31361 FvH4_3g31382 FvH4_4g05272 FvH4_4g05273 FvH4_4g14567 FvH4_4g15161 FvH4_5g22540 FvH4_6g13113 FvH4_6g31923 FvH4_6g31924 FvH4_6g33651 FvH4_6g45122 FvH4_7g03662
pyrus_communis pycom01g04240 pycom01g24010 pycom02g18210 pycom02g19420 pycom05g06510 pycom09g15750 pycom09g18940 pycom12g02580 pycom12g03100 pycom12g08310 pycom13g22710 pycom13g28060 pycom16g18340 pycom16g18350 pycom16g24880 pycom16g26240 pycom461g00260 pycom520g00980 pycom520g01320
rosa_chinensis RchiOBHm_Chr1g0320731 RchiOBHm_Chr2g0102771 RchiOBHm_Chr3g0462151 RchiOBHm_Chr5g0038141 RchiOBHm_Chr5g0069371 RchiOBHm_Chr7g0239101
rosa_multiflora Rmu_co8038252.1_g000001 Rmu_co8138412.1_g000001 Rmu_co8331087.1_g000001 Rmu_co8479311.1_g000001 Rmu_sc0000112.1_g000018 Rmu_sc0000346.1_g000012 Rmu_sc0002102.1_g000002 Rmu_sc0003505.1_g000013 Rmu_sc0004249.1_g000007 Rmu_sc0004448.1_g000010 Rmu_sc0004594.1_g000011 Rmu_sc0004915.1_g000010 Rmu_sc0008019.1_g000019 Rmu_sc0008303.1_g000001 Rmu_sc0008355.1_g000005 Rmu_sc0009253.1_g000018 Rmu_sc0010211.1_g000002 Rmu_sc0010252.1_g000009 Rmu_sc0011534.1_g000008 Rmu_sc0014811.1_g000009 Rmu_sc0019475.1_g000001 Rmu_sc0024897.1_g000001 Rmu_sc0024898.1_g000001 Rmu_sc0031791.1_g000001 Rmu_sc0038715.1_g000001
rosa_roxburghii Rroxscaffold_165G00436940 Rroxscaffold_174G00435270 Rroxscaffold_177G00434330 Rroxscaffold_177G00434340 Rroxscaffold_177G00434350 Rroxscaffold_1G00002160 Rroxscaffold_1G00025260 Rroxscaffold_1G00042950 Rroxscaffold_1G00068010 Rroxscaffold_2G00107530 Rroxscaffold_3G00221190 Rroxscaffold_3G00221520 Rroxscaffold_3G00223200 Rroxscaffold_4G00322230 Rroxscaffold_4G00331810 Rroxscaffold_5G00385150 Rroxscaffold_5G00387510 Rroxscaffold_6G00410520 Rroxscaffold_6G00423360 Rroxscaffold_6G00423370 Rroxscaffold_6G00429210 Rroxscaffold_7G00158300 Rroxscaffold_7G00163480 Rroxscaffold_7G00171410 Rroxscaffold_7G00178940 Rroxscaffold_7G00199480 Rroxscaffold_7G00205630 Rroxscaffold_7G00207440
rosa_rugosa Rorug01G0056400 Rorug04G0063900 Rorug05G0251400 Rorug07G0221900
rosa_samantha Rh1DG169400 Rh2AG292900 Rh2DG519200 Rh4DG260600 Rh5AG042600 Rh6BG117500
