Rw5G035560

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000160
Physical Location & Seq
Reverse (-)
61660943 .. 61662876
1934 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G035560.1

Sequence Viewer

Length: 1572 bp
ATGGTTATTTCCACAGAATTTGGGAACAAGCAAAGCCAGAACAAGCGCATTGTCGCATTCAGAAATACAGCATCTGCTCCTCTAAGGGTCAAATCAAGAAGGCTCAGGAACAGGCCAGGGAACAATGCACTCAAGATCACAGTTCAACATGTGAATGGCATGCTTAAAGCAAACGTTCCCGAAGCAGATATACTTACAGATCACGAAAGGGCTGTTTTTCAGGAAGAACAGATGATGGAGAAGCCATCACGTATCTCAGTCTTTCAACTCCTAGGGATGAACAATCCACCCCGCATCCCAATCTTGCAACGCTTGGGAACTCAAACGCAACCCCGTGTCTCAGGTTTCCAACGTTTCGGCAACACTTCTTCATTATCGTCCAACAAGTCACAAGTAAGCAAGAAATGGAAGGTTAAACGACACGCAAGGGTGATCTTCAAAAAGACAGTGGGTTCTAAGCCAGATAAAAACATGGAAGAATTAGTGTTAGTGAACTGTGTTTCGTTTGAAGAGGAACTAGATCAAGATCAGGCTCCAGAATTCATTGATACTGCCCAGACTACTCCCCCACAAATGGAAGATGGAGGACAAGCAACCATTGATGACCTCCAAGAGATCAACCTTGGGACAGCTAAAGACCCGAAGCCTGTATTTGTGAGTGCTCTATTGACGCCAGACGAATTAGAAGGCTACAAATCTCTTCTGCAGGAATATAAGGACGTCTTCGCCTGGGGCTATCAAGACATGCCAGGTTTAGATCCAAAAGTGGCAGTTCACAAGTTAGCAGTCTCGGATCAGAAACAGGTTAAATATCCCACATGGCTGGCAAGTATCGTCCCAGTGAAGAAGAAGAACGGACAGATCCGTATTTGCGTTGGCTATAGAGATCTCAACGACGCATGTCCAAAAGATGAGTTCCCGCTCCCAATTACAGAGTTACTGGTTAATGCTACAATGGGATATGGTGCCTTGTCCTTTATGGATGGTTTCTCTGGTTATAATCAGATCAAGATGGCACCCGAAGACGAAGAGCTAACAGCATTTCGTACACCAAAAGGGGTACCGAGGAATAGAATTGACCCCGCCAAAATCAAGGCAATCAGAGAAATGCCTCCTCCCAGAAATTTGCGAGAGCTAAGAGGGTTACAGGGCAGACTGGCTTACATAAGGAGGTTCATTTCAAACCTTTCTAGAAGATGCCAACCTTTCACAAGACTGATGAAGAAAGACATCCCATTTGTATGGGACCAACCTTGCCAAAATGCCTTTAACAGCATCAAGGAGTACCTCCTCAAACCTCCAGTATTAATGGCACCTATTAAAGGAAAACCTCTTATACTCTATATTGCGGCACTCGAGCGATCTCTGGGAGCATTGCTTGCACAAAACAATGACGAGGGGAAAGAAAATGCTCTGTATTATTTGAGCAGGACACTTGTGGGGGCAGAACACAACTACACCCCCATCGAAAAGGTTTGCCTTGCCTTGATCTTTGCCGCTCAGAAATTGAGACACTACATGCTCGCTCACAACTTTACTCTGATCTCCAAAGCCGATCCACTCAGTACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 Retrotrans_gag rve

Protein Analysis

523

Amino Acids

59.12

Weight (kDa)

9.5

Isoelectric Point (pI)

42.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_1 PF00078 281 - 352 2.2e-06 Reverse transcriptase (RNA-dependent DNA polymerase)
