Rw0G023740

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig01098
OG0000160
Physical Location & Seq
Forward (+)
79700 .. 81139
1440 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G023740.1

Sequence Viewer

Length: 1143 bp
ATGCGGCAACACAAGCTCAAGATGAACCCCACCAAATGCGTTTTTGGAGTTCAAGCAGGAGATTTCCTGGGCTTCATCGTCCATCAGAGGGGAATCGAGGTCCCTGAAGACAAAGCAAGCACATTGCAAGGGCAGAATGAGTTTGTATGGGAGCCTAAACATCAAGAGGCTTTCGACAGGATCAAGGCCTATTTAGCGAGCCCACTAGTACTCGTTCCCCCCAGAGCTGGATTTCCATTGAAATTATATATTTCAGCAGCTGAGGCTTCCATTGGCAGTTTACTCGCCCAAGACGATGAGGAAGGCGTTGAGCATGCCATATTCTACCTCAGTAGGACACTGACCGATTGCGAGACAAGGTATAATCCTATGGAGAAGCTGTGTCTCACATTGTACTTTTCAGCATGTAAGTTGCGACACTACATGTTATCCTTCACTACATGCATCATTGCTCAAACCGACCTGGCAGTAAAAGGACAGGCCATCAGAGACTTTCTGGCACATCACCCTATGTTGGAGATCCCACCAGTGAAGGAGTTAGAGATAGCGACTGCCACTACAACTAGACCAGACTTGGCACGCATCCCAGAGTACGCAGTATGGTATCAAGCCACGATCTCCTTGCAACCCTGGGTTTTATTTTTTGATGGCTCAAGAACTGAAACATTAGCAGGGGCAGGGATCGTTCTGGAAAACCCAGCGGGTGATCATTTCTCTTATTGTTTCCAATTGGAGTTTAAATGTACAAACAATCAAGCAGAGTATGAGGCCTTTATCATCGGCCTAGAGGTCCTACTAGAATTGGGAGTAAGGGACGTTCAGATCCGCGGTGACTCTTTGCTCCTTCTGGATCAATTCGATGACGTGGATTTGGAGTACATCCCTCGCGAGCGCAATTTTGCGGCCAATAAACTCGCTCAACTGGCTACAGTCATTACATTGAAATATGGAGTTCGCGAGCGCATTTTGAAAGTCGAGCGCCGCACGCTGCCTTCATGGCTCGCAAGGCCTGACCCACATGAATATCCAGTCGTCGCGGTCCTAGACCCAATTGACGTCGATTGGCGCATTCCGTTGATCGATTATCTCAGACAACCAGATCCTACAGTAGACAGGAAGACTCGTTTTCTTGCCTTAAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

380

Amino Acids

43.3

Weight (kDa)

5.39

Isoelectric Point (pI)

30.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RT_RNaseH_2 PF17919 50 - 144 4e-20 RNase H-like domain found in reverse transcriptase
RT_RNaseH PF17917 79 - 154 1.2e-12 RNase H-like domain found in reverse transcriptase
RVT_3 PF13456 215 - 284 9.7e-09 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000160)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g11612 FvH4_2g25851 FvH4_3g22802 FvH4_3g22805 FvH4_3g31361 FvH4_3g31382 FvH4_4g05272 FvH4_4g05273 FvH4_4g14567 FvH4_4g15161 FvH4_5g22540 FvH4_6g13113 FvH4_6g31923 FvH4_6g31924 FvH4_6g33651 FvH4_6g45122 FvH4_7g03662