rosa_wichuraiana Rw0G001900 Rw0G005150 Rw0G006380 Rw0G015140 Rw0G016320 Rw0G019440 Rw0G019840 Rw0G023740 Rw1G001590 Rw1G002180 Rw1G003560 Rw1G004280 Rw1G006110 Rw1G006680 Rw1G007920 Rw1G008480 Rw1G009120 Rw1G010310 Rw1G014900 Rw1G019650 Rw1G022070 Rw1G022170 Rw1G041570 Rw2G002740 Rw2G005760 Rw2G032370 Rw2G046770 Rw2G050600 Rw2G051420 Rw3G015930 Rw3G016280 Rw3G019580 Rw3G028420 Rw4G003430 Rw4G005350 Rw4G007530 Rw4G008150 Rw4G009580 Rw4G010250 Rw4G015800 Rw4G017000 Rw4G017910 Rw4G018510 Rw4G019700 Rw4G031010 Rw5G012650 Rw5G020140 Rw5G022060 Rw5G034420 Rw5G035560 Rw5G043010 Rw5G046750 Rw5G047340 Rw5G049500 Rw6G001390 Rw6G002210 Rw6G004530 Rw6G004770 Rw6G005100 Rw6G005890 Rw6G011860 Rw6G014680 Rw6G019480 Rw6G028970 Rw6G033800 Rw7G013050 Rw7G014800 Rw7G025760 Rw7G025850 Rw7G026730 Rw7G026870 Rw7G036330 Rw7G036430 Rw7G039320 Rw7G039510 Rw7G039560 Rw7G041370 Rw7G042050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1102
Acc36I ACCTGC 1 cut(s) 1395
AccII CGCG 6 cut(s) 404, 555, 636, 759, 1014, 1035
AciI CCGC 8 cut(s) 133, 239, 404, 555, 818, 839, 868, 1541
AclWI GGATC 4 cut(s) 809, 1053, 1066, 1261
AcoI YGGCCR 1 cut(s) 426
AcuI CTGAAG 3 cut(s) 278, 1370, 1440
AcvI CACGTG 2 cut(s) 72, 689
AcyI GRCGYC 2 cut(s) 534, 1099
AfiI CCNNNNNNNGG 4 cut(s) 125, 1232, 1238, 1468
AflIII ACRYGT 2 cut(s) 54, 105
AgsI TTSAA 6 cut(s) 745, 772, 940, 1129, 1324, 1496
AjiI CACGTC 1 cut(s) 974
AjnI CCWGG 3 cut(s) 356, 585, 1231
Alw21I GWGCWC 2 cut(s) 717, 1044
Alw44I GTGCAC 1 cut(s) 1040
AlwI GGATC 4 cut(s) 809, 1053, 1066, 1261
AoxI GGCC 7 cut(s) 116, 130, 426, 1115, 1229, 1356, 1459
ApaLI GTGCAC 1 cut(s) 1040
ApeKI GCWGC 4 cut(s) 613, 704, 1288, 1445
AseI ATTAAT 1 cut(s) 576
Asp700I GAANNNNTTC 1 cut(s) 944
AspLEI GCGC 7 cut(s) 157, 404, 638, 759, 765, 1035, 1367
AspS9I GGNCC 5 cut(s) 652, 1073, 1116, 1178, 1460
AsuC2I CCSGG 3 cut(s) 115, 425, 539
AsuHPI GGTGA 4 cut(s) 443, 730, 968, 1558
AsuNHI GCTAGC 1 cut(s) 1547
AvaII GGWCC 3 cut(s) 652, 1073, 1178
AxyI CCTNAGG 1 cut(s) 1360
BaeGI GKGCMC 2 cut(s) 1044, 1249
BaeI ACNNNNGTAYC 2 cut(s) 643, 676
BamHI GGATCC 1 cut(s) 1058
BanII GRGCYC 2 cut(s) 513, 717
BbrPI CACGTG 2 cut(s) 72, 689
Bbv12I GWGCWC 2 cut(s) 717, 1044
BbvI GCAGC 4 cut(s) 600, 716, 1300, 1457
BccI CCATC 4 cut(s) 240, 977, 1071, 1278
BcgI CGANNNNNNTGC 2 cut(s) 595, 629
