Rw2G046770

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000160
Physical Location & Seq
Reverse (-)
74151781 .. 74155180
3400 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G046770.1

Sequence Viewer

Length: 2790 bp
ATGGATTACGACCTCGCGGAGGAGGGGATAGAGGCCTTCCACTCGATACATGAACGGCTGTCATCATACATGGTGGAAAAAGAAGCTTATGATCGCATCGCGACCTTAGAGGTCGTTAATGAAGAACTTTCTGACCCGGAGGATGAAGATGAAGTCAATATTCAACTCGCCCTGGCAGCGCTGGACGACACACCTCCCAAAGTTAAAGACCATACTGAGAAGGTTAATCTGGGCACAGTGGACGAGCCTATGGAGGTATCTATCAGCGCTTATCTAGAGCCTAGCGAGAAACAGAGGCTCACCGAATTACTATTAGAGTTTAAAGACTGCTTCGCAGAAAAATATGAAGACATGCCCGGCCTGTCACCAGATTTGGTTTGTCATCAACTACCAACTCTTCCTGACAAGAGGCCCGTCAAGCAGGAACCTCGACGAATGAATTCGGAGACCCAGATTCTTGTAAAGGAAGAGGTCGAAAAAATGCACAAGTCAGGTATTATAAGGGTCGCCAAGTATAATCAGTGGCTATCTAATATGGTGCCTGTCCGAAAAAAGAATGGCAAGATGAGAGTCTGCGTTGATTATAGGGACTTGAATCTCGCTACACGTAAAGACGTTTACCCCATGCCGGTCGCGGATATGTTGGTAGATGCGATGGCAGGCCATGAGTTGTTGTCCTTCATGGACGGTACTGCAGGATATCACCAGATTCCGGTCGCTGAAGAAGACAGACACAAGACCGCTTTCCGCTGCCCTGGCTTCGCAGGAGTCTTTGAATATGTGGTCATGCCGTTTGGCCTGAAGAATGCTGGTGCGACGTATCAGAGAGCCATGAATTTGATCTTCCACGACATACTGGGAAAGGTTTTAGAGGTGTACATTGATGACGTAGTCGTCAAGTCTCAGAAGAAAGGGGATCACATCGCGGATCTCAGGAAAGTATTTGAGCGTATGCGCAGACATAGACTCAAGATGAACCCGGCCAAGCGTGTGTTTGGGGTCCAGGCAGGAGACTTTCTGGGGTTTATAGTTCATCAGCGAGGAATTGAGGTCCCTGAAGACAAGGCAAGCGCAGTCATTAATGCATCTCCCTCGCGGACGAAAAAGGAATTACAGCGTCTGTTGGCAGACTTCCTCGCCCATCATCCTACAATAGAGATACCCACGCTGAAGGAGTTAGAGATAGCCTCCACCACTACAACTCGACCAGATTTGGTGTGTGTCCCTGAGTACGCGGTCTGGTACCAAGCTACGGTCTCTCTGCAACCTTGGGTATTATTCTTTGATGGCTCAAGAACTGACACATTGGCTGGGGCAGGAATTGTTTTGGCAAACCCAGCCGGTGATCGCTTCTCTTATTCATTCCATCTAGAATTCCAGTGTACTAATAATCAGGCTGAATATGAAGCTCTTATCATTGGACTAGAAATCTTACTGGAAATGGGCGTGCGGGACGTTCAAATTCGTGGCGATTCTCAGCTCGTTATAAACCAGCTCCAGGAAAAATATCGCTGTGCGAGTTGGTTACTCGTACCATACCTGAATCGCGCCATAGAGCTTTTGGACCAATTTACAGATGTCGATCTGGAACATATACCACGCGAGCGTAACTTTGCAGCTAATGAGCTCGCTCAGTTGGCCACAGGCATTACATTGAAGTATGGAATGCGCGAGCGCATCTTGAAAGTTGAGCGTCGCACATTACCCTCATGGCTTGCACGATCTGATCCACCAGATGATCCCGTAGTGGCGGCGCTAGACCCTATTGATGTGGATTGGCGAATCCCATTGGTTGAGTACCTCAAACAACCAGACCCCAGAGCTGACAGGAAGATTCGTTTCCTCGCGCTAAATTACTTCCTTAGAGGTGACAAGTTGCGACGATGTGGGGAGGATGGTATAGACTTTCATTGTGTCTATGGCCGTGAAGCTAAACGTTTGATGCGCGAAGTCCATACAGGAATATGTGGGGCCCATCAAGCGGGGCCTAAGATGCGCTGGCTTCTGCGACGTCATGGCTATTACTGGCCCAACATTTTAAAGGATTGTATCGCATTTGCCAAAGGTTGTGCGGACTGTCAAGCGCATGGTCCAGTCCAGCATATTCCTAACATTCCTATGCAGCCTATCATTAAACCTTGGCCTACGCGAGGCTGGGCACTGGACTTGATTGGGATGATCCATCCTCATTCTTCCCTTCAGCACAAGTTTATCATCGTCGCCACTGACTACTTCACTAAATGGGTCGAGGAGGAGCCTTTGAAAGAAGCTTCCGGGGGGGCAGCGTTCATGGGAGGCCCGGTCGAGGAACTGGTCAATGATTTTGGCATCCAATTCATACATAGCACTCCGTATTATGCTCAATCTAATGGACAAGCGGAAGCTAGCAACAAGACCATCATCACCTTGCTAAAGAAGATGTTGATAGAGAACCCTCGGCAATGGCATGACACTTTATATGAGAAACTATGGGCCTATCGCACTTCTAAACGGAATCCCACTGCAACAACGCCGTACGCCCTGATGTTTGGTCATGATGCGGTCTTACCATTGGAAATTAACGTCCATTCCCTCCGCGTGCAAGAACAGCATCATTTGATTGGCGAAGATTACGTTCAAGCTATGTGGCAGGAACACGAAGATTTAAGCGAGCAGCGCTTGGCGGCGTTGGACAATTTGGTGATGGAAAAACAGCGTATCGCACGCGCCTATGATAAGAGGACGCGTGGTCGTAGTTACAAAGAGGGCGACTCGTTTGGAAGGCCATCTTACCCTTGGGCGAAAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

929

Amino Acids

106.37

Weight (kDa)

6.01

Isoelectric Point (pI)

41.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_1 PF00078 182 - 344 3.3e-31 Reverse transcriptase (RNA-dependent DNA polymerase)
RNase_H PF00075 425 - 538 9.4e-06 RNase H
RVT_3 PF13456 428 - 546 5.5e-21 Reverse transcriptase-like
Integrase_H2C2 PF17921 643 - 696 1e-07 Integrase zinc binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000160)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g11612 FvH4_2g25851 FvH4_3g22802 FvH4_3g22805 FvH4_3g31361 FvH4_3g31382 FvH4_4g05272 FvH4_4g05273 FvH4_4g14567 FvH4_4g15161 FvH4_5g22540 FvH4_6g13113 FvH4_6g31923 FvH4_6g31924 FvH4_6g33651 FvH4_6g45122 FvH4_7g03662
pyrus_communis pycom01g04240 pycom01g24010 pycom02g18210 pycom02g19420 pycom05g06510 pycom09g15750 pycom09g18940 pycom12g02580 pycom12g03100 pycom12g08310 pycom13g22710 pycom13g28060 pycom16g18340 pycom16g18350 pycom16g24880 pycom16g26240 pycom461g00260 pycom520g00980 pycom520g01320
rosa_chinensis RchiOBHm_Chr1g0320731 RchiOBHm_Chr2g0102771 RchiOBHm_Chr3g0462151 RchiOBHm_Chr5g0038141 RchiOBHm_Chr5g0069371 RchiOBHm_Chr7g0239101
rosa_multiflora Rmu_co8038252.1_g000001 Rmu_co8138412.1_g000001 Rmu_co8331087.1_g000001 Rmu_co8479311.1_g000001 Rmu_sc0000112.1_g000018 Rmu_sc0000346.1_g000012 Rmu_sc0002102.1_g000002 Rmu_sc0003505.1_g000013 Rmu_sc0004249.1_g000007 Rmu_sc0004448.1_g000010 Rmu_sc0004594.1_g000011 Rmu_sc0004915.1_g000010 Rmu_sc0008019.1_g000019 Rmu_sc0008303.1_g000001 Rmu_sc0008355.1_g000005 Rmu_sc0009253.1_g000018 Rmu_sc0010211.1_g000002 Rmu_sc0010252.1_g000009 Rmu_sc0011534.1_g000008 Rmu_sc0014811.1_g000009 Rmu_sc0019475.1_g000001 Rmu_sc0024897.1_g000001 Rmu_sc0024898.1_g000001 Rmu_sc0031791.1_g000001 Rmu_sc0038715.1_g000001
