Rw7G014800

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000160
Physical Location & Seq
Reverse (-)
14554661 .. 14557963
3303 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G014800.1

Sequence Viewer

Length: 2721 bp
ATGGATTACGACCTCACTGAAGAAGGAATAGAAGCCTTCCACTCGATACATGAACGGTTGTCATCATACATGGTGGAAAAAGAGGCTTACGATCGCATTGCGACCTTGGAGGTCGTCAATGAAGAACTTGCTGATCCGGAGGATAAAGAGGAAGTCCATATTCAGCTCGCTCCGGCGGCGCTGGACGATACACCTCCCAAGGTTAAAGACCCTACTGAGAAGGTCAACTTGGGTACTGTAAGTGAGCCTATGGAGGTCTCTATCAGTGCTTACCTAGAGCCTAGCGAGAAACAGAGGCTCATCGACCTATTGCTAGAGTTCAAGGATTGCTTCGCGGAGAAGTATGAGGACATGCCCGGCCTGTCACCAGACTTGGTTTGTCATCAGTTACCAACTCTTGCTGACAAGAGGCCCGTCAAGCAGGAACCTCATCGAATGAACGCGGAGACCCAGATTCTGGTAAAGGAAGAAGTAGAGAAAATGCATAAGTCAGGCATTATAAGGGTTGCCAAGTATAATCAGTGGCTATCTAATATAGTGCCTGTCCGAAAGAAAAATGGCAAGATAAGAGTCTGCGTTGATTATAGAGACTTGAATCTTGCTACACCTAAAGACGTTTACCCCATGCCAGTCGCGGATATGTTGGTGGATGCGGTGGCAGGCCATGAATTGCTATCCTTCATGGATGGTACTGCAGGATATCACCAGATTCCGGTCGCTGAAGAAGACAGACACAAGACTGCTTTCCGCTGCCCTGGGTTTGCGGGGGTTTTCGAATATGTGGTCATGCCTTTTGGCTTGAAGAATGCCGGTGCGACGTATCAGCGAGCCATGAATCTGATCTTCCAAGACATACTTGGGAAAGTTTTAGAGATATACATTGACGACGTAGTCGTCAAGTCTCAGCAGAAAGGGGATCACATCGCGGATCTCAGGAAAGTGTTTGAGCGCATGCGCCGACATAAACTCAAGATGAACCCGGCCAAGTGTGTGTTTGGGGTTCAAGCAGGGGACTTTCTGGGGTTCATAGTCCACCAGCGAGGAATTGAGGTCCCCGAGGACAAGGCAAGCGCAGTCATTAATGCATCTCCCCCACGGACGAAGAAGGAATTACAGCGTCTTTTGGGGCAGGCGATCGCGGATTTTCTGGCACACCATCCCCCGCTAGAAATACCTGTACTAAAGGAGTTAGAGATTGCCTGCAACGCTACGACTCGACCAGATAAAGCGTGCATCCCTGAGTACGAGCTCTGGTATCAGGCTACAATCTTTCTACAGCCCTGGGTGTTATTTTTTGATGGTTCCAGAACGGACGCTATGGCTGGCGCGGGGATTGTTTTGGAGAACCCGGCAGGTGATCGCTTCTCTTATTCTTTCCAGCTTACATTCCAATGTACTAATAATCAGGCCGAATATGAGGCTCTCATCATTGGACTCGAAGTCTTGTTGGAAATGGGCGTCCGAGACGTTCAGATTCGCGGCGATTCCCAGCTCGTTATCAATCAGCTTCTGGAAAAATATCGCTGTACGAGTTGGCTGCTCATCCCATACCTGAATCGCGCCATTGAGCTTCTGGACCAATTTACAGACGTTGATATGGAACATATACCACGTGAACGTAACTTTGCTGCTAATGAGCTCGCTCAGTTAGCTACAGGCATCACCTTGAAGTACAGAGTACGCGAGCGCATTCTGAAAGTTGAGCGTCGCACACTACCTTCGTGGCTTGCTCGACCTGATCCTCCAGATGATCCCGTGGTTGCGGTACTAGAGCCCATTGATGTCGATTGGCGGATTCCACTGATTGAATACCTCAAACAACCAGACTCCAGCGCTGATAGGAAGATTCGTTTCCTCGCATTGAATTACTTCCTTAGAGGCGACGAACTGCGCAGACGTGGAGAAGAAGGTATAGATTTTCGATGTGTCTATGGTCGCGAGGCCAAGAGATTGATGCGCGAGGTACACACGGGGATATGTGGATCTCATCAAGCTGGCCCTAAAATGCGTTGGCTCCTCCGACGTCATGGTTATTATTGGCCCAGCGTTTTGAAGGATTGTATTGCATTCGCTAAAAGCTGTGCGGACTGTCAGGCACACGGTCCTGTCCAGCACGTTCCTAACATTCCTATGCAACCTATCATTAAACCTTGGCCTGCGCGAGGCTGGGCATTGGACTTGATTGGAATGATCCATCCTCATTCTTCCTTACAGCACAAGTTTATCATCGTCGCCACTGATTACTTCACAAAATGGGTTGAAGCAGAGCCTCTGAAGGAGGCCTCCGGCGCTACCATTCGCCAGGGGGCAGCGTTCATGGGGGGCCCCGTGGAGGAACTGGTGAATGATTTTGGTATTCAATTCATACACAGTACTCCGTACTATGCTCAATCTAATGGTCAGGCGGAGGCGAGCAACAAGACAATCATCACCTTACTTAAGAAGATGTTGGTGGAGAATCCTCGACAATGGCATGATACTTTGTACGAAACACTTTGGGCCTATCGCACTTCAAAACGTAATCCCACCGCCACGACGCCGTACGCGCTTATGTTTGGACATGACGCTGTCTTACCATTAGAAATTAATGTTCACTCCCTACGAGTCCAAGAACAGCATCATTTGATTGGCGAGGATTATGTTCAAGAAATGTGGCAGGAGCACGAAGACTTAAGCGAGCAGCGCTTGGCCGCTTTGGACAATTTGGTGATGGAAAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

906

Amino Acids

103.47

Weight (kDa)

5.69

Isoelectric Point (pI)

41.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_1 PF00078 182 - 344 2.8e-32 Reverse transcriptase (RNA-dependent DNA polymerase)
RNase_H PF00075 429 - 542 5.1e-06 RNase H
RVT_3 PF13456 432 - 550 1.9e-20 Reverse transcriptase-like
Integrase_H2C2 PF17921 647 - 700 2e-07 Integrase zinc binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000160)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g11612 FvH4_2g25851 FvH4_3g22802 FvH4_3g22805 FvH4_3g31361 FvH4_3g31382 FvH4_4g05272 FvH4_4g05273 FvH4_4g14567 FvH4_4g15161 FvH4_5g22540 FvH4_6g13113 FvH4_6g31923 FvH4_6g31924 FvH4_6g33651 FvH4_6g45122 FvH4_7g03662
pyrus_communis pycom01g04240 pycom01g24010 pycom02g18210 pycom02g19420 pycom05g06510 pycom09g15750 pycom09g18940 pycom12g02580 pycom12g03100 pycom12g08310 pycom13g22710 pycom13g28060 pycom16g18340 pycom16g18350 pycom16g24880 pycom16g26240 pycom461g00260 pycom520g00980 pycom520g01320
rosa_chinensis RchiOBHm_Chr1g0320731 RchiOBHm_Chr2g0102771 RchiOBHm_Chr3g0462151 RchiOBHm_Chr5g0038141 RchiOBHm_Chr5g0069371 RchiOBHm_Chr7g0239101
rosa_multiflora Rmu_co8038252.1_g000001 Rmu_co8138412.1_g000001 Rmu_co8331087.1_g000001 Rmu_co8479311.1_g000001 Rmu_sc0000112.1_g000018 Rmu_sc0000346.1_g000012 Rmu_sc0002102.1_g000002 Rmu_sc0003505.1_g000013 Rmu_sc0004249.1_g000007 Rmu_sc0004448.1_g000010 Rmu_sc0004594.1_g000011 Rmu_sc0004915.1_g000010 Rmu_sc0008019.1_g000019 Rmu_sc0008303.1_g000001 Rmu_sc0008355.1_g000005 Rmu_sc0009253.1_g000018 Rmu_sc0010211.1_g000002 Rmu_sc0010252.1_g000009 Rmu_sc0011534.1_g000008 Rmu_sc0014811.1_g000009 Rmu_sc0019475.1_g000001 Rmu_sc0024897.1_g000001 Rmu_sc0024898.1_g000001 Rmu_sc0031791.1_g000001 Rmu_sc0038715.1_g000001