BciT130I CCWGG 3 cut(s) 358, 587, 1233
BciVI GTATCC 1 cut(s) 1424
BcnI CCSGG 3 cut(s) 115, 425, 539
BfaI CTAG 6 cut(s) 224, 242, 296, 395, 845, 1548
BfmI CTRYAG 4 cut(s) 350, 729, 1286, 1402
BfoI RGCGCY 2 cut(s) 158, 1368
BfuAI ACCTGC 1 cut(s) 1395
BfuI GTATCC 1 cut(s) 1424
BglI GCCNNNNNGGC 1 cut(s) 138
BisI GCNGC 6 cut(s) 133, 556, 614, 705, 1289, 1446
BlsI GCNGC 6 cut(s) 134, 557, 615, 706, 1290, 1447
BmcAI AGTACT 3 cut(s) 26, 1425, 1510
Bme1390I CCNGG 6 cut(s) 115, 358, 425, 539, 587, 1233
Bme18I GGWCC 3 cut(s) 652, 1073, 1178
BmgBI CACGTC 1 cut(s) 974
BmgT120I GGNCC 5 cut(s) 652, 1073, 1116, 1178, 1460
BmiI GGNNCC 2 cut(s) 1060, 1462
BmrFI CCNGG 6 cut(s) 115, 358, 425, 539, 587, 1233
BmrI ACTGGG 1 cut(s) 16
BmsI GCATC 4 cut(s) 84, 744, 1020, 1071
BmtI GCTAGC 1 cut(s) 1551
BmuI ACTGGG 1 cut(s) 16
BpmI CTGGAG 1 cut(s) 569
BpuEI CTTGAG 1 cut(s) 364
BpuMI CCSGG 3 cut(s) 115, 425, 539
BsaAI YACGTR 2 cut(s) 72, 689
BsaHI GRCGYC 2 cut(s) 534, 1099
BsaJI CCNNGG 6 cut(s) 356, 357, 586, 831, 1226, 1232
BsaXI ACNNNNNCTCC 4 cut(s) 910, 940, 1449, 1479
Bsc4I CCNNNNNNNGG 4 cut(s) 125, 1232, 1238, 1468
Bse118I RCCGGY 1 cut(s) 428
Bse1I ACTGG 5 cut(s) 22, 1181, 1254, 1378, 1431
Bse21I CCTNAGG 1 cut(s) 1360
BseBI CCWGG 3 cut(s) 358, 587, 1233
BseDI CCNNGG 6 cut(s) 356, 357, 586, 831, 1226, 1232
BseGI GGATG 5 cut(s) 232, 618, 988, 1269, 1270
BseLI CCNNNNNNNGG 4 cut(s) 125, 1232, 1238, 1468
BseMII CTCAG 5 cut(s) 98, 306, 578, 734, 1374
BseNI ACTGG 5 cut(s) 22, 1181, 1254, 1378, 1431
BseRI GAGGAG 1 cut(s) 1484
BseSI GKGCMC 2 cut(s) 1044, 1249
BseX3I CGGCCG 1 cut(s) 426
BseXI GCAGC 4 cut(s) 600, 716, 1300, 1457
BseYI CCCAGC 2 cut(s) 1118, 1242
Bsh1236I CGCG 6 cut(s) 404, 555, 636, 759, 1014, 1035
Bsh1285I CGRYCG 1 cut(s) 429
BshFI GGCC 7 cut(s) 118, 132, 428, 1117, 1231, 1358, 1461
BsiEI CGRYCG 1 cut(s) 429
BsiHKAI GWGCWC 2 cut(s) 717, 1044
BsiSI CCGG 4 cut(s) 115, 425, 429, 538
BslFI GGGAC 2 cut(s) 97, 554
BslI CCNNNNNNNGG 4 cut(s) 125, 1232, 1238, 1468
BsmFI GGGAC 2 cut(s) 97, 554
BsmI GAATGC 1 cut(s) 1491
BsnI GGCC 7 cut(s) 118, 132, 428, 1117, 1231, 1358, 1461
Bsp1286I GDGCHC 4 cut(s) 513, 717, 1044, 1249
Bsp143I GATC 5 cut(s) 342, 433, 814, 1058, 1266
