Rorug04G0063900

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000160
Physical Location & Seq
Forward (+)
9930546 .. 9933612
3067 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0063900.1

Sequence Viewer

Length: 1671 bp
ATGATTTACACATCAATTTCTTATGAGAATCCATGGGCAGCAGCAATCAATCCAAAAGTGATGAAGCTTTCAAGAAAGCAACCACAACATCCTTTTCACTTAAAACCCATCATTCGTTGTCACCGCCAAAACCCAGATAACACCACCATACACAACCCCAAACCACCCAAAATCCAGCTCAAAGATCCCATCTTGGTCACCCCAACAACGACTCAAGTTGTTTACAGAACAGCCAAGAAAAACAGGGCCAATGTGGAAAGGAAAGGCCTTCCCAAATTGGGAAGTCAACAAATGATGATTTTGTGTGGATTTGGGTATTGGGTTCAAGGCTTTAGGTGCTTTCCGTGGTTGGCTTTGAACTTTCACATGGCTCACAATCTTAATATGCACCCTTCAATATTGCAACTTGTACAACATTCTGGTAATCTTCCCATGGTGGCTAAGCCCTTGTATGGACTCCTCTCTGATGCTTTTTATATTGGTGGTGCTCATAGAATTCCTTATGTTTCCATTGGAGTTCTTCTACAGGTCCTGTCTTGGGGATCACTGGCTCTGGTTCCAGTTGCAGCTAAGGCCCTTCCAACCCTTATGGCATGTGTTCTTCTCAGTAATCTTGGAGCATCAATTACAGAAGTAGCAAAGGATGCTCTTGTTGCAGAATATGGCCAGCAACACAGGATGAAAGGCCTCCAGTCTTATGCATTCATGGCATTAGCTGCCGGTGGAATCCTTGGGAACTTAGTAGGTGGATATTTCTTAATGAAAGCACCACCCCGAACCATGTTTCTCCTGTTTTCGGTTTTACTTTCCGCTCAACTTGCAATTTCATCGAGAATAAGAGAGGAATCTCTTGGTTTACCACAATTGTCAGACCAGAGTCTTGCAGGGAAACCAATCTTGGAAAGTCTTAGGAAACAATTGTCGGATCTAATGATGGGAATTCAAGAGCAAAGCCTTGTTCATCCACTTACTTGGATTGTAGCTTCTATTGCCATGGTCCCGGTTCTGTCAGGTTCCATCTTTTGCTATCAAACACAATGTCTAAATCTTGATCCTTCGGTCATTGGCATGTCTCGAGTGATTGGCCAGTTGATGCTTCTTTCCACTACCGTACTTTACGACCGTTATTGGAAACATGTTCCAATGAGGAAGTTGGTTGGTATTGTGCAGTTCGTGTATGCCTTCTCCCTTCTTCTCGACTTTGTTTTAGTAAGACAGATCAATCTCAGACTGGGGATTCCGAATGAGGTTTTTGTTCTTTGTTTTTCGGGATTGGCAGAAACAATTGCACAGTTCAAGCTCTTACCTTTCTCAGTCCTGTTTGCCCATTTATGTCCTCGAGGTTGTGAAGGATCTCTCACTGCTTTCTTAGCTTCAGCCTTGATTTTTTCATCAATAGTTAGCGGGTTTTTAGGTGTTGGATTGGCTTCTCTGATTGGAGTAACAGCTGGTGACTACTCAAGCCTGCCTTTGGGGATTCTGGTACAGTTTCTTGCGGCTTTACTTCCCTTGGGATGGATTCATCATTTACCCGCGTCAGAAGCTATTGTTGGGAAGGAGAGGAAAAAAAGTTTAAGTAGGAGGAGTCAGAAAAATAGAAGGGTTGGTAGAGTGGTTTATGATTCTGTATATATCTACAGGCGAGAGAGAGAATCAGAAGCAGAGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 Retrotrans_gag rve

Protein Analysis

556

Amino Acids

61.46

Weight (kDa)

9.78

Isoelectric Point (pI)

34.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BT1 PF03092 109 - 524 9.2e-117 BT1 family