rosa_roxburghii Rroxscaffold_165G00436940 Rroxscaffold_174G00435270 Rroxscaffold_177G00434330 Rroxscaffold_177G00434340 Rroxscaffold_177G00434350 Rroxscaffold_1G00002160 Rroxscaffold_1G00025260 Rroxscaffold_1G00042950 Rroxscaffold_1G00068010 Rroxscaffold_2G00107530 Rroxscaffold_3G00221190 Rroxscaffold_3G00221520 Rroxscaffold_3G00223200 Rroxscaffold_4G00322230 Rroxscaffold_4G00331810 Rroxscaffold_5G00385150 Rroxscaffold_5G00387510 Rroxscaffold_6G00410520 Rroxscaffold_6G00423360 Rroxscaffold_6G00423370 Rroxscaffold_6G00429210 Rroxscaffold_7G00158300 Rroxscaffold_7G00163480 Rroxscaffold_7G00171410 Rroxscaffold_7G00178940 Rroxscaffold_7G00199480 Rroxscaffold_7G00205630 Rroxscaffold_7G00207440
rosa_rugosa Rorug01G0056400 Rorug04G0063900 Rorug05G0251400 Rorug07G0221900
rosa_samantha Rh1DG169400 Rh2AG292900 Rh2DG519200 Rh4DG260600 Rh5AG042600 Rh6BG117500
rosa_wichuraiana Rw0G001900 Rw0G005150 Rw0G006380 Rw0G015140 Rw0G016320 Rw0G019440 Rw0G019840 Rw0G023740 Rw1G001590 Rw1G002180 Rw1G003560 Rw1G004280 Rw1G006110 Rw1G006680 Rw1G007920 Rw1G008480 Rw1G009120 Rw1G010310 Rw1G014900 Rw1G019650 Rw1G022070 Rw1G022170 Rw1G041570 Rw2G002740 Rw2G005760 Rw2G032370 Rw2G046770 Rw2G050600 Rw2G051420 Rw3G015930 Rw3G016280 Rw3G019580 Rw3G028420 Rw4G003430 Rw4G005350 Rw4G007530 Rw4G008150 Rw4G009580 Rw4G010250 Rw4G015800 Rw4G017000 Rw4G017910 Rw4G018510 Rw4G019700 Rw4G031010 Rw5G012650 Rw5G020140 Rw5G022060 Rw5G034420 Rw5G035560 Rw5G043010 Rw5G046750 Rw5G047340 Rw5G049500 Rw6G001390 Rw6G002210 Rw6G004530 Rw6G004770 Rw6G005100 Rw6G005890 Rw6G011860 Rw6G014680 Rw6G019480 Rw6G028970 Rw6G033800 Rw7G013050 Rw7G014800 Rw7G025760 Rw7G025850 Rw7G026730 Rw7G026870 Rw7G036330 Rw7G036430 Rw7G039320 Rw7G039510 Rw7G039560 Rw7G041370 Rw7G042050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 500
AarI CACCTGC 1 cut(s) 1343
AasI GACNNNNNNGTC 2 cut(s) 890, 893
AatII GACGTC 1 cut(s) 2026
Acc16I TGCGCA 1 cut(s) 1892
Acc36I ACCTGC 1 cut(s) 1343
AccB7I CCANNNNNTGG 1 cut(s) 457
AccIII TCCGGA 1 cut(s) 136
AclWI GGATC 7 cut(s) 128, 924, 936, 1733, 1745, 1990, 2185
AcoI YGGCCR 2 cut(s) 981, 2688
AcuI CTGAAG 3 cut(s) 39, 741, 2294
AcvI CACGTG 1 cut(s) 1613
AcyI GRCGYC 3 cut(s) 1458, 2023, 2537
AfeI AGCGCT 2 cut(s) 1834, 2684
AfiI CCNNNNNNNGG 4 cut(s) 457, 712, 2162, 2332
AflII CTTAAG 2 cut(s) 2438, 2671
AhdI GACNNNNNGTC 1 cut(s) 1439
AjiI CACGTC 1 cut(s) 1898
AjnI CCWGG 3 cut(s) 754, 1280, 2301
AjuI GAANNNNNNNTTGG 2 cut(s) 212, 244
Alw21I GWGCWC 3 cut(s) 1251, 1641, 2664
Alw26I GTCTC 5 cut(s) 262, 440, 582, 906, 1458
AlwI GGATC 7 cut(s) 128, 924, 936, 1733, 1745, 1990, 2185
AlwNI CAGNNNCTG 2 cut(s) 457, 1510
Ama87I CYCGRG 1 cut(s) 1055
Aor13HI TCCGGA 1 cut(s) 136
Aor51HI AGCGCT 2 cut(s) 1834, 2684
