FvH4_6g33651

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000160
Physical Location & Seq
Forward (+)
26671541 .. 26672797
1257 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g33651.t1

Sequence Viewer

Length: 1257 bp
ATGGAGAAGTTGTGTCTTGCTTTATATTTTACAGGATGCAAGCTGCGCCACTACATGCTTGCCTTTACCACGGTTGTGATCGCTCAATCTGACCTGGTCAAATACATGCTCTCTCGACCTATCTTACGGGGATGCATAGGCAAGTGGATATTAGCCATGTTTGAATTCTCGTTGCAATATGTTCTGCAAAAGGCAGTAAAAGGACAGGCAATAGCAGACTTTCTCACTCATCACCCACCTTCAGAGCTCACGGCGTTTCGCGAGTTGGAATTCGCTGCTGTAGCGCTCGCTCCGTGGACCCTTTACTTTGATGGATCACGGACTGATACCGCAGCTGGAGCCGGGATAGCCATAGAAAATCCCGCCGGGGATCGCTTCTCCTACTCGTTCCAGCTCGATTTCAAATGCACCAATAACCAGGCCGAATACGAGGCTCTCATCATCGAGCTGGAAATTTTGTTGGACTTAGGAGTCCGCGAAGTTCAGGTCTTTGGCGATTCTCTGTTGGTCGTCAACCAGCTAGTGAAGAAGTTCAAGTGCTTAAGCTCGTCCATCGAACTATACCTGCGCAAGGCATTTGTAGTATTGGATCAATTCGACTACGTCTACATCGAGCACATTCCACGCGAGTTCAACTTCGCCGCCAACGAGCTCGCCCAAGTAGCGTCCGGCCTCAACCTGCGCGAACGGTTGCTCAAAGTCGAGCGCCGTACCCTTCCCTCTTTCATCGCTGGGGGGCAATTTCAGGCCGCCCCCCCCCCCCCCCCGACCGAGGTCGCGGCCTTAGACCCTATCGATGAGGATTGGCGGCTACCATTTATCGCCTACCTCCATAATCCCAATGACGCCGCGTTCAAGAACACCATCAACTACTTGGCGAAGATTACGTCCAAGCTATGTGGCAGGAGCTTGAAGATCTCGACGAACACCGCGTCACCGCTTTCAACAATCTCATCCTCGAGAAACAACGCATCGCGCGGTCGTACGATAAAGTCACGCGAGGATGGAGCTATGCTGAGGGCCAGAAAGTGTGGCGCGCGGTACTCCCACTTGGGGACAAAACCGAAGGTCGGGGCAAGTGGTCCGCTCGATGAGAAGACCCCTTTATTATTCATCGTATACTCCCCAAGGGGGCATACCACCTGCGCGACTTGGACGGTACTATTCATCGCAATCCTATTAATGGCCGCTTCCTCAAGCGTCACATTGCTGGAGTTTGGGAACGCAAGGATCCTCCACATCCCCCAAAACCCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

419

Amino Acids

46.49

Weight (kDa)

8.89

Isoelectric Point (pI)