MFS_1 PF07690 115 - 399 6.1e-09 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000160)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g11612 FvH4_2g25851 FvH4_3g22802 FvH4_3g22805 FvH4_3g31361 FvH4_3g31382 FvH4_4g05272 FvH4_4g05273 FvH4_4g14567 FvH4_4g15161 FvH4_5g22540 FvH4_6g13113 FvH4_6g31923 FvH4_6g31924 FvH4_6g33651 FvH4_6g45122 FvH4_7g03662
pyrus_communis pycom01g04240 pycom01g24010 pycom02g18210 pycom02g19420 pycom05g06510 pycom09g15750 pycom09g18940 pycom12g02580 pycom12g03100 pycom12g08310 pycom13g22710 pycom13g28060 pycom16g18340 pycom16g18350 pycom16g24880 pycom16g26240 pycom461g00260 pycom520g00980 pycom520g01320
rosa_chinensis RchiOBHm_Chr1g0320731 RchiOBHm_Chr2g0102771 RchiOBHm_Chr3g0462151 RchiOBHm_Chr5g0038141 RchiOBHm_Chr5g0069371 RchiOBHm_Chr7g0239101
rosa_multiflora Rmu_co8038252.1_g000001 Rmu_co8138412.1_g000001 Rmu_co8331087.1_g000001 Rmu_co8479311.1_g000001 Rmu_sc0000112.1_g000018 Rmu_sc0000346.1_g000012 Rmu_sc0002102.1_g000002 Rmu_sc0003505.1_g000013 Rmu_sc0004249.1_g000007 Rmu_sc0004448.1_g000010 Rmu_sc0004594.1_g000011 Rmu_sc0004915.1_g000010 Rmu_sc0008019.1_g000019 Rmu_sc0008303.1_g000001 Rmu_sc0008355.1_g000005 Rmu_sc0009253.1_g000018 Rmu_sc0010211.1_g000002 Rmu_sc0010252.1_g000009 Rmu_sc0011534.1_g000008 Rmu_sc0014811.1_g000009 Rmu_sc0019475.1_g000001 Rmu_sc0024897.1_g000001 Rmu_sc0024898.1_g000001 Rmu_sc0031791.1_g000001 Rmu_sc0038715.1_g000001
rosa_roxburghii Rroxscaffold_165G00436940 Rroxscaffold_174G00435270 Rroxscaffold_177G00434330 Rroxscaffold_177G00434340 Rroxscaffold_177G00434350 Rroxscaffold_1G00002160 Rroxscaffold_1G00025260 Rroxscaffold_1G00042950 Rroxscaffold_1G00068010 Rroxscaffold_2G00107530 Rroxscaffold_3G00221190 Rroxscaffold_3G00221520 Rroxscaffold_3G00223200 Rroxscaffold_4G00322230 Rroxscaffold_4G00331810 Rroxscaffold_5G00385150 Rroxscaffold_5G00387510 Rroxscaffold_6G00410520 Rroxscaffold_6G00423360 Rroxscaffold_6G00423370 Rroxscaffold_6G00429210 Rroxscaffold_7G00158300 Rroxscaffold_7G00163480 Rroxscaffold_7G00171410 Rroxscaffold_7G00178940 Rroxscaffold_7G00199480 Rroxscaffold_7G00205630 Rroxscaffold_7G00207440
rosa_rugosa Rorug01G0056400 Rorug04G0063900 Rorug05G0251400 Rorug07G0221900
rosa_samantha Rh1DG169400 Rh2AG292900 Rh2DG519200 Rh4DG260600 Rh5AG042600 Rh6BG117500
