Rw1G014900

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000160
Physical Location & Seq
Reverse (-)
33203436 .. 33204867
1432 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G014900.1

Sequence Viewer

Length: 1161 bp
ATGCAGCTACACAAGCTCAAGATGAATCCCGCCAAGTGCGTTTTTGGAGTTCAGGCAGGAGATTTCCTGGGATTCATTGTCCATCAAAGAGGCATTGAGGTCCCTGAGGATAAAGCAAACGCGTTGCAAGGACAGAATGAGTTTGTGTGGGAACCTAAACATCAAGAGGCTTTCGACAAAATAAAGGCCTATCTGGCGAGCCCGCCAGTGCTTGTTCCTCCTAGAGCGGGATTTCCATTAAAGTTGTATGTTTCAGCAGCTGAGGCTTCCATTGGCAGCCTCCTCGCTCAGGATGATGCAAATGGTGTTGAACATGCCATCTTTTACCTCAGTAGGACACTCACAGATTGCGAAACAAGGTACACTCCAATGGAAAAGCTGTGTCTTACATTATACTTCTCAGCATGCAAGTTGCGGCATTACATGTTGTCCTTTACTACTTGCATCATTGCTCAAACCGATCTAAAAGCAGTAAAGGGGCAAGCCATAGCAGACTTTCTGGCACATCACCCTATGCTAGATGTCCCCGCGGTTAGAGATTTAGAGGTCGCTGCCACAACTTTAGATCGCCCGGATTTAGCGTGCTTGCCAGAGTACGCCATGCTTTATCAAGACACAATCTCACTCCAGCCTTGGGTGTTATATTTTGACGGGTCAAGAACAGATACGCTAGCAGGAGCAGGGGTTGTCTTGGAAAACCCGGCCGGCGATCGATTTTCCTACTCTTTCCAGTTGGAGTTCCAGTGTACCAATAACCAAGCAGAATATGAGGCCCTCATTATAGGCCTAGAAGTACTACTGGAAATGGGAATCGGAGATGTACAAATACTTGGCGACTCTCTCTTGGTTATCAATCAGGCATTAGACCTGTTGGACCAGTTTGATAACATACATCTAGAGTACATTCCTCGCGAGCGAAATTTTGCAGCGAACGAGTTGGCCCAACTAGCAACAGGGGTAACATTGAGATATGGTGTGCGGGAGAGAATCCTTAAAGTCGAGCGTCGCACGCTTCCTTCATGGATGGCGAGAAGAGATCCTCCAGATGATACCTTAGTCGCGACCCTGGAACCCATTGACGTGGATTGGCGCATCCCTTTGATCGCTTATCTCAAGCAGCCAGATCCCATGCCGACAGGAAGATTCGTTTTCTTGCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

386

Amino Acids

43.36

Weight (kDa)

5.0

Isoelectric Point (pI)

34.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RT_RNaseH_2 PF17919 50 - 144 1.5e-21 RNase H-like domain found in reverse transcriptase
RT_RNaseH PF17917 79 - 159 3.8e-13 RNase H-like domain found in reverse transcriptase
RVT_3 PF13456 216 - 286 2e-08 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000160)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g11612 FvH4_2g25851 FvH4_3g22802 FvH4_3g22805 FvH4_3g31361 FvH4_3g31382 FvH4_4g05272 FvH4_4g05273 FvH4_4g14567 FvH4_4g15161 FvH4_5g22540 FvH4_6g13113 FvH4_6g31923 FvH4_6g31924 FvH4_6g33651 FvH4_6g45122 FvH4_7g03662