36.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_3 PF13456 103 - 221 2.2e-20 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000160)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g11612 FvH4_2g25851 FvH4_3g22802 FvH4_3g22805 FvH4_3g31361 FvH4_3g31382 FvH4_4g05272 FvH4_4g05273 FvH4_4g14567 FvH4_4g15161 FvH4_5g22540 FvH4_6g13113 FvH4_6g31923 FvH4_6g31924 FvH4_6g33651 FvH4_6g45122 FvH4_7g03662
pyrus_communis pycom01g04240 pycom01g24010 pycom02g18210 pycom02g19420 pycom05g06510 pycom09g15750 pycom09g18940 pycom12g02580 pycom12g03100 pycom12g08310 pycom13g22710 pycom13g28060 pycom16g18340 pycom16g18350 pycom16g24880 pycom16g26240 pycom461g00260 pycom520g00980 pycom520g01320
rosa_chinensis RchiOBHm_Chr1g0320731 RchiOBHm_Chr2g0102771 RchiOBHm_Chr3g0462151 RchiOBHm_Chr5g0038141 RchiOBHm_Chr5g0069371 RchiOBHm_Chr7g0239101
rosa_multiflora Rmu_co8038252.1_g000001 Rmu_co8138412.1_g000001 Rmu_co8331087.1_g000001 Rmu_co8479311.1_g000001 Rmu_sc0000112.1_g000018 Rmu_sc0000346.1_g000012 Rmu_sc0002102.1_g000002 Rmu_sc0003505.1_g000013 Rmu_sc0004249.1_g000007 Rmu_sc0004448.1_g000010 Rmu_sc0004594.1_g000011 Rmu_sc0004915.1_g000010 Rmu_sc0008019.1_g000019 Rmu_sc0008303.1_g000001 Rmu_sc0008355.1_g000005 Rmu_sc0009253.1_g000018 Rmu_sc0010211.1_g000002 Rmu_sc0010252.1_g000009 Rmu_sc0011534.1_g000008 Rmu_sc0014811.1_g000009 Rmu_sc0019475.1_g000001 Rmu_sc0024897.1_g000001 Rmu_sc0024898.1_g000001 Rmu_sc0031791.1_g000001 Rmu_sc0038715.1_g000001
rosa_roxburghii Rroxscaffold_165G00436940 Rroxscaffold_174G00435270 Rroxscaffold_177G00434330 Rroxscaffold_177G00434340 Rroxscaffold_177G00434350 Rroxscaffold_1G00002160 Rroxscaffold_1G00025260 Rroxscaffold_1G00042950 Rroxscaffold_1G00068010 Rroxscaffold_2G00107530 Rroxscaffold_3G00221190 Rroxscaffold_3G00221520 Rroxscaffold_3G00223200 Rroxscaffold_4G00322230 Rroxscaffold_4G00331810 Rroxscaffold_5G00385150 Rroxscaffold_5G00387510 Rroxscaffold_6G00410520 Rroxscaffold_6G00423360 Rroxscaffold_6G00423370 Rroxscaffold_6G00429210 Rroxscaffold_7G00158300 Rroxscaffold_7G00163480 Rroxscaffold_7G00171410 Rroxscaffold_7G00178940 Rroxscaffold_7G00199480 Rroxscaffold_7G00205630 Rroxscaffold_7G00207440
rosa_rugosa Rorug01G0056400 Rorug04G0063900 Rorug05G0251400 Rorug07G0221900
rosa_samantha Rh1DG169400 Rh2AG292900 Rh2DG519200 Rh4DG260600 Rh5AG042600 Rh6BG117500
rosa_wichuraiana Rw0G001900 Rw0G005150 Rw0G006380 Rw0G015140 Rw0G016320 Rw0G019440 Rw0G019840 Rw0G023740 Rw1G001590 Rw1G002180 Rw1G003560 Rw1G004280 Rw1G006110 Rw1G006680 Rw1G007920 Rw1G008480 Rw1G009120 Rw1G010310 Rw1G014900 Rw1G019650 Rw1G022070 Rw1G022170 Rw1G041570 Rw2G002740 Rw2G005760 Rw2G032370 Rw2G046770 Rw2G050600 Rw2G051420 Rw3G015930 Rw3G016280 Rw3G019580 Rw3G028420 Rw4G003430 Rw4G005350 Rw4G007530 Rw4G008150 Rw4G009580 Rw4G010250 Rw4G015800 Rw4G017000 Rw4G017910 Rw4G018510 Rw4G019700 Rw4G031010 Rw5G012650 Rw5G020140 Rw5G022060 Rw5G034420 Rw5G035560 Rw5G043010 Rw5G046750 Rw5G047340 Rw5G049500 Rw6G001390 Rw6G002210 Rw6G004530 Rw6G004770 Rw6G005100 Rw6G005890 Rw6G011860 Rw6G014680 Rw6G019480 Rw6G028970 Rw6G033800 Rw7G013050 Rw7G014800 Rw7G025760 Rw7G025850 Rw7G026730 Rw7G026870 Rw7G036330 Rw7G036430 Rw7G039320 Rw7G039510 Rw7G039560 Rw7G041370 Rw7G042050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1151
AasI GACNNNNNNGTC 1 cut(s) 470
Acc16I TGCGCA 1 cut(s) 569
Acc36I ACCTGC 3 cut(s) 573, 687, 1151
AccBSI CCGCTC 1 cut(s) 1087
AccI GTMKAC 2 cut(s) 606, 1119
AclWI GGATC 5 cut(s) 322, 378, 597, 1225, 1238