rosa_wichuraiana Rw0G001900 Rw0G005150 Rw0G006380 Rw0G015140 Rw0G016320 Rw0G019440 Rw0G019840 Rw0G023740 Rw1G001590 Rw1G002180 Rw1G003560 Rw1G004280 Rw1G006110 Rw1G006680 Rw1G007920 Rw1G008480 Rw1G009120 Rw1G010310 Rw1G014900 Rw1G019650 Rw1G022070 Rw1G022170 Rw1G041570 Rw2G002740 Rw2G005760 Rw2G032370 Rw2G046770 Rw2G050600 Rw2G051420 Rw3G015930 Rw3G016280 Rw3G019580 Rw3G028420 Rw4G003430 Rw4G005350 Rw4G007530 Rw4G008150 Rw4G009580 Rw4G010250 Rw4G015800 Rw4G017000 Rw4G017910 Rw4G018510 Rw4G019700 Rw4G031010 Rw5G012650 Rw5G020140 Rw5G022060 Rw5G034420 Rw5G035560 Rw5G043010 Rw5G046750 Rw5G047340 Rw5G049500 Rw6G001390 Rw6G002210 Rw6G004530 Rw6G004770 Rw6G005100 Rw6G005890 Rw6G011860 Rw6G014680 Rw6G019480 Rw6G028970 Rw6G033800 Rw7G013050 Rw7G014800 Rw7G025760 Rw7G025850 Rw7G026730 Rw7G026870 Rw7G036330 Rw7G036430 Rw7G039320 Rw7G039510 Rw7G039560 Rw7G041370 Rw7G042050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 1338
AccBSI CCGCTC 1 cut(s) 812
AccII CGCG 1 cut(s) 1535
AciI CCGC 5 cut(s) 124, 810, 1404, 1496, 1533
AclWI GGATC 5 cut(s) 179, 550, 933, 1046, 1360
AcoI YGGCCR 2 cut(s) 664, 1084
AcsI RAATTY 2 cut(s) 495, 939
AcuI CTGAAG 1 cut(s) 1359
AfaI GTAC 3 cut(s) 411, 1113, 1485
AfiI CCNNNNNNNGG 6 cut(s) 278, 452, 538, 796, 1471, 1515
AflIII ACRYGT 1 cut(s) 1135
AgsI TTSAA 6 cut(s) 72, 326, 358, 396, 944, 1297
AjuI GAANNNNNNNTTGG 4 cut(s) 881, 913, 1533, 1565
AluBI AGCT 9 cut(s) 67, 178, 569, 716, 983, 1300, 1373, 1448, 1544
AluI AGCT 9 cut(s) 67, 178, 569, 716, 983, 1300, 1373, 1448, 1544
Alw21I GWGCWC 1 cut(s) 490
Alw26I GTCTC 1 cut(s) 1077
AlwI GGATC 5 cut(s) 179, 550, 933, 1046, 1360
AlwNI CAGNNNCTG 1 cut(s) 532
Ama87I CYCGRG 2 cut(s) 1074, 1338
AoxI GGCC 6 cut(s) 246, 265, 573, 664, 685, 1084
ApeKI GCWGC 4 cut(s) 38, 41, 566, 716
ApoI RAATTY 2 cut(s) 495, 939
ArsI GACNNNNNNTTYG 2 cut(s) 1024, 1056
AspS9I GGNCC 4 cut(s) 246, 529, 574, 997
AsuC2I CCSGG 1 cut(s) 1001
AsuHPI GGTGA 3 cut(s) 113, 190, 1463
AvaI CYCGRG 2 cut(s) 1074, 1338
AvaII GGWCC 2 cut(s) 529, 997
BalI TGGCCA 2 cut(s) 666, 1086
Bbv12I GWGCWC 1 cut(s) 490
BbvI GCAGC 4 cut(s) 50, 53, 578, 703
BccI CCATC 5 cut(s) 116, 197, 928, 1025, 1509
BcgI CGANNNNNNTGC 2 cut(s) 810, 844
BcnI CCSGG 1 cut(s) 1001
BcoDI GTCTC 1 cut(s) 1077
BfmI CTRYAG 2 cut(s) 524, 1636
BisI GCNGC 5 cut(s) 39, 42, 567, 717, 1497
BlpI GCTNAGC 1 cut(s) 441
BlsI GCNGC 5 cut(s) 40, 43, 568, 718, 1498
Bme1390I CCNGG 1 cut(s) 1001
Bme18I GGWCC 2 cut(s) 529, 997
