Rroxscaffold_1G00002160

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000160
Physical Location & Seq
Reverse (-)
2576479 .. 2577955
1477 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00002160.1

Sequence Viewer

Length: 1134 bp
ATGACCTTATATTTTTCAGCGTGCAAGCCGCGACATTACATGTTATCCTTCACTACTTGCATCATCGCTCGGACCGATTTGGTCAAATACATGTTGTCCCGCCTATCTTGCGAGGCCGCATTGGCAAATGGGTATTGGCACTTTCGCAGTTTTCACTCCGTATGTGCCCCGAAGGTCGTCAAAGGGCGAGCTATCGCAGATTTTCTAGCACATCATCCGCCGTCGAATTACCCGTGCCGAAAGAGTTGGAGATTGCCCGCAACACCACGACTCGACCGTATAAAGCATGTCGCTCGACTACGAGGTCCGGTATCGTGCCACGCTTCTCTACAGCCCCGGGTGTTATTCTTTGATGGCTCGCGACCGATACTCGGCCGGCGCAGGGATTGTTCTCGGAGAACCCGCCGGAGACCGTTTCTCTTATTCTTTCCACTCACGTTCCAATGTACTAATAATCGGGCCGAGTATGAAGCTCTCATCATTGGACTCGAAGTCTTGTTGGAAATGGGCGTCCCGGACGTTCGCATTCGCGGCGATTCTCGGCTCGTTATTAATCGCCCGGAAAATATATCGCTGTACGAAGGCGATGAACTGCGGAGACGTGGGGAAGAGGGTATAGATTTTCGATGTGTATACGGTCGCGAAGCCAAGAGATTGATGCGCGAGGTGCACACGGGGATATGTGGATCTCATCAAGCTAGCCCTAAGATGCGTTGGCTCCTCCGACGTCACGGTTATTATTGGCCTAGCATTTTGAAGGATTGTATTGCATTCGCCAAAGGCCGCGAGGATTGTCAAGCTCACGGTCTGTCCAAAGATGTTCCTAACATTCCTATGCAACCTATTATTAAACCCCGGCTCGCGCGAGGTCGGGCACTAGACTTGATTGGGATGATCCATCCTCACTCTTCCCTACAGCACAAGTTTATCATCGTCGCCACCGACTATTTCACAAAATGGGTTGAAGCCGAGCCTTTGAAGGAAGCCTCGTGCGCTACCATCCGCCGCCTTATTTTCCGTAATATTTTCCGCGATTTGGTATCCCCGAGGTGCCGGTGTCGGACGGGGGGCAGCGTTCATGGGAGGCCCCGTCGAGGAGCCGGTAACCGATTTTGGCATCCAATTCCTACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

377

Amino Acids

43.58

Weight (kDa)

10.38

Isoelectric Point (pI)

54.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000160)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g11612 FvH4_2g25851 FvH4_3g22802 FvH4_3g22805 FvH4_3g31361 FvH4_3g31382 FvH4_4g05272 FvH4_4g05273 FvH4_4g14567 FvH4_4g15161 FvH4_5g22540 FvH4_6g13113 FvH4_6g31923 FvH4_6g31924 FvH4_6g33651 FvH4_6g45122 FvH4_7g03662
pyrus_communis pycom01g04240 pycom01g24010 pycom02g18210 pycom02g19420 pycom05g06510 pycom09g15750 pycom09g18940 pycom12g02580 pycom12g03100 pycom12g08310 pycom13g22710 pycom13g28060 pycom16g18340 pycom16g18350 pycom16g24880 pycom16g26240 pycom461g00260 pycom520g00980 pycom520g01320