pyrus_communis pycom01g04240 pycom01g24010 pycom02g18210 pycom02g19420 pycom05g06510 pycom09g15750 pycom09g18940 pycom12g02580 pycom12g03100 pycom12g08310 pycom13g22710 pycom13g28060 pycom16g18340 pycom16g18350 pycom16g24880 pycom16g26240 pycom461g00260 pycom520g00980 pycom520g01320
rosa_chinensis RchiOBHm_Chr1g0320731 RchiOBHm_Chr2g0102771 RchiOBHm_Chr3g0462151 RchiOBHm_Chr5g0038141 RchiOBHm_Chr5g0069371 RchiOBHm_Chr7g0239101
rosa_multiflora Rmu_co8038252.1_g000001 Rmu_co8138412.1_g000001 Rmu_co8331087.1_g000001 Rmu_co8479311.1_g000001 Rmu_sc0000112.1_g000018 Rmu_sc0000346.1_g000012 Rmu_sc0002102.1_g000002 Rmu_sc0003505.1_g000013 Rmu_sc0004249.1_g000007 Rmu_sc0004448.1_g000010 Rmu_sc0004594.1_g000011 Rmu_sc0004915.1_g000010 Rmu_sc0008019.1_g000019 Rmu_sc0008303.1_g000001 Rmu_sc0008355.1_g000005 Rmu_sc0009253.1_g000018 Rmu_sc0010211.1_g000002 Rmu_sc0010252.1_g000009 Rmu_sc0011534.1_g000008 Rmu_sc0014811.1_g000009 Rmu_sc0019475.1_g000001 Rmu_sc0024897.1_g000001 Rmu_sc0024898.1_g000001 Rmu_sc0031791.1_g000001 Rmu_sc0038715.1_g000001
rosa_roxburghii Rroxscaffold_165G00436940 Rroxscaffold_174G00435270 Rroxscaffold_177G00434330 Rroxscaffold_177G00434340 Rroxscaffold_177G00434350 Rroxscaffold_1G00002160 Rroxscaffold_1G00025260 Rroxscaffold_1G00042950 Rroxscaffold_1G00068010 Rroxscaffold_2G00107530 Rroxscaffold_3G00221190 Rroxscaffold_3G00221520 Rroxscaffold_3G00223200 Rroxscaffold_4G00322230 Rroxscaffold_4G00331810 Rroxscaffold_5G00385150 Rroxscaffold_5G00387510 Rroxscaffold_6G00410520 Rroxscaffold_6G00423360 Rroxscaffold_6G00423370 Rroxscaffold_6G00429210 Rroxscaffold_7G00158300 Rroxscaffold_7G00163480 Rroxscaffold_7G00171410 Rroxscaffold_7G00178940 Rroxscaffold_7G00199480 Rroxscaffold_7G00205630 Rroxscaffold_7G00207440
rosa_rugosa Rorug01G0056400 Rorug04G0063900 Rorug05G0251400 Rorug07G0221900
rosa_samantha Rh1DG169400 Rh2AG292900 Rh2DG519200 Rh4DG260600 Rh5AG042600 Rh6BG117500
rosa_wichuraiana Rw0G001900 Rw0G005150 Rw0G006380 Rw0G015140 Rw0G016320 Rw0G019440 Rw0G019840 Rw0G023740 Rw1G001590 Rw1G002180 Rw1G003560 Rw1G004280 Rw1G006110 Rw1G006680 Rw1G007920 Rw1G008480 Rw1G009120 Rw1G010310 Rw1G014900 Rw1G019650 Rw1G022070 Rw1G022170 Rw1G041570 Rw2G002740 Rw2G005760 Rw2G032370 Rw2G046770 Rw2G050600 Rw2G051420 Rw3G015930 Rw3G016280 Rw3G019580 Rw3G028420 Rw4G003430 Rw4G005350 Rw4G007530 Rw4G008150 Rw4G009580 Rw4G010250 Rw4G015800 