Rw6G005100

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000160
Physical Location & Seq
Forward (+)
8322011 .. 8324995
2985 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G005100.1

Sequence Viewer

Length: 2253 bp
ATGGTGGAAAAAGAGGCTTATGATCACATCGCAACCTTAGAGGTCGTTAATGAAGAACTTTCGGACCCGGAGGATGAAGATGAAGTCAATATTCAACTCGCCCCGGCGGCGCTGGACGACACACCTCCCAAAGTTAAAGACCCTACTGAGAAGGTTAATCTGGGCACAGTAGACGAACCTATGGAGGTATCTATCAGCGCTTATCTAGAGCCTAGCGAGAAACAAAGGCTCACTGACTTATTATTAGAGTTTAAAGACTGCTTCGCAGAGAAATATCAAGACATGCCTGGCCTATCACCAGATTTGGTTTGTCATCAACTACCAACTCTTCCTGACAAGAGGCCCGTCAAGCAGGAACCTCGACGAATGAATTCGGAGACCCAGATTCTTGTAAAGGAAGAGGTAGAGAAAATGCACAAGTCAGGAATTATAAGGGTCGCCAAGTATAATCAGTGGCTATCTAATATAGTGCCTGTCCGAAAAAAGAATGGCAAGATGAGAGTCTGCGTGGATTATAGAGACTTGAATCTCGCTACACCTAAAGACGTTTACCCCATGCTGGTCGCGGATATGTTGGTAGATGCGGATATCACCAGATTCCGGTCGCTGAAGAAGACAGACACAAGACCGCTTTCCGCTGCCCCGGTTTCACAGGAGTTTTCGAATATGTGGTCATGCTCGTGCAAGTTGCGACACTACATGCTATCTTTTACCACTTGCATCATCGCTCAGACCGATTTGGTCAAATACATGTTGTCCCGGCCTATCTTGAGAGGCCGCATTGGCAAATGGGTATTGGCGCTTTCAGAGTTTTCGCTCCAATATGTACCCCAGAAAGCTGTCAAAGGGCAGGCCATCGCAGACTTTCTCGCACATCATCCTACGTTAGAAATACCTGCACCGAAGGAGTTAGAGATTGCCTGCACCACTACGACTCGACCAGATCAAGCGTGCATCCCTGAGTACGCGGTTTGGTATCAAGCTACAATCTATCTACAGCCCTGGGTATTATTCTTTGATGGCTCAAGAACGGACACTCTTGTTGGCGCGGGGATTGTTTTGGAAAACCCAGCTGGTGACCGCTTCTCTTATTCTTTCCAGCTAACATTCCAATGTACTAATAATCAGGCTGAGTATGAAGCTCTTATCATTGGACTCGAAGTCTTACTGGAAATGGGCGTACGGGACGTTCAGATTCGCGGCGATTCTCAGCTTGTTATTAACCAGCTCCAGGAAAAATATCGCTGTGCGAGTTGGTTGCTCGTACCATACCTGAATCGCGCCATCGAGCTTCTGGATCAATTTACTGATGTTGATATGGAATACATACCACGCGAGCGTAACTTTGCAGCTAACGAGCTCGCTCAGTTGGCTACAGGTATCACATTGAAGTATGGCGTGCGCGAGCGCATTTTGAAAGTTGAGCGTCGCACACTACCTTCGTGGCTTGCTCGACCTGATCCACCAGAAGAGCCCGTAGTCGCGGTACTAGAACCTATTGATGTTGATTGGCGGATTCCGCTGATTGAGTACCTCAAACAACCAGACCCCAGAGCTGACAGGAGGATTCGTTTCCTCGCATTGAATTACTTCCTTCCAGGCGATGAATTGCGATGTCGTGGGGAGGATGGTGTAGATTTTCGATGTGTCTATGGTCGCGAAGCTAAGAGATTGATGCGCGAGGTGCACACGGGGATATGTGGATCCCATCAAGCTGGACCTAAGATGCGCTGGCTTCTGCGACGTCATGGTTATTATTGGCCCAGCATTTTGAAGGATTGTATCGCATTTTCCAAAGATTGTGAGGACTGTCAAGCACACGGTCCAGTCCAGCATATTCCTAACATTCCTATGCAGCCTATTATTAAGCCTTGGCCTGCGCGAGGCTGGGCATTGGACTTGATTGGGATGATCCATCCTCATTCTTCCCTGCAGCACAAGTTTATCATCGTCGCCACTGACTACTTCACTAAATGGGTTGAAGCAGAGCCTTTGAAGGAGGCCTCCGGTGCTACCATTCGCCAGTTTATTTTCCGTAATATTCTCTGCAGGTTTGGTATCCCTGAGGTGCTGGTTTCGGACAGGGGGGCAGCATTCATGGGAGGCCCCGTCGAGGAGCTGGTCAATGATTTTGGCATTCAATTCATACATAGTACTCCGTACTATGCTCAATCTAATGGTCAGGCGGAGGCTAGCAACAAGGCAATCATCACCTTACTCAAGAAGATGTTGGTAGAGAACCCTCGACAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