rosa_chinensis RchiOBHm_Chr1g0320731 RchiOBHm_Chr2g0102771 RchiOBHm_Chr3g0462151 RchiOBHm_Chr5g0038141 RchiOBHm_Chr5g0069371 RchiOBHm_Chr7g0239101
rosa_multiflora Rmu_co8038252.1_g000001 Rmu_co8138412.1_g000001 Rmu_co8331087.1_g000001 Rmu_co8479311.1_g000001 Rmu_sc0000112.1_g000018 Rmu_sc0000346.1_g000012 Rmu_sc0002102.1_g000002 Rmu_sc0003505.1_g000013 Rmu_sc0004249.1_g000007 Rmu_sc0004448.1_g000010 Rmu_sc0004594.1_g000011 Rmu_sc0004915.1_g000010 Rmu_sc0008019.1_g000019 Rmu_sc0008303.1_g000001 Rmu_sc0008355.1_g000005 Rmu_sc0009253.1_g000018 Rmu_sc0010211.1_g000002 Rmu_sc0010252.1_g000009 Rmu_sc0011534.1_g000008 Rmu_sc0014811.1_g000009 Rmu_sc0019475.1_g000001 Rmu_sc0024897.1_g000001 Rmu_sc0024898.1_g000001 Rmu_sc0031791.1_g000001 Rmu_sc0038715.1_g000001
rosa_roxburghii Rroxscaffold_165G00436940 Rroxscaffold_174G00435270 Rroxscaffold_177G00434330 Rroxscaffold_177G00434340 Rroxscaffold_177G00434350 Rroxscaffold_1G00002160 Rroxscaffold_1G00025260 Rroxscaffold_1G00042950 Rroxscaffold_1G00068010 Rroxscaffold_2G00107530 Rroxscaffold_3G00221190 Rroxscaffold_3G00221520 Rroxscaffold_3G00223200 Rroxscaffold_4G00322230 Rroxscaffold_4G00331810 Rroxscaffold_5G00385150 Rroxscaffold_5G00387510 Rroxscaffold_6G00410520 Rroxscaffold_6G00423360 Rroxscaffold_6G00423370 Rroxscaffold_6G00429210 Rroxscaffold_7G00158300 Rroxscaffold_7G00163480 Rroxscaffold_7G00171410 Rroxscaffold_7G00178940 Rroxscaffold_7G00199480 Rroxscaffold_7G00205630 Rroxscaffold_7G00207440
rosa_rugosa Rorug01G0056400 Rorug04G0063900 Rorug05G0251400 Rorug07G0221900
rosa_samantha Rh1DG169400 Rh2AG292900 Rh2DG519200 Rh4DG260600 Rh5AG042600 Rh6BG117500
rosa_wichuraiana Rw0G001900 Rw0G005150 Rw0G006380 Rw0G015140 Rw0G016320 Rw0G019440 Rw0G019840 Rw0G023740 Rw1G001590 Rw1G002180 Rw1G003560 Rw1G004280 Rw1G006110 Rw1G006680 Rw1G007920 Rw1G008480 Rw1G009120 Rw1G010310 Rw1G014900 Rw1G019650 Rw1G022070 Rw1G022170 Rw1G041570 Rw2G002740 Rw2G005760 Rw2G032370 Rw2G046770 Rw2G050600 Rw2G051420 Rw3G015930 Rw3G016280 Rw3G019580 Rw3G028420 Rw4G003430 Rw4G005350 Rw4G007530 Rw4G008150 Rw4G009580 Rw4G010250 Rw4G015800 Rw4G017000 Rw4G017910 Rw4G018510 Rw4G019700 Rw4G031010 Rw5G012650 Rw5G020140 Rw5G022060 Rw5G034420 Rw5G035560 Rw5G043010 Rw5G046750 Rw5G047340 Rw5G049500 Rw6G001390 Rw6G002210 Rw6G004530 Rw6G004770 Rw6G005100 Rw6G005890 Rw6G011860 Rw6G014680 Rw6G019480 Rw6G028970 Rw6G033800 Rw7G013050 Rw7G014800 Rw7G025760 Rw7G025850 Rw7G026730 Rw7G026870 Rw7G036330 Rw7G036430 Rw7G039320 Rw7G039510 Rw7G039560 Rw7G041370 Rw7G042050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 303
