Rroxscaffold_1G00042950

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000160
Physical Location & Seq
Reverse (-)
61245408 .. 61248586
3179 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00042950.1

Sequence Viewer

Length: 909 bp
ATGGTTTACGTGCTTCCGGCTAGGTATGCACTAGCGATCGCTGCTCGGGACCGTGTAGAAGCTAAGGAGGAAAATGCACAGCCCTTGCAGATCACGTCGGCGGACTATGCAACTTCTCGGAATCAAGAGAGAGAAAATCCGGTCTACTTCCTCACGCTTAAGAACTTCGCCGGCACCGTGACGGAGACCTTGGGGTTGCTTTTCTTGCGCATCAAGGTTGGCCCCTGCGGAAGGAGTTTACGCTTTCTTTGTGACGGACCGTTATGCAGCCCTACGCCTCTATTCGGGCAGACCGGATCCACCGGAGTTACCGTGTCCCGTCAACTCTCCACCGAGAACCGATTATCCGGAACAGGGAAACAAATAAAGCCGAGGTCGGTGGCATCAATAACAAGGGCCGCCCCACGGGGGTGGCGGCCTACGAATGGCGCGGTGGGGGCTTACGCTCGCGAAAGAAGGCTTACGGAGGCACGGCCACGCCGTGCCCAAACCGATAACCGATTAATGGATTACGACCTCCCGGACGGGGGAATAGAGGCCTTCCGCTCACCGCTTGGAAGTATTGCTGGAATTGGGAGTCAAGGACATTCGGTGCGCGGCGACTCTTTACTCGTGATCAATCGGCTTGAGAGAGAGTTTATTCCTCACGAGTACAATTGCGTTGCCAATGAGCTCGCTCAACGGCTACGAGGCATTACGTTAAAGTATGGGGTCCGCGAGCGCATCTTGAAAGTGGAGCGCCGCACGTTGCCTTCTGGCTCGTGCGACGACCCGCCCGATGATCCTATCGTCATAGTCCTAGAGCCTATTGACGTCGATTGGCGCATTCCGTTGATCGCTTACCTCGGACGACCGGATCCTACGGCGGACGGGGAAGATTCATTTTTTTGCCTTGAATTACTTCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

302

Amino Acids

33.39

Weight (kDa)

8.75

Isoelectric Point (pI)

38.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000160)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g11612 FvH4_2g25851 FvH4_3g22802 FvH4_3g22805 FvH4_3g31361 FvH4_3g31382 FvH4_4g05272 FvH4_4g05273 FvH4_4g14567 FvH4_4g15161 FvH4_5g22540 FvH4_6g13113 FvH4_6g31923 FvH4_6g31924 FvH4_6g33651 FvH4_6g45122 FvH4_7g03662
pyrus_communis pycom01g04240 pycom01g24010 pycom02g18210 pycom02g19420 pycom05g06510 pycom09g15750 pycom09g18940 pycom12g02580 pycom12g03100 pycom12g08310 pycom13g22710 pycom13g28060 pycom16g18340 pycom16g18350 pycom16g24880 pycom16g26240 pycom461g00260 pycom520g00980 pycom520g01320
rosa_chinensis RchiOBHm_Chr1g0320731 RchiOBHm_Chr2g0102771 RchiOBHm_Chr3g0462151 RchiOBHm_Chr5g0038141 RchiOBHm_Chr5g0069371 RchiOBHm_Chr7g0239101