750

Amino Acids

85.72

Weight (kDa)

5.81

Isoelectric Point (pI)

43.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_3 PF13456 339 - 457 2.9e-19 Reverse transcriptase-like
Integrase_H2C2 PF17921 554 - 607 1.3e-07 Integrase zinc binding domain
rve PF00665 628 - 722 7.2e-08 Integrase core domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000160)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g11612 FvH4_2g25851 FvH4_3g22802 FvH4_3g22805 FvH4_3g31361 FvH4_3g31382 FvH4_4g05272 FvH4_4g05273 FvH4_4g14567 FvH4_4g15161 FvH4_5g22540 FvH4_6g13113 FvH4_6g31923 FvH4_6g31924 FvH4_6g33651 FvH4_6g45122 FvH4_7g03662
pyrus_communis pycom01g04240 pycom01g24010 pycom02g18210 pycom02g19420 pycom05g06510 pycom09g15750 pycom09g18940 pycom12g02580 pycom12g03100 pycom12g08310 pycom13g22710 pycom13g28060 pycom16g18340 pycom16g18350 pycom16g24880 pycom16g26240 pycom461g00260 pycom520g00980 pycom520g01320
rosa_chinensis RchiOBHm_Chr1g0320731 RchiOBHm_Chr2g0102771 RchiOBHm_Chr3g0462151 RchiOBHm_Chr5g0038141 RchiOBHm_Chr5g0069371 RchiOBHm_Chr7g0239101
rosa_multiflora Rmu_co8038252.1_g000001 Rmu_co8138412.1_g000001 Rmu_co8331087.1_g000001 Rmu_co8479311.1_g000001 Rmu_sc0000112.1_g000018 Rmu_sc0000346.1_g000012 Rmu_sc0002102.1_g000002 Rmu_sc0003505.1_g000013 Rmu_sc0004249.1_g000007 Rmu_sc0004448.1_g000010 Rmu_sc0004594.1_g000011 Rmu_sc0004915.1_g000010 Rmu_sc0008019.1_g000019 Rmu_sc0008303.1_g000001 Rmu_sc0008355.1_g000005 Rmu_sc0009253.1_g000018 Rmu_sc0010211.1_g000002 Rmu_sc0010252.1_g000009 Rmu_sc0011534.1_g000008 Rmu_sc0014811.1_g000009 Rmu_sc0019475.1_g000001 Rmu_sc0024897.1_g000001 Rmu_sc0024898.1_g000001 Rmu_sc0031791.1_g000001 Rmu_sc0038715.1_g000001
rosa_roxburghii Rroxscaffold_165G00436940 Rroxscaffold_174G00435270 Rroxscaffold_177G00434330 Rroxscaffold_177G00434340 Rroxscaffold_177G00434350 Rroxscaffold_1G00002160 Rroxscaffold_1G00025260 Rroxscaffold_1G00042950 Rroxscaffold_1G00068010 Rroxscaffold_2G00107530 Rroxscaffold_3G00221190 Rroxscaffold_3G00221520 Rroxscaffold_3G00223200 Rroxscaffold_4G00322230 Rroxscaffold_4G00331810 Rroxscaffold_5G00385150 Rroxscaffold_5G00387510 Rroxscaffold_6G00410520 Rroxscaffold_6G00423360 Rroxscaffold_6G00423370 Rroxscaffold_6G00429210 Rroxscaffold_7G00158300 Rroxscaffold_7G00163480 Rroxscaffold_7G00171410 Rroxscaffold_7G00178940 Rroxscaffold_7G00199480 Rroxscaffold_7G00205630 Rroxscaffold_7G00207440