pyrus_communis pycom01g04240 pycom01g24010 pycom02g18210 pycom02g19420 pycom05g06510 pycom09g15750 pycom09g18940 pycom12g02580 pycom12g03100 pycom12g08310 pycom13g22710 pycom13g28060 pycom16g18340 pycom16g18350 pycom16g24880 pycom16g26240 pycom461g00260 pycom520g00980 pycom520g01320
rosa_chinensis RchiOBHm_Chr1g0320731 RchiOBHm_Chr2g0102771 RchiOBHm_Chr3g0462151 RchiOBHm_Chr5g0038141 RchiOBHm_Chr5g0069371 RchiOBHm_Chr7g0239101
rosa_multiflora Rmu_co8038252.1_g000001 Rmu_co8138412.1_g000001 Rmu_co8331087.1_g000001 Rmu_co8479311.1_g000001 Rmu_sc0000112.1_g000018 Rmu_sc0000346.1_g000012 Rmu_sc0002102.1_g000002 Rmu_sc0003505.1_g000013 Rmu_sc0004249.1_g000007 Rmu_sc0004448.1_g000010 Rmu_sc0004594.1_g000011 Rmu_sc0004915.1_g000010 Rmu_sc0008019.1_g000019 Rmu_sc0008303.1_g000001 Rmu_sc0008355.1_g000005 Rmu_sc0009253.1_g000018 Rmu_sc0010211.1_g000002 Rmu_sc0010252.1_g000009 Rmu_sc0011534.1_g000008 Rmu_sc0014811.1_g000009 Rmu_sc0019475.1_g000001 Rmu_sc0024897.1_g000001 Rmu_sc0024898.1_g000001 Rmu_sc0031791.1_g000001 Rmu_sc0038715.1_g000001
rosa_roxburghii Rroxscaffold_165G00436940 Rroxscaffold_174G00435270 Rroxscaffold_177G00434330 Rroxscaffold_177G00434340 Rroxscaffold_177G00434350 Rroxscaffold_1G00002160 Rroxscaffold_1G00025260 Rroxscaffold_1G00042950 Rroxscaffold_1G00068010 Rroxscaffold_2G00107530 Rroxscaffold_3G00221190 Rroxscaffold_3G00221520 Rroxscaffold_3G00223200 Rroxscaffold_4G00322230 Rroxscaffold_4G00331810 Rroxscaffold_5G00385150 Rroxscaffold_5G00387510 Rroxscaffold_6G00410520 Rroxscaffold_6G00423360 Rroxscaffold_6G00423370 Rroxscaffold_6G00429210 Rroxscaffold_7G00158300 Rroxscaffold_7G00163480 Rroxscaffold_7G00171410 Rroxscaffold_7G00178940 Rroxscaffold_7G00199480 Rroxscaffold_7G00205630 Rroxscaffold_7G00207440
rosa_rugosa Rorug01G0056400 Rorug04G0063900 Rorug05G0251400 Rorug07G0221900
rosa_samantha Rh1DG169400 Rh2AG292900 Rh2DG519200 Rh4DG260600 Rh5AG042600 Rh6BG117500
rosa_wichuraiana Rw0G001900 Rw0G005150 Rw0G006380 Rw0G015140 Rw0G016320 Rw0G019440 Rw0G019840 Rw0G023740 Rw1G001590 Rw1G002180 Rw1G003560 Rw1G004280 Rw1G006110 Rw1G006680 Rw1G007920 Rw1G008480 Rw1G009120 Rw1G010310 Rw1G014900 Rw1G019650 Rw1G022070 Rw1G022170 Rw1G041570 Rw2G002740 Rw2G005760 Rw2G032370 Rw2G046770 Rw2G050600 Rw2G051420 Rw3G015930 Rw3G016280 Rw3G019580 Rw3G028420 Rw4G003430 