RT_RNaseH_2 PF17919 415 - 514 5.8e-25 RNase H-like domain found in reverse transcriptase
RT_RNaseH PF17917 443 - 521 2.9e-18 RNase H-like domain found in reverse transcriptase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000160)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g11612 FvH4_2g25851 FvH4_3g22802 FvH4_3g22805 FvH4_3g31361 FvH4_3g31382 FvH4_4g05272 FvH4_4g05273 FvH4_4g14567 FvH4_4g15161 FvH4_5g22540 FvH4_6g13113 FvH4_6g31923 FvH4_6g31924 FvH4_6g33651 FvH4_6g45122 FvH4_7g03662
pyrus_communis pycom01g04240 pycom01g24010 pycom02g18210 pycom02g19420 pycom05g06510 pycom09g15750 pycom09g18940 pycom12g02580 pycom12g03100 pycom12g08310 pycom13g22710 pycom13g28060 pycom16g18340 pycom16g18350 pycom16g24880 pycom16g26240 pycom461g00260 pycom520g00980 pycom520g01320
rosa_chinensis RchiOBHm_Chr1g0320731 RchiOBHm_Chr2g0102771 RchiOBHm_Chr3g0462151 RchiOBHm_Chr5g0038141 RchiOBHm_Chr5g0069371 RchiOBHm_Chr7g0239101
rosa_multiflora Rmu_co8038252.1_g000001 Rmu_co8138412.1_g000001 Rmu_co8331087.1_g000001 Rmu_co8479311.1_g000001 Rmu_sc0000112.1_g000018 Rmu_sc0000346.1_g000012 Rmu_sc0002102.1_g000002 Rmu_sc0003505.1_g000013 Rmu_sc0004249.1_g000007 Rmu_sc0004448.1_g000010 Rmu_sc0004594.1_g000011 Rmu_sc0004915.1_g000010 Rmu_sc0008019.1_g000019 Rmu_sc0008303.1_g000001 Rmu_sc0008355.1_g000005 Rmu_sc0009253.1_g000018 Rmu_sc0010211.1_g000002 Rmu_sc0010252.1_g000009 Rmu_sc0011534.1_g000008 Rmu_sc0014811.1_g000009 Rmu_sc0019475.1_g000001 Rmu_sc0024897.1_g000001 Rmu_sc0024898.1_g000001 Rmu_sc0031791.1_g000001 Rmu_sc0038715.1_g000001
rosa_roxburghii Rroxscaffold_165G00436940 Rroxscaffold_174G00435270 Rroxscaffold_177G00434330 Rroxscaffold_177G00434340 Rroxscaffold_177G00434350 Rroxscaffold_1G00002160 Rroxscaffold_1G00025260 Rroxscaffold_1G00042950 Rroxscaffold_1G00068010 Rroxscaffold_2G00107530 Rroxscaffold_3G00221190 Rroxscaffold_3G00221520 Rroxscaffold_3G00223200 Rroxscaffold_4G00322230 Rroxscaffold_4G00331810 Rroxscaffold_5G00385150 Rroxscaffold_5G00387510 Rroxscaffold_6G00410520 Rroxscaffold_6G00423360 Rroxscaffold_6G00423370 Rroxscaffold_6G00429210 Rroxscaffold_7G00158300 Rroxscaffold_7G00163480 Rroxscaffold_7G00171410 Rroxscaffold_7G00178940 Rroxscaffold_7G00199480 Rroxscaffold_7G00205630 Rroxscaffold_7G00207440