rosa_multiflora Rmu_co8038252.1_g000001 Rmu_co8138412.1_g000001 Rmu_co8331087.1_g000001 Rmu_co8479311.1_g000001 Rmu_sc0000112.1_g000018 Rmu_sc0000346.1_g000012 Rmu_sc0002102.1_g000002 Rmu_sc0003505.1_g000013 Rmu_sc0004249.1_g000007 Rmu_sc0004448.1_g000010 Rmu_sc0004594.1_g000011 Rmu_sc0004915.1_g000010 Rmu_sc0008019.1_g000019 Rmu_sc0008303.1_g000001 Rmu_sc0008355.1_g000005 Rmu_sc0009253.1_g000018 Rmu_sc0010211.1_g000002 Rmu_sc0010252.1_g000009 Rmu_sc0011534.1_g000008 Rmu_sc0014811.1_g000009 Rmu_sc0019475.1_g000001 Rmu_sc0024897.1_g000001 Rmu_sc0024898.1_g000001 Rmu_sc0031791.1_g000001 Rmu_sc0038715.1_g000001
rosa_roxburghii Rroxscaffold_165G00436940 Rroxscaffold_174G00435270 Rroxscaffold_177G00434330 Rroxscaffold_177G00434340 Rroxscaffold_177G00434350 Rroxscaffold_1G00002160 Rroxscaffold_1G00025260 Rroxscaffold_1G00042950 Rroxscaffold_1G00068010 Rroxscaffold_2G00107530 Rroxscaffold_3G00221190 Rroxscaffold_3G00221520 Rroxscaffold_3G00223200 Rroxscaffold_4G00322230 Rroxscaffold_4G00331810 Rroxscaffold_5G00385150 Rroxscaffold_5G00387510 Rroxscaffold_6G00410520 Rroxscaffold_6G00423360 Rroxscaffold_6G00423370 Rroxscaffold_6G00429210 Rroxscaffold_7G00158300 Rroxscaffold_7G00163480 Rroxscaffold_7G00171410 Rroxscaffold_7G00178940 Rroxscaffold_7G00199480 Rroxscaffold_7G00205630 Rroxscaffold_7G00207440
rosa_rugosa Rorug01G0056400 Rorug04G0063900 Rorug05G0251400 Rorug07G0221900
rosa_samantha Rh1DG169400 Rh2AG292900 Rh2DG519200 Rh4DG260600 Rh5AG042600 Rh6BG117500
rosa_wichuraiana Rw0G001900 Rw0G005150 Rw0G006380 Rw0G015140 Rw0G016320 Rw0G019440 Rw0G019840 Rw0G023740 Rw1G001590 Rw1G002180 Rw1G003560 Rw1G004280 Rw1G006110 Rw1G006680 Rw1G007920 Rw1G008480 Rw1G009120 Rw1G010310 Rw1G014900 Rw1G019650 Rw1G022070 Rw1G022170 Rw1G041570 Rw2G002740 Rw2G005760 Rw2G032370 Rw2G046770 Rw2G050600 Rw2G051420 Rw3G015930 Rw3G016280 Rw3G019580 Rw3G028420 Rw4G003430 Rw4G005350 Rw4G007530 Rw4G008150 Rw4G009580 Rw4G010250 Rw4G015800 Rw4G017000 Rw4G017910 Rw4G018510 Rw4G019700 Rw4G031010 Rw5G012650 Rw5G020140 Rw5G022060 Rw5G034420 Rw5G035560 Rw5G043010 Rw5G046750 Rw5G047340 Rw5G049500 Rw6G001390 Rw6G002210 Rw6G004530 Rw6G004770 Rw6G005100 Rw6G005890 Rw6G011860 Rw6G014680 Rw6G019480 Rw6G028970 Rw6G033800 Rw7G013050 Rw7G014800 Rw7G025760 Rw7G025850 Rw7G026730 Rw7G026870 Rw7G036330 Rw7G036430 Rw7G039320 Rw7G039510 Rw7G039560 Rw7G041370 Rw7G042050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 816