rosa_roxburghii Rroxscaffold_165G00436940 Rroxscaffold_174G00435270 Rroxscaffold_177G00434330 Rroxscaffold_177G00434340 Rroxscaffold_177G00434350 Rroxscaffold_1G00002160 Rroxscaffold_1G00025260 Rroxscaffold_1G00042950 Rroxscaffold_1G00068010 Rroxscaffold_2G00107530 Rroxscaffold_3G00221190 Rroxscaffold_3G00221520 Rroxscaffold_3G00223200 Rroxscaffold_4G00322230 Rroxscaffold_4G00331810 Rroxscaffold_5G00385150 Rroxscaffold_5G00387510 Rroxscaffold_6G00410520 Rroxscaffold_6G00423360 Rroxscaffold_6G00423370 Rroxscaffold_6G00429210 Rroxscaffold_7G00158300 Rroxscaffold_7G00163480 Rroxscaffold_7G00171410 Rroxscaffold_7G00178940 Rroxscaffold_7G00199480 Rroxscaffold_7G00205630 Rroxscaffold_7G00207440
rosa_rugosa Rorug01G0056400 Rorug04G0063900 Rorug05G0251400 Rorug07G0221900
rosa_samantha Rh1DG169400 Rh2AG292900 Rh2DG519200 Rh4DG260600 Rh5AG042600 Rh6BG117500
rosa_wichuraiana Rw0G001900 Rw0G005150 Rw0G006380 Rw0G015140 Rw0G016320 Rw0G019440 Rw0G019840 Rw0G023740 Rw1G001590 Rw1G002180 Rw1G003560 Rw1G004280 Rw1G006110 Rw1G006680 Rw1G007920 Rw1G008480 Rw1G009120 Rw1G010310 Rw1G014900 Rw1G019650 Rw1G022070 Rw1G022170 Rw1G041570 Rw2G002740 Rw2G005760 Rw2G032370 Rw2G046770 Rw2G050600 Rw2G051420 Rw3G015930 Rw3G016280 Rw3G019580 Rw3G028420 Rw4G003430 Rw4G005350 Rw4G007530 Rw4G008150 Rw4G009580 Rw4G010250 Rw4G015800 Rw4G017000 Rw4G017910 Rw4G018510 Rw4G019700 Rw4G031010 Rw5G012650 Rw5G020140 Rw5G022060 Rw5G034420 Rw5G035560 Rw5G043010 Rw5G046750 Rw5G047340 Rw5G049500 Rw6G001390 Rw6G002210 Rw6G004530 Rw6G004770 Rw6G005100 Rw6G005890 Rw6G011860 Rw6G014680 Rw6G019480 Rw6G028970 Rw6G033800 Rw7G013050 Rw7G014800 Rw7G025760 Rw7G025850 Rw7G026730 Rw7G026870 Rw7G036330 Rw7G036430 Rw7G039320 Rw7G039510 Rw7G039560 Rw7G041370 Rw7G042050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 500, 1487
AasI GACNNNNNNGTC 1 cut(s) 893
AatII GACGTC 1 cut(s) 2014
Acc16I TGCGCA 1 cut(s) 956
Acc65I GGTACC 1 cut(s) 1242
AccB1I GGYRCC 2 cut(s) 538, 1242
AclI AACGTT 1 cut(s) 1936
AclWI GGATC 5 cut(s) 924, 936, 1721, 1733, 2173
AcoI YGGCCR 3 cut(s) 981, 1638, 1921
AcsI RAATTY 4 cut(s) 439, 835, 1373, 1461
AcuI CTGAAG 5 cut(s) 741, 821, 1077, 1190, 2183
AcyI GRCGYC 1 cut(s) 2011
AfaI GTAC 8 cut(s) 691, 878, 1232, 1244, 1384, 1533, 1799, 2516
AfeI AGCGCT 3 cut(s) 180, 268, 2657
AfiI CCNNNNNNNGG 8 cut(s) 19, 628, 712, 1252, 1498, 1981, 2150, 2305
AflIII ACRYGT 2 cut(s) 605, 2723
AgsI TTSAA 8 cut(s) 164, 595, 776, 1460, 1657, 1684, 2263, 2618
AhdI GACNNNNNGTC 1 cut(s) 2727
AjnI CCWGG 4 cut(s) 171, 754, 1002, 1497
Alw21I GWGCWC 1 cut(s) 1629
Alw26I GTCTC 4 cut(s) 440, 906, 1005, 1261
AlwI GGATC 5 cut(s) 924, 936, 1721, 1733, 2173