Bsp68I TCGCGA 1 cut(s) 1014
BspACI CCGC 8 cut(s) 133, 239, 404, 555, 818, 839, 868, 1541
BspANI GGCC 7 cut(s) 118, 132, 428, 1117, 1231, 1358, 1461
BspCNI CTCAG 5 cut(s) 97, 307, 577, 733, 1373
BspFNI CGCG 6 cut(s) 404, 555, 636, 759, 1014, 1035
BspLI GGNNCC 2 cut(s) 1060, 1462
BspMAI CTGCAG 2 cut(s) 1290, 1406
BspMI ACCTGC 1 cut(s) 1395
BspOI GCTAGC 1 cut(s) 1551
BspPI GGATC 4 cut(s) 809, 1053, 1066, 1261
BsrFI RCCGGY 1 cut(s) 428
BsrI ACTGG 5 cut(s) 22, 1181, 1254, 1378, 1431
BssAI RCCGGY 1 cut(s) 428
BssECI CCNNGG 6 cut(s) 356, 357, 586, 831, 1226, 1232
BssMI GATC 5 cut(s) 342, 433, 814, 1058, 1266
BssNI GRCGYC 2 cut(s) 534, 1099
BssT1I CCWWGG 1 cut(s) 1226
Bst2UI CCWGG 3 cut(s) 358, 587, 1233
Bst4CI ACNGT 2 cut(s) 835, 1166
BstACI GRCGYC 2 cut(s) 534, 1099
BstBAI YACGTR 2 cut(s) 72, 689
BstC8I GCNNGC 8 cut(s) 37, 207, 277, 400, 717, 761, 804, 1549
BstDEI CTNAG 7 cut(s) 84, 315, 486, 564, 720, 1077, 1360
BstDSI CCRYGG 1 cut(s) 831
BstENI CCTNNNNNAGG 1 cut(s) 1236
BstF5I GGATG 5 cut(s) 232, 618, 988, 1269, 1270
BstFNI CGCG 6 cut(s) 404, 555, 636, 759, 1014, 1035
BstH2I RGCGCY 2 cut(s) 158, 1368
BstHHI GCGC 7 cut(s) 157, 404, 638, 759, 765, 1035, 1367
BstKTI GATC 5 cut(s) 345, 436, 817, 1061, 1269
BstMBI GATC 5 cut(s) 342, 433, 814, 1058, 1266
BstMCI CGRYCG 1 cut(s) 429
BstMWI GCNNNNNNNGC 4 cut(s) 138, 725, 1039, 1364
BstNI CCWGG 3 cut(s) 358, 587, 1233
BstNSI RCATGY 3 cut(s) 58, 109, 1193
BstSCI CCNGG 6 cut(s) 113, 356, 423, 537, 585, 1231
BstSFI CTRYAG 4 cut(s) 350, 729, 1286, 1402
BstSLI GKGCMC 2 cut(s) 1044, 1249
BstUI CGCG 6 cut(s) 404, 555, 636, 759, 1014, 1035
BstV1I GCAGC 4 cut(s) 600, 716, 1300, 1457
BstX2I RGATCY 1 cut(s) 1058
BstXI CCANNNNNNTGG 1 cut(s) 1070
BstYI RGATCY 1 cut(s) 1058
BstZI CGGCCG 1 cut(s) 426
Bsu36I CCTNAGG 1 cut(s) 1360
BsuI GTATCC 1 cut(s) 1424
BsuRI GGCC 7 cut(s) 118, 132, 428, 1117, 1231, 1358, 1461
BtgI CCRYGG 1 cut(s) 831
BtgZI GCGATG 1 cut(s) 64
BtrI CACGTC 1 cut(s) 974
BtsCI GGATG 5 cut(s) 232, 618, 988, 1269, 1270
BtsIMutI CAGTG 3 cut(s) 875, 1247, 1311
BtuMI TCGCGA 1 cut(s) 1014
BveI ACCTGC 1 cut(s) 1395
Cac8I GCNNGC 8 cut(s) 37, 207, 277, 400, 717, 761, 804, 1549
CfoI GCGC 7 cut(s) 157, 404, 638, 759, 765, 1035, 1367
