Uncharacterized protein K02A2.6-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_1 | PF00078 | 911 - 1070 | 2.1e-32 | Reverse transcriptase (RNA-dependent DNA polymerase) |
| RT_RNaseH_2 | PF17919 | 1134 - 1232 | 2.2e-24 | RNase H-like domain found in reverse transcriptase |
| RT_RNaseH | PF17917 | 1162 - 1263 | 5.8e-25 | RNase H-like domain found in reverse transcriptase |
| RVT_3 | PF13456 | 1314 - 1433 | 3.4e-20 | Reverse transcriptase-like |
| Integrase_H2C2 | PF17921 | 1533 - 1587 | 7e-07 | Integrase zinc binding domain |
| rve | PF00665 | 1607 - 1704 | 2.9e-12 | Integrase core domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2889 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 161 |
| AatII | GACGTC | 2 cut(s) | 779, 3390 |
| Acc16I | TGCGCA | 1 cut(s) | 180 |
| Acc36I | ACCTGC | 4 cut(s) | 3897, 4108, 4625, 5014 |
| Acc65I | GGTACC | 1 cut(s) | 3216 |
| AccB1I | GGYRCC | 7 cut(s) | 469, 2855, 2905, 3216, 3469, 4850, 5453 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1526, 2158 |
| AccBSI | CCGCTC | 5 cut(s) | 353, 1150, 2357, 2812, 3656 |
| AccI | GTMKAC | 3 cut(s) | 2952, 3063, 5277 |
| AccII | CGCG | 2 cut(s) | 138, 2097 |
| AccIII | TCCGGA | 4 cut(s) | 359, 3135, 3749, 4974 |
| AclI | AACGTT | 2 cut(s) | 735, 4050 |
| AcoI | YGGCCR | 2 cut(s) | 309, 4703 |
| AcsI | RAATTY | 6 cut(s) | 84, 213, 488, 1481, 1820, 3280 |
| AcuI | CTGAAG | 7 cut(s) | 881, 1556, 2676, 3010, 4944, 4958, 5307 |
| AcvI | CACGTG | 1 cut(s) | 2054 |
| AcyI | GRCGYC | 3 cut(s) | 776, 2465, 3387 |
| AdeI | CACNNNGTG | 1 cut(s) | 3859 |
| AfeI | AGCGCT | 1 cut(s) | 2114 |
| AflII | CTTAAG | 1 cut(s) | 388 |
| AflIII | ACRYGT | 5 cut(s) | 136, 954, 1951, 2053, 3801 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 5411, 5579 |
| AleI | CACNNNNGTG | 1 cut(s) | 2231 |
| Alw21I | GWGCWC | 7 cut(s) | 418, 2458, 2637, 2925, 3099, 4651, 5261 |
| Alw44I | GTGCAC | 1 cut(s) | 5257 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 674, 1877, 4901 |
| Ama87I | CYCGRG | 2 cut(s) | 626, 4737 |
| Aor13HI | TCCGGA | 4 cut(s) | 359, 3135, 3749, 4974 |
| Aor51HI | AGCGCT | 1 cut(s) | 2114 |
| ApaI | GGGCCC | 1 cut(s) | 575 |
| ApaLI | GTGCAC | 1 cut(s) | 5257 |
| ApeKI | GCWGC | 6 cut(s) | 104, 1516, 3848, 3931, 4673, 4895 |
| ApoI | RAATTY | 6 cut(s) | 84, 213, 488, 1481, 1820, 3280 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3377, 3409 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 4929 |
| Asp718I | GGTACC | 1 cut(s) | 3216 |
| AspA2I | CCTAGG | 1 cut(s) | 2074 |
| AspLEI | GCGC | 3 cut(s) | 181, 1851, 2115 |
