Rw4G018510

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000160
Physical Location & Seq
Forward (+)
41108984 .. 41111144
2161 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G018510.1

Sequence Viewer

Length: 1641 bp
ATGGAAAAGCTGTGTCTAACCCTGTATTTTTCAGGGTGTAAATTGCGACACTACATGTTATCCTTTACTACTTGCATCATCGCTCAGACCGATCTGGTCAAATATATGTTGTCCCGGCCTATCTTGCGAGGCCGCATTGGAAAATGGGTATTGGCTCTTTCAGAGTTCTCGCTCCAGTATGTACCCCAGAAGGCGGTCAAAGGGCAGGCTATCGCAGATTTTCTAGCGCATCATCCCCCGCTAGAGCTACCCGTGCTGAAAGAGTTGGAAATTGCTTGCAACACCGCGACTCTTCCAGATAAAGCATGCATCCCAGAATACGCGGTCTGGTATCAGGCTACAATCTCTTTACAGCCTTGGGTGTTATTCTTTGATGGCTCAAGAACGGACGCTATGGCTGGCGCGGGGATTGTTTTGGAAAATCCGGCAGGTGATCGGTTCTCTTATTCTTTCCAGCTCAATTTCCAATGTACTAATAATCAGGCTGAGTATGAAGCTCTTATCATTGGACTCGAAGTCTTGCTGGAAATGGGCGTCCGGGACGTTCAGATTCGCGGCGACTCTCAGCTCGTTATCAATCAACTCCTGGAGAAATATCGCTGTACGAGTTGGCTGCTCATTCTATACTTGAATCGCGCCATTGAGCTTTTGGACCAGTTTACAGACGTCGACATGGAACACATACCACGTGAGCGTAACTTTGCTGCTAATGAGCTAGCTCAATTGGCTACAGGCATTACCTTGAAGTATGGAGTGCGCGAGCGCATTCTGAAAGTTGAGCGTCGCACACTACCTTCGTGGCTTGCTCGACCTGATCCCCCAGATGACCCCATGGTCGCGGTACTGGAGCCCATTGATGTTGATTGGCGGATCCCTCTGATTGAATACCTCAAACGACCAGACTCCAGCGCTGATAGGAAGATTCGTTTCCTCGCATTGAATTACTTCCTTAGAGGTGACGAGCTGCGCAGGCGTGGAGAAGATGGTATAGACTTTCGATGTGTCTACGGTCGCGAAGCTAAGAGATTGATGCGCGAGGTGCACACGGGAATATGCGGATCTCATCAGGCTGGACCTAAGATGCGTTGGCTCATCCGACGTCATGGTTATTATTGGCCCAGCATTTTGAAGGATTGTATTGCATTCGCCAAAGGCTGTGCGGACTGTCAAGCACACGGTCCTGTCCAGCATGTTCCTAACATCCCTATGCAACCCATTATTAAACCCTGGCCTGCGCGAGGCTGGGCACTGGACTTGATTGGGATGATCCATCCTCATTCTTCCCTACAGCACAAGTTTATCATCGTCGCCACTGATTATTTCACGAAGTGGGTTGAAGCGGAGCCTCTGAAGGAGGCCTCCGGTGCTACCATTCGCCAGTTTATTTTCCGTAGTATTCTTTGCAGGTTTGGTATCCCTGAAGTGCTGGTAACCGGTCGTGGAAAGTGGACGCCGCGATGGGAGGGGCCTTTTGTTATCCACCGCATACTGGAGCGCGGTGCTTTTCACCTCAAAGACGTCGACGGTGATATCCATCGCAACCCCATTAACGGTCGTTTTCTGAAGAAATACTATCCAAGTGTCTGGGAGTTCGATGATCCTCCAGACCCTGTTCTTGCTCCGGCTGGGGGGCAACCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

546

Amino Acids

62.57

Weight (kDa)

8.45

Isoelectric Point (pI)

36.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RNase_H PF00075 121 - 198 3.8e-06 RNase H
RVT_3 PF13456 124 - 242 4.2e-21 Reverse transcriptase-like