Acc16I TGCGCA 1 cut(s) 209
AccB1I GGYRCC 1 cut(s) 173
AccBSI CCGCTC 1 cut(s) 546
AccI GTMKAC 1 cut(s) 144
AccII CGCG 4 cut(s) 431, 450, 597, 717
AccIII TCCGGA 1 cut(s) 347
AclWI GGATC 5 cut(s) 291, 304, 776, 851, 864
AcoI YGGCCR 1 cut(s) 473
AcyI GRCGYC 1 cut(s) 813
AdeI CACNNNGTG 1 cut(s) 482
AfaI GTAC 1 cut(s) 653
AfiI CCNNNNNNNGG 9 cut(s) 231, 284, 354, 405, 408, 425, 505, 526, 527
AflII CTTAAG 1 cut(s) 158
AgsI TTSAA 2 cut(s) 730, 896
AjiI CACGTC 1 cut(s) 96
AleI CACNNNNGTG 1 cut(s) 409
AloI GAACNNNNNNTCC 2 cut(s) 329, 361
AluBI AGCT 2 cut(s) 62, 673
AluI AGCT 2 cut(s) 62, 673
Alw21I GWGCWC 1 cut(s) 675
Alw26I GTCTC 1 cut(s) 179
AlwI GGATC 5 cut(s) 291, 304, 776, 851, 864
Ama87I CYCGRG 1 cut(s) 45
Aor13HI TCCGGA 1 cut(s) 347
AoxI GGCC 5 cut(s) 220, 396, 416, 473, 537
ApeKI GCWGC 2 cut(s) 41, 267
AseI ATTAAT 1 cut(s) 503
AsiSI GCGATCGC 1 cut(s) 39
Asp700I GAANNNNTTC 1 cut(s) 900
AspLEI GCGC 6 cut(s) 210, 431, 597, 723, 741, 825
AspS9I GGNCC 5 cut(s) 49, 221, 257, 396, 712
AsuC2I CCSGG 1 cut(s) 521
AsuHPI GGTGA 1 cut(s) 540
AvaI CYCGRG 1 cut(s) 45
AvaII GGWCC 3 cut(s) 49, 257, 712
BaeGI GKGCMC 1 cut(s) 487
BamHI GGATCC 2 cut(s) 296, 856
BanI GGYRCC 1 cut(s) 173
BanII GRGCYC 1 cut(s) 675
BauI CACGAG 3 cut(s) 611, 647, 760
Bbv12I GWGCWC 1 cut(s) 675
BbvI GCAGC 2 cut(s) 28, 279
BceAI ACGGC 4 cut(s) 465, 488, 698, 879
BclI TGATCA 1 cut(s) 615
BcnI CCSGG 1 cut(s) 521
BcoDI GTCTC 1 cut(s) 179
BfaI CTAG 3 cut(s) 21, 32, 800
BfoI RGCGCY 1 cut(s) 742
BfrI CTTAAG 1 cut(s) 158
BisI GCNGC 6 cut(s) 42, 268, 399, 416, 598, 742
BlsI GCNGC 6 cut(s) 43, 269, 400, 417, 599, 743
Bme1390I CCNGG 1 cut(s) 521
Bme18I GGWCC 3 cut(s) 49, 257, 712
BmeT110I CYCGRG 1 cut(s) 45
BmgBI CACGTC 1 cut(s) 96
BmgT120I GGNCC 5 cut(s) 49, 221, 257, 396, 712
BmiI GGNNCC 6 cut(s) 50, 175, 223, 298, 713, 858
BmrFI CCNGG 1 cut(s) 521
BmsI GCATC 3 cut(s) 219, 392, 732
Bpu10I CCTNAGC 1 cut(s) 63
BpuEI CTTGAG 1 cut(s) 647
BpuMI CCSGG 1 cut(s) 521
BsaAI YACGTR 1 cut(s) 10