| AsuC2I | CCSGG | 1 cut(s) | 872 |
| AsuII | TTCGAA | 1 cut(s) | 4043 |
| AvaI | CYCGRG | 2 cut(s) | 626, 4737 |
| AvaII | GGWCC | 8 cut(s) | 74, 345, 2431, 4563, 4661, 5056, 5413, 5573 |
| AvrII | CCTAGG | 1 cut(s) | 2074 |
| AxyI | CCTNAGG | 5 cut(s) | 498, 576, 1572, 4583, 5211 |
| BaeGI | GKGCMC | 3 cut(s) | 575, 1250, 5261 |
| BalI | TGGCCA | 1 cut(s) | 311 |
| BamHI | GGATCC | 1 cut(s) | 1110 |
| BanI | GGYRCC | 7 cut(s) | 469, 2855, 2905, 3216, 3469, 4850, 5453 |
| BanII | GRGCYC | 5 cut(s) | 575, 950, 2637, 2925, 4651 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 504, 536, 5280, 5312 |
| BbrPI | CACGTG | 1 cut(s) | 2054 |
| BbsI | GAAGAC | 5 cut(s) | 308, 2319, 2919, 3891, 5587 |
| Bbv12I | GWGCWC | 7 cut(s) | 418, 2458, 2637, 2925, 3099, 4651, 5261 |
| BbvCI | CCTCAGC | 2 cut(s) | 917, 2427 |
| BbvI | GCAGC | 6 cut(s) | 91, 1528, 3860, 3943, 4685, 4907 |
| BceAI | ACGGC | 1 cut(s) | 367 |
| BciVI | GTATCC | 2 cut(s) | 1211, 4569 |
| BclI | TGATCA | 2 cut(s) | 1780, 4071 |
| BcnI | CCSGG | 1 cut(s) | 872 |
| BfaI | CTAG | 8 cut(s) | 2075, 3638, 3954, 4286, 4485, 4494, 4892, 5303 |
| BfmI | CTRYAG | 4 cut(s) | 2485, 2770, 5112, 5227 |
| BfoI | RGCGCY | 1 cut(s) | 2116 |
| BfrI | CTTAAG | 1 cut(s) | 388 |
| BfuAI | ACCTGC | 4 cut(s) | 3897, 4108, 4625, 5014 |
| BfuI | GTATCC | 2 cut(s) | 1211, 4569 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 4441, 4748 |
| BglII | AGATCT | 2 cut(s) | 2489, 2776 |
| BlnI | CCTAGG | 1 cut(s) | 2074 |
| BlpI | GCTNAGC | 1 cut(s) | 1581 |
| BmcAI | AGTACT | 1 cut(s) | 1428 |
| Bme18I | GGWCC | 8 cut(s) | 74, 345, 2431, 4563, 4661, 5056, 5413, 5573 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 5411, 5579 |
| BmeT110I | CYCGRG | 2 cut(s) | 626, 4737 |
| BmrI | ACTGGG | 2 cut(s) | 351, 2723 |
| BmuI | ACTGGG | 2 cut(s) | 351, 2723 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1189, 2790 |
| BpiI | GAAGAC | 5 cut(s) | 308, 2319, 2919, 3891, 5587 |
| BpmI | CTGGAG | 6 cut(s) | 1244, 1479, 2313, 2483, 3441, 4350 |
| Bpu10I | CCTNAGC | 4 cut(s) | 917, 1907, 2427, 3581 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1581 |
| Bpu14I | TTCGAA | 1 cut(s) | 4043 |
| BpuEI | CTTGAG | 7 cut(s) | 566, 1136, 1919, 3133, 4103, 4377, 4596 |
| BpuMI | CCSGG | 1 cut(s) | 872 |
| BsaAI | YACGTR | 2 cut(s) | 2054, 3802 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1440, 2756 |
| BsaHI | GRCGYC | 3 cut(s) | 776, 2465, 3387 |
| BsaI | GGTCTC | 1 cut(s) | 5179 |
| BsaWI | WCCGGW | 6 cut(s) | 359, 793, 1107, 3135, 3749, 4974 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1335, 1365, 3602, 3632, 5487, 5517 |