Integrase_H2C2 PF17921 339 - 392 7.8e-08 Integrase zinc binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000160)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g11612 FvH4_2g25851 FvH4_3g22802 FvH4_3g22805 FvH4_3g31361 FvH4_3g31382 FvH4_4g05272 FvH4_4g05273 FvH4_4g14567 FvH4_4g15161 FvH4_5g22540 FvH4_6g13113 FvH4_6g31923 FvH4_6g31924 FvH4_6g33651 FvH4_6g45122 FvH4_7g03662
pyrus_communis pycom01g04240 pycom01g24010 pycom02g18210 pycom02g19420 pycom05g06510 pycom09g15750 pycom09g18940 pycom12g02580 pycom12g03100 pycom12g08310 pycom13g22710 pycom13g28060 pycom16g18340 pycom16g18350 pycom16g24880 pycom16g26240 pycom461g00260 pycom520g00980 pycom520g01320
rosa_chinensis RchiOBHm_Chr1g0320731 RchiOBHm_Chr2g0102771 RchiOBHm_Chr3g0462151 RchiOBHm_Chr5g0038141 RchiOBHm_Chr5g0069371 RchiOBHm_Chr7g0239101
rosa_multiflora Rmu_co8038252.1_g000001 Rmu_co8138412.1_g000001 Rmu_co8331087.1_g000001 Rmu_co8479311.1_g000001 Rmu_sc0000112.1_g000018 Rmu_sc0000346.1_g000012 Rmu_sc0002102.1_g000002 Rmu_sc0003505.1_g000013 Rmu_sc0004249.1_g000007 Rmu_sc0004448.1_g000010 Rmu_sc0004594.1_g000011 Rmu_sc0004915.1_g000010 Rmu_sc0008019.1_g000019 Rmu_sc0008303.1_g000001 Rmu_sc0008355.1_g000005 Rmu_sc0009253.1_g000018 Rmu_sc0010211.1_g000002 Rmu_sc0010252.1_g000009 Rmu_sc0011534.1_g000008 Rmu_sc0014811.1_g000009 Rmu_sc0019475.1_g000001 Rmu_sc0024897.1_g000001 Rmu_sc0024898.1_g000001 Rmu_sc0031791.1_g000001 Rmu_sc0038715.1_g000001
rosa_roxburghii Rroxscaffold_165G00436940 Rroxscaffold_174G00435270 Rroxscaffold_177G00434330 Rroxscaffold_177G00434340 Rroxscaffold_177G00434350 Rroxscaffold_1G00002160 Rroxscaffold_1G00025260 Rroxscaffold_1G00042950 Rroxscaffold_1G00068010 Rroxscaffold_2G00107530 Rroxscaffold_3G00221190 Rroxscaffold_3G00221520 Rroxscaffold_3G00223200 Rroxscaffold_4G00322230 Rroxscaffold_4G00331810 Rroxscaffold_5G00385150 Rroxscaffold_5G00387510 Rroxscaffold_6G00410520 Rroxscaffold_6G00423360 Rroxscaffold_6G00423370 Rroxscaffold_6G00429210 Rroxscaffold_7G00158300 Rroxscaffold_7G00163480 Rroxscaffold_7G00171410 Rroxscaffold_7G00178940 Rroxscaffold_7G00199480 Rroxscaffold_7G00205630 Rroxscaffold_7G00207440
rosa_rugosa Rorug01G0056400 Rorug04G0063900 Rorug05G0251400 Rorug07G0221900
rosa_samantha Rh1DG169400 Rh2AG292900 Rh2DG519200 Rh4DG260600 Rh5AG042600 Rh6BG117500