Rw4G005350 Rw4G007530 Rw4G008150 Rw4G009580 Rw4G010250 Rw4G015800 Rw4G017000 Rw4G017910 Rw4G018510 Rw4G019700 Rw4G031010 Rw5G012650 Rw5G020140 Rw5G022060 Rw5G034420 Rw5G035560 Rw5G043010 Rw5G046750 Rw5G047340 Rw5G049500 Rw6G001390 Rw6G002210 Rw6G004530 Rw6G004770 Rw6G005100 Rw6G005890 Rw6G011860 Rw6G014680 Rw6G019480 Rw6G028970 Rw6G033800 Rw7G013050 Rw7G014800 Rw7G025760 Rw7G025850 Rw7G026730 Rw7G026870 Rw7G036330 Rw7G036430 Rw7G039320 Rw7G039510 Rw7G039560 Rw7G041370 Rw7G042050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 227
AccII CGCG 4 cut(s) 122, 530, 912, 1061
AciI CCGC 7 cut(s) 30, 203, 227, 415, 528, 530, 979
AclWI GGATC 2 cut(s) 1031, 1118
AcoI YGGCCR 1 cut(s) 702
AcsI RAATTY 1 cut(s) 919
AfaI GTAC 6 cut(s) 362, 596, 748, 795, 822, 902
AfiI CCNNNNNNNGG 3 cut(s) 227, 289, 634
AflIII ACRYGT 2 cut(s) 120, 423
AgsI TTSAA 1 cut(s) 311
AjiI CACGTC 1 cut(s) 1081
AjnI CCWGG 2 cut(s) 66, 1065
AluBI AGCT 4 cut(s) 7, 16, 260, 379
AluI AGCT 4 cut(s) 7, 16, 260, 379
AlwI GGATC 2 cut(s) 1031, 1118
AlwNI CAGNNNCTG 1 cut(s) 260
AoxI GGCC 5 cut(s) 186, 702, 771, 784, 939
ApeKI GCWGC 6 cut(s) 4, 257, 276, 551, 926, 1117
ApoI RAATTY 1 cut(s) 919
AspLEI GCGC 1 cut(s) 1092
AspS9I GGNCC 4 cut(s) 100, 772, 874, 940
AsuC2I CCSGG 2 cut(s) 572, 701
AsuHPI GGTGA 1 cut(s) 500
AsuNHI GCTAGC 1 cut(s) 670
AvaII GGWCC 2 cut(s) 100, 874
AxyI CCTNAGG 1 cut(s) 105
BaeI ACNNNNGTAYC 2 cut(s) 1041, 1074
BanII GRGCYC 1 cut(s) 203
BbvCI CCTCAGC 1 cut(s) 261
BbvI GCAGC 6 cut(s) 16, 269, 288, 538, 938, 1129
BccI CCATC 3 cut(s) 90, 326, 1018
BcgI CGANNNNNNTGC 2 cut(s) 265, 299
BciT130I CCWGG 2 cut(s) 68, 1067
BcnI CCSGG 2 cut(s) 572, 701
BfaI CTAG 6 cut(s) 222, 518, 671, 788, 896, 947
BglI GCCNNNNNGGC 1 cut(s) 194
BisI GCNGC 7 cut(s) 5, 258, 277, 416, 552, 927, 1118
BlsI GCNGC 7 cut(s) 6, 259, 278, 417, 553, 928, 1119
BmcAI AGTACT 1 cut(s) 795
Bme1390I CCNGG 4 cut(s) 68, 572, 701, 1067
Bme18I GGWCC 2 cut(s) 100, 874
BmgBI CACGTC 1 cut(s) 1081
BmgT120I GGNCC 4 cut(s) 100, 772, 874, 940
BmiI GGNNCC 3 cut(s) 102, 153, 1071
BmrFI CCNGG 4 cut(s) 68, 572, 701, 1067
BmsI GCATC 3 cut(s) 286, 453, 1101
BmtI GCTAGC 1 cut(s) 674
BpmI CTGGAG 2 cut(s) 611, 1026
Bpu10I CCTNAGC 2 cut(s) 261, 288