BmeT110I CYCGRG 2 cut(s) 1074, 1338
BmgT120I GGNCC 4 cut(s) 246, 529, 574, 997
BmiI GGNNCC 3 cut(s) 558, 999, 1015
BmrFI CCNGG 1 cut(s) 1001
BmrI ACTGGG 1 cut(s) 1241
BmsI GCATC 4 cut(s) 457, 629, 634, 1083
BmuI ACTGGG 1 cut(s) 1241
BoxI GACNNNNGTC 1 cut(s) 876
BpmI CTGGAG 1 cut(s) 674
Bpu10I CCTNAGC 1 cut(s) 570
Bpu1102I GCTNAGC 1 cut(s) 441
BpuEI CTTGAG 2 cut(s) 198, 1444
BpuMI CCSGG 1 cut(s) 1001
BsaJI CCNNGG 6 cut(s) 32, 344, 432, 730, 993, 1509
Bsc4I CCNNNNNNNGG 6 cut(s) 278, 452, 538, 796, 1471, 1515
Bse118I RCCGGY 1 cut(s) 719
Bse1I ACTGG 5 cut(s) 552, 560, 691, 1087, 1236
BseDI CCNNGG 6 cut(s) 32, 344, 432, 730, 993, 1509
BseGI GGATG 5 cut(s) 88, 649, 684, 961, 1520
BseLI CCNNNNNNNGG 6 cut(s) 278, 452, 538, 796, 1471, 1515
BseMII CTCAG 3 cut(s) 619, 1240, 1326
BseNI ACTGG 5 cut(s) 552, 560, 691, 1087, 1236
BseRI GAGGAG 2 cut(s) 449, 1597
BseXI GCAGC 4 cut(s) 50, 53, 578, 703
BsgI GTGCAG 1 cut(s) 1187
Bsh1236I CGCG 1 cut(s) 1535
Bsh1285I CGRYCG 1 cut(s) 1123
BshFI GGCC 6 cut(s) 248, 267, 575, 666, 687, 1086
BsiEI CGRYCG 1 cut(s) 1123
BsiHKAI GWGCWC 1 cut(s) 490
BsiHKCI CYCGRG 2 cut(s) 1074, 1338
BsiSI CCGG 2 cut(s) 720, 1001
BslFI GGGAC 1 cut(s) 983
BslI CCNNNNNNNGG 6 cut(s) 278, 452, 538, 796, 1471, 1515
BsmAI GTCTC 1 cut(s) 1077
BsmFI GGGAC 1 cut(s) 983
BsmI GAATGC 1 cut(s) 701
BsnI GGCC 6 cut(s) 248, 267, 575, 666, 687, 1086
BsoBI CYCGRG 2 cut(s) 1074, 1338
Bsp1286I GDGCHC 1 cut(s) 490
Bsp1407I TGTACA 1 cut(s) 409
Bsp143I GATC 6 cut(s) 184, 542, 925, 1051, 1218, 1352
Bsp1720I GCTNAGC 1 cut(s) 441
Bsp19I CCATGG 3 cut(s) 32, 432, 993
BspACI CCGC 5 cut(s) 124, 810, 1404, 1496, 1533
BspANI GGCC 6 cut(s) 248, 267, 575, 666, 687, 1086
BspCNI CTCAG 3 cut(s) 618, 1239, 1325
BspFNI CGCG 1 cut(s) 1535
BspLI GGNNCC 3 cut(s) 558, 999, 1015
BspPI GGATC 5 cut(s) 179, 550, 933, 1046, 1360
BsrBI CCGCTC 1 cut(s) 812
BsrFI RCCGGY 1 cut(s) 719
BsrGI TGTACA 1 cut(s) 409
BsrI ACTGG 5 cut(s) 552, 560, 691, 1087, 1236
BssAI RCCGGY 1 cut(s) 719
BssECI CCNNGG 6 cut(s) 32, 344, 432, 730, 993, 1509
BssMI GATC 6 cut(s) 184, 542, 925, 1051, 1218, 1352
BssT1I CCWWGG 5 cut(s) 32, 432, 730, 993, 1509
Bst4CI ACNGT 4 cut(s) 1111, 1124, 1293, 1488
BstAPI GCANNNNNTGC 2 cut(s) 644, 716
BstAUI TGTACA 1 cut(s) 409
BstC8I GCNNGC 2 cut(s) 668, 1466
BstDEI CTNAG 8 cut(s) 441, 570, 605, 739, 908, 1226, 1312, 1369