rosa_rugosa Rorug01G0056400 Rorug04G0063900 Rorug05G0251400 Rorug07G0221900
rosa_samantha Rh1DG169400 Rh2AG292900 Rh2DG519200 Rh4DG260600 Rh5AG042600 Rh6BG117500
rosa_wichuraiana Rw0G001900 Rw0G005150 Rw0G006380 Rw0G015140 Rw0G016320 Rw0G019440 Rw0G019840 Rw0G023740 Rw1G001590 Rw1G002180 Rw1G003560 Rw1G004280 Rw1G006110 Rw1G006680 Rw1G007920 Rw1G008480 Rw1G009120 Rw1G010310 Rw1G014900 Rw1G019650 Rw1G022070 Rw1G022170 Rw1G041570 Rw2G002740 Rw2G005760 Rw2G032370 Rw2G046770 Rw2G050600 Rw2G051420 Rw3G015930 Rw3G016280 Rw3G019580 Rw3G028420 Rw4G003430 Rw4G005350 Rw4G007530 Rw4G008150 Rw4G009580 Rw4G010250 Rw4G015800 Rw4G017000 Rw4G017910 Rw4G018510 Rw4G019700 Rw4G031010 Rw5G012650 Rw5G020140 Rw5G022060 Rw5G034420 Rw5G035560 Rw5G043010 Rw5G046750 Rw5G047340 Rw5G049500 Rw6G001390 Rw6G002210 Rw6G004530 Rw6G004770 Rw6G005100 Rw6G005890 Rw6G011860 Rw6G014680 Rw6G019480 Rw6G028970 Rw6G033800 Rw7G013050 Rw7G014800 Rw7G025760 Rw7G025850 Rw7G026730 Rw7G026870 Rw7G036330 Rw7G036430 Rw7G039320 Rw7G039510 Rw7G039560 Rw7G041370 Rw7G042050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 431
AatII GACGTC 1 cut(s) 1747
Acc36I ACCTGC 2 cut(s) 904, 2040
AccI GTMKAC 1 cut(s) 171
AclWI GGATC 5 cut(s) 1305, 1454, 1698, 1711, 1906
AcsI RAATTY 1 cut(s) 370
AcuI CTGAAG 1 cut(s) 629
AcyI GRCGYC 1 cut(s) 1744
AfaI GTAC 9 cut(s) 828, 965, 1117, 1182, 1266, 1488, 1532, 2155, 2162
AfeI AGCGCT 1 cut(s) 199
AfiI CCNNNNNNNGG 5 cut(s) 559, 600, 1231, 1883, 2113
AflIII ACRYGT 1 cut(s) 750
AgsI TTSAA 9 cut(s) 95, 526, 1390, 1417, 1585, 1774, 1982, 1996, 2141
AhdI GACNNNNNGTC 1 cut(s) 1160
AjnI CCWGG 4 cut(s) 286, 1001, 1230, 1597
Alw21I GWGCWC 2 cut(s) 1362, 1689
Alw26I GTCTC 2 cut(s) 371, 513
Alw44I GTGCAC 1 cut(s) 1685
AlwI GGATC 5 cut(s) 1305, 1454, 1698, 1711, 1906
Aor51HI AGCGCT 1 cut(s) 199
AoxI GGCC 9 cut(s) 289, 341, 761, 775, 852, 1760, 1874, 2001, 2104
ApaLI GTGCAC 1 cut(s) 1685
ApeKI GCWGC 5 cut(s) 638, 1349, 1855, 1933, 2090
ApoI RAATTY 1 cut(s) 370
ArsI GACNNNNNNTTYG 2 cut(s) 656, 688
Asp700I GAANNNNTTC 2 cut(s) 370, 1589
AspS9I GGNCC 6 cut(s) 64, 342, 1718, 1761, 1823, 2105
AsuC2I CCSGG 4 cut(s) 68, 104, 644, 760
AsuHPI GGTGA 4 cut(s) 288, 583, 1088, 2203
AsuII TTCGAA 1 cut(s) 662
AsuNHI GCTAGC 1 cut(s) 2192
AvaII GGWCC 3 cut(s) 64, 1718, 1823
AxyI CCTNAGG 1 cut(s) 2064
BaeGI GKGCMC 2 cut(s) 167, 1689
BamHI GGATCC 1 cut(s) 1703
BanII GRGCYC 2 cut(s) 1362, 1476