AatII GACGTC 1 cut(s) 730
AccB1I GGYRCC 1 cut(s) 1050
AccI GTMKAC 1 cut(s) 633
AccII CGCG 9 cut(s) 31, 361, 531, 642, 663, 786, 863, 865, 1032
AclWI GGATC 2 cut(s) 694, 889
AcoI YGGCCR 1 cut(s) 373
AcyI GRCGYC 2 cut(s) 510, 727
AfaI GTAC 2 cut(s) 448, 578
AfiI CCNNNNNNNGG 4 cut(s) 371, 382, 1036, 1094
AflIII ACRYGT 2 cut(s) 39, 90
AgsI TTSAA 3 cut(s) 757, 965, 979
AhdI GACNNNNNGTC 1 cut(s) 491
AjiI CACGTC 1 cut(s) 602
AluBI AGCT 4 cut(s) 191, 473, 698, 800
AluI AGCT 4 cut(s) 191, 473, 698, 800
Alw21I GWGCWC 1 cut(s) 672
Alw26I GTCTC 2 cut(s) 403, 592
Alw44I GTGCAC 1 cut(s) 668
AlwI GGATC 2 cut(s) 694, 889
Ama87I CYCGRG 2 cut(s) 336, 1045
AoxI GGCC 6 cut(s) 114, 373, 459, 743, 781, 1085
ApaLI GTGCAC 1 cut(s) 668
ApeKI GCWGC 1 cut(s) 1071
AseI ATTAAT 1 cut(s) 552
AspLEI GCGC 4 cut(s) 381, 663, 865, 995
AspS9I GGNCC 4 cut(s) 72, 305, 459, 1086
AsuC2I CCSGG 5 cut(s) 337, 338, 515, 560, 856
AsuNHI GCTAGC 1 cut(s) 698
AvaI CYCGRG 2 cut(s) 336, 1045
AvaII GGWCC 2 cut(s) 72, 305
BaeGI GKGCMC 3 cut(s) 169, 672, 877
BanI GGYRCC 1 cut(s) 1050
BauI CACGAG 1 cut(s) 988
Bbv12I GWGCWC 1 cut(s) 672
BbvI GCAGC 1 cut(s) 1083
BccI CCATC 3 cut(s) 347, 906, 1007
BceAI ACGGC 1 cut(s) 205
BcgI CGANNNNNNTGC 2 cut(s) 275, 309
BciVI GTATCC 1 cut(s) 1051
BcnI CCSGG 5 cut(s) 337, 338, 515, 560, 856
BcoDI GTCTC 2 cut(s) 403, 592
BfaI CTAG 4 cut(s) 206, 699, 747, 878
BfmI CTRYAG 2 cut(s) 329, 914
BfuI GTATCC 1 cut(s) 1051
BglI GCCNNNNNGGC 1 cut(s) 122
BisI GCNGC 6 cut(s) 29, 117, 532, 784, 1006, 1072
BlsI GCNGC 6 cut(s) 30, 118, 533, 785, 1007, 1073
Bme1390I CCNGG 5 cut(s) 337, 338, 515, 560, 856
Bme18I GGWCC 2 cut(s) 72, 305
BmeRI GACNNNNNGTC 1 cut(s) 491
BmeT110I CYCGRG 2 cut(s) 336, 1045
BmgBI CACGTC 1 cut(s) 602
BmgT120I GGNCC 4 cut(s) 72, 305, 459, 1086
BmiI GGNNCC 4 cut(s) 719, 1052, 1088, 1099
BmrFI CCNGG 5 cut(s) 337, 338, 515, 560, 856
BmsI GCATC 4 cut(s) 69, 648, 699, 1126