BpuEI CTTGAG 1 cut(s) 1097
BpuMI CCSGG 2 cut(s) 572, 701
Bsa29I ATCGAT 1 cut(s) 712
BsaJI CCNNGG 4 cut(s) 67, 528, 632, 1065
BsaXI ACNNNNNCTCC 4 cut(s) 669, 699, 728, 758
Bsc4I CCNNNNNNNGG 3 cut(s) 227, 289, 634
Bse118I RCCGGY 1 cut(s) 704
Bse1I ACTGG 5 cut(s) 206, 730, 742, 804, 877
Bse21I CCTNAGG 1 cut(s) 105
Bse3DI GCAATG 1 cut(s) 447
BseBI CCWGG 2 cut(s) 68, 1067
BseCI ATCGAT 1 cut(s) 712
BseDI CCNNGG 4 cut(s) 67, 528, 632, 1065
BseGI GGATG 3 cut(s) 298, 1029, 1092
BseLI CCNNNNNNNGG 3 cut(s) 227, 289, 634
BseMI GCAATG 1 cut(s) 447
BseMII CTCAG 5 cut(s) 96, 252, 302, 343, 414
BseNI ACTGG 5 cut(s) 206, 730, 742, 804, 877
BseRI GAGGAG 1 cut(s) 272
BseX3I CGGCCG 1 cut(s) 702
BseXI GCAGC 6 cut(s) 16, 269, 288, 538, 938, 1129
Bsh1236I CGCG 4 cut(s) 122, 530, 912, 1061
Bsh1285I CGRYCG 2 cut(s) 705, 712
BshFI GGCC 5 cut(s) 188, 704, 773, 786, 941
BshVI ATCGAT 1 cut(s) 712
BsiEI CGRYCG 2 cut(s) 705, 712
BsiSI CCGG 3 cut(s) 572, 701, 705
BslFI GGGAC 2 cut(s) 86, 509
BslI CCNNNNNNNGG 3 cut(s) 227, 289, 634
BsmFI GGGAC 2 cut(s) 86, 509
BsnI GGCC 5 cut(s) 188, 704, 773, 786, 941
Bsp1286I GDGCHC 1 cut(s) 203
Bsp1407I TGTACA 1 cut(s) 820
Bsp143I GATC 6 cut(s) 460, 565, 709, 1036, 1101, 1123
Bsp68I TCGCGA 2 cut(s) 912, 1061
BspACI CCGC 7 cut(s) 30, 203, 227, 415, 528, 530, 979
BspANI GGCC 5 cut(s) 188, 704, 773, 786, 941
BspCNI CTCAG 5 cut(s) 97, 253, 301, 342, 413
BspDI ATCGAT 1 cut(s) 712
BspFNI CGCG 4 cut(s) 122, 530, 912, 1061
BspLI GGNNCC 3 cut(s) 102, 153, 1071
BspOI GCTAGC 1 cut(s) 674
BspPI GGATC 2 cut(s) 1031, 1118
BsrBI CCGCTC 1 cut(s) 227
BsrDI GCAATG 1 cut(s) 447
BsrFI RCCGGY 1 cut(s) 704
BsrGI TGTACA 1 cut(s) 820
BsrI ACTGG 5 cut(s) 206, 730, 742, 804, 877
BssAI RCCGGY 1 cut(s) 704
BssECI CCNNGG 4 cut(s) 67, 528, 632, 1065
BssMI GATC 6 cut(s) 460, 565, 709, 1036, 1101, 1123
BssT1I CCWWGG 1 cut(s) 632
Bst2UI CCWGG 2 cut(s) 68, 1067
Bst6I CTCTTC 1 cut(s) 1027
BstAUI TGTACA 1 cut(s) 820
BstDEI CTNAG 6 cut(s) 105, 261, 288, 329, 400, 1054
BstDSI CCRYGG 1 cut(s) 528
BstENI CCTNNNNNAGG 1 cut(s) 287
BstF5I GGATG 3 cut(s) 298, 1029, 1092
BstFNI CGCG 4 cut(s) 122, 530, 912, 1061
BstHHI GCGC 1 cut(s) 1092
BstKTI GATC 6 cut(s) 463, 568, 712, 1039, 1104, 1126