BstDSI CCRYGG 4 cut(s) 32, 344, 432, 993
BstEII GGTNACC 1 cut(s) 196
BstF5I GGATG 5 cut(s) 88, 649, 684, 961, 1520
BstFNI CGCG 1 cut(s) 1535
BstKTI GATC 6 cut(s) 187, 545, 928, 1054, 1221, 1355
BstMAI GTCTC 1 cut(s) 1077
BstMBI GATC 6 cut(s) 184, 542, 925, 1051, 1218, 1352
BstMCI CGRYCG 1 cut(s) 1123
BstNSI RCATGY 3 cut(s) 597, 1072, 1139
BstPAI GACNNNNGTC 1 cut(s) 876
BstPI GGTNACC 1 cut(s) 196
BstSCI CCNGG 1 cut(s) 999
BstSFI CTRYAG 2 cut(s) 524, 1636
BstUI CGCG 1 cut(s) 1535
BstV1I GCAGC 4 cut(s) 50, 53, 578, 703
BstX2I RGATCY 3 cut(s) 184, 925, 1352
BstXI CCANNNNNNTGG 1 cut(s) 972
BstYI RGATCY 3 cut(s) 184, 925, 1352
BsuRI GGCC 6 cut(s) 248, 267, 575, 666, 687, 1086
BtgI CCRYGG 4 cut(s) 32, 344, 432, 993
BtsCI GGATG 5 cut(s) 88, 649, 684, 961, 1520
BtsI GCAGTG 1 cut(s) 1359
BtsIMutI CAGTG 2 cut(s) 545, 1359
Cac8I GCNNGC 2 cut(s) 668, 1466
CaiI CAGNNNCTG 1 cut(s) 532
Cfr10I RCCGGY 1 cut(s) 719
Cfr13I GGNCC 4 cut(s) 246, 529, 574, 997
CseI GACGC 1 cut(s) 1524
Csp6I GTAC 3 cut(s) 410, 1112, 1484
CviAII CATG 9 cut(s) 33, 367, 433, 594, 706, 781, 994, 1069, 1136
CviQI GTAC 3 cut(s) 410, 1112, 1484
DdeI CTNAG 8 cut(s) 441, 570, 605, 739, 908, 1226, 1312, 1369
DpnI GATC 6 cut(s) 186, 544, 927, 1053, 1220, 1354
DpnII GATC 6 cut(s) 184, 542, 925, 1051, 1218, 1352
EaeI YGGCCR 2 cut(s) 664, 1084
Eco130I CCWWGG 5 cut(s) 32, 432, 730, 993, 1509
Eco147I AGGCCT 2 cut(s) 267, 687
Eco47I GGWCC 2 cut(s) 529, 997
Eco57I CTGAAG 1 cut(s) 1359
Eco88I CYCGRG 2 cut(s) 1074, 1338
Eco91I GGTNACC 1 cut(s) 196
EcoO109I RGGNCCY 2 cut(s) 529, 574
EcoO65I GGTNACC 1 cut(s) 196
EcoRI GAATTC 2 cut(s) 495, 939
EcoT14I CCWWGG 5 cut(s) 32, 432, 730, 993, 1509
EcoT22I ATGCAT 1 cut(s) 703
ErhI CCWWGG 5 cut(s) 32, 432, 730, 993, 1509
FaeI CATG 9 cut(s) 36, 370, 436, 597, 709, 784, 997, 1072, 1139
FalI AAGNNNNNCTT 2 cut(s) 1453, 1485
FaqI GGGAC 1 cut(s) 983
FatI CATG 9 cut(s) 32, 366, 432, 593, 705, 780, 993, 1068, 1135
FauI CCCGC 2 cut(s) 1397, 1540
Fnu4HI GCNGC 5 cut(s) 39, 42, 567, 717, 1497
FokI GGATG 5 cut(s) 75, 656, 691, 948, 1527
Fsp4HI GCNGC 5 cut(s) 39, 42, 567, 717, 1497
GluI GCNGC 5 cut(s) 39, 42, 567, 717, 1497
GsuI CTGGAG 1 cut(s) 674
HaeIII GGCC 6 cut(s) 248, 267, 575, 666, 687, 1086
HapII CCGG 2 cut(s) 720, 1001
HgaI GACGC 1 cut(s) 1524