AlwNI CAGNNNCTG 1 cut(s) 1120
Aor51HI AGCGCT 3 cut(s) 180, 268, 2657
ApaI GGGCCC 1 cut(s) 1975
ApeKI GCWGC 6 cut(s) 176, 750, 1616, 2122, 2282, 2653
ApoI RAATTY 4 cut(s) 439, 835, 1373, 1461
AseI ATTAAT 1 cut(s) 1080
Asp700I GAANNNNTTC 1 cut(s) 439
Asp718I GGTACC 1 cut(s) 1242
AsuC2I CCSGG 5 cut(s) 137, 357, 980, 2275, 2300
AsuHPI GGTGA 7 cut(s) 292, 357, 695, 1355, 1880, 2395, 2692
AsuNHI GCTAGC 1 cut(s) 2384
AvaII GGWCC 4 cut(s) 1000, 1051, 1564, 2090
BaeGI GKGCMC 3 cut(s) 236, 1975, 2161
BalI TGGCCA 1 cut(s) 1640
BanI GGYRCC 2 cut(s) 538, 1242
BanII GRGCYC 2 cut(s) 1629, 1975
BbsI GAAGAC 3 cut(s) 354, 732, 1065
Bbv12I GWGCWC 1 cut(s) 1629
BbvI GCAGC 6 cut(s) 188, 737, 1628, 2134, 2294, 2665
BceAI ACGGC 4 cut(s) 71, 775, 1908, 2497
BcgI CGANNNNNNTGC 4 cut(s) 410, 444, 1074, 1108
BciT130I CCWGG 4 cut(s) 173, 756, 1004, 1499
BcnI CCSGG 5 cut(s) 137, 357, 980, 2275, 2300
BcoDI GTCTC 4 cut(s) 440, 906, 1005, 1261
BfaI CTAG 6 cut(s) 275, 282, 1370, 1424, 1757, 2385
BfmI CTRYAG 1 cut(s) 693
BfoI RGCGCY 4 cut(s) 182, 270, 1757, 2659
BisI GCNGC 8 cut(s) 177, 751, 1617, 1752, 2123, 2283, 2654, 2664
BlsI GCNGC 8 cut(s) 178, 752, 1618, 1753, 2124, 2284, 2655, 2665
Bme1390I CCNGG 9 cut(s) 137, 173, 357, 756, 980, 1004, 1499, 2275, 2300
Bme18I GGWCC 4 cut(s) 1000, 1051, 1564, 2090
BmeRI GACNNNNNGTC 1 cut(s) 2727
BmiI GGNNCC 9 cut(s) 426, 540, 1001, 1053, 1244, 1972, 1973, 1986, 2256
BmrFI CCNGG 9 cut(s) 137, 173, 357, 756, 980, 1004, 1499, 2275, 2300
BmrI ACTGGG 1 cut(s) 866
BmsI GCATC 9 cut(s) 105, 640, 1094, 1686, 1932, 1983, 2337, 2527, 2599
BmtI GCTAGC 1 cut(s) 2388
BmuI ACTGGG 1 cut(s) 866
BpiI GAAGAC 3 cut(s) 354, 732, 1065
BplI GAGNNNNNCTC 4 cut(s) 1172, 1204, 2735, 2767
BpmI CTGGAG 1 cut(s) 1481
BpuEI CTTGAG 2 cut(s) 953, 1276
BpuMI CCSGG 5 cut(s) 137, 357, 980, 2275, 2300
BsaAI YACGTR 1 cut(s) 608
BsaBI GATNNNNATC 1 cut(s) 1581
BsaHI GRCGYC 1 cut(s) 2011
BsaI GGTCTC 2 cut(s) 440, 1261
BsaJI CCNNGG 7 cut(s) 171, 754, 1268, 2138, 2274, 2435, 2774
BsaWI WCCGGW 1 cut(s) 712
BsaXI ACNNNNNCTCC 2 cut(s) 2286, 2316
Bsc4I CCNNNNNNNGG 8 cut(s) 19, 628, 712, 1252, 1498, 1981, 2150, 2305
Bse118I RCCGGY 2 cut(s) 628, 1340
Bse1I ACTGG 7 cut(s) 861, 1378, 1440, 2030, 2093, 2166, 2316
Bse3DI GCAATG 1 cut(s) 2447
Bse8I GATNNNNATC 1 cut(s) 1581
BseBI CCWGG 4 cut(s) 173, 756, 1004, 1499
BseDI CCNNGG 7 cut(s) 171, 754, 1268, 2138, 2274, 2435, 2774
BseGI GGATG 6 cut(s) 148, 1144, 1900, 2181, 2182, 2328
BseJI GATNNNNATC 1 cut(s) 1581