BstMBI GATC 6 cut(s) 460, 565, 709, 1036, 1101, 1123
BstMCI CGRYCG 2 cut(s) 705, 712
BstMWI GCNNNNNNNGC 5 cut(s) 13, 194, 263, 947, 1009
BstNI CCWGG 2 cut(s) 68, 1067
BstNSI RCATGY 3 cut(s) 317, 408, 427
BstSCI CCNGG 4 cut(s) 66, 570, 699, 1065
BstUI CGCG 4 cut(s) 122, 530, 912, 1061
BstV1I GCAGC 6 cut(s) 16, 269, 288, 538, 938, 1129
BstX2I RGATCY 2 cut(s) 1036, 1123
BstXI CCANNNNNNTGG 1 cut(s) 1081
BstYI RGATCY 2 cut(s) 1036, 1123
BstZI CGGCCG 1 cut(s) 702
Bsu15I ATCGAT 1 cut(s) 712
Bsu36I CCTNAGG 1 cut(s) 105
BsuRI GGCC 5 cut(s) 188, 704, 773, 786, 941
BsuTUI ATCGAT 1 cut(s) 712
BtgI CCRYGG 1 cut(s) 528
BtrI CACGTC 1 cut(s) 1081
BtsCI GGATG 3 cut(s) 298, 1029, 1092
BtsIMutI CAGTG 2 cut(s) 213, 749
BtuMI TCGCGA 2 cut(s) 912, 1061
CaiI CAGNNNCTG 1 cut(s) 260
CfoI GCGC 1 cut(s) 1092
Cfr10I RCCGGY 1 cut(s) 704
Cfr13I GGNCC 4 cut(s) 100, 772, 874, 940
Cfr42I CCGCGG 1 cut(s) 531
ClaI ATCGAT 1 cut(s) 712
CseI GACGC 1 cut(s) 992
Csp6I GTAC 6 cut(s) 361, 595, 747, 794, 821, 901
CviAII CATG 6 cut(s) 314, 405, 424, 601, 1020, 1129
CviQI GTAC 6 cut(s) 361, 595, 747, 794, 821, 901
DdeI CTNAG 6 cut(s) 105, 261, 288, 329, 400, 1054
DpnI GATC 6 cut(s) 462, 567, 711, 1038, 1103, 1125
DpnII GATC 6 cut(s) 460, 565, 709, 1036, 1101, 1123
EaeI YGGCCR 1 cut(s) 702
EagI CGGCCG 1 cut(s) 702
Eam1104I CTCTTC 1 cut(s) 1027
EarI CTCTTC 1 cut(s) 1027
EclXI CGGCCG 1 cut(s) 702
Eco130I CCWWGG 1 cut(s) 632
Eco147I AGGCCT 2 cut(s) 188, 786
Eco24I GRGCYC 1 cut(s) 203
Eco47I GGWCC 2 cut(s) 100, 874
Eco52I CGGCCG 1 cut(s) 702
Eco81I CCTNAGG 1 cut(s) 105
EcoNI CCTNNNNNAGG 1 cut(s) 287
EcoO109I RGGNCCY 2 cut(s) 100, 772
EcoRII CCWGG 2 cut(s) 66, 1065
EcoT14I CCWWGG 1 cut(s) 632
EcoT38I GRGCYC 1 cut(s) 203
ErhI CCWWGG 1 cut(s) 632
FaeI CATG 6 cut(s) 317, 408, 427, 604, 1023, 1132
FaqI GGGAC 2 cut(s) 86, 509
FatI CATG 6 cut(s) 313, 404, 423, 600, 1019, 1128
FauI CCCGC 5 cut(s) 37, 210, 220, 535, 972
Fnu4HI GCNGC 7 cut(s) 5, 258, 277, 416, 552, 927, 1118
FokI GGATG 3 cut(s) 305, 1036, 1079
FriOI GRGCYC 1 cut(s) 203
Fsp4HI GCNGC 7 cut(s) 5, 258, 277, 416, 552, 927, 1118
FspBI CTAG 6 cut(s) 222, 518, 671, 788, 896, 947
GlaI GCGC 1 cut(s) 1091
GluI GCNGC 7 cut(s) 5, 258, 277, 416, 552, 927, 1118
GsuI CTGGAG 2 cut(s) 611, 1026