ApaI GGGCCC 1 cut(s) 2327
ApeKI GCWGC 5 cut(s) 750, 1537, 1628, 2309, 2680
ArsI GACNNNNNNTTYG 2 cut(s) 768, 800
AseI ATTAAT 2 cut(s) 1080, 2586
AsiSI GCGATCGC 1 cut(s) 1137
Asp700I GAANNNNTTC 1 cut(s) 1868
AspS9I GGNCC 9 cut(s) 411, 1051, 1576, 1997, 2040, 2102, 2323, 2324, 2499
AsuC2I CCSGG 3 cut(s) 357, 980, 1349
AsuHPI GGTGA 7 cut(s) 357, 695, 1367, 1654, 2353, 2422, 2719
AsuII TTCGAA 1 cut(s) 774
AvaI CYCGRG 1 cut(s) 1055
AvaII GGWCC 3 cut(s) 1051, 1576, 2102
BaeGI GKGCMC 1 cut(s) 2327
BanII GRGCYC 4 cut(s) 1251, 1641, 1776, 2327
BbrPI CACGTG 1 cut(s) 1613
BbsI GAAGAC 2 cut(s) 732, 2673
Bbv12I GWGCWC 3 cut(s) 1251, 1641, 2664
BbvI GCAGC 5 cut(s) 737, 1524, 1615, 2321, 2692
BccI CCATC 5 cut(s) 680, 1164, 1292, 2202, 2704
BceAI ACGGC 1 cut(s) 2524
BcgI CGANNNNNNTGC 4 cut(s) 80, 114, 1519, 1553
BciT130I CCWGG 3 cut(s) 756, 1282, 2303
BcnI CCSGG 3 cut(s) 357, 980, 1349
BcoDI GTCTC 5 cut(s) 262, 440, 582, 906, 1458
BfaI CTAG 5 cut(s) 275, 282, 314, 1166, 1769
BfmI CTRYAG 3 cut(s) 693, 1274, 1653
BfoI RGCGCY 4 cut(s) 182, 1836, 2292, 2686
BfrI CTTAAG 2 cut(s) 2438, 2671
BfuAI ACCTGC 1 cut(s) 1343
BisI GCNGC 8 cut(s) 177, 751, 1480, 1538, 1629, 2310, 2681, 2691
BlsI GCNGC 8 cut(s) 178, 752, 1481, 1539, 1630, 2311, 2682, 2692
BmcAI AGTACT 1 cut(s) 2374
Bme1390I CCNGG 6 cut(s) 357, 756, 980, 1282, 1349, 2303
Bme18I GGWCC 3 cut(s) 1051, 1576, 2102
BmeRI GACNNNNNGTC 1 cut(s) 1439
BmeT110I CYCGRG 1 cut(s) 1055
BmgBI CACGTC 1 cut(s) 1898
BmgT120I GGNCC 9 cut(s) 411, 1051, 1576, 1997, 2040, 2102, 2323, 2324, 2499
BmiI GGNNCC 7 cut(s) 426, 1053, 1303, 2015, 2324, 2325, 2326
BmrFI CCNGG 6 cut(s) 357, 756, 980, 1282, 1349, 2303
BmsI GCATC 6 cut(s) 640, 1094, 1242, 1668, 1944, 2626
BpiI GAAGAC 2 cut(s) 732, 2673
BpmI CTGGAG 2 cut(s) 1728, 1813
Bpu14I TTCGAA 1 cut(s) 774
BpuEI CTTGAG 1 cut(s) 953
BpuMI CCSGG 3 cut(s) 357, 980, 1349
BsaAI YACGTR 1 cut(s) 1613
BsaHI GRCGYC 3 cut(s) 1458, 2023, 2537
BsaI GGTCTC 2 cut(s) 262, 440
BsaWI WCCGGW 2 cut(s) 136, 712
Bsc4I CCNNNNNNNGG 4 cut(s) 457, 712, 2162, 2332
Bse118I RCCGGY 1 cut(s) 809
Bse1I ACTGG 2 cut(s) 629, 2343
Bse3DI GCAATG 1 cut(s) 96
BseAI TCCGGA 1 cut(s) 136
BseBI CCWGG 3 cut(s) 756, 1282, 2303
BseGI GGATG 6 cut(s) 655, 691, 1156, 1233, 1542, 2194
BseLI CCNNNNNNNGG 4 cut(s) 457, 712, 2162, 2332
BseMI GCAATG 1 cut(s) 96
BseMII CTCAG 5 cut(s) 207, 917, 946, 1230, 1658
BseNI ACTGG 2 cut(s) 629, 2343
BseRI GAGGAG 1 cut(s) 2006
BseSI GKGCMC 1 cut(s) 2327
BseXI GCAGC 5 cut(s) 737, 1524, 1615, 2321, 2692