rosa_rugosa Rorug01G0056400 Rorug04G0063900 Rorug05G0251400 Rorug07G0221900
rosa_samantha Rh1DG169400 Rh2AG292900 Rh2DG519200 Rh4DG260600 Rh5AG042600 Rh6BG117500
rosa_wichuraiana Rw0G001900 Rw0G005150 Rw0G006380 Rw0G015140 Rw0G016320 Rw0G019440 Rw0G019840 Rw0G023740 Rw1G001590 Rw1G002180 Rw1G003560 Rw1G004280 Rw1G006110 Rw1G006680 Rw1G007920 Rw1G008480 Rw1G009120 Rw1G010310 Rw1G014900 Rw1G019650 Rw1G022070 Rw1G022170 Rw1G041570 Rw2G002740 Rw2G005760 Rw2G032370 Rw2G046770 Rw2G050600 Rw2G051420 Rw3G015930 Rw3G016280 Rw3G019580 Rw3G028420 Rw4G003430 Rw4G005350 Rw4G007530 Rw4G008150 Rw4G009580 Rw4G010250 Rw4G015800 Rw4G017000 Rw4G017910 Rw4G018510 Rw4G019700 Rw4G031010 Rw5G012650 Rw5G020140 Rw5G022060 Rw5G034420 Rw5G035560 Rw5G043010 Rw5G046750 Rw5G047340 Rw5G049500 Rw6G001390 Rw6G002210 Rw6G004530 Rw6G004770 Rw6G005100 Rw6G005890 Rw6G011860 Rw6G014680 Rw6G019480 Rw6G028970 Rw6G033800 Rw7G013050 Rw7G014800 Rw7G025760 Rw7G025850 Rw7G026730 Rw7G026870 Rw7G036330 Rw7G036430 Rw7G039320 Rw7G039510 Rw7G039560 Rw7G041370 Rw7G042050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 999
AatII GACGTC 1 cut(s) 723
Acc65I GGTACC 1 cut(s) 1060
AccB1I GGYRCC 4 cut(s) 965, 1015, 1060, 1312
AccBSI CCGCTC 2 cut(s) 922, 1499
AciI CCGC 5 cut(s) 292, 920, 1083, 1349, 1497
AclI AACGTT 2 cut(s) 174, 352
AclWI GGATC 4 cut(s) 752, 801, 856, 1550
AcsI RAATTY 3 cut(s) 17, 539, 1123
AcyI GRCGYC 2 cut(s) 671, 720
AfaI GTAC 4 cut(s) 1048, 1062, 1286, 1567
AfiI CCNNNNNNNGG 2 cut(s) 574, 1322
AflIII ACRYGT 1 cut(s) 148
AgsI TTSAA 5 cut(s) 146, 266, 439, 509, 1182
AjnI CCWGG 3 cut(s) 115, 728, 748
AluBI AGCT 3 cut(s) 632, 1033, 1135
AluI AGCT 3 cut(s) 632, 1033, 1135
Alw21I GWGCWC 1 cut(s) 664
Alw26I GTCTC 3 cut(s) 343, 793, 1504
AlwI GGATC 4 cut(s) 752, 801, 856, 1550
AlwNI CAGNNNCTG 1 cut(s) 74
Ama87I CYCGRG 1 cut(s) 1355
AoxI GGCC 1 cut(s) 113
ApoI RAATTY 3 cut(s) 17, 539, 1123
ArsI GACNNNNNNTTYG 2 cut(s) 1220, 1252
AseI ATTAAT 1 cut(s) 1307
Asp718I GGTACC 1 cut(s) 1060
AspA2I CCTAGG 1 cut(s) 271
AspLEI GCGC 1 cut(s) 48
AspS9I GGNCC 1 cut(s) 1246