BsaHI GRCGYC 1 cut(s) 813
BsaI GGTCTC 1 cut(s) 179
BsaJI CCNNGG 4 cut(s) 189, 371, 404, 844
BsaWI WCCGGW 5 cut(s) 139, 293, 302, 347, 853
BsaXI ACNNNNNCTCC 2 cut(s) 297, 327
Bsc4I CCNNNNNNNGG 9 cut(s) 231, 284, 354, 405, 408, 425, 505, 526, 527
Bse118I RCCGGY 1 cut(s) 170
BseAI TCCGGA 1 cut(s) 347
BseDI CCNNGG 4 cut(s) 189, 371, 404, 844
BseLI CCNNNNNNNGG 9 cut(s) 231, 284, 354, 405, 408, 425, 505, 526, 527
BseSI GKGCMC 1 cut(s) 487
BseXI GCAGC 2 cut(s) 28, 279
Bsh1236I CGCG 4 cut(s) 431, 450, 597, 717
Bsh1285I CGRYCG 2 cut(s) 39, 854
BshFI GGCC 5 cut(s) 222, 398, 418, 475, 539
BshNI GGYRCC 1 cut(s) 173
BsiEI CGRYCG 2 cut(s) 39, 854
BsiHKAI GWGCWC 1 cut(s) 675
BsiHKCI CYCGRG 1 cut(s) 45
BsiSI CCGG 8 cut(s) 17, 140, 171, 294, 303, 348, 521, 854
BslFI GGGAC 2 cut(s) 62, 301
BslI CCNNNNNNNGG 9 cut(s) 231, 284, 354, 405, 408, 425, 505, 526, 527
BsmAI GTCTC 1 cut(s) 179
BsmFI GGGAC 2 cut(s) 62, 301
BsmI GAATGC 1 cut(s) 825
BsnI GGCC 5 cut(s) 222, 398, 418, 475, 539
Bso31I GGTCTC 1 cut(s) 179
BsoBI CYCGRG 1 cut(s) 45
Bsp1286I GDGCHC 2 cut(s) 487, 675
Bsp13I TCCGGA 1 cut(s) 347
Bsp143I GATC 7 cut(s) 36, 90, 296, 615, 781, 834, 856
Bsp68I TCGCGA 1 cut(s) 450
BspANI GGCC 5 cut(s) 222, 398, 418, 475, 539
BspEI TCCGGA 1 cut(s) 347
BspFNI CGCG 4 cut(s) 431, 450, 597, 717
BspLI GGNNCC 6 cut(s) 50, 175, 223, 298, 713, 858
BspPI GGATC 5 cut(s) 291, 304, 776, 851, 864
BspT107I GGYRCC 1 cut(s) 173
BspTI CTTAAG 1 cut(s) 158
BspTNI GGTCTC 1 cut(s) 179
BsrBI CCGCTC 1 cut(s) 546
BsrFI RCCGGY 1 cut(s) 170
BssAI RCCGGY 1 cut(s) 170
BssECI CCNNGG 4 cut(s) 189, 371, 404, 844
BssMI GATC 7 cut(s) 36, 90, 296, 615, 781, 834, 856
BssNI GRCGYC 1 cut(s) 813
BssSI CACGAG 3 cut(s) 611, 647, 760
BssT1I CCWWGG 1 cut(s) 189
Bst2BI CACGAG 3 cut(s) 611, 647, 760
Bst4CI ACNGT 4 cut(s) 53, 178, 261, 313
BstACI GRCGYC 1 cut(s) 813
BstAFI CTTAAG 1 cut(s) 158
BstBAI YACGTR 1 cut(s) 10
BstC8I GCNNGC 4 cut(s) 172, 448, 675, 719
BstDEI CTNAG 2 cut(s) 63, 906
BstDSI CCRYGG 1 cut(s) 404
BstENI CCTNNNNNAGG 1 cut(s) 229
BstFNI CGCG 4 cut(s) 431, 450, 597, 717
BstH2I RGCGCY 1 cut(s) 742
BstHHI GCGC 6 cut(s) 210, 431, 597, 723, 741, 825