Cfr10I RCCGGY 1 cut(s) 428
Cfr13I GGNCC 5 cut(s) 652, 1073, 1116, 1178, 1460
CseI GACGC 2 cut(s) 523, 770
CviAII CATG 6 cut(s) 55, 106, 1103, 1175, 1190, 1453
DdeI CTNAG 7 cut(s) 84, 315, 486, 564, 720, 1077, 1360
DpnI GATC 5 cut(s) 344, 435, 816, 1060, 1268
DpnII GATC 5 cut(s) 342, 433, 814, 1058, 1266
EaeI YGGCCR 1 cut(s) 426
EagI CGGCCG 1 cut(s) 426
EciI GGCGGA 3 cut(s) 807, 883, 1556
Ecl136II GAGCTC 1 cut(s) 715
EclXI CGGCCG 1 cut(s) 426
Eco130I CCWWGG 1 cut(s) 1226
Eco147I AGGCCT 1 cut(s) 1358
Eco24I GRGCYC 2 cut(s) 513, 717
Eco47I GGWCC 3 cut(s) 652, 1073, 1178
Eco52I CGGCCG 1 cut(s) 426
Eco53kI GAGCTC 1 cut(s) 715
Eco57I CTGAAG 3 cut(s) 278, 1370, 1440
Eco72I CACGTG 2 cut(s) 72, 689
Eco81I CCTNAGG 1 cut(s) 1360
EcoICRI GAGCTC 1 cut(s) 715
EcoNI CCTNNNNNAGG 1 cut(s) 1236
EcoO109I RGGNCCY 1 cut(s) 1460
EcoRII CCWGG 3 cut(s) 356, 585, 1231
EcoT14I CCWWGG 1 cut(s) 1226
EcoT38I GRGCYC 2 cut(s) 513, 717
ErhI CCWWGG 1 cut(s) 1226
FaeI CATG 6 cut(s) 58, 109, 1106, 1178, 1193, 1456
FaqI GGGAC 2 cut(s) 97, 554
FatI CATG 6 cut(s) 54, 105, 1102, 1174, 1189, 1452
FauI CCCGC 1 cut(s) 397
Fnu4HI GCNGC 6 cut(s) 133, 556, 614, 705, 1289, 1446
FokI GGATG 5 cut(s) 219, 605, 995, 1257, 1276
FriOI GRGCYC 2 cut(s) 513, 717
Fsp4HI GCNGC 6 cut(s) 133, 556, 614, 705, 1289, 1446
FspBI CTAG 6 cut(s) 224, 242, 296, 395, 845, 1548
GlaI GCGC 7 cut(s) 156, 403, 637, 758, 764, 1034, 1366
GluI GCNGC 6 cut(s) 133, 556, 614, 705, 1289, 1446
GsaI CCCAGC 2 cut(s) 1122, 1246
GsuI CTGGAG 1 cut(s) 569
HaeII RGCGCY 2 cut(s) 158, 1368
HaeIII GGCC 7 cut(s) 118, 132, 428, 1117, 1231, 1358, 1461
HapII CCGG 4 cut(s) 115, 425, 429, 538
HgaI GACGC 2 cut(s) 523, 770
HhaI GCGC 7 cut(s) 157, 404, 638, 759, 765, 1035, 1367
Hin1I GRCGYC 2 cut(s) 534, 1099
Hin1II CATG 6 cut(s) 58, 109, 1106, 1178, 1193, 1456
Hin6I GCGC 7 cut(s) 155, 402, 636, 757, 763, 1033, 1365
HinP1I GCGC 7 cut(s) 155, 402, 636, 757, 763, 1033, 1365
HinfI GANTC 6 cut(s) 289, 377, 550, 560, 631, 871
HpaII CCGG 4 cut(s) 115, 425, 429, 538
HphI GGTGA 4 cut(s) 443, 730, 968, 1558
Hpy166II GTNNAC 2 cut(s) 692, 1042
Hpy188I TCNGA 7 cut(s) 87, 163, 549, 630, 998, 1350, 1435
Hpy188III TCNNGA 4 cut(s) 381, 650, 1013, 1324