AsuHPI GGTGA 1 cut(s) 442
AvaI CYCGRG 1 cut(s) 1355
AvaII GGWCC 1 cut(s) 1246
AvrII CCTAGG 1 cut(s) 271
BanI GGYRCC 4 cut(s) 965, 1015, 1060, 1312
BarI GAAGNNNNNNTAC 2 cut(s) 174, 206
BbsI GAAGAC 2 cut(s) 715, 1029
Bbv12I GWGCWC 1 cut(s) 664
BccI CCATC 6 cut(s) 229, 253, 575, 977, 1006, 1472
BciT130I CCWGG 3 cut(s) 117, 730, 750
BcoDI GTCTC 3 cut(s) 343, 793, 1504
BfaI CTAG 3 cut(s) 272, 518, 1191
BfmI CTRYAG 2 cut(s) 704, 880
BglII AGATCT 1 cut(s) 886
BisI GCNGC 2 cut(s) 1350, 1497
BlnI CCTAGG 1 cut(s) 271
BlsI GCNGC 2 cut(s) 1351, 1498
BmcAI AGTACT 1 cut(s) 1567
Bme1390I CCNGG 3 cut(s) 117, 730, 750
Bme18I GGWCC 1 cut(s) 1246
BmeT110I CYCGRG 1 cut(s) 1355
BmgT120I GGNCC 1 cut(s) 1246
BmiI GGNNCC 6 cut(s) 534, 967, 1017, 1062, 1247, 1314
BmrFI CCNGG 3 cut(s) 117, 730, 750
BmrI ACTGGG 1 cut(s) 833
BmsI GCATC 4 cut(s) 80, 303, 1187, 1284
BmuI ACTGGG 1 cut(s) 833
BoxI GACNNNNGTC 1 cut(s) 900
BpiI GAAGAC 2 cut(s) 715, 1029
BpmI CTGGAG 2 cut(s) 519, 1284
Bpu10I CCTNAGC 1 cut(s) 104
BpuEI CTTGAG 1 cut(s) 116
BsaAI YACGTR 1 cut(s) 251
BsaBI GATNNNNATC 1 cut(s) 525
BsaHI GRCGYC 2 cut(s) 671, 720
BsaJI CCNNGG 5 cut(s) 116, 271, 622, 729, 1064
Bsc4I CCNNNNNNNGG 2 cut(s) 574, 1322
Bse1I ACTGG 4 cut(s) 839, 945, 1161, 1301
Bse3DI GCAATG 1 cut(s) 1373
Bse8I GATNNNNATC 1 cut(s) 525
BseBI CCWGG 3 cut(s) 117, 730, 750
BseDI CCNNGG 5 cut(s) 116, 271, 622, 729, 1064
BseGI GGATG 4 cut(s) 282, 294, 988, 1230
BseJI GATNNNNATC 1 cut(s) 525
BseLI CCNNNNNNNGG 2 cut(s) 574, 1322
BseMI GCAATG 1 cut(s) 1373
BseMII CTCAG 4 cut(s) 118, 270, 354, 1514
BseNI ACTGG 4 cut(s) 839, 945, 1161, 1301
BseRI GAGGAG 3 cut(s) 69, 1104, 1280
BshFI GGCC 1 cut(s) 115
BshNI GGYRCC 4 cut(s) 965, 1015, 1060, 1312
BsiHKAI GWGCWC 1 cut(s) 664
BsiHKCI CYCGRG 1 cut(s) 1355
BslFI GGGAC 3 cut(s) 640, 821, 1259
BslI CCNNNNNNNGG 2 cut(s) 574, 1322
BsmAI GTCTC 3 cut(s) 343, 793, 1504
BsmFI GGGAC 3 cut(s) 640, 821, 1259
BsmI GAATGC 1 cut(s) 56
BsnI GGCC 1 cut(s) 115
BsoBI CYCGRG 1 cut(s) 1355
Bsp1286I GDGCHC 1 cut(s) 664
BspACI CCGC 5 cut(s) 292, 920, 1083, 1349, 1497
BspANI GGCC 1 cut(s) 115
BspCNI CTCAG 4 cut(s) 117, 269, 353, 1513
BspLI GGNNCC 6 cut(s) 534, 967, 1017, 1062, 1247, 1314