BstKTI GATC 7 cut(s) 39, 93, 299, 618, 784, 837, 859
BstMAI GTCTC 1 cut(s) 179
BstMBI GATC 7 cut(s) 36, 90, 296, 615, 781, 834, 856
BstMCI CGRYCG 2 cut(s) 39, 854
BstMWI GCNNNNNNNGC 5 cut(s) 26, 41, 107, 205, 437
BstSCI CCNGG 1 cut(s) 519
BstSLI GKGCMC 1 cut(s) 487
BstUI CGCG 4 cut(s) 431, 450, 597, 717
BstV1I GCAGC 2 cut(s) 28, 279
BstX2I RGATCY 2 cut(s) 296, 856
BstXI CCANNNNNNTGG 1 cut(s) 411
BstYI RGATCY 2 cut(s) 296, 856
BsuRI GGCC 5 cut(s) 222, 398, 418, 475, 539
BtgI CCRYGG 1 cut(s) 404
BtrI CACGTC 1 cut(s) 96
BtuMI TCGCGA 1 cut(s) 450
Cac8I GCNNGC 4 cut(s) 172, 448, 675, 719
CfoI GCGC 6 cut(s) 210, 431, 597, 723, 741, 825
Cfr10I RCCGGY 1 cut(s) 170
Cfr13I GGNCC 5 cut(s) 49, 221, 257, 396, 712
CpoI CGGWCCG 1 cut(s) 257
Csp6I GTAC 1 cut(s) 652
CspI CGGWCCG 1 cut(s) 257
CviQI GTAC 1 cut(s) 652
DdeI CTNAG 2 cut(s) 63, 906
DpnI GATC 7 cut(s) 38, 92, 298, 617, 783, 836, 858
DpnII GATC 7 cut(s) 36, 90, 296, 615, 781, 834, 856
DraIII CACNNNGTG 1 cut(s) 482
EaeI YGGCCR 1 cut(s) 473
EciI GGCGGA 2 cut(s) 116, 881
Ecl136II GAGCTC 1 cut(s) 673
Eco130I CCWWGG 1 cut(s) 189
Eco147I AGGCCT 1 cut(s) 539
Eco24I GRGCYC 1 cut(s) 675
Eco31I GGTCTC 1 cut(s) 179
Eco47I GGWCC 3 cut(s) 49, 257, 712
Eco53kI GAGCTC 1 cut(s) 673
Eco88I CYCGRG 1 cut(s) 45
EcoICRI GAGCTC 1 cut(s) 673
EcoNI CCTNNNNNAGG 1 cut(s) 229
EcoT14I CCWWGG 1 cut(s) 189
EcoT38I GRGCYC 1 cut(s) 675
ErhI CCWWGG 1 cut(s) 189
FaiI YATR 5 cut(s) 27, 108, 265, 708, 794
FaqI GGGAC 2 cut(s) 62, 301
FauI CCCGC 1 cut(s) 780
FbaI TGATCA 1 cut(s) 615
FblI GTMKAC 1 cut(s) 144
Fnu4HI GCNGC 6 cut(s) 42, 268, 399, 416, 598, 742
FriOI GRGCYC 1 cut(s) 675
Fsp4HI GCNGC 6 cut(s) 42, 268, 399, 416, 598, 742
FspBI CTAG 3 cut(s) 21, 32, 800
FspI TGCGCA 1 cut(s) 209
GlaI GCGC 6 cut(s) 209, 430, 596, 722, 740, 824
GluI GCNGC 6 cut(s) 42, 268, 399, 416, 598, 742
HaeII RGCGCY 1 cut(s) 742
HaeIII GGCC 5 cut(s) 222, 398, 418, 475, 539
HapII CCGG 8 cut(s) 17, 140, 171, 294, 303, 348, 521, 854
HhaI GCGC 6 cut(s) 210, 431, 597, 723, 741, 825
Hin1I GRCGYC 1 cut(s) 813
Hin6I GCGC 6 cut(s) 208, 429, 595, 721, 739, 823
HinP1I GCGC 6 cut(s) 208, 429, 595, 721, 739, 823
HincII GTYRAC 1 cut(s) 323