BauI CACGAG 1 cut(s) 679
BbsI GAAGAC 1 cut(s) 620
Bbv12I GWGCWC 2 cut(s) 1362, 1689
BbvI GCAGC 5 cut(s) 625, 1361, 1867, 1945, 2102
BccI CCATC 6 cut(s) 863, 1013, 1292, 1622, 1716, 1923
BcgI CGANNNNNNTGC 4 cut(s) 341, 375, 1240, 1274
BciT130I CCWGG 4 cut(s) 288, 1003, 1232, 1599
BciVI GTATCC 1 cut(s) 2069
BclI TGATCA 1 cut(s) 22
BcnI CCSGG 4 cut(s) 68, 104, 644, 760
BcoDI GTCTC 2 cut(s) 371, 513
BfaI CTAG 4 cut(s) 206, 213, 1490, 2193
BfmI CTRYAG 4 cut(s) 995, 1374, 1931, 2047
BfoI RGCGCY 3 cut(s) 113, 201, 803
BfuAI ACCTGC 2 cut(s) 904, 2040
BfuI GTATCC 1 cut(s) 2069
BglI GCCNNNNNGGC 2 cut(s) 107, 783
BisI GCNGC 8 cut(s) 108, 639, 778, 1201, 1350, 1856, 1934, 2091
BlsI GCNGC 8 cut(s) 109, 640, 779, 1202, 1351, 1857, 1935, 2092
BmcAI AGTACT 1 cut(s) 2155
Bme1390I CCNGG 8 cut(s) 68, 104, 288, 644, 760, 1003, 1232, 1599
Bme18I GGWCC 3 cut(s) 64, 1718, 1823
BmeRI GACNNNNNGTC 1 cut(s) 1160
BmgT120I GGNCC 6 cut(s) 64, 342, 1718, 1761, 1823, 2105
BmiI GGNNCC 4 cut(s) 66, 357, 1705, 2107
BmrFI CCNGG 8 cut(s) 68, 104, 288, 644, 760, 1003, 1232, 1599
BmsI GCATC 5 cut(s) 571, 729, 963, 1665, 1716
BmtI GCTAGC 1 cut(s) 2196
BpiI GAAGAC 1 cut(s) 620
BpmI CTGGAG 1 cut(s) 1214
Bpu14I TTCGAA 1 cut(s) 662
BpuEI CTTGAG 3 cut(s) 790, 1009, 2204
BpuMI CCSGG 4 cut(s) 68, 104, 644, 760
BsaHI GRCGYC 1 cut(s) 1744
BsaI GGTCTC 1 cut(s) 371
BsaJI CCNNGG 5 cut(s) 102, 642, 1001, 1002, 1871
BsaWI WCCGGW 2 cut(s) 600, 2006
BsaXI ACNNNNNCTCC 4 cut(s) 1555, 1585, 2094, 2124
Bsc4I CCNNNNNNNGG 5 cut(s) 559, 600, 1231, 1883, 2113
Bse1I ACTGG 3 cut(s) 1173, 1826, 2023
Bse21I CCTNAGG 1 cut(s) 2064
BseBI CCWGG 4 cut(s) 288, 1003, 1232, 1599
BseDI CCNNGG 5 cut(s) 102, 642, 1001, 1002, 1871
BseGI GGATG 6 cut(s) 79, 877, 954, 1633, 1914, 1915
BseLI CCNNNNNNNGG 5 cut(s) 559, 600, 1231, 1883, 2113
BseMII CTCAG 7 cut(s) 138, 743, 951, 1122, 1223, 1379, 2055
BseNI ACTGG 3 cut(s) 1173, 1826, 2023
BseRI GAGGAG 1 cut(s) 2129
BseSI GKGCMC 2 cut(s) 167, 1689
BseXI GCAGC 5 cut(s) 625, 1361, 1867, 1945, 2102
BseYI CCCAGC 3 cut(s) 1069, 1763, 1887
BsgI GTGCAG 2 cut(s) 882, 907
Bsh1285I CGRYCG 1 cut(s) 605
BshFI GGCC 9 cut(s) 291, 343, 763, 777, 854, 1762, 1876, 2003, 2106
BsiEI CGRYCG 1 cut(s) 605
BsiHKAI GWGCWC 2 cut(s) 1362, 1689
BsiSI CCGG 6 cut(s) 68, 104, 601, 644, 760, 2007
BsiWI CGTACG 1 cut(s) 1180
BslFI GGGAC 2 cut(s) 742, 1199
BslI CCNNNNNNNGG 5 cut(s) 559, 600, 1231, 1883, 2113
BsmAI GTCTC 2 cut(s) 371, 513
BsmFI GGGAC 2 cut(s) 742, 1199