Rw4G017000 Rw4G017910 Rw4G018510 Rw4G019700 Rw4G031010 Rw5G012650 Rw5G020140 Rw5G022060 Rw5G034420 Rw5G035560 Rw5G043010 Rw5G046750 Rw5G047340 Rw5G049500 Rw6G001390 Rw6G002210 Rw6G004530 Rw6G004770 Rw6G005100 Rw6G005890 Rw6G011860 Rw6G014680 Rw6G019480 Rw6G028970 Rw6G033800 Rw7G013050 Rw7G014800 Rw7G025760 Rw7G025850 Rw7G026730 Rw7G026870 Rw7G036330 Rw7G036430 Rw7G039320 Rw7G039510 Rw7G039560 Rw7G041370 Rw7G042050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1059
AccI GTMKAC 1 cut(s) 1110
AccII CGCG 4 cut(s) 828, 888, 957, 1037
AciI CCGC 7 cut(s) 4, 701, 826, 828, 902, 982, 1037
AclWI GGATC 6 cut(s) 188, 514, 689, 817, 858, 1094
AcoI YGGCCR 1 cut(s) 903
AcuI CTGAAG 1 cut(s) 126
AcyI GRCGYC 1 cut(s) 1056
AfaI GTAC 5 cut(s) 210, 395, 593, 745, 878
AfiI CCNNNNNNNGG 3 cut(s) 88, 227, 514
AflIII ACRYGT 1 cut(s) 423
AgsI TTSAA 4 cut(s) 53, 241, 943, 970
AhlI ACTAGT 1 cut(s) 205
AjiI CACGTC 1 cut(s) 865
AjnI CCWGG 3 cut(s) 66, 462, 629
AluBI AGCT 4 cut(s) 16, 227, 260, 379
AluI AGCT 4 cut(s) 16, 227, 260, 379
Alw26I GTCTC 3 cut(s) 347, 389, 483
AlwI GGATC 6 cut(s) 188, 514, 689, 817, 858, 1094
AlwNI CAGNNNCTG 1 cut(s) 260
AoxI GGCC 6 cut(s) 186, 480, 768, 781, 903, 1007
ApeKI GCWGC 2 cut(s) 257, 988
AspLEI GCGC 4 cut(s) 894, 963, 981, 1068
AspS9I GGNCC 3 cut(s) 100, 790, 1039
AsuHPI GGTGA 3 cut(s) 497, 716, 842
AvaII GGWCC 3 cut(s) 100, 790, 1039
BanII GRGCYC 1 cut(s) 203
BbsI GAAGAC 2 cut(s) 114, 1124
BbvCI CCTCAGC 1 cut(s) 261
BbvI GCAGC 2 cut(s) 269, 975
BccI CCATC 3 cut(s) 90, 491, 641
BcgI CGANNNNNNTGC 4 cut(s) 265, 299, 604, 638
BciT130I CCWGG 3 cut(s) 68, 464, 631
BclI TGATCA 1 cut(s) 706
BcoDI GTCTC 3 cut(s) 347, 389, 483
BcuI ACTAGT 1 cut(s) 205
BfaI CTAG 5 cut(s) 206, 564, 785, 797, 1043
BfmI CTRYAG 2 cut(s) 927, 1104
BfoI RGCGCY 1 cut(s) 982
BglI GCCNNNNNGGC 1 cut(s) 997
BisI GCNGC 5 cut(s) 5, 258, 903, 982, 989
BlsI GCNGC 5 cut(s) 6, 259, 904, 983, 990
BmcAI AGTACT 1 cut(s) 210
Bme1390I CCNGG 3 cut(s) 68, 464, 631
Bme18I GGWCC 3 cut(s) 100, 790, 1039
BmgBI CACGTC 1 cut(s) 865
BmgT120I GGNCC 3 cut(s) 100, 790, 1039
BmiI GGNNCC 2 cut(s) 102, 153
BmrFI CCNGG 3 cut(s) 68, 464, 631
BmsI GCATC 2 cut(s) 453, 591
BpiI GAAGAC 2 cut(s) 114, 1124
Bpu10I CCTNAGC 1 cut(s) 261