HindII GTYRAC 1 cut(s) 323
HinfI GANTC 4 cut(s) 121, 577, 602, 878
HpaII CCGG 8 cut(s) 17, 140, 171, 294, 303, 348, 521, 854
HphI GGTGA 1 cut(s) 540
Hpy166II GTNNAC 4 cut(s) 7, 145, 239, 323
Hpy188I TCNGA 2 cut(s) 120, 848
Hpy188III TCNNGA 7 cut(s) 47, 125, 348, 449, 613, 647, 727
Hpy8I GTNNAC 4 cut(s) 7, 145, 239, 323
Hpy99I CGWCG 3 cut(s) 100, 770, 818
HpyAV CCTTC 4 cut(s) 225, 450, 550, 762
HpyCH4III ACNGT 4 cut(s) 53, 178, 261, 313
HpyCH4IV ACGT 5 cut(s) 9, 95, 698, 746, 813
HpyCH4V TGCA 5 cut(s) 29, 77, 88, 110, 267
HpyF10VI GCNNNNNNNGC 5 cut(s) 26, 41, 107, 205, 437
HpyF3I CTNAG 2 cut(s) 63, 906
HpySE526I ACGT 5 cut(s) 9, 95, 698, 746, 813
Hsp92I GRCGYC 1 cut(s) 813
HspAI GCGC 6 cut(s) 208, 429, 595, 721, 739, 823
Kpn2I TCCGGA 1 cut(s) 347
KroI GCCGGC 1 cut(s) 170
KroNI GCCGGC 1 cut(s) 172
Ksp22I TGATCA 1 cut(s) 615
Kzo9I GATC 7 cut(s) 36, 90, 296, 615, 781, 834, 856
LmnI GCTCC 1 cut(s) 736
Lsp1109I GCAGC 2 cut(s) 28, 279
LweI GCATC 3 cut(s) 219, 392, 732
MaeI CTAG 3 cut(s) 21, 32, 800
MaeII ACGT 5 cut(s) 9, 95, 698, 746, 813
MaeIII GTNAC 3 cut(s) 178, 251, 307
MalI GATC 7 cut(s) 38, 92, 298, 617, 783, 836, 858
MbiI CCGCTC 1 cut(s) 546
MboI GATC 7 cut(s) 36, 90, 296, 615, 781, 834, 856
MboII GAAGA 1 cut(s) 887
MfeI CAATTG 1 cut(s) 655
MflI RGATCY 2 cut(s) 296, 856
MhlI GDGCHC 2 cut(s) 487, 675
MluCI AATT 3 cut(s) 570, 655, 896
MlyI GAGTC 2 cut(s) 586, 596
MroI TCCGGA 1 cut(s) 347
MroNI GCCGGC 1 cut(s) 170
MroXI GAANNNNTTC 1 cut(s) 900
MseI TTAA 3 cut(s) 159, 503, 701
MslI CAYNNNNRTG 1 cut(s) 409
MspCI CTTAAG 1 cut(s) 158
MspI CCGG 8 cut(s) 17, 140, 171, 294, 303, 348, 521, 854
MspR9I CCNGG 1 cut(s) 521
MunI CAATTG 1 cut(s) 655
Mva1269I GAATGC 1 cut(s) 825
MvnI CGCG 4 cut(s) 431, 450, 597, 717
MwoI GCNNNNNNNGC 5 cut(s) 26, 41, 107, 205, 437
NaeI GCCGGC 1 cut(s) 172
NciI CCSGG 1 cut(s) 521
NdeII GATC 7 cut(s) 36, 90, 296, 615, 781, 834, 856
NgoMIV GCCGGC 1 cut(s) 170
NlaIV GGNNCC 6 cut(s) 50, 175, 223, 298, 713, 858
NmeAIII GCCGAG 1 cut(s) 396
NmuCI GTSAC 2 cut(s) 178, 251
NruI TCGCGA 1 cut(s) 450
NsbI TGCGCA 1 cut(s) 209
OliI CACNNNNGTG 1 cut(s) 409
PceI AGGCCT 1 cut(s) 539