Hpy8I GTNNAC 2 cut(s) 692, 1042
Hpy99I CGWCG 5 cut(s) 786, 972, 975, 1101, 1469
HpyAV CCTTC 6 cut(s) 184, 253, 804, 959, 1123, 1345
HpyCH4III ACNGT 2 cut(s) 835, 1166
HpyCH4IV ACGT 6 cut(s) 71, 461, 688, 694, 973, 1099
HpyF10VI GCNNNNNNNGC 4 cut(s) 138, 725, 1039, 1364
HpyF3I CTNAG 7 cut(s) 84, 315, 486, 564, 720, 1077, 1360
HpySE526I ACGT 6 cut(s) 71, 461, 688, 694, 973, 1099
Hsp92I GRCGYC 2 cut(s) 534, 1099
Hsp92II CATG 6 cut(s) 58, 109, 1106, 1178, 1193, 1456
HspAI GCGC 7 cut(s) 155, 402, 636, 757, 763, 1033, 1365
Kzo9I GATC 5 cut(s) 342, 433, 814, 1058, 1266
LmnI GCTCC 1 cut(s) 1471
Lsp1109I GCAGC 4 cut(s) 600, 716, 1300, 1457
LweI GCATC 4 cut(s) 84, 744, 1020, 1071
MaeI CTAG 6 cut(s) 224, 242, 296, 395, 845, 1548
MaeII ACGT 6 cut(s) 71, 461, 688, 694, 973, 1099
MaeIII GTNAC 1 cut(s) 695
MalI GATC 5 cut(s) 344, 435, 816, 1060, 1268
MboI GATC 5 cut(s) 342, 433, 814, 1058, 1266
MboII GAAGA 1 cut(s) 1272
MflI RGATCY 1 cut(s) 1058
MhlI GDGCHC 4 cut(s) 513, 717, 1044, 1249
MluCI AATT 2 cut(s) 940, 1496
MlyI GAGTC 3 cut(s) 283, 371, 554
MroXI GAANNNNTTC 1 cut(s) 944
MseI TTAA 3 cut(s) 576, 1221, 1335
MslI CAYNNNNRTG 1 cut(s) 1205
MspI CCGG 4 cut(s) 115, 425, 429, 538
MspR9I CCNGG 6 cut(s) 115, 358, 425, 539, 587, 1233
Mva1269I GAATGC 1 cut(s) 1491
MvaI CCWGG 3 cut(s) 358, 587, 1233
MvnI CGCG 6 cut(s) 404, 555, 636, 759, 1014, 1035
MwoI GCNNNNNNNGC 4 cut(s) 138, 725, 1039, 1364
NciI CCSGG 3 cut(s) 115, 425, 539
NdeII GATC 5 cut(s) 342, 433, 814, 1058, 1266
NheI GCTAGC 1 cut(s) 1547
NlaIII CATG 6 cut(s) 58, 109, 1106, 1178, 1193, 1456
NlaIV GGNNCC 2 cut(s) 1060, 1462
NruI TCGCGA 1 cut(s) 1014
NspI RCATGY 3 cut(s) 58, 109, 1193
PasI CCCWGGG 1 cut(s) 357
PceI AGGCCT 1 cut(s) 1358
PciI ACATGT 2 cut(s) 54, 105
PcsI WCGNNNNNNNCGW 2 cut(s) 87, 756
PctI GAATGC 1 cut(s) 1491
PdmI GAANNNNTTC 1 cut(s) 944
PfeI GAWTC 3 cut(s) 550, 631, 871
PfoI TCCNGGA 1 cut(s) 537
PkrI GCNGC 6 cut(s) 134, 557, 615, 706, 1290, 1447
PleI GAGTC 3 cut(s) 283, 371, 554
PmaCI CACGTG 2 cut(s) 72, 689
PmlI CACGTG 2 cut(s) 72, 689
PpsI GAGTC 3 cut(s) 283, 371, 554
Ppu21I YACGTR 2 cut(s) 72, 689
PscI ACATGT 2 cut(s) 54, 105
PshBI ATTAAT 1 cut(s) 576