BseLI CCNNNNNNNGG 8 cut(s) 19, 628, 712, 1252, 1498, 1981, 2150, 2305
BseMI GCAATG 1 cut(s) 2447
BseMII CTCAG 6 cut(s) 207, 917, 946, 1218, 1490, 1646
BseNI ACTGG 7 cut(s) 861, 1378, 1440, 2030, 2093, 2166, 2316
BseRI GAGGAG 3 cut(s) 35, 2264, 2267
BseSI GKGCMC 3 cut(s) 236, 1975, 2161
BseXI GCAGC 6 cut(s) 188, 737, 1628, 2134, 2294, 2665
BseYI CCCAGC 3 cut(s) 1310, 1336, 2154
Bsh1285I CGRYCG 3 cut(s) 633, 717, 2304
BshNI GGYRCC 2 cut(s) 538, 1242
BsiEI CGRYCG 3 cut(s) 633, 717, 2304
BsiHKAI GWGCWC 1 cut(s) 1629
BsiSI CCGG 8 cut(s) 137, 357, 629, 713, 980, 1341, 2274, 2300
BsiWI CGTACG 1 cut(s) 2514
BslFI GGGAC 4 cut(s) 602, 1037, 1208, 1466
BslI CCNNNNNNNGG 8 cut(s) 19, 628, 712, 1252, 1498, 1981, 2150, 2305
BsmAI GTCTC 4 cut(s) 440, 906, 1005, 1261
BsmFI GGGAC 4 cut(s) 602, 1037, 1208, 1466
BsmI GAATGC 2 cut(s) 811, 1671
Bso31I GGTCTC 2 cut(s) 440, 1261
Bsp120I GGGCCC 1 cut(s) 1971
Bsp1286I GDGCHC 4 cut(s) 236, 1629, 1975, 2161
Bsp1407I TGTACA 1 cut(s) 876
Bsp68I TCGCGA 1 cut(s) 101
BspCNI CTCAG 6 cut(s) 208, 916, 945, 1219, 1489, 1645
BspHI TCATGA 1 cut(s) 2533
BspLI GGNNCC 9 cut(s) 426, 540, 1001, 1053, 1244, 1972, 1973, 1986, 2256
BspMAI CTGCAG 1 cut(s) 697
BspOI GCTAGC 1 cut(s) 2388
BspPI GGATC 5 cut(s) 924, 936, 1721, 1733, 2173
BspT107I GGYRCC 2 cut(s) 538, 1242
BspTNI GGTCTC 2 cut(s) 440, 1261
BsrDI GCAATG 1 cut(s) 2447
BsrFI RCCGGY 2 cut(s) 628, 1340
BsrGI TGTACA 1 cut(s) 876
BsrI ACTGG 7 cut(s) 861, 1378, 1440, 2030, 2093, 2166, 2316
BssAI RCCGGY 2 cut(s) 628, 1340
BssECI CCNNGG 7 cut(s) 171, 754, 1268, 2138, 2274, 2435, 2774
BssNI GRCGYC 1 cut(s) 2011
BssT1I CCWWGG 3 cut(s) 1268, 2138, 2774
Bst2UI CCWGG 4 cut(s) 173, 756, 1004, 1499
Bst4CI ACNGT 4 cut(s) 238, 689, 1255, 2078
Bst6I CTCTTC 2 cut(s) 402, 462
BstACI GRCGYC 1 cut(s) 2011
BstAUI TGTACA 1 cut(s) 876
BstBAI YACGTR 1 cut(s) 608
BstDEI CTNAG 9 cut(s) 106, 216, 903, 932, 1227, 1476, 1632, 1862, 1989
BstENI CCTNNNNNAGG 2 cut(s) 17, 2148
BstF5I GGATG 6 cut(s) 148, 1144, 1900, 2181, 2182, 2328
BstH2I RGCGCY 4 cut(s) 182, 270, 1757, 2659
BstMAI GTCTC 4 cut(s) 440, 906, 1005, 1261
BstMCI CGRYCG 3 cut(s) 633, 717, 2304
BstMWI GCNNNNNNNGC 9 cut(s) 176, 418, 756, 1337, 1637, 1979, 1993, 2587, 2655
BstNI CCWGG 4 cut(s) 173, 756, 1004, 1499
BstNSI RCATGY 1 cut(s) 355
BstSCI CCNGG 9 cut(s) 135, 171, 355, 754, 978, 1002, 1497, 2273, 2298
BstSFI CTRYAG 1 cut(s) 693
BstSLI GKGCMC 3 cut(s) 236, 1975, 2161
BstV1I GCAGC 6 cut(s) 188, 737, 1628, 2134, 2294, 2665
BstV2I GAAGAC 3 cut(s) 354, 732, 1065