rosa_wichuraiana Rw0G001900 Rw0G005150 Rw0G006380 Rw0G015140 Rw0G016320 Rw0G019440 Rw0G019840 Rw0G023740 Rw1G001590 Rw1G002180 Rw1G003560 Rw1G004280 Rw1G006110 Rw1G006680 Rw1G007920 Rw1G008480 Rw1G009120 Rw1G010310 Rw1G014900 Rw1G019650 Rw1G022070 Rw1G022170 Rw1G041570 Rw2G002740 Rw2G005760 Rw2G032370 Rw2G046770 Rw2G050600 Rw2G051420 Rw3G015930 Rw3G016280 Rw3G019580 Rw3G028420 Rw4G003430 Rw4G005350 Rw4G007530 Rw4G008150 Rw4G009580 Rw4G010250 Rw4G015800 Rw4G017000 Rw4G017910 Rw4G018510 Rw4G019700 Rw4G031010 Rw5G012650 Rw5G020140 Rw5G022060 Rw5G034420 Rw5G035560 Rw5G043010 Rw5G046750 Rw5G047340 Rw5G049500 Rw6G001390 Rw6G002210 Rw6G004530 Rw6G004770 Rw6G005100 Rw6G005890 Rw6G011860 Rw6G014680 Rw6G019480 Rw6G028970 Rw6G033800 Rw7G013050 Rw7G014800 Rw7G025760 Rw7G025850 Rw7G026730 Rw7G026870 Rw7G036330 Rw7G036430 Rw7G039320 Rw7G039510 Rw7G039560 Rw7G041370 Rw7G042050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 419
AasI GACNNNNNNGTC 1 cut(s) 833
AatII GACGTC 3 cut(s) 669, 1102, 1521
Acc16I TGCGCA 1 cut(s) 968
Acc36I ACCTGC 2 cut(s) 419, 1395
AccI GTMKAC 3 cut(s) 669, 1005, 1521
AclWI GGATC 6 cut(s) 809, 865, 878, 1066, 1261, 1592
AcuI CTGAAG 3 cut(s) 1370, 1440, 1583
AcvI CACGTG 1 cut(s) 689
AcyI GRCGYC 5 cut(s) 534, 666, 1099, 1451, 1518
AdeI CACNNNGTG 1 cut(s) 1329
AfaI GTAC 4 cut(s) 183, 472, 604, 843
AfeI AGCGCT 1 cut(s) 910
AfiI CCNNNNNNNGG 5 cut(s) 193, 1238, 1489, 1550, 1628
AflIII ACRYGT 1 cut(s) 54
AgeI ACCGGT 1 cut(s) 1433
AgsI TTSAA 6 cut(s) 631, 745, 884, 940, 1129, 1337
AhdI GACNNNNNGTC 1 cut(s) 515
AjnI CCWGG 2 cut(s) 585, 1226
Alw21I GWGCWC 1 cut(s) 1044
Alw44I GTGCAC 1 cut(s) 1040
AlwI GGATC 6 cut(s) 809, 865, 878, 1066, 1261, 1592
AlwNI CAGNNNCTG 1 cut(s) 1610
Aor51HI AGCGCT 1 cut(s) 910
AoxI GGCC 6 cut(s) 116, 130, 1115, 1229, 1356, 1466
ApaLI GTGCAC 1 cut(s) 1040
ApeKI GCWGC 3 cut(s) 613, 704, 964
AsiGI ACCGGT 1 cut(s) 1433
Asp700I GAANNNNTTC 1 cut(s) 944
AspS9I GGNCC 5 cut(s) 652, 1073, 1116, 1178, 1466
AsuC2I CCSGG 2 cut(s) 115, 539
AsuHPI GGTGA 4 cut(s) 443, 968, 1499, 1538
AsuNHI GCTAGC 1 cut(s) 715
AvaII GGWCC 3 cut(s) 652, 1073, 1178
BaeGI GKGCMC 2 cut(s) 1044, 1249
BamHI GGATCC 1 cut(s) 870
BanII GRGCYC 1 cut(s) 852
BbrPI CACGTG 1 cut(s) 689
Bbv12I GWGCWC 1 cut(s) 1044
BbvI GCAGC 3 cut(s) 600, 691, 951
BccI CCATC 5 cut(s) 368, 977, 1278, 1452, 1542