BseYI CCCAGC 3 cut(s) 1488, 2042, 2166
Bsh1285I CGRYCG 3 cut(s) 94, 717, 1137
BsiEI CGRYCG 3 cut(s) 94, 717, 1137
BsiHKAI GWGCWC 3 cut(s) 1251, 1641, 2664
BsiHKCI CYCGRG 1 cut(s) 1055
BsiSI CCGG 8 cut(s) 137, 173, 357, 713, 810, 980, 1349, 2286
BsiWI CGTACG 1 cut(s) 2541
BslFI GGGAC 2 cut(s) 1025, 1037
BslI CCNNNNNNNGG 4 cut(s) 457, 712, 2162, 2332
BsmAI GTCTC 5 cut(s) 262, 440, 582, 906, 1458
BsmBI CGTCTC 1 cut(s) 1458
BsmFI GGGAC 2 cut(s) 1025, 1037
BsmI GAATGC 3 cut(s) 811, 1689, 2066
Bso31I GGTCTC 2 cut(s) 262, 440
BsoBI CYCGRG 1 cut(s) 1055
Bsp119I TTCGAA 1 cut(s) 774
Bsp120I GGGCCC 1 cut(s) 2323
Bsp1286I GDGCHC 5 cut(s) 1251, 1641, 1776, 2327, 2664
Bsp13I TCCGGA 1 cut(s) 136
Bsp68I TCGCGA 1 cut(s) 1938
BspCNI CTCAG 5 cut(s) 208, 916, 945, 1231, 1657
BspEI TCCGGA 1 cut(s) 136
BspLI GGNNCC 7 cut(s) 426, 1053, 1303, 2015, 2324, 2325, 2326
BspMAI CTGCAG 1 cut(s) 697
BspMI ACCTGC 1 cut(s) 1343
BspPI GGATC 7 cut(s) 128, 924, 936, 1733, 1745, 1990, 2185
BspT104I TTCGAA 1 cut(s) 774
BspTI CTTAAG 2 cut(s) 2438, 2671
BspTNI GGTCTC 2 cut(s) 262, 440
BsrDI GCAATG 1 cut(s) 96
BsrFI RCCGGY 1 cut(s) 809
BsrI ACTGG 2 cut(s) 629, 2343
BssAI RCCGGY 1 cut(s) 809
BssNI GRCGYC 3 cut(s) 1458, 2023, 2537
BssT1I CCWWGG 3 cut(s) 105, 198, 2150
Bst2UI CCWGG 3 cut(s) 756, 1282, 2303
Bst4CI ACNGT 5 cut(s) 57, 238, 2090, 2102, 2372
BstACI GRCGYC 3 cut(s) 1458, 2023, 2537
BstAFI CTTAAG 2 cut(s) 2438, 2671
BstBAI YACGTR 1 cut(s) 1613
BstBI TTCGAA 1 cut(s) 774
BstDEI CTNAG 6 cut(s) 216, 903, 932, 1239, 1644, 1874
BstDSI CCRYGG 3 cut(s) 1094, 1755, 2328
BstENI CCTNNNNNAGG 1 cut(s) 2160
BstF5I GGATG 6 cut(s) 655, 691, 1156, 1233, 1542, 2194
BstH2I RGCGCY 4 cut(s) 182, 1836, 2292, 2686
BstMAI GTCTC 5 cut(s) 262, 440, 582, 906, 1458
BstMCI CGRYCG 3 cut(s) 94, 717, 1137
BstMWI GCNNNNNNNGC 7 cut(s) 176, 418, 1205, 1649, 2288, 2545, 2682
BstNI CCWGG 3 cut(s) 756, 1282, 2303
BstNSI RCATGY 2 cut(s) 355, 955
BstSCI CCNGG 6 cut(s) 355, 754, 978, 1280, 1347, 2301
BstSFI CTRYAG 3 cut(s) 693, 1274, 1653
BstSLI GKGCMC 1 cut(s) 2327
BstV1I GCAGC 5 cut(s) 737, 1524, 1615, 2321, 2692
BstV2I GAAGAC 2 cut(s) 732, 2673
BstX2I RGATCY 2 cut(s) 928, 1982
BstYI RGATCY 2 cut(s) 928, 1982
BtgI CCRYGG 3 cut(s) 1094, 1755, 2328
BtgZI GCGATG 1 cut(s) 907
BtrI CACGTC 1 cut(s) 1898
BtsCI GGATG 6 cut(s) 655, 691, 1156, 1233, 1542, 2194
BtsIMutI CAGTG 5 cut(s) 15, 271, 527, 1799, 2235
BtuMI TCGCGA 1 cut(s) 1938
BveI ACCTGC 1 cut(s) 1343
CaiI CAGNNNCTG 2 cut(s) 457, 1510