PcsI WCGNNNNNNNCGW 3 cut(s) 174, 478, 774
PctI GAATGC 1 cut(s) 825
PdiI GCCGGC 1 cut(s) 172
PdmI GAANNNNTTC 1 cut(s) 900
PfeI GAWTC 2 cut(s) 121, 878
PfoI TCCNGGA 1 cut(s) 519
PkrI GCNGC 6 cut(s) 43, 269, 400, 417, 599, 743
Ple19I CGATCG 1 cut(s) 39
PleI GAGTC 2 cut(s) 585, 596
PpsI GAGTC 2 cut(s) 585, 596
Ppu21I YACGTR 1 cut(s) 10
PshBI ATTAAT 1 cut(s) 503
Psp124BI GAGCTC 1 cut(s) 675
PspN4I GGNNCC 6 cut(s) 50, 175, 223, 298, 713, 858
PspPI GGNCC 5 cut(s) 49, 221, 257, 396, 712
PsuI RGATCY 2 cut(s) 296, 856
PvuI CGATCG 1 cut(s) 39
RgaI GCGATCGC 1 cut(s) 39
RruI TCGCGA 1 cut(s) 450
RsaI GTAC 1 cut(s) 653
RsaNI GTAC 1 cut(s) 652
RseI CAYNNNNRTG 1 cut(s) 409
Rsr2I CGGWCCG 1 cut(s) 257
RsrII CGGWCCG 1 cut(s) 257
SacI GAGCTC 1 cut(s) 675
SaqAI TTAA 3 cut(s) 159, 503, 701
SatI GCNGC 6 cut(s) 42, 268, 399, 416, 598, 742
Sau3AI GATC 7 cut(s) 36, 90, 296, 615, 781, 834, 856
Sau96I GGNCC 5 cut(s) 49, 221, 257, 396, 712
SchI GAGTC 2 cut(s) 586, 596
ScrFI CCNGG 1 cut(s) 521
SduI GDGCHC 2 cut(s) 487, 675
SfaAI GCGATCGC 1 cut(s) 39
SfaNI GCATC 3 cut(s) 219, 392, 732
SgfI GCGATCGC 1 cut(s) 39
SinI GGWCC 3 cut(s) 49, 257, 712
SmiMI CAYNNNNRTG 1 cut(s) 409
SmlI CTYRAG 2 cut(s) 158, 626
SmoI CTYRAG 2 cut(s) 158, 626
Sse9I AATT 3 cut(s) 570, 655, 896
SseBI AGGCCT 1 cut(s) 539
SspMI CTAG 3 cut(s) 21, 32, 800
SstI GAGCTC 1 cut(s) 675
StuI AGGCCT 1 cut(s) 539
StyD4I CCNGG 1 cut(s) 519
StyI CCWWGG 1 cut(s) 189
TaaI ACNGT 4 cut(s) 53, 178, 261, 313
TaiI ACGT 5 cut(s) 12, 98, 701, 749, 816
TaqI TCGA 1 cut(s) 816
TasI AATT 3 cut(s) 570, 655, 896
TatI WGTACW 1 cut(s) 651
TauI GCSGC 4 cut(s) 401, 418, 600, 744
TfiI GAWTC 2 cut(s) 121, 878
Tru1I TTAA 3 cut(s) 159, 503, 701
Tru9I TTAA 3 cut(s) 159, 503, 701
TseFI GTSAC 2 cut(s) 178, 251
TseI GCWGC 2 cut(s) 41, 267
Tsp45I GTSAC 2 cut(s) 178, 251
TspDTI ATGAA 1 cut(s) 870
TspGWI ACGGA 4 cut(s) 197, 270, 479, 819
Vha464I CTTAAG 1 cut(s) 158
VpaK11BI GGWCC 3 cut(s) 49, 257, 712
VspI ATTAAT 1 cut(s) 503
XagI CCTNNNNNAGG 1 cut(s) 229
XmiI GTMKAC 1 cut(s) 144
XmnI GAANNNNTTC 1 cut(s) 900
XspI CTAG 3 cut(s) 21, 32, 800
ZraI GACGTC 1 cut(s) 814
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.