BcgI CGANNNNNNTGC 2 cut(s) 595, 629
BciT130I CCWGG 2 cut(s) 587, 1228
BciVI GTATCC 1 cut(s) 1424
BcnI CCSGG 2 cut(s) 115, 539
BfaI CTAG 3 cut(s) 224, 242, 716
BfmI CTRYAG 2 cut(s) 729, 1286
BfoI RGCGCY 1 cut(s) 912
BfuAI ACCTGC 2 cut(s) 419, 1395
BfuI GTATCC 1 cut(s) 1424
BisI GCNGC 6 cut(s) 133, 556, 614, 705, 965, 1454
BlsI GCNGC 6 cut(s) 134, 557, 615, 706, 966, 1455
Bme1390I CCNGG 4 cut(s) 115, 539, 587, 1228
Bme18I GGWCC 3 cut(s) 652, 1073, 1178
BmeRI GACNNNNNGTC 1 cut(s) 515
BmgT120I GGNCC 5 cut(s) 652, 1073, 1116, 1178, 1466
BmiI GGNNCC 4 cut(s) 849, 872, 1344, 1467
BmrFI CCNGG 4 cut(s) 115, 539, 587, 1228
BmsI GCATC 5 cut(s) 84, 238, 318, 1020, 1071
BmtI GCTAGC 1 cut(s) 719
BpmI CTGGAG 6 cut(s) 158, 608, 866, 889, 1511, 1587
BpuEI CTTGAG 1 cut(s) 364
BpuMI CCSGG 2 cut(s) 115, 539
BsaAI YACGTR 1 cut(s) 689
BsaBI GATNNNNATC 1 cut(s) 1533
BsaHI GRCGYC 5 cut(s) 534, 666, 1099, 1451, 1518
BsaJI CCNNGG 3 cut(s) 356, 831, 1226
BsaWI WCCGGW 2 cut(s) 1361, 1433
Bsc4I CCNNNNNNNGG 5 cut(s) 193, 1238, 1489, 1550, 1628
Bse118I RCCGGY 1 cut(s) 1433
Bse1I ACTGG 6 cut(s) 175, 655, 849, 1254, 1378, 1494
Bse8I GATNNNNATC 1 cut(s) 1533
BseBI CCWGG 2 cut(s) 587, 1228
BseDI CCNNGG 3 cut(s) 356, 831, 1226
BseGI GGATG 6 cut(s) 232, 309, 1092, 1200, 1269, 1270
BseJI GATNNNNATC 1 cut(s) 1533
BseLI CCNNNNNNNGG 5 cut(s) 193, 1238, 1489, 1550, 1628
BseMII CTCAG 3 cut(s) 98, 477, 578
BseNI ACTGG 6 cut(s) 175, 655, 849, 1254, 1378, 1494
BseSI GKGCMC 2 cut(s) 1044, 1249
BseXI GCAGC 3 cut(s) 600, 691, 951
BseYI CCCAGC 3 cut(s) 1118, 1242, 1625
Bsh1285I CGRYCG 3 cut(s) 1012, 1438, 1555
BshFI GGCC 6 cut(s) 118, 132, 1117, 1231, 1358, 1468
BshTI ACCGGT 1 cut(s) 1433
BsiEI CGRYCG 3 cut(s) 1012, 1438, 1555
BsiHKAI GWGCWC 1 cut(s) 1044
BsiSI CCGG 6 cut(s) 115, 425, 538, 1362, 1434, 1622
BslFI GGGAC 2 cut(s) 97, 554
BslI CCNNNNNNNGG 5 cut(s) 193, 1238, 1489, 1550, 1628
BsmFI GGGAC 2 cut(s) 97, 554
BsmI GAATGC 2 cut(s) 765, 1142
BsnI GGCC 6 cut(s) 118, 132, 1117, 1231, 1358, 1468
Bsp1286I GDGCHC 3 cut(s) 852, 1044, 1249
Bsp143I GATC 7 cut(s) 91, 433, 814, 870, 1058, 1266, 1597
Bsp19I CCATGG 1 cut(s) 831
Bsp68I TCGCGA 1 cut(s) 1014
BspANI GGCC 6 cut(s) 118, 132, 1117, 1231, 1358, 1468
BspCNI CTCAG 3 cut(s) 97, 478, 577