BpuEI CTTGAG 1 cut(s) 637
Bsa29I ATCGAT 1 cut(s) 1080
BsaHI GRCGYC 1 cut(s) 1056
BsaJI CCNNGG 4 cut(s) 67, 629, 630, 826
BsaXI ACNNNNNCTCC 2 cut(s) 365, 395
Bsc4I CCNNNNNNNGG 3 cut(s) 88, 227, 514
Bse1I ACTGG 3 cut(s) 527, 927, 1028
Bse3DI GCAATG 2 cut(s) 122, 447
BseBI CCWGG 3 cut(s) 68, 464, 631
BseCI ATCGAT 1 cut(s) 1080
BseDI CCNNGG 4 cut(s) 67, 629, 630, 826
BseGI GGATG 2 cut(s) 582, 879
BseLI CCNNNNNNNGG 3 cut(s) 88, 227, 514
BseMI GCAATG 2 cut(s) 122, 447
BseMII CTCAG 3 cut(s) 252, 343, 1102
BseNI ACTGG 3 cut(s) 527, 927, 1028
BseXI GCAGC 2 cut(s) 269, 975
BseYI CCCAGC 1 cut(s) 697
Bsh1236I CGCG 4 cut(s) 828, 888, 957, 1037
BshFI GGCC 6 cut(s) 188, 482, 770, 783, 905, 1009
BshVI ATCGAT 1 cut(s) 1080
BslFI GGGAC 2 cut(s) 86, 827
BslI CCNNNNNNNGG 3 cut(s) 88, 227, 514
BsmAI GTCTC 3 cut(s) 347, 389, 483
BsmFI GGGAC 2 cut(s) 86, 827
BsmI GAATGC 1 cut(s) 1068
BsnI GGCC 6 cut(s) 188, 482, 770, 783, 905, 1009
Bsp1286I GDGCHC 1 cut(s) 203
Bsp1407I TGTACA 1 cut(s) 743
Bsp143I GATC 9 cut(s) 180, 519, 615, 681, 706, 822, 850, 1077, 1099
Bsp68I TCGCGA 2 cut(s) 888, 957
BspACI CCGC 7 cut(s) 4, 701, 826, 828, 902, 982, 1037
BspANI GGCC 6 cut(s) 188, 482, 770, 783, 905, 1009
BspCNI CTCAG 3 cut(s) 253, 342, 1101
BspDI ATCGAT 1 cut(s) 1080
BspFNI CGCG 4 cut(s) 828, 888, 957, 1037
BspLI GGNNCC 2 cut(s) 102, 153
BspPI GGATC 6 cut(s) 188, 514, 689, 817, 858, 1094
BsrDI GCAATG 2 cut(s) 122, 447
BsrGI TGTACA 1 cut(s) 743
BsrI ACTGG 3 cut(s) 527, 927, 1028
BssECI CCNNGG 4 cut(s) 67, 629, 630, 826
BssMI GATC 9 cut(s) 180, 519, 615, 681, 706, 822, 850, 1077, 1099
BssNI GRCGYC 1 cut(s) 1056
Bst2UI CCWGG 3 cut(s) 68, 464, 631
Bst4CI ACNGT 2 cut(s) 931, 1108
BstACI GRCGYC 1 cut(s) 1056
BstAUI TGTACA 1 cut(s) 743
BstC8I GCNNGC 8 cut(s) 118, 199, 315, 580, 890, 959, 986, 1002
BstDEI CTNAG 3 cut(s) 261, 329, 1088
BstDSI CCRYGG 1 cut(s) 826
BstF5I GGATG 2 cut(s) 582, 879
BstFNI CGCG 4 cut(s) 828, 888, 957, 1037
BstH2I RGCGCY 1 cut(s) 982
BstHHI GCGC 4 cut(s) 894, 963, 981, 1068
BstKTI GATC 9 cut(s) 183, 522, 618, 684, 709, 825, 853, 1080, 1102
BstMAI GTCTC 3 cut(s) 347, 389, 483
BstMBI GATC 9 cut(s) 180, 519, 615, 681, 706, 822, 850, 1077, 1099
BstMWI GCNNNNNNNGC 7 cut(s) 13, 194, 263, 923, 985, 997, 1006