BmtI GCTAGC 1 cut(s) 702
BpuMI CCSGG 5 cut(s) 337, 338, 515, 560, 856
BsaHI GRCGYC 2 cut(s) 510, 727
BsaI GGTCTC 1 cut(s) 403
BsaJI CCNNGG 4 cut(s) 335, 336, 854, 1046
BsaWI WCCGGW 1 cut(s) 307
BsaXI ACNNNNNCTCC 2 cut(s) 1075, 1105
Bsc4I CCNNNNNNNGG 4 cut(s) 371, 382, 1036, 1094
Bse118I RCCGGY 3 cut(s) 375, 1053, 1100
BseDI CCNNGG 4 cut(s) 335, 336, 854, 1046
BseGI GGATG 5 cut(s) 214, 897, 898, 999, 1117
BseLI CCNNNNNNNGG 4 cut(s) 371, 382, 1036, 1094
BseRI GAGGAG 2 cut(s) 710, 1110
BseSI GKGCMC 3 cut(s) 169, 672, 877
BseX3I CGGCCG 1 cut(s) 373
BseXI GCAGC 1 cut(s) 1083
Bsh1236I CGCG 9 cut(s) 31, 361, 531, 642, 663, 786, 863, 865, 1032
Bsh1285I CGRYCG 4 cut(s) 277, 365, 376, 640
BshFI GGCC 6 cut(s) 116, 375, 461, 745, 783, 1087
BshNI GGYRCC 1 cut(s) 1050
BsiEI CGRYCG 4 cut(s) 277, 365, 376, 640
BsiHKAI GWGCWC 1 cut(s) 672
BsiHKCI CYCGRG 2 cut(s) 336, 1045
BsiSI CCGG 9 cut(s) 308, 337, 376, 406, 515, 560, 856, 1054, 1101
BslFI GGGAC 2 cut(s) 82, 497
BslI CCNNNNNNNGG 4 cut(s) 371, 382, 1036, 1094
BsmAI GTCTC 2 cut(s) 403, 592
BsmBI CGTCTC 1 cut(s) 592
BsmFI GGGAC 2 cut(s) 82, 497
BsmI GAATGC 2 cut(s) 525, 770
BsnI GGCC 6 cut(s) 116, 375, 461, 745, 783, 1087
Bso31I GGTCTC 1 cut(s) 403
BsoBI CYCGRG 2 cut(s) 336, 1045
Bsp1286I GDGCHC 3 cut(s) 169, 672, 877
Bsp143I GATC 2 cut(s) 686, 894
Bsp68I TCGCGA 2 cut(s) 361, 642
BspANI GGCC 6 cut(s) 116, 375, 461, 745, 783, 1087
BspFNI CGCG 9 cut(s) 31, 361, 531, 642, 663, 786, 863, 865, 1032
BspLI GGNNCC 4 cut(s) 719, 1052, 1088, 1099
BspOI GCTAGC 1 cut(s) 702
BspPI GGATC 2 cut(s) 694, 889
BspT107I GGYRCC 1 cut(s) 1050
BspTNI GGTCTC 1 cut(s) 403
BsrFI RCCGGY 3 cut(s) 375, 1053, 1100
BssAI RCCGGY 3 cut(s) 375, 1053, 1100
BssECI CCNNGG 4 cut(s) 335, 336, 854, 1046
BssMI GATC 2 cut(s) 686, 894
BssNAI GTATAC 1 cut(s) 634
BssNI GRCGYC 2 cut(s) 510, 727
BssSI CACGAG 1 cut(s) 988
Bst1107I GTATAC 1 cut(s) 634
Bst2BI CACGAG 1 cut(s) 988
Bst4CI ACNGT 5 cut(s) 278, 414, 638, 734, 806
Bst6I CTCTTC 2 cut(s) 603, 913
BstACI GRCGYC 2 cut(s) 510, 727
BstC8I GCNNGC 8 cut(s) 22, 26, 189, 258, 359, 377, 700, 861
BstDEI CTNAG 1 cut(s) 705
BstEII GGTNACC 1 cut(s) 1103
BstF5I GGATG 5 cut(s) 214, 897, 898, 999, 1117