BspMAI CTGCAG 1 cut(s) 708
BspPI GGATC 4 cut(s) 752, 801, 856, 1550
BspQI GCTCTTC 1 cut(s) 1023
BspT107I GGYRCC 4 cut(s) 965, 1015, 1060, 1312
BsrBI CCGCTC 2 cut(s) 922, 1499
BsrDI GCAATG 1 cut(s) 1373
BsrI ACTGG 4 cut(s) 839, 945, 1161, 1301
BssECI CCNNGG 5 cut(s) 116, 271, 622, 729, 1064
BssNI GRCGYC 2 cut(s) 671, 720
BssT1I CCWWGG 2 cut(s) 271, 622
Bst2UI CCWGG 3 cut(s) 117, 730, 750
Bst4CI ACNGT 3 cut(s) 142, 448, 497
Bst6I CTCTTC 3 cut(s) 504, 705, 1023
BstACI GRCGYC 2 cut(s) 671, 720
BstAPI GCANNNNNTGC 1 cut(s) 1379
BstBAI YACGTR 1 cut(s) 251
BstC8I GCNNGC 4 cut(s) 161, 825, 1380, 1524
BstDEI CTNAG 8 cut(s) 83, 104, 256, 340, 456, 1136, 1500, 1562
BstENI CCTNNNNNAGG 1 cut(s) 1320
BstF5I GGATG 4 cut(s) 282, 294, 988, 1230
BstHHI GCGC 1 cut(s) 48
BstMAI GTCTC 3 cut(s) 343, 793, 1504
BstMWI GCNNNNNNNGC 1 cut(s) 1379
BstNI CCWGG 3 cut(s) 117, 730, 750
BstNSI RCATGY 5 cut(s) 152, 163, 748, 903, 1522
BstPAI GACNNNNGTC 1 cut(s) 900
BstSCI CCNGG 3 cut(s) 115, 728, 748
BstSFI CTRYAG 2 cut(s) 704, 880
BstV2I GAAGAC 2 cut(s) 715, 1029
BstX2I RGATCY 3 cut(s) 757, 861, 886
BstXI CCANNNNNNTGG 2 cut(s) 823, 1242
BstYI RGATCY 3 cut(s) 757, 861, 886
BsuRI GGCC 1 cut(s) 115
BtsCI GGATG 4 cut(s) 282, 294, 988, 1230
BtsIMutI CAGTG 2 cut(s) 453, 846
Cac8I GCNNGC 4 cut(s) 161, 825, 1380, 1524
CaiI CAGNNNCTG 1 cut(s) 74
CfoI GCGC 1 cut(s) 48
Cfr13I GGNCC 1 cut(s) 1246
CseI GACGC 2 cut(s) 679, 905
Csp6I GTAC 4 cut(s) 1047, 1061, 1285, 1566
CspCI CAANNNNNGTGG 1 cut(s) 36
CviAII CATG 7 cut(s) 149, 160, 472, 745, 819, 900, 1519
CviQI GTAC 4 cut(s) 1047, 1061, 1285, 1566
DdeI CTNAG 8 cut(s) 83, 104, 256, 340, 456, 1136, 1500, 1562
Eam1104I CTCTTC 3 cut(s) 504, 705, 1023
EarI CTCTTC 3 cut(s) 504, 705, 1023
Eco130I CCWWGG 2 cut(s) 271, 622
Eco47I GGWCC 1 cut(s) 1246
Eco88I CYCGRG 1 cut(s) 1355
EcoNI CCTNNNNNAGG 1 cut(s) 1320
EcoRI GAATTC 1 cut(s) 539
EcoRII CCWGG 3 cut(s) 115, 728, 748
EcoT14I CCWWGG 2 cut(s) 271, 622
ErhI CCWWGG 2 cut(s) 271, 622
FaeI CATG 7 cut(s) 152, 163, 475, 748, 822, 903, 1522
FalI AAGNNNNNCTT 2 cut(s) 707, 739
FaqI GGGAC 3 cut(s) 640, 821, 1259
FatI CATG 7 cut(s) 148, 159, 471, 744, 818, 899, 1518