Hin1II CATG 9 cut(s) 36, 370, 436, 597, 709, 784, 997, 1072, 1139
HincII GTYRAC 1 cut(s) 287
HindII GTYRAC 1 cut(s) 287
HindIII AAGCTT 1 cut(s) 65
HpaII CCGG 2 cut(s) 720, 1001
HphI GGTGA 3 cut(s) 113, 190, 1463
Hpy166II GTNNAC 3 cut(s) 223, 287, 857
Hpy188I TCNGA 9 cut(s) 466, 871, 925, 1229, 1242, 1434, 1540, 1590, 1657
Hpy188III TCNNGA 7 cut(s) 72, 831, 944, 1049, 1074, 1196, 1269
Hpy8I GTNNAC 3 cut(s) 223, 287, 857
HpyAV CCTTC 9 cut(s) 278, 402, 587, 1065, 1192, 1199, 1343, 1549, 1593
HpyCH4III ACNGT 4 cut(s) 1111, 1124, 1293, 1488
HpyCH4V TGCA 9 cut(s) 388, 403, 566, 656, 701, 821, 884, 1168, 1289
HpyF3I CTNAG 8 cut(s) 441, 570, 605, 739, 908, 1226, 1312, 1369
Hsp92II CATG 9 cut(s) 36, 370, 436, 597, 709, 784, 997, 1072, 1139
Kzo9I GATC 6 cut(s) 184, 542, 925, 1051, 1218, 1352
LmnI GCTCC 1 cut(s) 617
Lsp1109I GCAGC 4 cut(s) 50, 53, 578, 703
LweI GCATC 4 cut(s) 457, 629, 634, 1083
MaeIII GTNAC 4 cut(s) 119, 196, 1441, 1451
MalI GATC 6 cut(s) 186, 544, 927, 1053, 1220, 1354
MbiI CCGCTC 1 cut(s) 812
MboI GATC 6 cut(s) 184, 542, 925, 1051, 1218, 1352
MboII GAAGA 4 cut(s) 419, 512, 593, 1184
MfeI CAATTG 3 cut(s) 863, 917, 1284
MflI RGATCY 3 cut(s) 184, 925, 1352
MhlI GDGCHC 1 cut(s) 490
MlsI TGGCCA 2 cut(s) 666, 1086
MluCI AATT 9 cut(s) 15, 275, 495, 624, 822, 863, 917, 939, 1284
MluNI TGGCCA 2 cut(s) 666, 1086
MlyI GAGTC 4 cut(s) 205, 450, 886, 1594
MmeI TCCRAC 3 cut(s) 605, 903, 1399
MnlI CCTC 9 cut(s) 470, 698, 835, 1140, 1240, 1334, 1347, 1554, 1575
Mox20I TGGCCA 2 cut(s) 666, 1086
Mph1103I ATGCAT 1 cut(s) 703
MscI TGGCCA 2 cut(s) 666, 1086
MseI TTAA 4 cut(s) 101, 381, 758, 1574
MslI CAYNNNNRTG 1 cut(s) 1067
Msp20I TGGCCA 2 cut(s) 666, 1086
MspA1I CMGCKG 1 cut(s) 1448
MspI CCGG 2 cut(s) 720, 1001
MspR9I CCNGG 1 cut(s) 1001
MunI CAATTG 3 cut(s) 863, 917, 1284
Mva1269I GAATGC 1 cut(s) 701
MvnI CGCG 1 cut(s) 1535
NciI CCSGG 1 cut(s) 1001
NcoI CCATGG 3 cut(s) 32, 432, 993
NdeII GATC 6 cut(s) 184, 542, 925, 1051, 1218, 1352
NlaIII CATG 9 cut(s) 36, 370, 436, 597, 709, 784, 997, 1072, 1139
NlaIV GGNNCC 3 cut(s) 558, 999, 1015
NmuCI GTSAC 3 cut(s) 119, 196, 1451
NsiI ATGCAT 1 cut(s) 703
NspI RCATGY 3 cut(s) 597, 1072, 1139
PaeR7I CTCGAG 2 cut(s) 1074, 1338
PceI AGGCCT 2 cut(s) 267, 687
PciI ACATGT 1 cut(s) 1135
PctI GAATGC 1 cut(s) 701