BstFNI CGCG 9 cut(s) 31, 361, 531, 642, 663, 786, 863, 865, 1032
BstHHI GCGC 4 cut(s) 381, 663, 865, 995
BstKTI GATC 2 cut(s) 689, 897
BstMAI GTCTC 2 cut(s) 403, 592
BstMBI GATC 2 cut(s) 686, 894
BstMCI CGRYCG 4 cut(s) 277, 365, 376, 640
BstMWI GCNNNNNNNGC 5 cut(s) 108, 122, 531, 667, 992
BstNSI RCATGY 3 cut(s) 43, 94, 290
BstPI GGTNACC 1 cut(s) 1103
BstSCI CCNGG 5 cut(s) 335, 336, 513, 558, 854
BstSFI CTRYAG 2 cut(s) 329, 914
BstSLI GKGCMC 3 cut(s) 169, 672, 877
BstUI CGCG 9 cut(s) 31, 361, 531, 642, 663, 786, 863, 865, 1032
BstV1I GCAGC 1 cut(s) 1083
BstX2I RGATCY 1 cut(s) 686
BstYI RGATCY 1 cut(s) 686
BstZ17I GTATAC 1 cut(s) 634
BstZI CGGCCG 1 cut(s) 373
BsuI GTATCC 1 cut(s) 1051
BsuRI GGCC 6 cut(s) 116, 375, 461, 745, 783, 1087
BtgZI GCGATG 2 cut(s) 49, 600
BtrI CACGTC 1 cut(s) 602
BtsCI GGATG 5 cut(s) 214, 897, 898, 999, 1117
BtuMI TCGCGA 2 cut(s) 361, 642
Cac8I GCNNGC 8 cut(s) 22, 26, 189, 258, 359, 377, 700, 861
CfoI GCGC 4 cut(s) 381, 663, 865, 995
Cfr10I RCCGGY 3 cut(s) 375, 1053, 1100
Cfr13I GGNCC 4 cut(s) 72, 305, 459, 1086
Cfr9I CCCGGG 1 cut(s) 336
CpoI CGGWCCG 1 cut(s) 72
CseI GACGC 1 cut(s) 499
Csp6I GTAC 2 cut(s) 447, 577
CspI CGGWCCG 1 cut(s) 72
CviAII CATG 4 cut(s) 40, 91, 287, 1079
CviQI GTAC 2 cut(s) 447, 577
DdeI CTNAG 1 cut(s) 705
DpnI GATC 2 cut(s) 688, 896
DpnII GATC 2 cut(s) 686, 894
DrdI GACNNNNNNGTC 1 cut(s) 303
DriI GACNNNNNGTC 1 cut(s) 491
DseDI GACNNNNNNGTC 1 cut(s) 303
EaeI YGGCCR 1 cut(s) 373
EagI CGGCCG 1 cut(s) 373
Eam1104I CTCTTC 2 cut(s) 603, 913
Eam1105I GACNNNNNGTC 1 cut(s) 491
EarI CTCTTC 2 cut(s) 603, 913
EciI GGCGGA 2 cut(s) 207, 992
EclXI CGGCCG 1 cut(s) 373
Eco31I GGTCTC 1 cut(s) 403
Eco47I GGWCC 2 cut(s) 72, 305
Eco52I CGGCCG 1 cut(s) 373
Eco88I CYCGRG 2 cut(s) 336, 1045
Eco91I GGTNACC 1 cut(s) 1103
EcoO109I RGGNCCY 1 cut(s) 1086
EcoO65I GGTNACC 1 cut(s) 1103
Esp3I CGTCTC 1 cut(s) 592
FaeI CATG 4 cut(s) 43, 94, 290, 1082
FaqI GGGAC 2 cut(s) 82, 497
FatI CATG 4 cut(s) 39, 90, 286, 1078
FauI CCCGC 3 cut(s) 107, 265, 410
FblI GTMKAC 1 cut(s) 633
Fnu4HI GCNGC 6 cut(s) 29, 117, 532, 784, 1006, 1072
FokI GGATG 5 cut(s) 201, 885, 904, 986, 1104
Fsp4HI GCNGC 6 cut(s) 29, 117, 532, 784, 1006, 1072
FspBI CTAG 4 cut(s) 206, 699, 747, 878