| Bse21I | CCTNAGG | 5 cut(s) | 498, 576, 1572, 4583, 5211 |
| Bse3DI | GCAATG | 2 cut(s) | 896, 3530 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1440, 2756 |
| BseAI | TCCGGA | 4 cut(s) | 359, 3135, 3749, 4974 |
| BseJI | GATNNNNATC | 2 cut(s) | 1440, 2756 |
| BseMI | GCAATG | 2 cut(s) | 896, 3530 |
| BseRI | GAGGAG | 6 cut(s) | 2486, 3130, 3261, 3437, 3978, 4442 |
| BseSI | GKGCMC | 3 cut(s) | 575, 1250, 5261 |
| BseXI | GCAGC | 6 cut(s) | 91, 1528, 3860, 3943, 4685, 4907 |
| BseYI | CCCAGC | 2 cut(s) | 2349, 2598 |
| BsgI | GTGCAG | 1 cut(s) | 225 |
| Bsh1236I | CGCG | 2 cut(s) | 138, 2097 |
| BshNI | GGYRCC | 7 cut(s) | 469, 2855, 2905, 3216, 3469, 4850, 5453 |
| BsiHKAI | GWGCWC | 7 cut(s) | 418, 2458, 2637, 2925, 3099, 4651, 5261 |
| BsiHKCI | CYCGRG | 2 cut(s) | 626, 4737 |
| BsiSI | CCGG | 8 cut(s) | 360, 794, 872, 1108, 3136, 3750, 3893, 4975 |
| BslFI | GGGAC | 9 cut(s) | 854, 1177, 1353, 2084, 2434, 2711, 3374, 4637, 5586 |
| BsmFI | GGGAC | 9 cut(s) | 854, 1177, 1353, 2084, 2434, 2711, 3374, 4637, 5586 |
| BsmI | GAATGC | 3 cut(s) | 663, 2992, 5090 |
| Bso31I | GGTCTC | 1 cut(s) | 5179 |
| BsoBI | CYCGRG | 2 cut(s) | 626, 4737 |
| Bsp119I | TTCGAA | 1 cut(s) | 4043 |
| Bsp120I | GGGCCC | 1 cut(s) | 571 |
| Bsp13I | TCCGGA | 4 cut(s) | 359, 3135, 3749, 4974 |
| Bsp1407I | TGTACA | 2 cut(s) | 957, 4554 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1581 |
| Bsp19I | CCATGG | 2 cut(s) | 1242, 4198 |
| BspEI | TCCGGA | 4 cut(s) | 359, 3135, 3749, 4974 |
| BspFNI | CGCG | 2 cut(s) | 138, 2097 |
| BspHI | TCATGA | 1 cut(s) | 1746 |
| BspMI | ACCTGC | 4 cut(s) | 3897, 4108, 4625, 5014 |
| BspQI | GCTCTTC | 1 cut(s) | 2913 |
| BspT104I | TTCGAA | 1 cut(s) | 4043 |
| BspT107I | GGYRCC | 7 cut(s) | 469, 2855, 2905, 3216, 3469, 4850, 5453 |
| BspTI | CTTAAG | 1 cut(s) | 388 |
| BspTNI | GGTCTC | 1 cut(s) | 5179 |
| BsrBI | CCGCTC | 5 cut(s) | 353, 1150, 2357, 2812, 3656 |
| BsrDI | GCAATG | 2 cut(s) | 896, 3530 |
| BsrGI | TGTACA | 2 cut(s) | 957, 4554 |
| BssNAI | GTATAC | 2 cut(s) | 2953, 5278 |
| BssNI | GRCGYC | 3 cut(s) | 776, 2465, 3387 |
| BssT1I | CCWWGG | 9 cut(s) | 77, 464, 1242, 1346, 2074, 2416, 3199, 3642, 4198 |
| Bst1107I | GTATAC | 2 cut(s) | 2953, 5278 |
| Bst6I | CTCTTC | 7 cut(s) | 404, 441, 960, 1023, 1773, 2913, 4596 |
| BstACI | GRCGYC | 3 cut(s) | 776, 2465, 3387 |
| BstAFI | CTTAAG | 1 cut(s) | 388 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 3536, 4752, 5096, 5447 |
| BstAUI | TGTACA | 2 cut(s) | 957, 4554 |