HaeIII GGCC 5 cut(s) 188, 704, 773, 786, 941
HapII CCGG 3 cut(s) 572, 701, 705
HgaI GACGC 1 cut(s) 992
HhaI GCGC 1 cut(s) 1092
Hin1II CATG 6 cut(s) 317, 408, 427, 604, 1023, 1132
Hin6I GCGC 1 cut(s) 1090
HinP1I GCGC 1 cut(s) 1090
HinfI GANTC 6 cut(s) 25, 72, 810, 836, 987, 1143
HpaII CCGG 3 cut(s) 572, 701, 705
HphI GGTGA 1 cut(s) 500
Hpy166II GTNNAC 2 cut(s) 363, 747
Hpy188I TCNGA 1 cut(s) 815
Hpy188III TCNNGA 9 cut(s) 19, 164, 290, 611, 657, 896, 911, 1043, 1060
Hpy8I GTNNAC 2 cut(s) 363, 747
Hpy99I CGWCG 1 cut(s) 1008
HpyAV CCTTC 1 cut(s) 1026
HpyCH4IV ACGT 1 cut(s) 1080
HpyCH4V TGCA 7 cut(s) 4, 127, 299, 408, 444, 926, 1156
HpyF10VI GCNNNNNNNGC 5 cut(s) 13, 194, 263, 947, 1009
HpyF3I CTNAG 6 cut(s) 105, 261, 288, 329, 400, 1054
HpySE526I ACGT 1 cut(s) 1080
Hsp92II CATG 6 cut(s) 317, 408, 427, 604, 1023, 1132
HspAI GCGC 1 cut(s) 1090
KroI GCCGGC 1 cut(s) 704
KroNI GCCGGC 1 cut(s) 706
KspI CCGCGG 1 cut(s) 531
Kzo9I GATC 6 cut(s) 460, 565, 709, 1036, 1101, 1123
LmnI GCTCC 1 cut(s) 677
Lsp1109I GCAGC 6 cut(s) 16, 269, 288, 538, 938, 1129
LweI GCATC 3 cut(s) 286, 453, 1101
MaeI CTAG 6 cut(s) 222, 518, 671, 788, 896, 947
MaeII ACGT 1 cut(s) 1080
MaeIII GTNAC 1 cut(s) 958
MalI GATC 6 cut(s) 462, 567, 711, 1038, 1103, 1125
MbiI CCGCTC 1 cut(s) 227
MboI GATC 6 cut(s) 460, 565, 709, 1036, 1101, 1123
MboII GAAGA 2 cut(s) 1044, 1152
MflI RGATCY 2 cut(s) 1036, 1123
MhlI GDGCHC 1 cut(s) 203
MluCI AATT 1 cut(s) 919
MluI ACGCGT 1 cut(s) 120
MlyI GAGTC 1 cut(s) 830
MmeI TCCRAC 2 cut(s) 714, 852
MroNI GCCGGC 1 cut(s) 704
MseI TTAA 2 cut(s) 239, 993
MslI CAYNNNNRTG 2 cut(s) 368, 1079
MspA1I CMGCKG 2 cut(s) 260, 530
MspI CCGG 3 cut(s) 572, 701, 705
MspR9I CCNGG 4 cut(s) 68, 572, 701, 1067
MvaI CCWGG 2 cut(s) 68, 1067
MvnI CGCG 4 cut(s) 122, 530, 912, 1061
MwoI GCNNNNNNNGC 5 cut(s) 13, 194, 263, 947, 1009
NaeI GCCGGC 1 cut(s) 706
NciI CCSGG 2 cut(s) 572, 701
NdeII GATC 6 cut(s) 460, 565, 709, 1036, 1101, 1123
NgoMIV GCCGGC 1 cut(s) 704
NheI GCTAGC 1 cut(s) 670
NlaIII CATG 6 cut(s) 317, 408, 427, 604, 1023, 1132
NlaIV GGNNCC 3 cut(s) 102, 153, 1071
NruI TCGCGA 2 cut(s) 912, 1061
NspI RCATGY 3 cut(s) 317, 408, 427
PaeI GCATGC 1 cut(s) 408
PceI AGGCCT 2 cut(s) 188, 786