BstX2I RGATCY 1 cut(s) 928
BstYI RGATCY 1 cut(s) 928
BtgZI GCGATG 3 cut(s) 82, 668, 907
BtsCI GGATG 6 cut(s) 148, 1144, 1900, 2181, 2182, 2328
BtsI GCAGTG 1 cut(s) 2499
BtsIMutI CAGTG 6 cut(s) 243, 527, 1385, 2159, 2223, 2499
BtuMI TCGCGA 1 cut(s) 101
CaiI CAGNNNCTG 1 cut(s) 1120
CciI TCATGA 1 cut(s) 2533
Cfr10I RCCGGY 2 cut(s) 628, 1340
CseI GACGC 3 cut(s) 1106, 1682, 2731
Csp6I GTAC 8 cut(s) 690, 877, 1231, 1243, 1383, 1532, 1798, 2515
CspCI CAANNNNNGTGG 2 cut(s) 2606, 2641
CviQI GTAC 8 cut(s) 690, 877, 1231, 1243, 1383, 1532, 1798, 2515
DdeI CTNAG 9 cut(s) 106, 216, 903, 932, 1227, 1476, 1632, 1862, 1989
DraI TTTAAA 2 cut(s) 322, 2040
DrdI GACNNNNNNGTC 1 cut(s) 893
DriI GACNNNNNGTC 1 cut(s) 2727
DseDI GACNNNNNNGTC 1 cut(s) 893
EaeI YGGCCR 3 cut(s) 981, 1638, 1921
Eam1104I CTCTTC 2 cut(s) 402, 462
Eam1105I GACNNNNNGTC 1 cut(s) 2727
EarI CTCTTC 2 cut(s) 402, 462
Ecl136II GAGCTC 1 cut(s) 1627
Eco130I CCWWGG 3 cut(s) 1268, 2138, 2774
Eco147I AGGCCT 1 cut(s) 35
Eco24I GRGCYC 2 cut(s) 1629, 1975
Eco31I GGTCTC 2 cut(s) 440, 1261
Eco32I GATATC 1 cut(s) 701
Eco47I GGWCC 4 cut(s) 1000, 1051, 1564, 2090
Eco47III AGCGCT 3 cut(s) 180, 268, 2657
Eco53kI GAGCTC 1 cut(s) 1627
Eco57I CTGAAG 5 cut(s) 741, 821, 1077, 1190, 2183
EcoICRI GAGCTC 1 cut(s) 1627
EcoNI CCTNNNNNAGG 2 cut(s) 17, 2148
EcoO109I RGGNCCY 3 cut(s) 1051, 1971, 1985
EcoRI GAATTC 2 cut(s) 439, 1373
EcoRII CCWGG 4 cut(s) 171, 754, 1002, 1497
EcoRV GATATC 1 cut(s) 701
EcoT14I CCWWGG 3 cut(s) 1268, 2138, 2774
EcoT22I ATGCAT 1 cut(s) 1087
EcoT38I GRGCYC 2 cut(s) 1629, 1975
ErhI CCWWGG 3 cut(s) 1268, 2138, 2774
FalI AAGNNNNNCTT 2 cut(s) 2752, 2784
FaqI GGGAC 4 cut(s) 602, 1037, 1208, 1466
FauI CCCGC 2 cut(s) 1443, 1975
Fnu4HI GCNGC 8 cut(s) 177, 751, 1617, 1752, 2123, 2283, 2654, 2664
FokI GGATG 6 cut(s) 155, 1131, 1907, 2169, 2188, 2315
FriOI GRGCYC 2 cut(s) 1629, 1975
Fsp4HI GCNGC 8 cut(s) 177, 751, 1617, 1752, 2123, 2283, 2654, 2664
FspBI CTAG 6 cut(s) 275, 282, 1370, 1424, 1757, 2385
FspI TGCGCA 1 cut(s) 956
GluI GCNGC 8 cut(s) 177, 751, 1617, 1752, 2123, 2283, 2654, 2664
GsaI CCCAGC 3 cut(s) 1314, 1340, 2158
GsuI CTGGAG 1 cut(s) 1481
HaeII RGCGCY 4 cut(s) 182, 270, 1757, 2659
HapII CCGG 8 cut(s) 137, 357, 629, 713, 980, 1341, 2274, 2300
HgaI GACGC 3 cut(s) 1106, 1682, 2731
Hin1I GRCGYC 1 cut(s) 2011
HindIII AAGCTT 2 cut(s) 84, 2268
HpaII CCGG 8 cut(s) 137, 357, 629, 713, 980, 1341, 2274, 2300
HphI GGTGA 7 cut(s) 292, 357, 695, 1355, 1880, 2395, 2692
Hpy166II GTNNAC 4 cut(s) 241, 619, 877, 1383