BspLI GGNNCC 4 cut(s) 849, 872, 1344, 1467
BspMI ACCTGC 2 cut(s) 419, 1395
BspOI GCTAGC 1 cut(s) 719
BspPI GGATC 6 cut(s) 809, 865, 878, 1066, 1261, 1592
BsrFI RCCGGY 1 cut(s) 1433
BsrI ACTGG 6 cut(s) 175, 655, 849, 1254, 1378, 1494
BssAI RCCGGY 1 cut(s) 1433
BssECI CCNNGG 3 cut(s) 356, 831, 1226
BssMI GATC 7 cut(s) 91, 433, 814, 870, 1058, 1266, 1597
BssNI GRCGYC 5 cut(s) 534, 666, 1099, 1451, 1518
BssT1I CCWWGG 2 cut(s) 356, 831
Bst2UI CCWGG 2 cut(s) 587, 1228
Bst4CI ACNGT 5 cut(s) 1010, 1166, 1178, 1526, 1553
Bst6I CTCTTC 1 cut(s) 297
BstACI GRCGYC 5 cut(s) 534, 666, 1099, 1451, 1518
BstBAI YACGTR 1 cut(s) 689
BstC8I GCNNGC 9 cut(s) 207, 277, 307, 400, 717, 761, 804, 971, 1233
BstDEI CTNAG 6 cut(s) 84, 486, 564, 950, 1020, 1077
BstDSI CCRYGG 1 cut(s) 831
BstEII GGTNACC 1 cut(s) 1429
BstENI CCTNNNNNAGG 1 cut(s) 1236
BstF5I GGATG 6 cut(s) 232, 309, 1092, 1200, 1269, 1270
BstH2I RGCGCY 1 cut(s) 912
BstKTI GATC 7 cut(s) 94, 436, 817, 873, 1061, 1269, 1600
BstMBI GATC 7 cut(s) 91, 433, 814, 870, 1058, 1266, 1597
BstMCI CGRYCG 3 cut(s) 1012, 1438, 1555
BstMWI GCNNNNNNNGC 6 cut(s) 124, 253, 725, 970, 1039, 1364
BstNI CCWGG 2 cut(s) 587, 1228
BstNSI RCATGY 3 cut(s) 58, 309, 1193
BstPI GGTNACC 1 cut(s) 1429
BstSCI CCNGG 4 cut(s) 113, 537, 585, 1226
BstSFI CTRYAG 2 cut(s) 729, 1286
BstSLI GKGCMC 2 cut(s) 1044, 1249
BstV1I GCAGC 3 cut(s) 600, 691, 951
BstX2I RGATCY 2 cut(s) 870, 1058
BstXI CCANNNNNNTGG 1 cut(s) 1584
BstYI RGATCY 2 cut(s) 870, 1058
BsuI GTATCC 1 cut(s) 1424
BsuRI GGCC 6 cut(s) 118, 132, 1117, 1231, 1358, 1468
BtgI CCRYGG 1 cut(s) 831
BtgZI GCGATG 3 cut(s) 64, 1471, 1520
BtsCI GGATG 6 cut(s) 232, 309, 1092, 1200, 1269, 1270
BtsIMutI CAGTG 2 cut(s) 1247, 1311
BtuMI TCGCGA 1 cut(s) 1014
BveI ACCTGC 2 cut(s) 419, 1395
Cac8I GCNNGC 9 cut(s) 207, 277, 307, 400, 717, 761, 804, 971, 1233
CaiI CAGNNNCTG 1 cut(s) 1610
Cfr10I RCCGGY 1 cut(s) 1433
Cfr13I GGNCC 5 cut(s) 652, 1073, 1116, 1178, 1466
CseI GACGC 4 cut(s) 398, 523, 770, 1459
Csp6I GTAC 4 cut(s) 182, 471, 603, 842
CspAI ACCGGT 1 cut(s) 1433
CviAII CATG 6 cut(s) 55, 306, 673, 832, 1103, 1190
CviQI GTAC 4 cut(s) 182, 471, 603, 842
DdeI CTNAG 6 cut(s) 84, 486, 564, 950, 1020, 1077
DpnI GATC 7 cut(s) 93, 435, 816, 872, 1060, 1268, 1599