Cfr10I RCCGGY 1 cut(s) 809
Cfr13I GGNCC 9 cut(s) 411, 1051, 1576, 1997, 2040, 2102, 2323, 2324, 2499
CseI GACGC 6 cut(s) 1106, 1322, 1447, 1694, 2545, 2573
CspCI CAANNNNNGTGG 2 cut(s) 2633, 2668
DdeI CTNAG 6 cut(s) 216, 903, 932, 1239, 1644, 1874
DrdI GACNNNNNNGTC 2 cut(s) 890, 893
DriI GACNNNNNGTC 1 cut(s) 1439
DseDI GACNNNNNNGTC 2 cut(s) 890, 893
EaeI YGGCCR 2 cut(s) 981, 2688
Eam1105I GACNNNNNGTC 1 cut(s) 1439
EciI GGCGGA 2 cut(s) 1807, 2420
Ecl136II GAGCTC 2 cut(s) 1249, 1639
Eco130I CCWWGG 3 cut(s) 105, 198, 2150
Eco147I AGGCCT 1 cut(s) 2282
Eco24I GRGCYC 4 cut(s) 1251, 1641, 1776, 2327
Eco31I GGTCTC 2 cut(s) 262, 440
Eco32I GATATC 1 cut(s) 701
Eco47I GGWCC 3 cut(s) 1051, 1576, 2102
Eco47III AGCGCT 2 cut(s) 1834, 2684
Eco53kI GAGCTC 2 cut(s) 1249, 1639
Eco57I CTGAAG 3 cut(s) 39, 741, 2294
Eco72I CACGTG 1 cut(s) 1613
Eco88I CYCGRG 1 cut(s) 1055
EcoICRI GAGCTC 2 cut(s) 1249, 1639
EcoNI CCTNNNNNAGG 1 cut(s) 2160
EcoO109I RGGNCCY 3 cut(s) 1051, 2323, 2324
EcoRII CCWGG 3 cut(s) 754, 1280, 2301
EcoRV GATATC 1 cut(s) 701
EcoT14I CCWWGG 3 cut(s) 105, 198, 2150
EcoT22I ATGCAT 2 cut(s) 486, 1087
EcoT38I GRGCYC 4 cut(s) 1251, 1641, 1776, 2327
ErhI CCWWGG 3 cut(s) 105, 198, 2150
Esp3I CGTCTC 1 cut(s) 1458
FalI AAGNNNNNCTT 6 cut(s) 212, 244, 314, 346, 840, 872
FaqI GGGAC 2 cut(s) 1025, 1037
FauI CCCGC 3 cut(s) 757, 1170, 1321
Fnu4HI GCNGC 8 cut(s) 177, 751, 1480, 1538, 1629, 2310, 2681, 2691
FokI GGATG 6 cut(s) 662, 698, 1143, 1220, 1529, 2181
FriOI GRGCYC 4 cut(s) 1251, 1641, 1776, 2327
Fsp4HI GCNGC 8 cut(s) 177, 751, 1480, 1538, 1629, 2310, 2681, 2691
FspBI CTAG 5 cut(s) 275, 282, 314, 1166, 1769
FspI TGCGCA 1 cut(s) 1892
GluI GCNGC 8 cut(s) 177, 751, 1480, 1538, 1629, 2310, 2681, 2691
GsaI CCCAGC 3 cut(s) 1492, 2046, 2170
GsuI CTGGAG 2 cut(s) 1728, 1813
HaeII RGCGCY 4 cut(s) 182, 1836, 2292, 2686
HapII CCGG 8 cut(s) 137, 173, 357, 713, 810, 980, 1349, 2286
HgaI GACGC 6 cut(s) 1106, 1322, 1447, 1694, 2545, 2573
Hin1I GRCGYC 3 cut(s) 1458, 2023, 2537
HincII GTYRAC 1 cut(s) 226
HindII GTYRAC 1 cut(s) 226
HpaII CCGG 8 cut(s) 137, 173, 357, 713, 810, 980, 1349, 2286
HphI GGTGA 7 cut(s) 357, 695, 1367, 1654, 2353, 2422, 2719
Hpy166II GTNNAC 6 cut(s) 226, 619, 1033, 1616, 1966, 2593
Hpy188I TCNGA 7 cut(s) 548, 840, 1463, 1473, 1695, 2021, 2274
Hpy188III TCNNGA 9 cut(s) 137, 934, 970, 1305, 1511, 1574, 1745, 1937, 2645
Hpy8I GTNNAC 6 cut(s) 226, 619, 1033, 1616, 1966, 2593
Hpy99I CGWCG 7 cut(s) 820, 890, 1710, 1886, 2025, 2234, 2539