FauI CCCGC 3 cut(s) 299, 927, 1090
Fnu4HI GCNGC 2 cut(s) 1350, 1497
FokI GGATG 4 cut(s) 281, 289, 995, 1217
Fsp4HI GCNGC 2 cut(s) 1350, 1497
FspBI CTAG 3 cut(s) 272, 518, 1191
GlaI GCGC 1 cut(s) 47
GluI GCNGC 2 cut(s) 1350, 1497
GsuI CTGGAG 2 cut(s) 519, 1284
HaeIII GGCC 1 cut(s) 115
HgaI GACGC 2 cut(s) 679, 905
HhaI GCGC 1 cut(s) 48
Hin1I GRCGYC 2 cut(s) 671, 720
Hin1II CATG 7 cut(s) 152, 163, 475, 748, 822, 903, 1522
Hin6I GCGC 1 cut(s) 46
HinP1I GCGC 1 cut(s) 46
HphI GGTGA 1 cut(s) 442
Hpy166II GTNNAC 3 cut(s) 493, 775, 1049
Hpy188I TCNGA 7 cut(s) 62, 793, 798, 1005, 1103, 1503, 1542
Hpy8I GTNNAC 3 cut(s) 493, 775, 1049
Hpy99I CGWCG 1 cut(s) 899
HpyAV CCTTC 3 cut(s) 93, 403, 680
HpyCH4III ACNGT 3 cut(s) 142, 448, 497
HpyCH4IV ACGT 4 cut(s) 174, 250, 352, 720
HpyCH4V TGCA 4 cut(s) 128, 307, 706, 1382
HpyF10VI GCNNNNNNNGC 1 cut(s) 1379
HpyF3I CTNAG 8 cut(s) 83, 104, 256, 340, 456, 1136, 1500, 1562
HpySE526I ACGT 4 cut(s) 174, 250, 352, 720
Hsp92I GRCGYC 2 cut(s) 671, 720
Hsp92II CATG 7 cut(s) 152, 163, 475, 748, 822, 903, 1522
HspAI GCGC 1 cut(s) 46
KpnI GGTACC 1 cut(s) 1064
LguI GCTCTTC 1 cut(s) 1023
LmnI GCTCC 4 cut(s) 82, 538, 927, 1370
LweI GCATC 4 cut(s) 80, 303, 1187, 1284
MaeI CTAG 3 cut(s) 272, 518, 1191
MaeII ACGT 4 cut(s) 174, 250, 352, 720
MaeIII GTNAC 3 cut(s) 387, 936, 1143
MbiI CCGCTC 2 cut(s) 922, 1499
MflI RGATCY 3 cut(s) 757, 861, 886
MhlI GDGCHC 1 cut(s) 664
MluCI AATT 8 cut(s) 17, 479, 539, 680, 927, 1074, 1123, 1505
MmeI TCCRAC 2 cut(s) 373, 405
MseI TTAA 8 cut(s) 165, 414, 807, 945, 1269, 1307, 1320, 1570
MslI CAYNNNNRTG 2 cut(s) 153, 1240
MspR9I CCNGG 3 cut(s) 117, 730, 750
Mva1269I GAATGC 1 cut(s) 56
MvaI CCWGG 3 cut(s) 117, 730, 750
MwoI GCNNNNNNNGC 1 cut(s) 1379
NlaIII CATG 7 cut(s) 152, 163, 475, 748, 822, 903, 1522
NlaIV GGNNCC 6 cut(s) 534, 967, 1017, 1062, 1247, 1314
NmuCI GTSAC 1 cut(s) 387
NspI RCATGY 5 cut(s) 152, 163, 748, 903, 1522
PaeI GCATGC 1 cut(s) 163
PaeR7I CTCGAG 1 cut(s) 1355
PciI ACATGT 1 cut(s) 148
PciSI GCTCTTC 1 cut(s) 1023
PctI GAATGC 1 cut(s) 56
PkrI GCNGC 2 cut(s) 1351, 1498
Ppu21I YACGTR 1 cut(s) 251
PscI ACATGT 1 cut(s) 148