Hpy188I TCNGA 6 cut(s) 133, 445, 548, 825, 906, 1726
Hpy8I GTNNAC 4 cut(s) 241, 619, 877, 1383
Hpy99I CGWCG 6 cut(s) 435, 820, 1698, 1884, 2013, 2222
HpyAV CCTTC 6 cut(s) 46, 214, 688, 1165, 2207, 2754
HpyCH4III ACNGT 4 cut(s) 238, 689, 1255, 2078
HpyCH4IV ACGT 9 cut(s) 607, 615, 818, 888, 1455, 1936, 2011, 2562, 2613
HpyCH4V TGCA 9 cut(s) 484, 695, 1085, 1264, 1616, 1718, 2122, 2504, 2581
HpyF10VI GCNNNNNNNGC 9 cut(s) 176, 418, 756, 1337, 1637, 1979, 1993, 2587, 2655
HpyF3I CTNAG 9 cut(s) 106, 216, 903, 932, 1227, 1476, 1632, 1862, 1989
HpySE526I ACGT 9 cut(s) 607, 615, 818, 888, 1455, 1936, 2011, 2562, 2613
Hsp92I GRCGYC 1 cut(s) 2011
KpnI GGTACC 1 cut(s) 1246
LmnI GCTCC 2 cut(s) 1500, 2254
Lsp1109I GCAGC 6 cut(s) 188, 737, 1628, 2134, 2294, 2665
LweI GCATC 9 cut(s) 105, 640, 1094, 1686, 1932, 1983, 2337, 2527, 2599
MaeI CTAG 6 cut(s) 275, 282, 1370, 1424, 1757, 2385
MaeII ACGT 9 cut(s) 607, 615, 818, 888, 1455, 1936, 2011, 2562, 2613
MaeIII GTNAC 5 cut(s) 363, 1524, 1607, 1868, 2735
MflI RGATCY 1 cut(s) 928
MhlI GDGCHC 4 cut(s) 236, 1629, 1975, 2161
MlsI TGGCCA 1 cut(s) 1640
MluI ACGCGT 1 cut(s) 2723
MluNI TGGCCA 1 cut(s) 1640
MlyI GAGTC 4 cut(s) 579, 777, 960, 2744
MmeI TCCRAC 1 cut(s) 2649
Mox20I TGGCCA 1 cut(s) 1640
Mph1103I ATGCAT 1 cut(s) 1087
MroXI GAANNNNTTC 1 cut(s) 439
MscI TGGCCA 1 cut(s) 1640
MslI CAYNNNNRTG 1 cut(s) 2117
Msp20I TGGCCA 1 cut(s) 1640
MspA1I CMGCKG 1 cut(s) 750
MspI CCGG 8 cut(s) 137, 357, 629, 713, 980, 1341, 2274, 2300
MspR9I CCNGG 9 cut(s) 137, 173, 357, 756, 980, 1004, 1499, 2275, 2300
Mva1269I GAATGC 2 cut(s) 811, 1671
MvaI CCWGG 4 cut(s) 173, 756, 1004, 1499
MwoI GCNNNNNNNGC 9 cut(s) 176, 418, 756, 1337, 1637, 1979, 1993, 2587, 2655
NciI CCSGG 5 cut(s) 137, 357, 980, 2275, 2300
NheI GCTAGC 1 cut(s) 2384
NlaIV GGNNCC 9 cut(s) 426, 540, 1001, 1053, 1244, 1972, 1973, 1986, 2256
NmeAIII GCCGAG 1 cut(s) 2416
NmuCI GTSAC 2 cut(s) 363, 1868
NruI TCGCGA 1 cut(s) 101
NsbI TGCGCA 1 cut(s) 956
NsiI ATGCAT 1 cut(s) 1087
NspI RCATGY 1 cut(s) 355
PagI TCATGA 1 cut(s) 2533
PceI AGGCCT 1 cut(s) 35
PctI GAATGC 2 cut(s) 811, 1671
PdmI GAANNNNTTC 1 cut(s) 439
PfeI GAWTC 8 cut(s) 454, 595, 709, 1472, 1543, 1782, 1834, 2494
Pfl23II CGTACG 1 cut(s) 2514
PflFI GACNNNGTC 1 cut(s) 890
PfoI TCCNGGA 1 cut(s) 1497
PkrI GCNGC 8 cut(s) 178, 752, 1618, 1753, 2124, 2284, 2655, 2665
PleI GAGTC 4 cut(s) 578, 776, 960, 2744
PpsI GAGTC 4 cut(s) 578, 776, 960, 2744
Ppu21I YACGTR 1 cut(s) 608
PpuMI RGGWCCY 1 cut(s) 1051