BsmI GAATGC 2 cut(s) 2093, 2136
BsnI GGCC 9 cut(s) 291, 343, 763, 777, 854, 1762, 1876, 2003, 2106
Bso31I GGTCTC 1 cut(s) 371
Bsp119I TTCGAA 1 cut(s) 662
Bsp1286I GDGCHC 4 cut(s) 167, 1362, 1476, 1689
Bsp143I GATC 6 cut(s) 22, 943, 1297, 1459, 1703, 1911
Bsp68I TCGCGA 1 cut(s) 1659
BspANI GGCC 9 cut(s) 291, 343, 763, 777, 854, 1762, 1876, 2003, 2106
BspCNI CTCAG 7 cut(s) 139, 742, 952, 1123, 1222, 1378, 2056
BspLI GGNNCC 4 cut(s) 66, 357, 1705, 2107
BspMAI CTGCAG 2 cut(s) 1935, 2051
BspMI ACCTGC 2 cut(s) 904, 2040
BspOI GCTAGC 1 cut(s) 2196
BspPI GGATC 5 cut(s) 1305, 1454, 1698, 1711, 1906
BspQI GCTCTTC 1 cut(s) 1464
BspT104I TTCGAA 1 cut(s) 662
BspTNI GGTCTC 1 cut(s) 371
BsrI ACTGG 3 cut(s) 1173, 1826, 2023
BssECI CCNNGG 5 cut(s) 102, 642, 1001, 1002, 1871
BssMI GATC 6 cut(s) 22, 943, 1297, 1459, 1703, 1911
BssNI GRCGYC 1 cut(s) 1744
BssSI CACGAG 1 cut(s) 679
BssT1I CCWWGG 1 cut(s) 1871
Bst2BI CACGAG 1 cut(s) 679
Bst2UI CCWGG 4 cut(s) 288, 1003, 1232, 1599
Bst4CI ACNGT 3 cut(s) 169, 1811, 1823
Bst6I CTCTTC 3 cut(s) 333, 393, 1464
BstACI GRCGYC 1 cut(s) 1744
BstBI TTCGAA 1 cut(s) 662
BstEII GGTNACC 1 cut(s) 1076
BstENI CCTNNNNNAGG 1 cut(s) 1881
BstF5I GGATG 6 cut(s) 79, 877, 954, 1633, 1914, 1915
BstH2I RGCGCY 3 cut(s) 113, 201, 803
BstKTI GATC 6 cut(s) 25, 946, 1300, 1462, 1706, 1914
BstMAI GTCTC 2 cut(s) 371, 513
BstMBI GATC 6 cut(s) 22, 943, 1297, 1459, 1703, 1911
BstMCI CGRYCG 1 cut(s) 605
BstMWI GCNNNNNNNGC 7 cut(s) 107, 349, 783, 1370, 1519, 1684, 2009
BstNI CCWGG 4 cut(s) 288, 1003, 1232, 1599
BstNSI RCATGY 3 cut(s) 286, 703, 754
BstPI GGTNACC 1 cut(s) 1076
BstSCI CCNGG 8 cut(s) 66, 102, 286, 642, 758, 1001, 1230, 1597
BstSFI CTRYAG 4 cut(s) 995, 1374, 1931, 2047
BstSLI GKGCMC 2 cut(s) 167, 1689
BstV1I GCAGC 5 cut(s) 625, 1361, 1867, 1945, 2102
BstV2I GAAGAC 1 cut(s) 620
BstX2I RGATCY 1 cut(s) 1703
BstXI CCANNNNNNTGG 1 cut(s) 1715
BstYI RGATCY 1 cut(s) 1703
Bsu36I CCTNAGG 1 cut(s) 2064
BsuI GTATCC 1 cut(s) 2069
BsuRI GGCC 9 cut(s) 291, 343, 763, 777, 854, 1762, 1876, 2003, 2106
BtgZI GCGATG 5 cut(s) 13, 709, 841, 1617, 1627
BtsCI GGATG 6 cut(s) 79, 877, 954, 1633, 1914, 1915
BtsIMutI CAGTG 3 cut(s) 231, 458, 1956
BtuMI TCGCGA 1 cut(s) 1659
BveI ACCTGC 2 cut(s) 904, 2040
Cfr13I GGNCC 6 cut(s) 64, 342, 1718, 1761, 1823, 2105
CseI GACGC 1 cut(s) 1415
Csp6I GTAC 9 cut(s) 827, 964, 1116, 1181, 1265, 1487, 1531, 2154, 2161
CviAII CATG 7 cut(s) 283, 556, 675, 700, 751, 1748, 2098