PfeI GAWTC 8 cut(s) 28, 726, 845, 1237, 1477, 1519, 1622, 1652
PkrI GCNGC 5 cut(s) 40, 43, 568, 718, 1498
PleI GAGTC 4 cut(s) 205, 450, 885, 1593
PpsI GAGTC 4 cut(s) 205, 450, 885, 1593
PpuMI RGGWCCY 1 cut(s) 529
PscI ACATGT 1 cut(s) 1135
PshAI GACNNNNGTC 1 cut(s) 876
Psp5II RGGWCCY 1 cut(s) 529
PspEI GGTNACC 1 cut(s) 196
PspN4I GGNNCC 3 cut(s) 558, 999, 1015
PspPI GGNCC 4 cut(s) 246, 529, 574, 997
PspPPI RGGWCCY 1 cut(s) 529
PspXI VCTCGAGB 1 cut(s) 1338
PstNI CAGNNNCTG 1 cut(s) 532
PsuI RGATCY 3 cut(s) 184, 925, 1352
PvuII CAGCTG 1 cut(s) 1448
RsaI GTAC 3 cut(s) 411, 1113, 1485
RsaNI GTAC 3 cut(s) 410, 1112, 1484
RseI CAYNNNNRTG 1 cut(s) 1067
SaqAI TTAA 4 cut(s) 101, 381, 758, 1574
SatI GCNGC 5 cut(s) 39, 42, 567, 717, 1497
Sau3AI GATC 6 cut(s) 184, 542, 925, 1051, 1218, 1352
Sau96I GGNCC 4 cut(s) 246, 529, 574, 997
SchI GAGTC 4 cut(s) 205, 450, 886, 1594
ScrFI CCNGG 1 cut(s) 1001
SduI GDGCHC 1 cut(s) 490
SfaNI GCATC 4 cut(s) 457, 629, 634, 1083
SfcI CTRYAG 2 cut(s) 524, 1636
Sfr274I CTCGAG 2 cut(s) 1074, 1338
SinI GGWCC 2 cut(s) 529, 997
SlaI CTCGAG 2 cut(s) 1074, 1338
SmiMI CAYNNNNRTG 1 cut(s) 1067
SmlI CTYRAG 4 cut(s) 213, 1074, 1338, 1459
SmoI CTYRAG 4 cut(s) 213, 1074, 1338, 1459
Sse9I AATT 9 cut(s) 15, 275, 495, 624, 822, 863, 917, 939, 1284
SseBI AGGCCT 2 cut(s) 267, 687
SsiI CCGC 5 cut(s) 124, 810, 1404, 1496, 1533
SspI AATATT 1 cut(s) 399
StuI AGGCCT 2 cut(s) 267, 687
StyD4I CCNGG 1 cut(s) 999
StyI CCWWGG 5 cut(s) 32, 432, 730, 993, 1509
TaaI ACNGT 4 cut(s) 1111, 1124, 1293, 1488
TaqI TCGA 4 cut(s) 830, 1075, 1197, 1339
TaqII GACCGA 1 cut(s) 1048
TasI AATT 9 cut(s) 15, 275, 495, 624, 822, 863, 917, 939, 1284
TatI WGTACW 1 cut(s) 409
TauI GCSGC 1 cut(s) 1499
TfiI GAWTC 8 cut(s) 28, 726, 845, 1237, 1477, 1519, 1622, 1652
Tru1I TTAA 4 cut(s) 101, 381, 758, 1574
Tru9I TTAA 4 cut(s) 101, 381, 758, 1574
TscAI CASTG 2 cut(s) 552, 1366
TseFI GTSAC 3 cut(s) 119, 196, 1451
TseI GCWGC 4 cut(s) 38, 41, 566, 716
Tsp45I GTSAC 3 cut(s) 119, 196, 1451
TspDTI ATGAA 8 cut(s) 77, 694, 695, 776, 816, 950, 1380, 1511
TspGWI ACGGA 1 cut(s) 333
TspRI CASTG 2 cut(s) 552, 1366
VpaK11BI GGWCC 2 cut(s) 529, 997
XapI RAATTY 2 cut(s) 495, 939
XceI RCATGY 3 cut(s) 597, 1072, 1139
XhoI CTCGAG 2 cut(s) 1074, 1338
Zsp2I ATGCAT 1 cut(s) 703
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.