| BstBAI | YACGTR | 2 cut(s) | 2054, 3802 |
| BstBI | TTCGAA | 1 cut(s) | 4043 |
| BstDSI | CCRYGG | 2 cut(s) | 1242, 4198 |
| BstEII | GGTNACC | 1 cut(s) | 559 |
| BstENI | CCTNNNNNAGG | 4 cut(s) | 440, 3004, 3477, 5210 |
| BstFNI | CGCG | 2 cut(s) | 138, 2097 |
| BstH2I | RGCGCY | 1 cut(s) | 2116 |
| BstHHI | GCGC | 3 cut(s) | 181, 1851, 2115 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1189, 2790 |
| BstPI | GGTNACC | 1 cut(s) | 559 |
| BstSFI | CTRYAG | 4 cut(s) | 2485, 2770, 5112, 5227 |
| BstSLI | GKGCMC | 3 cut(s) | 575, 1250, 5261 |
| BstUI | CGCG | 2 cut(s) | 138, 2097 |
| BstV1I | GCAGC | 6 cut(s) | 91, 1528, 3860, 3943, 4685, 4907 |
| BstV2I | GAAGAC | 5 cut(s) | 308, 2319, 2919, 3891, 5587 |
| BstX2I | RGATCY | 8 cut(s) | 432, 1033, 1110, 2489, 2551, 2751, 2776, 5307 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 1361, 2713, 3399, 4763 |
| BstYI | RGATCY | 8 cut(s) | 432, 1033, 1110, 2489, 2551, 2751, 2776, 5307 |
| BstZ17I | GTATAC | 2 cut(s) | 2953, 5278 |
| Bsu36I | CCTNAGG | 5 cut(s) | 498, 576, 1572, 4583, 5211 |
| BsuI | GTATCC | 2 cut(s) | 1211, 4569 |
| BtgI | CCRYGG | 2 cut(s) | 1242, 4198 |
| BtsI | GCAGTG | 1 cut(s) | 5298 |
| BveI | ACCTGC | 4 cut(s) | 3897, 4108, 4625, 5014 |
| CaiI | CAGNNNCTG | 3 cut(s) | 674, 1877, 4901 |
| CciI | TCATGA | 1 cut(s) | 1746 |
| CfoI | GCGC | 3 cut(s) | 181, 1851, 2115 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1804, 1839 |
| DraI | TTTAAA | 2 cut(s) | 1450, 2982 |
| DraIII | CACNNNGTG | 1 cut(s) | 3859 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 161 |
| DriI | GACNNNNNGTC | 2 cut(s) | 5411, 5579 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 161 |
| EaeI | YGGCCR | 2 cut(s) | 309, 4703 |
| Eam1104I | CTCTTC | 7 cut(s) | 404, 441, 960, 1023, 1773, 2913, 4596 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 5411, 5579 |
| EarI | CTCTTC | 7 cut(s) | 404, 441, 960, 1023, 1773, 2913, 4596 |
| EciI | GGCGGA | 2 cut(s) | 337, 611 |
| Ecl136II | GAGCTC | 3 cut(s) | 2635, 2923, 4649 |
| Eco130I | CCWWGG | 9 cut(s) | 77, 464, 1242, 1346, 2074, 2416, 3199, 3642, 4198 |
| Eco147I | AGGCCT | 1 cut(s) | 5521 |
| Eco24I | GRGCYC | 5 cut(s) | 575, 950, 2637, 2925, 4651 |
| Eco31I | GGTCTC | 1 cut(s) | 5179 |
| Eco32I | GATATC | 1 cut(s) | 3793 |
| Eco47I | GGWCC | 8 cut(s) | 74, 345, 2431, 4563, 4661, 5056, 5413, 5573 |
| Eco47III | AGCGCT | 1 cut(s) | 2114 |
| Eco53kI | GAGCTC | 3 cut(s) | 2635, 2923, 4649 |
| Eco57I | CTGAAG | 7 cut(s) | 881, 1556, 2676, 3010, 4944, 4958, 5307 |
| Eco72I | CACGTG | 1 cut(s) | 2054 |