CviQI GTAC 9 cut(s) 827, 964, 1116, 1181, 1265, 1487, 1531, 2154, 2161
DpnI GATC 6 cut(s) 24, 945, 1299, 1461, 1705, 1913
DpnII GATC 6 cut(s) 22, 943, 1297, 1459, 1703, 1911
DraI TTTAAA 1 cut(s) 253
DriI GACNNNNNGTC 1 cut(s) 1160
Eam1104I CTCTTC 3 cut(s) 333, 393, 1464
Eam1105I GACNNNNNGTC 1 cut(s) 1160
EarI CTCTTC 3 cut(s) 333, 393, 1464
EciI GGCGGA 2 cut(s) 1528, 2201
Ecl136II GAGCTC 1 cut(s) 1360
Eco130I CCWWGG 1 cut(s) 1871
Eco147I AGGCCT 1 cut(s) 2003
Eco24I GRGCYC 2 cut(s) 1362, 1476
Eco31I GGTCTC 1 cut(s) 371
Eco32I GATATC 1 cut(s) 589
Eco47I GGWCC 3 cut(s) 64, 1718, 1823
Eco47III AGCGCT 1 cut(s) 199
Eco53kI GAGCTC 1 cut(s) 1360
Eco57I CTGAAG 1 cut(s) 629
Eco81I CCTNAGG 1 cut(s) 2064
Eco91I GGTNACC 1 cut(s) 1076
EcoICRI GAGCTC 1 cut(s) 1360
EcoNI CCTNNNNNAGG 1 cut(s) 1881
EcoO109I RGGNCCY 1 cut(s) 2105
EcoO65I GGTNACC 1 cut(s) 1076
EcoRI GAATTC 1 cut(s) 370
EcoRII CCWGG 4 cut(s) 286, 1001, 1230, 1597
EcoRV GATATC 1 cut(s) 589
EcoT14I CCWWGG 1 cut(s) 1871
EcoT38I GRGCYC 2 cut(s) 1362, 1476
ErhI CCWWGG 1 cut(s) 1871
FaeI CATG 7 cut(s) 286, 559, 678, 703, 754, 1751, 2101
FaqI GGGAC 2 cut(s) 742, 1199
FatI CATG 7 cut(s) 282, 555, 674, 699, 750, 1747, 2097
FauI CCCGC 1 cut(s) 1042
FbaI TGATCA 1 cut(s) 22
FblI GTMKAC 1 cut(s) 171
Fnu4HI GCNGC 8 cut(s) 108, 639, 778, 1201, 1350, 1856, 1934, 2091
FokI GGATG 6 cut(s) 86, 864, 941, 1640, 1902, 1921
FriOI GRGCYC 2 cut(s) 1362, 1476
Fsp4HI GCNGC 8 cut(s) 108, 639, 778, 1201, 1350, 1856, 1934, 2091
FspBI CTAG 4 cut(s) 206, 213, 1490, 2193
GluI GCNGC 8 cut(s) 108, 639, 778, 1201, 1350, 1856, 1934, 2091
GsaI CCCAGC 3 cut(s) 1073, 1767, 1891
GsuI CTGGAG 1 cut(s) 1214
HaeII RGCGCY 3 cut(s) 113, 201, 803
HaeIII GGCC 9 cut(s) 291, 343, 763, 777, 854, 1762, 1876, 2003, 2106
HapII CCGG 6 cut(s) 68, 104, 601, 644, 760, 2007
HgaI GACGC 1 cut(s) 1415
Hin1I GRCGYC 1 cut(s) 1744
Hin1II CATG 7 cut(s) 286, 559, 678, 703, 754, 1751, 2101
HpaII CCGG 6 cut(s) 68, 104, 601, 644, 760, 2007
HphI GGTGA 4 cut(s) 288, 583, 1088, 2203
Hpy166II GTNNAC 3 cut(s) 172, 550, 1687
Hpy188I TCNGA 7 cut(s) 64, 376, 479, 732, 808, 1194, 2080
Hpy188III TCNNGA 9 cut(s) 206, 278, 332, 423, 769, 1026, 1295, 1658, 2221
Hpy8I GTNNAC 3 cut(s) 172, 550, 1687
Hpy99I CGWCG 5 cut(s) 366, 1431, 1746, 1955, 2114
HpyAV CCTTC 6 cut(s) 145, 898, 1449, 1604, 1768, 1990
HpyCH4III ACNGT 3 cut(s) 169, 1811, 1823
HpyCH4IV ACGT 4 cut(s) 546, 884, 1188, 1744
HpyF10VI GCNNNNNNNGC 7 cut(s) 107, 349, 783, 1370, 1519, 1684, 2009