PshAI GACNNNNGTC 1 cut(s) 900
PshBI ATTAAT 1 cut(s) 1307
PsiI TTATAA 1 cut(s) 999
Psp1406I AACGTT 2 cut(s) 174, 352
Psp6I CCWGG 3 cut(s) 115, 728, 748
PspGI CCWGG 3 cut(s) 115, 728, 748
PspN4I GGNNCC 6 cut(s) 534, 967, 1017, 1062, 1247, 1314
PspPI GGNCC 1 cut(s) 1246
PspXI VCTCGAGB 1 cut(s) 1355
PstI CTGCAG 1 cut(s) 708
PstNI CAGNNNCTG 1 cut(s) 74
PsuI RGATCY 3 cut(s) 757, 861, 886
RsaI GTAC 4 cut(s) 1048, 1062, 1286, 1567
RsaNI GTAC 4 cut(s) 1047, 1061, 1285, 1566
RseI CAYNNNNRTG 2 cut(s) 153, 1240
SapI GCTCTTC 1 cut(s) 1023
SaqAI TTAA 8 cut(s) 165, 414, 807, 945, 1269, 1307, 1320, 1570
SatI GCNGC 2 cut(s) 1350, 1497
Sau96I GGNCC 1 cut(s) 1246
ScaI AGTACT 1 cut(s) 1567
ScrFI CCNGG 3 cut(s) 117, 730, 750
SduI GDGCHC 1 cut(s) 664
SfaNI GCATC 4 cut(s) 80, 303, 1187, 1284
SfcI CTRYAG 2 cut(s) 704, 880
Sfr274I CTCGAG 1 cut(s) 1355
SinI GGWCC 1 cut(s) 1246
SlaI CTCGAG 1 cut(s) 1355
SmiMI CAYNNNNRTG 2 cut(s) 153, 1240
SmlI CTYRAG 2 cut(s) 131, 1355
SmoI CTYRAG 2 cut(s) 131, 1355
SphI GCATGC 1 cut(s) 163
Sse9I AATT 8 cut(s) 17, 479, 539, 680, 927, 1074, 1123, 1505
SsiI CCGC 5 cut(s) 292, 920, 1083, 1349, 1497
SspMI CTAG 3 cut(s) 272, 518, 1191
StyD4I CCNGG 3 cut(s) 115, 728, 748
StyI CCWWGG 2 cut(s) 271, 622
TaaI ACNGT 3 cut(s) 142, 448, 497
TaiI ACGT 4 cut(s) 177, 253, 355, 723
TaqI TCGA 2 cut(s) 1356, 1467
TasI AATT 8 cut(s) 17, 479, 539, 680, 927, 1074, 1123, 1505
TatI WGTACW 1 cut(s) 1565
TauI GCSGC 2 cut(s) 1352, 1499
Tru1I TTAA 8 cut(s) 165, 414, 807, 945, 1269, 1307, 1320, 1570
Tru9I TTAA 8 cut(s) 165, 414, 807, 945, 1269, 1307, 1320, 1570
TscAI CASTG 2 cut(s) 453, 846
TseFI GTSAC 1 cut(s) 387
Tsp45I GTSAC 1 cut(s) 387
TspDTI ATGAA 5 cut(s) 293, 360, 532, 1165, 1235
TspGWI ACGGA 2 cut(s) 854, 870
TspRI CASTG 2 cut(s) 453, 846
VpaK11BI GGWCC 1 cut(s) 1246
VspI ATTAAT 1 cut(s) 1307
XagI CCTNNNNNAGG 1 cut(s) 1320
XapI RAATTY 3 cut(s) 17, 539, 1123
XbaI TCTAGA 1 cut(s) 1190
XceI RCATGY 5 cut(s) 152, 163, 748, 903, 1522
XhoI CTCGAG 1 cut(s) 1355
XmaJI CCTAGG 1 cut(s) 271
XspI CTAG 3 cut(s) 272, 518, 1191
ZraI GACGTC 1 cut(s) 721
ZrmI AGTACT 1 cut(s) 1567
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.