| Eco81I | CCTNAGG | 5 cut(s) | 498, 576, 1572, 4583, 5211 |
| Eco88I | CYCGRG | 2 cut(s) | 626, 4737 |
| Eco91I | GGTNACC | 1 cut(s) | 559 |
| EcoICRI | GAGCTC | 3 cut(s) | 2635, 2923, 4649 |
| EcoNI | CCTNNNNNAGG | 4 cut(s) | 440, 3004, 3477, 5210 |
| EcoO109I | RGGNCCY | 5 cut(s) | 571, 572, 2431, 4563, 5573 |
| EcoO65I | GGTNACC | 1 cut(s) | 559 |
| EcoRV | GATATC | 1 cut(s) | 3793 |
| EcoT14I | CCWWGG | 9 cut(s) | 77, 464, 1242, 1346, 2074, 2416, 3199, 3642, 4198 |
| EcoT22I | ATGCAT | 1 cut(s) | 5092 |
| EcoT38I | GRGCYC | 5 cut(s) | 575, 950, 2637, 2925, 4651 |
| ErhI | CCWWGG | 9 cut(s) | 77, 464, 1242, 1346, 2074, 2416, 3199, 3642, 4198 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 528, 560 |
| FaqI | GGGAC | 9 cut(s) | 854, 1177, 1353, 2084, 2434, 2711, 3374, 4637, 5586 |
| FauI | CCCGC | 3 cut(s) | 2102, 2362, 2817 |
| FauNDI | CATATG | 1 cut(s) | 1360 |
| FbaI | TGATCA | 2 cut(s) | 1780, 4071 |
| FblI | GTMKAC | 3 cut(s) | 2952, 3063, 5277 |
| FriOI | GRGCYC | 5 cut(s) | 575, 950, 2637, 2925, 4651 |
| FspAI | RTGCGCAY | 1 cut(s) | 180 |
| FspBI | CTAG | 8 cut(s) | 2075, 3638, 3954, 4286, 4485, 4494, 4892, 5303 |
| FspI | TGCGCA | 1 cut(s) | 180 |
| GlaI | GCGC | 3 cut(s) | 180, 1850, 2114 |
| GsaI | CCCAGC | 2 cut(s) | 2353, 2602 |
| GsuI | CTGGAG | 6 cut(s) | 1244, 1479, 2313, 2483, 3441, 4350 |
| HaeII | RGCGCY | 1 cut(s) | 2116 |
| HapII | CCGG | 8 cut(s) | 360, 794, 872, 1108, 3136, 3750, 3893, 4975 |
| HhaI | GCGC | 3 cut(s) | 181, 1851, 2115 |
| Hin1I | GRCGYC | 3 cut(s) | 776, 2465, 3387 |
| Hin6I | GCGC | 3 cut(s) | 179, 1849, 2113 |
| HinP1I | GCGC | 3 cut(s) | 179, 1849, 2113 |
| HincII | GTYRAC | 6 cut(s) | 1206, 2463, 2662, 2767, 3064, 3109 |
| HindII | GTYRAC | 6 cut(s) | 1206, 2463, 2662, 2767, 3064, 3109 |
| HindIII | AAGCTT | 5 cut(s) | 607, 936, 1639, 4065, 4966 |
| HpaII | CCGG | 8 cut(s) | 360, 794, 872, 1108, 3136, 3750, 3893, 4975 |
| Hpy99I | CGWCG | 6 cut(s) | 143, 778, 2622, 2789, 3065, 3068 |
| Hsp92I | GRCGYC | 3 cut(s) | 776, 2465, 3387 |
| HspAI | GCGC | 3 cut(s) | 179, 1849, 2113 |
| KflI | GGGWCCC | 1 cut(s) | 5573 |
| Kpn2I | TCCGGA | 4 cut(s) | 359, 3135, 3749, 4974 |
| KpnI | GGTACC | 1 cut(s) | 3220 |
| Ksp22I | TGATCA | 2 cut(s) | 1780, 4071 |
| LguI | GCTCTTC | 1 cut(s) | 2913 |
| Lsp1109I | GCAGC | 6 cut(s) | 91, 1528, 3860, 3943, 4685, 4907 |
| MaeI | CTAG | 8 cut(s) | 2075, 3638, 3954, 4286, 4485, 4494, 4892, 5303 |
| MbiI | CCGCTC | 5 cut(s) | 353, 1150, 2357, 2812, 3656 |
| MfeI | CAATTG | 2 cut(s) | 1187, 1734 |
| MflI | RGATCY | 8 cut(s) | 432, 1033, 1110, 2489, 2551, 2751, 2776, 5307 |