BstNI CCWGG 3 cut(s) 68, 464, 631
BstNSI RCATGY 4 cut(s) 317, 408, 427, 444
BstSCI CCNGG 3 cut(s) 66, 462, 629
BstSFI CTRYAG 2 cut(s) 927, 1104
BstUI CGCG 4 cut(s) 828, 888, 957, 1037
BstV1I GCAGC 2 cut(s) 269, 975
BstV2I GAAGAC 2 cut(s) 114, 1124
BstX2I RGATCY 3 cut(s) 519, 822, 1099
BstYI RGATCY 3 cut(s) 519, 822, 1099
Bsu15I ATCGAT 1 cut(s) 1080
BsuRI GGCC 6 cut(s) 188, 482, 770, 783, 905, 1009
BsuTUI ATCGAT 1 cut(s) 1080
BtgI CCRYGG 1 cut(s) 826
BtrI CACGTC 1 cut(s) 865
BtsCI GGATG 2 cut(s) 582, 879
BtsIMutI CAGTG 2 cut(s) 338, 534
BtuMI TCGCGA 2 cut(s) 888, 957
Cac8I GCNNGC 8 cut(s) 118, 199, 315, 580, 890, 959, 986, 1002
CaiI CAGNNNCTG 1 cut(s) 260
CfoI GCGC 4 cut(s) 894, 963, 981, 1068
Cfr13I GGNCC 3 cut(s) 100, 790, 1039
Cfr42I CCGCGG 1 cut(s) 829
ClaI ATCGAT 1 cut(s) 1080
Csp6I GTAC 5 cut(s) 209, 394, 592, 744, 877
CviAII CATG 6 cut(s) 314, 405, 424, 441, 996, 1019
CviQI GTAC 5 cut(s) 209, 394, 592, 744, 877
DdeI CTNAG 3 cut(s) 261, 329, 1088
DpnI GATC 9 cut(s) 182, 521, 617, 683, 708, 824, 852, 1079, 1101
DpnII GATC 9 cut(s) 180, 519, 615, 681, 706, 822, 850, 1077, 1099
DraI TTTAAA 1 cut(s) 739
EaeI YGGCCR 1 cut(s) 903
Eco147I AGGCCT 3 cut(s) 188, 770, 1009
Eco24I GRGCYC 1 cut(s) 203
Eco47I GGWCC 3 cut(s) 100, 790, 1039
Eco57I CTGAAG 1 cut(s) 126
EcoO109I RGGNCCY 2 cut(s) 100, 790
EcoRII CCWGG 3 cut(s) 66, 462, 629
EcoT22I ATGCAT 1 cut(s) 446
EcoT38I GRGCYC 1 cut(s) 203
FaeI CATG 6 cut(s) 317, 408, 427, 444, 999, 1022
FaqI GGGAC 2 cut(s) 86, 827
FatI CATG 6 cut(s) 313, 404, 423, 440, 995, 1018
FauI CCCGC 1 cut(s) 694
FbaI TGATCA 1 cut(s) 706
FblI GTMKAC 1 cut(s) 1110
Fnu4HI GCNGC 5 cut(s) 5, 258, 903, 982, 989
FokI GGATG 2 cut(s) 569, 866
FriOI GRGCYC 1 cut(s) 203
Fsp4HI GCNGC 5 cut(s) 5, 258, 903, 982, 989
FspBI CTAG 5 cut(s) 206, 564, 785, 797, 1043
GlaI GCGC 4 cut(s) 893, 962, 980, 1067
GluI GCNGC 5 cut(s) 5, 258, 903, 982, 989
GsaI CCCAGC 1 cut(s) 701
HaeII RGCGCY 1 cut(s) 982
HaeIII GGCC 6 cut(s) 188, 482, 770, 783, 905, 1009
HhaI GCGC 4 cut(s) 894, 963, 981, 1068
Hin1I GRCGYC 1 cut(s) 1056
Hin1II CATG 6 cut(s) 317, 408, 427, 444, 999, 1022
Hin6I GCGC 4 cut(s) 892, 961, 979, 1066
HinP1I GCGC 4 cut(s) 892, 961, 979, 1066
HinfI GANTC 3 cut(s) 93, 833, 1120
HphI GGTGA 3 cut(s) 497, 716, 842