DpnII GATC 7 cut(s) 91, 433, 814, 870, 1058, 1266, 1597
DraIII CACNNNGTG 1 cut(s) 1329
DrdI GACNNNNNNGTC 1 cut(s) 833
DriI GACNNNNNGTC 1 cut(s) 515
DseDI GACNNNNNNGTC 1 cut(s) 833
Eam1104I CTCTTC 1 cut(s) 297
Eam1105I GACNNNNNGTC 1 cut(s) 515
EarI CTCTTC 1 cut(s) 297
EciI GGCGGA 1 cut(s) 883
Eco130I CCWWGG 2 cut(s) 356, 831
Eco147I AGGCCT 1 cut(s) 1358
Eco24I GRGCYC 1 cut(s) 852
Eco32I GATATC 1 cut(s) 1531
Eco47I GGWCC 3 cut(s) 652, 1073, 1178
Eco47III AGCGCT 1 cut(s) 910
Eco57I CTGAAG 3 cut(s) 1370, 1440, 1583
Eco72I CACGTG 1 cut(s) 689
Eco91I GGTNACC 1 cut(s) 1429
EcoNI CCTNNNNNAGG 1 cut(s) 1236
EcoO109I RGGNCCY 1 cut(s) 1466
EcoO65I GGTNACC 1 cut(s) 1429
EcoRII CCWGG 2 cut(s) 585, 1226
EcoRV GATATC 1 cut(s) 1531
EcoT14I CCWWGG 2 cut(s) 356, 831
EcoT22I ATGCAT 1 cut(s) 311
EcoT38I GRGCYC 1 cut(s) 852
ErhI CCWWGG 2 cut(s) 356, 831
FaeI CATG 6 cut(s) 58, 309, 676, 835, 1106, 1193
FaqI GGGAC 2 cut(s) 97, 554
FatI CATG 6 cut(s) 54, 305, 672, 831, 1102, 1189
FauI CCCGC 2 cut(s) 246, 397
FblI GTMKAC 3 cut(s) 669, 1005, 1521
Fnu4HI GCNGC 6 cut(s) 133, 556, 614, 705, 965, 1454
FokI GGATG 6 cut(s) 219, 296, 1079, 1187, 1257, 1276
FriOI GRGCYC 1 cut(s) 852
Fsp4HI GCNGC 6 cut(s) 133, 556, 614, 705, 965, 1454
FspBI CTAG 3 cut(s) 224, 242, 716
FspI TGCGCA 1 cut(s) 968
GluI GCNGC 6 cut(s) 133, 556, 614, 705, 965, 1454
GsaI CCCAGC 3 cut(s) 1122, 1246, 1629
GsuI CTGGAG 6 cut(s) 158, 608, 866, 889, 1511, 1587
HaeII RGCGCY 1 cut(s) 912
HaeIII GGCC 6 cut(s) 118, 132, 1117, 1231, 1358, 1468
HapII CCGG 6 cut(s) 115, 425, 538, 1362, 1434, 1622
HgaI GACGC 4 cut(s) 398, 523, 770, 1459
Hin1I GRCGYC 5 cut(s) 534, 666, 1099, 1451, 1518
Hin1II CATG 6 cut(s) 58, 309, 676, 835, 1106, 1193
HincII GTYRAC 2 cut(s) 670, 1522
HindII GTYRAC 2 cut(s) 670, 1522
HinfI GANTC 7 cut(s) 289, 510, 550, 560, 631, 902, 922
HpaII CCGG 6 cut(s) 115, 425, 538, 1362, 1434, 1622
HphI GGTGA 4 cut(s) 443, 968, 1499, 1538
Hpy166II GTNNAC 6 cut(s) 660, 670, 1006, 1042, 1449, 1522
Hpy188I TCNGA 8 cut(s) 87, 163, 549, 771, 879, 1097, 1350, 1563
Hpy188III TCNNGA 5 cut(s) 296, 381, 1013, 1324, 1604
Hpy8I GTNNAC 6 cut(s) 660, 670, 1006, 1042, 1449, 1522
Hpy99I CGWCG 6 cut(s) 671, 786, 1101, 1310, 1523, 1526
HpyAV CCTTC 4 cut(s) 184, 804, 1123, 1345
HpyCH4III ACNGT 5 cut(s) 1010, 1166, 1178, 1526, 1553