GlaI GCGC 4 cut(s) 380, 662, 864, 994
GluI GCNGC 6 cut(s) 29, 117, 532, 784, 1006, 1072
HaeIII GGCC 6 cut(s) 116, 375, 461, 745, 783, 1087
HapII CCGG 9 cut(s) 308, 337, 376, 406, 515, 560, 856, 1054, 1101
HgaI GACGC 1 cut(s) 499
HhaI GCGC 4 cut(s) 381, 663, 865, 995
Hin1I GRCGYC 2 cut(s) 510, 727
Hin1II CATG 4 cut(s) 43, 94, 290, 1082
Hin6I GCGC 4 cut(s) 379, 661, 863, 993
HinP1I GCGC 4 cut(s) 379, 661, 863, 993
HinfI GANTC 3 cut(s) 270, 486, 536
HpaII CCGG 9 cut(s) 308, 337, 376, 406, 515, 560, 856, 1054, 1101
Hpy166II GTNNAC 2 cut(s) 634, 670
Hpy188I TCNGA 4 cut(s) 72, 396, 725, 1062
Hpy188III TCNNGA 2 cut(s) 360, 641
Hpy8I GTNNAC 2 cut(s) 634, 670
Hpy99I CGWCG 4 cut(s) 226, 729, 938, 1095
HpyAV CCTTC 5 cut(s) 58, 166, 575, 751, 973
HpyCH4III ACNGT 5 cut(s) 278, 414, 638, 734, 806
HpyCH4IV ACGT 4 cut(s) 437, 519, 601, 727
HpyCH4V TGCA 5 cut(s) 24, 60, 670, 770, 838
HpyF10VI GCNNNNNNNGC 5 cut(s) 108, 122, 531, 667, 992
HpyF3I CTNAG 1 cut(s) 705
HpySE526I ACGT 4 cut(s) 437, 519, 601, 727
Hsp92I GRCGYC 2 cut(s) 510, 727
Hsp92II CATG 4 cut(s) 43, 94, 290, 1082
HspAI GCGC 4 cut(s) 379, 661, 863, 993
KroI GCCGGC 1 cut(s) 375
KroNI GCCGGC 1 cut(s) 377
Kzo9I GATC 2 cut(s) 686, 894
LmnI GCTCC 2 cut(s) 723, 1097
Lsp1109I GCAGC 1 cut(s) 1083
LweI GCATC 4 cut(s) 69, 648, 699, 1126
MaeI CTAG 4 cut(s) 206, 699, 747, 878
MaeII ACGT 4 cut(s) 437, 519, 601, 727
MaeIII GTNAC 2 cut(s) 728, 1103
MalI GATC 2 cut(s) 688, 896
MboI GATC 2 cut(s) 686, 894
MboII GAAGA 2 cut(s) 620, 900
MflI RGATCY 1 cut(s) 686
MhlI GDGCHC 3 cut(s) 169, 672, 877
MluCI AATT 2 cut(s) 226, 1122
MlyI GAGTC 2 cut(s) 264, 480
MmeI TCCRAC 4 cut(s) 227, 480, 748, 1040
MroNI GCCGGC 1 cut(s) 375
MseI TTAA 2 cut(s) 552, 849
MslI CAYNNNNRTG 1 cut(s) 833
MspI CCGG 9 cut(s) 308, 337, 376, 406, 515, 560, 856, 1054, 1101
MspR9I CCNGG 5 cut(s) 337, 338, 515, 560, 856
Mva1269I GAATGC 2 cut(s) 525, 770
MvnI CGCG 9 cut(s) 31, 361, 531, 642, 663, 786, 863, 865, 1032
MwoI GCNNNNNNNGC 5 cut(s) 108, 122, 531, 667, 992
NaeI GCCGGC 1 cut(s) 377
NciI CCSGG 5 cut(s) 337, 338, 515, 560, 856
NdeII GATC 2 cut(s) 686, 894
NgoMIV GCCGGC 1 cut(s) 375
NheI GCTAGC 1 cut(s) 698
NlaIII CATG 4 cut(s) 43, 94, 290, 1082