Hpy166II GTNNAC 2 cut(s) 281, 1111
Hpy188I TCNGA 4 cut(s) 87, 488, 822, 1091
Hpy188III TCNNGA 7 cut(s) 19, 164, 654, 689, 848, 887, 956
Hpy8I GTNNAC 2 cut(s) 281, 1111
Hpy99I CGWCG 2 cut(s) 1037, 1061
HpyAV CCTTC 5 cut(s) 296, 442, 526, 854, 1002
HpyCH4III ACNGT 2 cut(s) 931, 1108
HpyCH4IV ACGT 3 cut(s) 816, 864, 1056
HpyCH4V TGCA 3 cut(s) 127, 444, 625
HpyF10VI GCNNNNNNNGC 7 cut(s) 13, 194, 263, 923, 985, 997, 1006
HpyF3I CTNAG 3 cut(s) 261, 329, 1088
HpySE526I ACGT 3 cut(s) 816, 864, 1056
Hsp92I GRCGYC 1 cut(s) 1056
Hsp92II CATG 6 cut(s) 317, 408, 427, 444, 999, 1022
HspAI GCGC 4 cut(s) 892, 961, 979, 1066
Ksp22I TGATCA 1 cut(s) 706
KspI CCGCGG 1 cut(s) 829
Kzo9I GATC 9 cut(s) 180, 519, 615, 681, 706, 822, 850, 1077, 1099
LmnI GCTCC 2 cut(s) 151, 846
Lsp1109I GCAGC 2 cut(s) 269, 975
LweI GCATC 2 cut(s) 453, 591
MaeI CTAG 5 cut(s) 206, 564, 785, 797, 1043
MaeII ACGT 3 cut(s) 816, 864, 1056
MaeIII GTNAC 1 cut(s) 830
MalI GATC 9 cut(s) 182, 521, 617, 683, 708, 824, 852, 1079, 1101
MboI GATC 9 cut(s) 180, 519, 615, 681, 706, 822, 850, 1077, 1099
MboII GAAGA 2 cut(s) 119, 1129
MfeI CAATTG 2 cut(s) 728, 1050
MflI RGATCY 3 cut(s) 519, 822, 1099
MhlI GDGCHC 1 cut(s) 203
MluCI AATT 7 cut(s) 242, 728, 800, 854, 895, 1050, 1138
MlyI GAGTC 2 cut(s) 827, 1114
MmeI TCCRAC 1 cut(s) 495
MnlI CCTC 9 cut(s) 81, 91, 160, 256, 292, 338, 760, 781, 894
Mph1103I ATGCAT 1 cut(s) 446
MseI TTAA 2 cut(s) 738, 1136
MspA1I CMGCKG 3 cut(s) 260, 701, 828
MspR9I CCNGG 3 cut(s) 68, 464, 631
MunI CAATTG 2 cut(s) 728, 1050
Mva1269I GAATGC 1 cut(s) 1068
MvaI CCWGG 3 cut(s) 68, 464, 631
MvnI CGCG 4 cut(s) 828, 888, 957, 1037
MwoI GCNNNNNNNGC 7 cut(s) 13, 194, 263, 923, 985, 997, 1006
NdeII GATC 9 cut(s) 180, 519, 615, 681, 706, 822, 850, 1077, 1099
NlaIII CATG 6 cut(s) 317, 408, 427, 444, 999, 1022
NlaIV GGNNCC 2 cut(s) 102, 153
NmuCI GTSAC 1 cut(s) 830
NruI TCGCGA 2 cut(s) 888, 957
NsiI ATGCAT 1 cut(s) 446
NspI RCATGY 4 cut(s) 317, 408, 427, 444
PaeI GCATGC 1 cut(s) 317
PasI CCCWGGG 1 cut(s) 630
PceI AGGCCT 3 cut(s) 188, 770, 1009
PciI ACATGT 1 cut(s) 423
PcsI WCGNNNNNNNCGW 1 cut(s) 291
PctI GAATGC 1 cut(s) 1068
PfeI GAWTC 1 cut(s) 93
PkrI GCNGC 5 cut(s) 6, 259, 904, 983, 990
PleI GAGTC 2 cut(s) 827, 1114