HpyAV CCTTC 9 cut(s) 17, 46, 214, 688, 1099, 1728, 1901, 2047, 2269
HpyCH4III ACNGT 5 cut(s) 57, 238, 2090, 2102, 2372
HpyCH4V TGCA 7 cut(s) 484, 695, 1085, 1203, 1233, 2066, 2134
HpyF10VI GCNNNNNNNGC 7 cut(s) 176, 418, 1205, 1649, 2288, 2545, 2682
HpyF3I CTNAG 6 cut(s) 216, 903, 932, 1239, 1644, 1874
Hsp92I GRCGYC 3 cut(s) 1458, 2023, 2537
Kpn2I TCCGGA 1 cut(s) 136
LmnI GCTCC 3 cut(s) 175, 2019, 2659
Lsp1109I GCAGC 5 cut(s) 737, 1524, 1615, 2321, 2692
LweI GCATC 6 cut(s) 640, 1094, 1242, 1668, 1944, 2626
MaeI CTAG 5 cut(s) 275, 282, 314, 1166, 1769
MaeIII GTNAC 3 cut(s) 363, 387, 1619
MflI RGATCY 2 cut(s) 928, 1982
MhlI GDGCHC 5 cut(s) 1251, 1641, 1776, 2327, 2664
MluCI AATT 8 cut(s) 668, 1044, 1109, 1580, 1864, 2360, 2583, 2701
MlyI GAGTC 5 cut(s) 579, 1207, 1428, 1820, 2613
MmeI TCCRAC 2 cut(s) 1428, 2044
Mph1103I ATGCAT 2 cut(s) 486, 1087
MroI TCCGGA 1 cut(s) 136
MroXI GAANNNNTTC 1 cut(s) 1868
MseI TTAA 6 cut(s) 204, 1080, 2145, 2439, 2586, 2672
MslI CAYNNNNRTG 2 cut(s) 1390, 2129
MspA1I CMGCKG 1 cut(s) 750
MspCI CTTAAG 2 cut(s) 2438, 2671
MspI CCGG 8 cut(s) 137, 173, 357, 713, 810, 980, 1349, 2286
MspR9I CCNGG 6 cut(s) 357, 756, 980, 1282, 1349, 2303
Mva1269I GAATGC 3 cut(s) 811, 1689, 2066
MvaI CCWGG 3 cut(s) 756, 1282, 2303
MwoI GCNNNNNNNGC 7 cut(s) 176, 418, 1205, 1649, 2288, 2545, 2682
NciI CCSGG 3 cut(s) 357, 980, 1349
NlaIV GGNNCC 7 cut(s) 426, 1053, 1303, 2015, 2324, 2325, 2326
NmuCI GTSAC 1 cut(s) 363
NruI TCGCGA 1 cut(s) 1938
NsbI TGCGCA 1 cut(s) 1892
NsiI ATGCAT 2 cut(s) 486, 1087
NspI RCATGY 2 cut(s) 355, 955
NspV TTCGAA 1 cut(s) 774
PaeI GCATGC 1 cut(s) 955
PaqCI CACCTGC 1 cut(s) 1343
PasI CCCWGGG 2 cut(s) 755, 1281
PceI AGGCCT 1 cut(s) 2282
PcsI WCGNNNNNNNCGW 1 cut(s) 891
PctI GAATGC 3 cut(s) 811, 1689, 2066
PdmI GAANNNNTTC 1 cut(s) 1868
Pfl23II CGTACG 1 cut(s) 2541
PflFI GACNNNGTC 2 cut(s) 890, 2567
PflMI CCANNNNNTGG 1 cut(s) 457
PkrI GCNGC 8 cut(s) 178, 752, 1481, 1539, 1630, 2311, 2682, 2692
Ple19I CGATCG 2 cut(s) 94, 1137
PleI GAGTC 5 cut(s) 578, 1207, 1428, 1820, 2612
PmaCI CACGTG 1 cut(s) 1613
PmlI CACGTG 1 cut(s) 1613
PpsI GAGTC 5 cut(s) 578, 1207, 1428, 1820, 2612
Ppu21I YACGTR 1 cut(s) 1613
PpuMI RGGWCCY 1 cut(s) 1051
PshBI ATTAAT 2 cut(s) 1080, 2586
PsiI TTATAA 1 cut(s) 500
Psp124BI GAGCTC 2 cut(s) 1251, 1641
Psp5II RGGWCCY 1 cut(s) 1051
Psp6I CCWGG 3 cut(s) 754, 1280, 2301
PspCI CACGTG 1 cut(s) 1613
PspFI CCCAGC 3 cut(s) 1488, 2042, 2166
PspGI CCWGG 3 cut(s) 754, 1280, 2301
PspLI CGTACG 1 cut(s) 2541