HpyCH4IV ACGT 5 cut(s) 543, 666, 688, 1099, 1518
HpyCH4V TGCA 7 cut(s) 75, 279, 309, 1042, 1142, 1210, 1404
HpyF10VI GCNNNNNNNGC 6 cut(s) 124, 253, 725, 970, 1039, 1364
HpyF3I CTNAG 6 cut(s) 84, 486, 564, 950, 1020, 1077
HpySE526I ACGT 5 cut(s) 543, 666, 688, 1099, 1518
Hsp92I GRCGYC 5 cut(s) 534, 666, 1099, 1451, 1518
Hsp92II CATG 6 cut(s) 58, 309, 676, 835, 1106, 1193
Kzo9I GATC 7 cut(s) 91, 433, 814, 870, 1058, 1266, 1597
LmnI GCTCC 5 cut(s) 177, 847, 1342, 1492, 1624
Lsp1109I GCAGC 3 cut(s) 600, 691, 951
LweI GCATC 5 cut(s) 84, 238, 318, 1020, 1071
MaeI CTAG 3 cut(s) 224, 242, 716
MaeII ACGT 5 cut(s) 543, 666, 688, 1099, 1518
MaeIII GTNAC 3 cut(s) 695, 956, 1429
MalI GATC 7 cut(s) 93, 435, 816, 872, 1060, 1268, 1599
MboI GATC 7 cut(s) 91, 433, 814, 870, 1058, 1266, 1597
MboII GAAGA 5 cut(s) 284, 931, 992, 1272, 1576
MfeI CAATTG 1 cut(s) 722
MflI RGATCY 2 cut(s) 870, 1058
MhlI GDGCHC 3 cut(s) 852, 1044, 1249
MluCI AATT 5 cut(s) 41, 270, 460, 722, 940
MlyI GAGTC 4 cut(s) 283, 504, 554, 896
MmeI TCCRAC 2 cut(s) 246, 1120
Mph1103I ATGCAT 1 cut(s) 311
MroXI GAANNNNTTC 1 cut(s) 944
MseI TTAA 3 cut(s) 1221, 1548, 1639
MslI CAYNNNNRTG 1 cut(s) 1205
MspI CCGG 6 cut(s) 115, 425, 538, 1362, 1434, 1622
MspR9I CCNGG 4 cut(s) 115, 539, 587, 1228
MunI CAATTG 1 cut(s) 722
Mva1269I GAATGC 2 cut(s) 765, 1142
MvaI CCWGG 2 cut(s) 587, 1228
MwoI GCNNNNNNNGC 6 cut(s) 124, 253, 725, 970, 1039, 1364
NciI CCSGG 2 cut(s) 115, 539
NcoI CCATGG 1 cut(s) 831
NdeII GATC 7 cut(s) 91, 433, 814, 870, 1058, 1266, 1597
NheI GCTAGC 1 cut(s) 715
NlaIII CATG 6 cut(s) 58, 309, 676, 835, 1106, 1193
NlaIV GGNNCC 4 cut(s) 849, 872, 1344, 1467
NmuCI GTSAC 1 cut(s) 956
NruI TCGCGA 1 cut(s) 1014
NsbI TGCGCA 1 cut(s) 968
NsiI ATGCAT 1 cut(s) 311
NspI RCATGY 3 cut(s) 58, 309, 1193
PaeI GCATGC 1 cut(s) 309
PaqCI CACCTGC 1 cut(s) 419
PceI AGGCCT 1 cut(s) 1358
PciI ACATGT 1 cut(s) 54
PcsI WCGNNNNNNNCGW 1 cut(s) 87
PctI GAATGC 2 cut(s) 765, 1142
PdmI GAANNNNTTC 1 cut(s) 944
PfeI GAWTC 3 cut(s) 550, 631, 922
PfoI TCCNGGA 2 cut(s) 537, 585
PinAI ACCGGT 1 cut(s) 1433
PkrI GCNGC 6 cut(s) 134, 557, 615, 706, 966, 1455
PleI GAGTC 4 cut(s) 283, 504, 554, 896
PmaCI CACGTG 1 cut(s) 689
PmlI CACGTG 1 cut(s) 689
PpsI GAGTC 4 cut(s) 283, 504, 554, 896