Psp124BI GAGCTC 1 cut(s) 717
Psp6I CCWGG 3 cut(s) 356, 585, 1231
PspCI CACGTG 2 cut(s) 72, 689
PspFI CCCAGC 2 cut(s) 1118, 1242
PspGI CCWGG 3 cut(s) 356, 585, 1231
PspN4I GGNNCC 2 cut(s) 1060, 1462
PspPI GGNCC 5 cut(s) 652, 1073, 1116, 1178, 1460
PstI CTGCAG 2 cut(s) 1290, 1406
PsuI RGATCY 1 cut(s) 1058
RruI TCGCGA 1 cut(s) 1014
RseI CAYNNNNRTG 1 cut(s) 1205
SacI GAGCTC 1 cut(s) 717
SaqAI TTAA 3 cut(s) 576, 1221, 1335
SatI GCNGC 6 cut(s) 133, 556, 614, 705, 1289, 1446
Sau3AI GATC 5 cut(s) 342, 433, 814, 1058, 1266
Sau96I GGNCC 5 cut(s) 652, 1073, 1116, 1178, 1460
ScaI AGTACT 3 cut(s) 26, 1425, 1510
SchI GAGTC 3 cut(s) 283, 371, 554
ScrFI CCNGG 6 cut(s) 115, 358, 425, 539, 587, 1233
SduI GDGCHC 4 cut(s) 513, 717, 1044, 1249
SfaNI GCATC 4 cut(s) 84, 744, 1020, 1071
SfcI CTRYAG 4 cut(s) 350, 729, 1286, 1402
SinI GGWCC 3 cut(s) 652, 1073, 1178
SmiMI CAYNNNNRTG 1 cut(s) 1205
SmlI CTYRAG 1 cut(s) 379
SmoI CTYRAG 1 cut(s) 379
Sse9I AATT 2 cut(s) 940, 1496
SseBI AGGCCT 1 cut(s) 1358
SsiI CCGC 8 cut(s) 133, 239, 404, 555, 818, 839, 868, 1541
SspI AATATT 1 cut(s) 1396
SspMI CTAG 6 cut(s) 224, 242, 296, 395, 845, 1548
SstI GAGCTC 1 cut(s) 717
StuI AGGCCT 1 cut(s) 1358
StyD4I CCNGG 6 cut(s) 113, 356, 423, 537, 585, 1231
StyI CCWWGG 1 cut(s) 1226
TaaI ACNGT 2 cut(s) 835, 1166
TaiI ACGT 6 cut(s) 74, 464, 691, 697, 976, 1102
TaqI TCGA 6 cut(s) 292, 513, 808, 952, 1467, 1600
TaqII GACCGA 1 cut(s) 104
TasI AATT 2 cut(s) 940, 1496
TatI WGTACW 4 cut(s) 24, 470, 1423, 1508
TauI GCSGC 2 cut(s) 135, 558
TfiI GAWTC 3 cut(s) 550, 631, 871
Tru1I TTAA 3 cut(s) 576, 1221, 1335
Tru9I TTAA 3 cut(s) 576, 1221, 1335
TscAI CASTG 3 cut(s) 882, 1254, 1318
TseI GCWGC 4 cut(s) 613, 704, 1288, 1445
TspDTI ATGAA 3 cut(s) 507, 1441, 1489
TspGWI ACGGA 3 cut(s) 401, 765, 1503
TspRI CASTG 3 cut(s) 882, 1254, 1318
VneI GTGCAC 1 cut(s) 1040
VpaK11BI GGWCC 3 cut(s) 652, 1073, 1178
VspI ATTAAT 1 cut(s) 576
XagI CCTNNNNNAGG 1 cut(s) 1236
XceI RCATGY 3 cut(s) 58, 109, 1193
XcmI CCANNNNNNNNNTGG 1 cut(s) 646
XmnI GAANNNNTTC 1 cut(s) 944
XspI CTAG 6 cut(s) 224, 242, 296, 395, 845, 1548
ZraI GACGTC 1 cut(s) 1100
ZrmI AGTACT 3 cut(s) 26, 1425, 1510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.