PciI ACATGT 1 cut(s) 423
PdiI GCCGGC 1 cut(s) 706
PfeI GAWTC 5 cut(s) 25, 72, 810, 987, 1143
PkrI GCNGC 7 cut(s) 6, 259, 278, 417, 553, 928, 1119
Ple19I CGATCG 1 cut(s) 712
PleI GAGTC 1 cut(s) 830
PpsI GAGTC 1 cut(s) 830
PpuMI RGGWCCY 1 cut(s) 100
PscI ACATGT 1 cut(s) 423
Psp5II RGGWCCY 1 cut(s) 100
Psp6I CCWGG 2 cut(s) 66, 1065
PspGI CCWGG 2 cut(s) 66, 1065
PspN4I GGNNCC 3 cut(s) 102, 153, 1071
PspPI GGNCC 4 cut(s) 100, 772, 874, 940
PspPPI RGGWCCY 1 cut(s) 100
PstNI CAGNNNCTG 1 cut(s) 260
PsuI RGATCY 2 cut(s) 1036, 1123
PvuI CGATCG 1 cut(s) 712
PvuII CAGCTG 1 cut(s) 260
RruI TCGCGA 2 cut(s) 912, 1061
RsaI GTAC 6 cut(s) 362, 596, 748, 795, 822, 902
RsaNI GTAC 6 cut(s) 361, 595, 747, 794, 821, 901
RseI CAYNNNNRTG 2 cut(s) 368, 1079
SacII CCGCGG 1 cut(s) 531
SaqAI TTAA 2 cut(s) 239, 993
SatI GCNGC 7 cut(s) 5, 258, 277, 416, 552, 927, 1118
Sau3AI GATC 6 cut(s) 460, 565, 709, 1036, 1101, 1123
Sau96I GGNCC 4 cut(s) 100, 772, 874, 940
ScaI AGTACT 1 cut(s) 795
SchI GAGTC 1 cut(s) 830
ScrFI CCNGG 4 cut(s) 68, 572, 701, 1067
SduI GDGCHC 1 cut(s) 203
SfaNI GCATC 3 cut(s) 286, 453, 1101
Sfr303I CCGCGG 1 cut(s) 531
SgrBI CCGCGG 1 cut(s) 531
SinI GGWCC 2 cut(s) 100, 874
SmiMI CAYNNNNRTG 2 cut(s) 368, 1079
SmlI CTYRAG 2 cut(s) 17, 1112
SmoI CTYRAG 2 cut(s) 17, 1112
SphI GCATGC 1 cut(s) 408
Sse9I AATT 1 cut(s) 919
SseBI AGGCCT 2 cut(s) 188, 786
SsiI CCGC 7 cut(s) 30, 203, 227, 415, 528, 530, 979
SspMI CTAG 6 cut(s) 222, 518, 671, 788, 896, 947
StuI AGGCCT 2 cut(s) 188, 786
StyD4I CCNGG 4 cut(s) 66, 570, 699, 1065
StyI CCWWGG 1 cut(s) 632
TaiI ACGT 1 cut(s) 1083
TaqI TCGA 3 cut(s) 174, 712, 999
TasI AATT 1 cut(s) 919
TatI WGTACW 3 cut(s) 793, 820, 900
TauI GCSGC 1 cut(s) 418
TfiI GAWTC 5 cut(s) 25, 72, 810, 987, 1143
Tru1I TTAA 2 cut(s) 239, 993
Tru9I TTAA 2 cut(s) 239, 993
TscAI CASTG 2 cut(s) 213, 749
TseI GCWGC 6 cut(s) 4, 257, 276, 551, 926, 1117
TspDTI ATGAA 3 cut(s) 38, 64, 1008
TspRI CASTG 2 cut(s) 213, 749
VpaK11BI GGWCC 2 cut(s) 100, 874
XagI CCTNNNNNAGG 1 cut(s) 287
XapI RAATTY 1 cut(s) 919
XbaI TCTAGA 1 cut(s) 895
XceI RCATGY 3 cut(s) 317, 408, 427
XspI CTAG 6 cut(s) 222, 518, 671, 788, 896, 947
ZrmI AGTACT 1 cut(s) 795
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.