Ppu21I YACGTR 1 cut(s) 689
PscI ACATGT 1 cut(s) 54
Psp6I CCWGG 2 cut(s) 585, 1226
PspCI CACGTG 1 cut(s) 689
PspEI GGTNACC 1 cut(s) 1429
PspFI CCCAGC 3 cut(s) 1118, 1242, 1625
PspGI CCWGG 2 cut(s) 585, 1226
PspN4I GGNNCC 4 cut(s) 849, 872, 1344, 1467
PspPI GGNCC 5 cut(s) 652, 1073, 1116, 1178, 1466
PstNI CAGNNNCTG 1 cut(s) 1610
PsuI RGATCY 2 cut(s) 870, 1058
RruI TCGCGA 1 cut(s) 1014
RsaI GTAC 4 cut(s) 183, 472, 604, 843
RsaNI GTAC 4 cut(s) 182, 471, 603, 842
RseI CAYNNNNRTG 1 cut(s) 1205
SalI GTCGAC 2 cut(s) 668, 1520
SaqAI TTAA 3 cut(s) 1221, 1548, 1639
SatI GCNGC 6 cut(s) 133, 556, 614, 705, 965, 1454
Sau3AI GATC 7 cut(s) 91, 433, 814, 870, 1058, 1266, 1597
Sau96I GGNCC 5 cut(s) 652, 1073, 1116, 1178, 1466
SchI GAGTC 4 cut(s) 283, 504, 554, 896
ScrFI CCNGG 4 cut(s) 115, 539, 587, 1228
SduI GDGCHC 3 cut(s) 852, 1044, 1249
SfaNI GCATC 5 cut(s) 84, 238, 318, 1020, 1071
SfcI CTRYAG 2 cut(s) 729, 1286
SgrDI CGTCGACG 1 cut(s) 1520
SinI GGWCC 3 cut(s) 652, 1073, 1178
SmiMI CAYNNNNRTG 1 cut(s) 1205
SmlI CTYRAG 1 cut(s) 379
SmoI CTYRAG 1 cut(s) 379
SphI GCATGC 1 cut(s) 309
Sse9I AATT 5 cut(s) 41, 270, 460, 722, 940
SseBI AGGCCT 1 cut(s) 1358
SspMI CTAG 3 cut(s) 224, 242, 716
StuI AGGCCT 1 cut(s) 1358
StyD4I CCNGG 4 cut(s) 113, 537, 585, 1226
StyI CCWWGG 2 cut(s) 356, 831
TaaI ACNGT 5 cut(s) 1010, 1166, 1178, 1526, 1553
TaiI ACGT 5 cut(s) 546, 669, 691, 1102, 1521
TaqI TCGA 6 cut(s) 513, 669, 808, 997, 1521, 1593
TaqII GACCGA 1 cut(s) 104
TasI AATT 5 cut(s) 41, 270, 460, 722, 940
TatI WGTACW 1 cut(s) 470
TauI GCSGC 3 cut(s) 135, 558, 1456
TfiI GAWTC 3 cut(s) 550, 631, 922
Tru1I TTAA 3 cut(s) 1221, 1548, 1639
Tru9I TTAA 3 cut(s) 1221, 1548, 1639
TscAI CASTG 2 cut(s) 1254, 1318
TseFI GTSAC 1 cut(s) 956
TseI GCWGC 3 cut(s) 613, 704, 964
Tsp45I GTSAC 1 cut(s) 956
TspDTI ATGAA 1 cut(s) 507
TspGWI ACGGA 2 cut(s) 401, 1379
TspRI CASTG 2 cut(s) 1254, 1318
VneI GTGCAC 1 cut(s) 1040
VpaK11BI GGWCC 3 cut(s) 652, 1073, 1178
XagI CCTNNNNNAGG 1 cut(s) 1236
XceI RCATGY 3 cut(s) 58, 309, 1193
XcmI CCANNNNNNNNNTGG 1 cut(s) 646
XmiI GTMKAC 3 cut(s) 669, 1005, 1521
XmnI GAANNNNTTC 1 cut(s) 944
XspI CTAG 3 cut(s) 224, 242, 716
ZraI GACGTC 3 cut(s) 667, 1100, 1519
Zsp2I ATGCAT 1 cut(s) 311
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.