PpsI GAGTC 2 cut(s) 827, 1114
PpuMI RGGWCCY 2 cut(s) 100, 790
PscI ACATGT 1 cut(s) 423
Psp5II RGGWCCY 2 cut(s) 100, 790
Psp6I CCWGG 3 cut(s) 66, 462, 629
PspFI CCCAGC 1 cut(s) 697
PspGI CCWGG 3 cut(s) 66, 462, 629
PspN4I GGNNCC 2 cut(s) 102, 153
PspPI GGNCC 3 cut(s) 100, 790, 1039
PspPPI RGGWCCY 2 cut(s) 100, 790
PsrI GAACNNNNNNTAC 2 cut(s) 801, 833
PstNI CAGNNNCTG 1 cut(s) 260
PsuI RGATCY 3 cut(s) 519, 822, 1099
PvuII CAGCTG 1 cut(s) 260
RruI TCGCGA 2 cut(s) 888, 957
RsaI GTAC 5 cut(s) 210, 395, 593, 745, 878
RsaNI GTAC 5 cut(s) 209, 394, 592, 744, 877
SacII CCGCGG 1 cut(s) 829
SaqAI TTAA 2 cut(s) 738, 1136
SatI GCNGC 5 cut(s) 5, 258, 903, 982, 989
Sau3AI GATC 9 cut(s) 180, 519, 615, 681, 706, 822, 850, 1077, 1099
Sau96I GGNCC 3 cut(s) 100, 790, 1039
ScaI AGTACT 1 cut(s) 210
SchI GAGTC 2 cut(s) 827, 1114
ScrFI CCNGG 3 cut(s) 68, 464, 631
SduI GDGCHC 1 cut(s) 203
SfaNI GCATC 2 cut(s) 453, 591
SfcI CTRYAG 2 cut(s) 927, 1104
Sfr303I CCGCGG 1 cut(s) 829
SgrBI CCGCGG 1 cut(s) 829
SinI GGWCC 3 cut(s) 100, 790, 1039
SmlI CTYRAG 2 cut(s) 17, 652
SmoI CTYRAG 2 cut(s) 17, 652
SpeI ACTAGT 1 cut(s) 205
SphI GCATGC 1 cut(s) 317
Sse9I AATT 7 cut(s) 242, 728, 800, 854, 895, 1050, 1138
SseBI AGGCCT 3 cut(s) 188, 770, 1009
SsiI CCGC 7 cut(s) 4, 701, 826, 828, 902, 982, 1037
SspMI CTAG 5 cut(s) 206, 564, 785, 797, 1043
StuI AGGCCT 3 cut(s) 188, 770, 1009
StyD4I CCNGG 3 cut(s) 66, 462, 629
TaaI ACNGT 2 cut(s) 931, 1108
TaiI ACGT 3 cut(s) 819, 867, 1059
TaqI TCGA 6 cut(s) 96, 174, 858, 975, 1059, 1080
TaqII GACCGA 1 cut(s) 359
TasI AATT 7 cut(s) 242, 728, 800, 854, 895, 1050, 1138
TatI WGTACW 4 cut(s) 208, 393, 743, 876
TauI GCSGC 3 cut(s) 7, 905, 984
TfiI GAWTC 1 cut(s) 93
Tru1I TTAA 2 cut(s) 738, 1136
Tru9I TTAA 2 cut(s) 738, 1136
TscAI CASTG 2 cut(s) 345, 534
TseFI GTSAC 1 cut(s) 830
TseI GCWGC 2 cut(s) 257, 988
Tsp45I GTSAC 1 cut(s) 830
TspDTI ATGAA 4 cut(s) 38, 64, 984, 1035
TspGWI ACGGA 1 cut(s) 1062
TspRI CASTG 2 cut(s) 345, 534
VpaK11BI GGWCC 3 cut(s) 100, 790, 1039
XceI RCATGY 4 cut(s) 317, 408, 427, 444
XmiI GTMKAC 1 cut(s) 1110
XspI CTAG 5 cut(s) 206, 564, 785, 797, 1043
ZraI GACGTC 1 cut(s) 1057
ZrmI AGTACT 1 cut(s) 210
Zsp2I ATGCAT 1 cut(s) 446
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.