NlaIV GGNNCC 4 cut(s) 719, 1052, 1088, 1099
NmeAIII GCCGAG 4 cut(s) 351, 487, 520, 994
NmuCI GTSAC 1 cut(s) 728
NruI TCGCGA 2 cut(s) 361, 642
NspI RCATGY 3 cut(s) 43, 94, 290
PciI ACATGT 2 cut(s) 39, 90
PcsI WCGNNNNNNNCGW 4 cut(s) 72, 230, 274, 939
PctI GAATGC 2 cut(s) 525, 770
PdiI GCCGGC 1 cut(s) 377
PfeI GAWTC 1 cut(s) 536
PfoI TCCNGGA 1 cut(s) 513
PkrI GCNGC 6 cut(s) 30, 118, 533, 785, 1007, 1073
PleI GAGTC 2 cut(s) 264, 480
PpsI GAGTC 2 cut(s) 264, 480
PscI ACATGT 2 cut(s) 39, 90
PshBI ATTAAT 1 cut(s) 552
PspEI GGTNACC 1 cut(s) 1103
PspN4I GGNNCC 4 cut(s) 719, 1052, 1088, 1099
PspPI GGNCC 4 cut(s) 72, 305, 459, 1086
PsuI RGATCY 1 cut(s) 686
RruI TCGCGA 2 cut(s) 361, 642
RsaI GTAC 2 cut(s) 448, 578
RsaNI GTAC 2 cut(s) 447, 577
RseI CAYNNNNRTG 1 cut(s) 833
Rsr2I CGGWCCG 1 cut(s) 72
RsrII CGGWCCG 1 cut(s) 72
SaqAI TTAA 2 cut(s) 552, 849
SatI GCNGC 6 cut(s) 29, 117, 532, 784, 1006, 1072
Sau3AI GATC 2 cut(s) 686, 894
Sau96I GGNCC 4 cut(s) 72, 305, 459, 1086
SchI GAGTC 2 cut(s) 264, 480
ScrFI CCNGG 5 cut(s) 337, 338, 515, 560, 856
SduI GDGCHC 3 cut(s) 169, 672, 877
SfaNI GCATC 4 cut(s) 69, 648, 699, 1126
SfcI CTRYAG 2 cut(s) 329, 914
SinI GGWCC 2 cut(s) 72, 305
SmaI CCCGGG 1 cut(s) 338
SmiMI CAYNNNNRTG 1 cut(s) 833
Sse9I AATT 2 cut(s) 226, 1122
SspI AATATT 1 cut(s) 1024
SspMI CTAG 4 cut(s) 206, 699, 747, 878
StyD4I CCNGG 5 cut(s) 335, 336, 513, 558, 854
TaaI ACNGT 5 cut(s) 278, 414, 638, 734, 806
TaiI ACGT 4 cut(s) 440, 522, 604, 730
TaqI TCGA 6 cut(s) 224, 273, 295, 489, 625, 1093
TaqII GACCGA 2 cut(s) 89, 379
TasI AATT 2 cut(s) 226, 1122
TatI WGTACW 1 cut(s) 446
TauI GCSGC 5 cut(s) 31, 119, 534, 786, 1008
TfiI GAWTC 1 cut(s) 536
Tru1I TTAA 2 cut(s) 552, 849
Tru9I TTAA 2 cut(s) 552, 849
TseFI GTSAC 1 cut(s) 728
TseI GCWGC 1 cut(s) 1071
Tsp45I GTSAC 1 cut(s) 728
TspDTI ATGAA 3 cut(s) 483, 603, 1067
TspGWI ACGGA 2 cut(s) 148, 1007
TspMI CCCGGG 1 cut(s) 336
VneI GTGCAC 1 cut(s) 668
VpaK11BI GGWCC 2 cut(s) 72, 305
VspI ATTAAT 1 cut(s) 552
XceI RCATGY 3 cut(s) 43, 94, 290
XmaI CCCGGG 1 cut(s) 336
XmiI GTMKAC 1 cut(s) 633
XspI CTAG 4 cut(s) 206, 699, 747, 878
ZraI GACGTC 1 cut(s) 728
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.