PshBI ATTAAT 1 cut(s) 1080
PsiI TTATAA 2 cut(s) 500, 1487
Psp124BI GAGCTC 1 cut(s) 1629
Psp1406I AACGTT 1 cut(s) 1936
Psp5II RGGWCCY 1 cut(s) 1051
Psp6I CCWGG 4 cut(s) 171, 754, 1002, 1497
PspFI CCCAGC 3 cut(s) 1310, 1336, 2154
PspGI CCWGG 4 cut(s) 171, 754, 1002, 1497
PspLI CGTACG 1 cut(s) 2514
PspN4I GGNNCC 9 cut(s) 426, 540, 1001, 1053, 1244, 1972, 1973, 1986, 2256
PspOMI GGGCCC 1 cut(s) 1971
PspPPI RGGWCCY 1 cut(s) 1051
PstI CTGCAG 1 cut(s) 697
PstNI CAGNNNCTG 1 cut(s) 1120
PsuI RGATCY 1 cut(s) 928
PsyI GACNNNGTC 1 cut(s) 890
RruI TCGCGA 1 cut(s) 101
RsaI GTAC 8 cut(s) 691, 878, 1232, 1244, 1384, 1533, 1799, 2516
RsaNI GTAC 8 cut(s) 690, 877, 1231, 1243, 1383, 1532, 1798, 2515
RseI CAYNNNNRTG 1 cut(s) 2117
SacI GAGCTC 1 cut(s) 1629
SatI GCNGC 8 cut(s) 177, 751, 1617, 1752, 2123, 2283, 2654, 2664
SchI GAGTC 4 cut(s) 579, 777, 960, 2744
ScrFI CCNGG 9 cut(s) 137, 173, 357, 756, 980, 1004, 1499, 2275, 2300
SduI GDGCHC 4 cut(s) 236, 1629, 1975, 2161
SfaNI GCATC 9 cut(s) 105, 640, 1094, 1686, 1932, 1983, 2337, 2527, 2599
SfcI CTRYAG 1 cut(s) 693
SinI GGWCC 4 cut(s) 1000, 1051, 1564, 2090
SmiMI CAYNNNNRTG 1 cut(s) 2117
SmlI CTYRAG 2 cut(s) 968, 1291
SmoI CTYRAG 2 cut(s) 968, 1291
SseBI AGGCCT 1 cut(s) 35
SspI AATATT 1 cut(s) 160
SspMI CTAG 6 cut(s) 275, 282, 1370, 1424, 1757, 2385
SstI GAGCTC 1 cut(s) 1629
StuI AGGCCT 1 cut(s) 35
StyD4I CCNGG 9 cut(s) 135, 171, 355, 754, 978, 1002, 1497, 2273, 2298
StyI CCWWGG 3 cut(s) 1268, 2138, 2774
TaaI ACNGT 4 cut(s) 238, 689, 1255, 2078
TaiI ACGT 9 cut(s) 610, 618, 821, 891, 1458, 1939, 2014, 2565, 2616
TaqI TCGA 7 cut(s) 44, 430, 474, 1204, 1581, 2247, 2304
TatI WGTACW 2 cut(s) 876, 1382
TauI GCSGC 2 cut(s) 1754, 2666
TfiI GAWTC 8 cut(s) 454, 595, 709, 1472, 1543, 1782, 1834, 2494
TscAI CASTG 6 cut(s) 243, 527, 1385, 2166, 2230, 2506
TseFI GTSAC 2 cut(s) 363, 1868
TseI GCWGC 6 cut(s) 176, 750, 1616, 2122, 2282, 2653
Tsp45I GTSAC 2 cut(s) 363, 1868
TspGWI ACGGA 2 cut(s) 2340, 2506
TspRI CASTG 6 cut(s) 243, 527, 1385, 2166, 2230, 2506
Tth111I GACNNNGTC 1 cut(s) 890
VpaK11BI GGWCC 4 cut(s) 1000, 1051, 1564, 2090
VspI ATTAAT 1 cut(s) 1080
XagI CCTNNNNNAGG 2 cut(s) 17, 2148
XapI RAATTY 4 cut(s) 439, 835, 1373, 1461
XbaI TCTAGA 2 cut(s) 274, 1369
XceI RCATGY 1 cut(s) 355
XcmI CCANNNNNNNNNTGG 2 cut(s) 1558, 2772
XmnI GAANNNNTTC 1 cut(s) 439
XspI CTAG 6 cut(s) 275, 282, 1370, 1424, 1757, 2385
ZraI GACGTC 1 cut(s) 2012
Zsp2I ATGCAT 1 cut(s) 1087
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.