HpySE526I ACGT 4 cut(s) 546, 884, 1188, 1744
Hsp92I GRCGYC 1 cut(s) 1744
Hsp92II CATG 7 cut(s) 286, 559, 678, 703, 754, 1751, 2101
Ksp22I TGATCA 1 cut(s) 22
Kzo9I GATC 6 cut(s) 22, 943, 1297, 1459, 1703, 1911
LguI GCTCTTC 1 cut(s) 1464
LmnI GCTCC 3 cut(s) 822, 1233, 2116
Lsp1109I GCAGC 5 cut(s) 625, 1361, 1867, 1945, 2102
LweI GCATC 5 cut(s) 571, 729, 963, 1665, 1716
MaeI CTAG 4 cut(s) 206, 213, 1490, 2193
MaeII ACGT 4 cut(s) 546, 884, 1188, 1744
MaeIII GTNAC 2 cut(s) 1076, 1340
MalI GATC 6 cut(s) 24, 945, 1299, 1461, 1705, 1913
MboI GATC 6 cut(s) 22, 943, 1297, 1459, 1703, 1911
MboII GAAGA 9 cut(s) 65, 89, 320, 410, 622, 625, 1481, 1917, 2236
MflI RGATCY 1 cut(s) 1703
MhlI GDGCHC 4 cut(s) 167, 1362, 1476, 1689
MluCI AATT 6 cut(s) 370, 426, 1301, 1585, 1607, 2141
MlyI GAGTC 3 cut(s) 510, 928, 1149
MroXI GAANNNNTTC 2 cut(s) 370, 1589
MseI TTAA 6 cut(s) 48, 135, 156, 252, 1221, 1866
MslI CAYNNNNRTG 3 cut(s) 679, 1111, 1850
MspA1I CMGCKG 3 cut(s) 638, 1073, 1522
MspI CCGG 6 cut(s) 68, 104, 601, 644, 760, 2007
MspR9I CCNGG 8 cut(s) 68, 104, 288, 644, 760, 1003, 1232, 1599
Mva1269I GAATGC 2 cut(s) 2093, 2136
MvaI CCWGG 4 cut(s) 288, 1003, 1232, 1599
MwoI GCNNNNNNNGC 7 cut(s) 107, 349, 783, 1370, 1519, 1684, 2009
NciI CCSGG 4 cut(s) 68, 104, 644, 760
NdeII GATC 6 cut(s) 22, 943, 1297, 1459, 1703, 1911
NheI GCTAGC 1 cut(s) 2192
NlaIII CATG 7 cut(s) 286, 559, 678, 703, 754, 1751, 2101
NlaIV GGNNCC 4 cut(s) 66, 357, 1705, 2107
NmuCI GTSAC 1 cut(s) 1076
NruI TCGCGA 1 cut(s) 1659
NspI RCATGY 3 cut(s) 286, 703, 754
NspV TTCGAA 1 cut(s) 662
PasI CCCWGGG 1 cut(s) 1002
PceI AGGCCT 1 cut(s) 2003
PciI ACATGT 1 cut(s) 750
PciSI GCTCTTC 1 cut(s) 1464
PcsI WCGNNNNNNNCGW 1 cut(s) 732
PctI GAATGC 2 cut(s) 2093, 2136
PdmI GAANNNNTTC 2 cut(s) 370, 1589
PfeI GAWTC 8 cut(s) 385, 526, 597, 1195, 1205, 1276, 1516, 1567
Pfl23II CGTACG 1 cut(s) 1180
PfoI TCCNGGA 1 cut(s) 1230
PkrI GCNGC 8 cut(s) 109, 640, 779, 1202, 1351, 1857, 1935, 2092
PleI GAGTC 3 cut(s) 509, 928, 1149
PpsI GAGTC 3 cut(s) 509, 928, 1149
PscI ACATGT 1 cut(s) 750
PsiI TTATAA 1 cut(s) 431
Psp124BI GAGCTC 1 cut(s) 1362
Psp6I CCWGG 4 cut(s) 286, 1001, 1230, 1597
PspEI GGTNACC 1 cut(s) 1076
PspFI CCCAGC 3 cut(s) 1069, 1763, 1887
PspGI CCWGG 4 cut(s) 286, 1001, 1230, 1597
PspLI CGTACG 1 cut(s) 1180
PspN4I GGNNCC 4 cut(s) 66, 357, 1705, 2107
PspPI GGNCC 6 cut(s) 64, 342, 1718, 1761, 1823, 2105
PsrI GAACNNNNNNTAC 2 cut(s) 1173, 1205