| MlsI | TGGCCA | 1 cut(s) | 311 |
| MluI | ACGCGT | 1 cut(s) | 136 |
| MluNI | TGGCCA | 1 cut(s) | 311 |
| MlyI | GAGTC | 5 cut(s) | 229, 830, 1611, 1899, 4103 |
| MmeI | TCCRAC | 4 cut(s) | 1340, 2208, 4324, 5440 |
| Mox20I | TGGCCA | 1 cut(s) | 311 |
| Mph1103I | ATGCAT | 1 cut(s) | 5092 |
| MroI | TCCGGA | 4 cut(s) | 359, 3135, 3749, 4974 |
| MroXI | GAANNNNTTC | 1 cut(s) | 4929 |
| MscI | TGGCCA | 1 cut(s) | 311 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1359, 1956, 2231, 2966, 3397, 3925 |
| Msp20I | TGGCCA | 1 cut(s) | 311 |
| MspA1I | CMGCKG | 4 cut(s) | 1133, 2426, 4138, 5062 |
| MspCI | CTTAAG | 1 cut(s) | 388 |
| MspI | CCGG | 8 cut(s) | 360, 794, 872, 1108, 3136, 3750, 3893, 4975 |
| MunI | CAATTG | 2 cut(s) | 1187, 1734 |
| Mva1269I | GAATGC | 3 cut(s) | 663, 2992, 5090 |
| MvnI | CGCG | 2 cut(s) | 138, 2097 |
| NciI | CCSGG | 1 cut(s) | 872 |
| NcoI | CCATGG | 2 cut(s) | 1242, 4198 |
| NdeI | CATATG | 1 cut(s) | 1360 |
| NmeAIII | GCCGAG | 1 cut(s) | 5155 |
| NmuCI | GTSAC | 3 cut(s) | 559, 2190, 4352 |
| NsbI | TGCGCA | 1 cut(s) | 180 |
| NsiI | ATGCAT | 1 cut(s) | 5092 |
| NspV | TTCGAA | 1 cut(s) | 4043 |
| OliI | CACNNNNGTG | 1 cut(s) | 2231 |
| PaeI | GCATGC | 3 cut(s) | 1966, 4755, 5090 |
| PaeR7I | CTCGAG | 1 cut(s) | 4737 |
| PagI | TCATGA | 1 cut(s) | 1746 |
| PasI | CCCWGGG | 2 cut(s) | 200, 1793 |
| PceI | AGGCCT | 1 cut(s) | 5521 |
| PciI | ACATGT | 2 cut(s) | 954, 1951 |
| PciSI | GCTCTTC | 1 cut(s) | 2913 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 5664 |
| PctI | GAATGC | 3 cut(s) | 663, 2992, 5090 |
| PdmI | GAANNNNTTC | 1 cut(s) | 4929 |
| PflFI | GACNNNGTC | 1 cut(s) | 5501 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1526, 2158 |
| PfoI | TCCNGGA | 2 cut(s) | 667, 2499 |
| PleI | GAGTC | 5 cut(s) | 228, 829, 1610, 1898, 4103 |
| PmaCI | CACGTG | 1 cut(s) | 2054 |
| PmlI | CACGTG | 1 cut(s) | 2054 |
| PpsI | GAGTC | 5 cut(s) | 228, 829, 1610, 1898, 4103 |
| Ppu21I | YACGTR | 2 cut(s) | 2054, 3802 |
| PpuMI | RGGWCCY | 3 cut(s) | 2431, 4563, 5573 |
| PscI | ACATGT | 2 cut(s) | 954, 1951 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1189, 2790 |
| PsiI | TTATAA | 1 cut(s) | 2889 |
| Psp124BI | GAGCTC | 3 cut(s) | 2637, 2925, 4651 |
| Psp1406I | AACGTT | 2 cut(s) | 735, 4050 |
| Psp5II | RGGWCCY | 3 cut(s) | 2431, 4563, 5573 |
| PspCI | CACGTG | 1 cut(s) | 2054 |
| PspEI | GGTNACC | 1 cut(s) | 559 |
| PspFI | CCCAGC | 2 cut(s) | 2349, 2598 |
| PspOMI | GGGCCC | 1 cut(s) | 571 |
| PspPPI | RGGWCCY | 3 cut(s) | 2431, 4563, 5573 |
| PspXI | VCTCGAGB | 1 cut(s) | 4737 |