PspN4I GGNNCC 7 cut(s) 426, 1053, 1303, 2015, 2324, 2325, 2326
PspOMI GGGCCC 1 cut(s) 2323
PspPI GGNCC 9 cut(s) 411, 1051, 1576, 1997, 2040, 2102, 2323, 2324, 2499
PspPPI RGGWCCY 1 cut(s) 1051
PstI CTGCAG 1 cut(s) 697
PstNI CAGNNNCTG 2 cut(s) 457, 1510
PsuI RGATCY 2 cut(s) 928, 1982
PsyI GACNNNGTC 2 cut(s) 890, 2567
PvuI CGATCG 2 cut(s) 94, 1137
RgaI GCGATCGC 1 cut(s) 1137
RruI TCGCGA 1 cut(s) 1938
RseI CAYNNNNRTG 2 cut(s) 1390, 2129
SacI GAGCTC 2 cut(s) 1251, 1641
SaqAI TTAA 6 cut(s) 204, 1080, 2145, 2439, 2586, 2672
SatI GCNGC 8 cut(s) 177, 751, 1480, 1538, 1629, 2310, 2681, 2691
Sau96I GGNCC 9 cut(s) 411, 1051, 1576, 1997, 2040, 2102, 2323, 2324, 2499
ScaI AGTACT 1 cut(s) 2374
SchI GAGTC 5 cut(s) 579, 1207, 1428, 1820, 2613
ScrFI CCNGG 6 cut(s) 357, 756, 980, 1282, 1349, 2303
SduI GDGCHC 5 cut(s) 1251, 1641, 1776, 2327, 2664
SfaAI GCGATCGC 1 cut(s) 1137
SfaNI GCATC 6 cut(s) 640, 1094, 1242, 1668, 1944, 2626
SfcI CTRYAG 3 cut(s) 693, 1274, 1653
SfuI TTCGAA 1 cut(s) 774
SgfI GCGATCGC 1 cut(s) 1137
SinI GGWCC 3 cut(s) 1051, 1576, 2102
SmiMI CAYNNNNRTG 2 cut(s) 1390, 2129
SmlI CTYRAG 3 cut(s) 968, 2438, 2671
SmoI CTYRAG 3 cut(s) 968, 2438, 2671
SphI GCATGC 1 cut(s) 955
Sse9I AATT 8 cut(s) 668, 1044, 1109, 1580, 1864, 2360, 2583, 2701
SseBI AGGCCT 1 cut(s) 2282
SspMI CTAG 5 cut(s) 275, 282, 314, 1166, 1769
SstI GAGCTC 2 cut(s) 1251, 1641
StuI AGGCCT 1 cut(s) 2282
StyD4I CCNGG 6 cut(s) 355, 754, 978, 1280, 1347, 2301
StyI CCWWGG 3 cut(s) 105, 198, 2150
TaaI ACNGT 5 cut(s) 57, 238, 2090, 2102, 2372
TasI AATT 8 cut(s) 668, 1044, 1109, 1580, 1864, 2360, 2583, 2701
TatI WGTACW 4 cut(s) 1177, 1394, 1671, 2372
TauI GCSGC 3 cut(s) 179, 1482, 2693
Tru1I TTAA 6 cut(s) 204, 1080, 2145, 2439, 2586, 2672
Tru9I TTAA 6 cut(s) 204, 1080, 2145, 2439, 2586, 2672
TscAI CASTG 5 cut(s) 22, 271, 527, 1806, 2242
TseFI GTSAC 1 cut(s) 363
TseI GCWGC 5 cut(s) 750, 1537, 1628, 2309, 2680
Tsp45I GTSAC 1 cut(s) 363
TspGWI ACGGA 3 cut(s) 1111, 1325, 2367
TspRI CASTG 5 cut(s) 22, 271, 527, 1806, 2242
Tth111I GACNNNGTC 2 cut(s) 890, 2567
Van91I CCANNNNNTGG 1 cut(s) 457
Vha464I CTTAAG 2 cut(s) 2438, 2671
VpaK11BI GGWCC 3 cut(s) 1051, 1576, 2102
VspI ATTAAT 2 cut(s) 1080, 2586
XagI CCTNNNNNAGG 1 cut(s) 2160
XceI RCATGY 2 cut(s) 355, 955
XcmI CCANNNNNNNNNTGG 2 cut(s) 854, 1570
XmnI GAANNNNTTC 1 cut(s) 1868
XspI CTAG 5 cut(s) 275, 282, 314, 1166, 1769
ZraI GACGTC 1 cut(s) 2024
ZrmI AGTACT 1 cut(s) 2374
Zsp2I ATGCAT 2 cut(s) 486, 1087
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.