PstI CTGCAG 2 cut(s) 1935, 2051
PsuI RGATCY 1 cut(s) 1703
PvuII CAGCTG 1 cut(s) 1073
RruI TCGCGA 1 cut(s) 1659
RsaI GTAC 9 cut(s) 828, 965, 1117, 1182, 1266, 1488, 1532, 2155, 2162
RsaNI GTAC 9 cut(s) 827, 964, 1116, 1181, 1265, 1487, 1531, 2154, 2161
RseI CAYNNNNRTG 3 cut(s) 679, 1111, 1850
SacI GAGCTC 1 cut(s) 1362
SapI GCTCTTC 1 cut(s) 1464
SaqAI TTAA 6 cut(s) 48, 135, 156, 252, 1221, 1866
SatI GCNGC 8 cut(s) 108, 639, 778, 1201, 1350, 1856, 1934, 2091
Sau3AI GATC 6 cut(s) 22, 943, 1297, 1459, 1703, 1911
Sau96I GGNCC 6 cut(s) 64, 342, 1718, 1761, 1823, 2105
ScaI AGTACT 1 cut(s) 2155
SchI GAGTC 3 cut(s) 510, 928, 1149
ScrFI CCNGG 8 cut(s) 68, 104, 288, 644, 760, 1003, 1232, 1599
SduI GDGCHC 4 cut(s) 167, 1362, 1476, 1689
SfaNI GCATC 5 cut(s) 571, 729, 963, 1665, 1716
SfcI CTRYAG 4 cut(s) 995, 1374, 1931, 2047
SfuI TTCGAA 1 cut(s) 662
SinI GGWCC 3 cut(s) 64, 1718, 1823
SmiMI CAYNNNNRTG 3 cut(s) 679, 1111, 1850
SmlI CTYRAG 3 cut(s) 769, 1024, 2219
SmoI CTYRAG 3 cut(s) 769, 1024, 2219
Sse9I AATT 6 cut(s) 370, 426, 1301, 1585, 1607, 2141
SseBI AGGCCT 1 cut(s) 2003
SspI AATATT 2 cut(s) 91, 2041
SspMI CTAG 4 cut(s) 206, 213, 1490, 2193
SstI GAGCTC 1 cut(s) 1362
StuI AGGCCT 1 cut(s) 2003
StyD4I CCNGG 8 cut(s) 66, 102, 286, 642, 758, 1001, 1230, 1597
StyI CCWWGG 1 cut(s) 1871
TaaI ACNGT 3 cut(s) 169, 1811, 1823
TaiI ACGT 4 cut(s) 549, 887, 1191, 1747
TaqI TCGA 9 cut(s) 361, 662, 937, 1158, 1287, 1453, 1642, 2112, 2245
TaqII GACCGA 1 cut(s) 749
TasI AATT 6 cut(s) 370, 426, 1301, 1585, 1607, 2141
TatI WGTACW 2 cut(s) 1115, 2153
TauI GCSGC 3 cut(s) 110, 780, 1203
TfiI GAWTC 8 cut(s) 385, 526, 597, 1195, 1205, 1276, 1516, 1567
Tru1I TTAA 6 cut(s) 48, 135, 156, 252, 1221, 1866
Tru9I TTAA 6 cut(s) 48, 135, 156, 252, 1221, 1866
TscAI CASTG 3 cut(s) 238, 458, 1963
TseFI GTSAC 1 cut(s) 1076
TseI GCWGC 5 cut(s) 638, 1349, 1855, 1933, 2090
Tsp45I GTSAC 1 cut(s) 1076
TspDTI ATGAA 8 cut(s) 66, 90, 96, 383, 1152, 1620, 2086, 2134
TspGWI ACGGA 3 cut(s) 1046, 2024, 2148
TspRI CASTG 3 cut(s) 238, 458, 1963
VneI GTGCAC 1 cut(s) 1685
VpaK11BI GGWCC 3 cut(s) 64, 1718, 1823
XagI CCTNNNNNAGG 1 cut(s) 1881
XapI RAATTY 1 cut(s) 370
XbaI TCTAGA 1 cut(s) 205
XceI RCATGY 3 cut(s) 286, 703, 754
XcmI CCANNNNNNNNNTGG 1 cut(s) 1291
XmiI GTMKAC 1 cut(s) 171
XmnI GAANNNNTTC 2 cut(s) 370, 1589
XspI CTAG 4 cut(s) 206, 213, 1490, 2193
ZraI GACGTC 1 cut(s) 1745
ZrmI AGTACT 1 cut(s) 2155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.