| PstNI | CAGNNNCTG | 3 cut(s) | 674, 1877, 4901 |
| PsuI | RGATCY | 8 cut(s) | 432, 1033, 1110, 2489, 2551, 2751, 2776, 5307 |
| PsyI | GACNNNGTC | 1 cut(s) | 5501 |
| PvuII | CAGCTG | 4 cut(s) | 1133, 2426, 4138, 5062 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1359, 1956, 2231, 2966, 3397, 3925 |
| SacI | GAGCTC | 3 cut(s) | 2637, 2925, 4651 |
| SalI | GTCGAC | 1 cut(s) | 3062 |
| SapI | GCTCTTC | 1 cut(s) | 2913 |
| ScaI | AGTACT | 1 cut(s) | 1428 |
| SchI | GAGTC | 5 cut(s) | 229, 830, 1611, 1899, 4103 |
| SfcI | CTRYAG | 4 cut(s) | 2485, 2770, 5112, 5227 |
| Sfr274I | CTCGAG | 1 cut(s) | 4737 |
| SfuI | TTCGAA | 1 cut(s) | 4043 |
| SgrDI | CGTCGACG | 1 cut(s) | 3062 |
| SinI | GGWCC | 8 cut(s) | 74, 345, 2431, 4563, 4661, 5056, 5413, 5573 |
| SlaI | CTCGAG | 1 cut(s) | 4737 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1359, 1956, 2231, 2966, 3397, 3925 |
| SmlI | CTYRAG | 9 cut(s) | 388, 545, 1151, 1934, 3112, 4082, 4392, 4611, 4737 |
| SmoI | CTYRAG | 9 cut(s) | 388, 545, 1151, 1934, 3112, 4082, 4392, 4611, 4737 |
| SphI | GCATGC | 3 cut(s) | 1966, 4755, 5090 |
| SseBI | AGGCCT | 1 cut(s) | 5521 |
| SspI | AATATT | 1 cut(s) | 1676 |
| SspMI | CTAG | 8 cut(s) | 2075, 3638, 3954, 4286, 4485, 4494, 4892, 5303 |
| SstI | GAGCTC | 3 cut(s) | 2637, 2925, 4651 |
| StuI | AGGCCT | 1 cut(s) | 5521 |
| StyI | CCWWGG | 9 cut(s) | 77, 464, 1242, 1346, 2074, 2416, 3199, 3642, 4198 |
| TatI | WGTACW | 5 cut(s) | 957, 1426, 4554, 4759, 4884 |
| TauI | GCSGC | 5 cut(s) | 353, 3509, 3656, 3953, 4301 |
| TseFI | GTSAC | 3 cut(s) | 559, 2190, 4352 |
| TseI | GCWGC | 6 cut(s) | 104, 1516, 3848, 3931, 4673, 4895 |
| Tsp45I | GTSAC | 3 cut(s) | 559, 2190, 4352 |
| TspGWI | ACGGA | 4 cut(s) | 2744, 2760, 4182, 5646 |
| Tth111I | GACNNNGTC | 1 cut(s) | 5501 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1526, 2158 |
| Vha464I | CTTAAG | 1 cut(s) | 388 |
| VneI | GTGCAC | 1 cut(s) | 5257 |
| VpaK11BI | GGWCC | 8 cut(s) | 74, 345, 2431, 4563, 4661, 5056, 5413, 5573 |
| XagI | CCTNNNNNAGG | 4 cut(s) | 440, 3004, 3477, 5210 |
| XapI | RAATTY | 6 cut(s) | 84, 213, 488, 1481, 1820, 3280 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 1268, 1426, 1697, 4216 |
| XhoI | CTCGAG | 1 cut(s) | 4737 |
| XmaJI | CCTAGG | 1 cut(s) | 2074 |
| XmiI | GTMKAC | 3 cut(s) | 2952, 3063, 5277 |
| XmnI | GAANNNNTTC | 1 cut(s) | 4929 |
| XspI | CTAG | 8 cut(s) | 2075, 3638, 3954, 4286, 4485, 4494, 4892, 5303 |
| ZraI | GACGTC | 2 cut(s) | 777, 3388 |
| ZrmI | AGTACT | 1 cut(s) | 1428 |
| Zsp2I | ATGCAT | 1 cut(s) | 5092 |