AcoI YGGCCR 1 cut(s) 1185
AcsI RAATTY 3 cut(s) 164, 269, 453
AcuI CTGAAG 1 cut(s) 225
AcyI GRCGYC 1 cut(s) 846
AfaI GTAC 4 cut(s) 712, 985, 1043, 1161
AfeI AGCGCT 1 cut(s) 285
AfiI CCNNNNNNNGG 6 cut(s) 571, 772, 1053, 1070, 1131, 1183
AflII CTTAAG 1 cut(s) 541
AgsI TTSAA 7 cut(s) 164, 403, 535, 634, 856, 913, 945
AjnI CCWGG 2 cut(s) 93, 417
AleI CACNNNNGTG 1 cut(s) 74
Alw21I GWGCWC 3 cut(s) 249, 618, 654
AlwI GGATC 5 cut(s) 322, 378, 597, 1225, 1238
Ama87I CYCGRG 1 cut(s) 958
Aor51HI AGCGCT 1 cut(s) 285
AoxI GGCC 6 cut(s) 420, 670, 747, 780, 1020, 1185
ApeKI GCWGC 3 cut(s) 43, 275, 332
ApoI RAATTY 3 cut(s) 164, 269, 453
ArsI GACNNNNNNTTYG 6 cut(s) 471, 503, 872, 904, 917, 949
AseI ATTAAT 1 cut(s) 1181
Asp700I GAANNNNTTC 1 cut(s) 530
AspLEI GCGC 9 cut(s) 48, 286, 570, 684, 708, 978, 1037, 1039, 1148
AspS9I GGNCC 3 cut(s) 297, 1020, 1082
AsuC2I CCSGG 2 cut(s) 343, 367
AsuHPI GGTGA 2 cut(s) 224, 927
AvaI CYCGRG 1 cut(s) 958
AvaII GGWCC 2 cut(s) 297, 1082
BamHI GGATCC 1 cut(s) 1230
BanII GRGCYC 2 cut(s) 249, 654
BbsI GAAGAC 1 cut(s) 1103
Bbv12I GWGCWC 3 cut(s) 249, 618, 654
BbvCI CCTCAGC 1 cut(s) 1016
BbvI GCAGC 3 cut(s) 30, 262, 344
BccI CCATC 4 cut(s) 305, 560, 872, 998
BceAI ACGGC 2 cut(s) 267, 693
BciT130I CCWGG 2 cut(s) 95, 419
BcnI CCSGG 2 cut(s) 343, 367
BfaI CTAG 1 cut(s) 521
BfmI CTRYAG 1 cut(s) 279
BfoI RGCGCY 2 cut(s) 287, 709
BfrI CTTAAG 1 cut(s) 541
BfuAI ACCTGC 3 cut(s) 573, 687, 1151
BglII AGATCT 1 cut(s) 915
BisI GCNGC 9 cut(s) 44, 276, 333, 642, 750, 780, 809, 849, 1188
BlsI GCNGC 9 cut(s) 45, 277, 334, 643, 751, 781, 810, 850, 1189
Bme1390I CCNGG 4 cut(s) 95, 343, 367, 419
Bme18I GGWCC 2 cut(s) 297, 1082
BmeT110I CYCGRG 1 cut(s) 958
BmgT120I GGNCC 3 cut(s) 297, 1020, 1082
BmiI GGNNCC 3 cut(s) 299, 340, 1232
BmrFI CCNGG 4 cut(s) 95, 343, 367, 419
BmsI GCATC 3 cut(s) 26, 122, 980
BoxI GACNNNNGTC 1 cut(s) 773
BpiI GAAGAC 1 cut(s) 1103
BpmI CTGGAG 2 cut(s) 357, 1232
Bpu10I CCTNAGC 1 cut(s) 1016
BpuEI CTTGAG 1 cut(s) 1180
BpuMI CCSGG 2 cut(s) 343, 367
Bsa29I ATCGAT 1 cut(s) 795
BsaHI GRCGYC 1 cut(s) 846
BsaJI CCNNGG 5 cut(s) 69, 293, 366, 771, 1127
BsaXI ACNNNNNCTCC 1 cut(s) 26
Bsc4I CCNNNNNNNGG 6 cut(s) 571, 772, 1053, 1070, 1131, 1183
Bse3DI GCAATG 1 cut(s) 1205
BseBI CCWGG 2 cut(s) 95, 419
BseCI ATCGAT 1 cut(s) 795
BseDI CCNNGG 5 cut(s) 69, 293, 366, 771, 1127
BseGI GGATG 5 cut(s) 41, 137, 953, 1009, 1239
BseLI CCNNNNNNNGG 6 cut(s) 571, 772, 1053, 1070, 1131, 1183
BseMI GCAATG 1 cut(s) 1205
BseMII CTCAG 1 cut(s) 1007
BsePI GCGCGC 1 cut(s) 1035
BseXI GCAGC 3 cut(s) 30, 262, 344
BseYI CCCAGC 1 cut(s) 731
Bsh1285I CGRYCG 2 cut(s) 771, 982
BshFI GGCC 6 cut(s) 422, 672, 749, 782, 1022, 1187
BshVI ATCGAT 1 cut(s) 795
BsiEI CGRYCG 2 cut(s) 771, 982
BsiHKAI GWGCWC 3 cut(s) 249, 618, 654
BsiHKCI CYCGRG 1 cut(s) 958
BsiSI CCGG 3 cut(s) 342, 366, 669
BsiWI CGTACG 1 cut(s) 983
BslFI GGGAC 1 cut(s) 1069
BslI CCNNNNNNNGG 6 cut(s) 571, 772, 1053, 1070, 1131, 1183
BsmFI GGGAC 1 cut(s) 1069
BsnI GGCC 6 cut(s) 422, 672, 749, 782, 1022, 1187
BsoBI CYCGRG 1 cut(s) 958
Bsp1286I GDGCHC 3 cut(s) 249, 618, 654
Bsp143I GATC 6 cut(s) 78, 314, 370, 589, 915, 1230
Bsp68I TCGCGA 1 cut(s) 261
BspANI GGCC 6 cut(s) 422, 672, 749, 782, 1022, 1187
BspCNI CTCAG 1 cut(s) 1008
BspDI ATCGAT 1 cut(s) 795
BspLI GGNNCC 3 cut(s) 299, 340, 1232
BspMI ACCTGC 3 cut(s) 573, 687, 1151
BspPI GGATC 5 cut(s) 322, 378, 597, 1225, 1238
BspTI CTTAAG 1 cut(s) 541
BsrBI CCGCTC 1 cut(s) 1087
BsrDI GCAATG 1 cut(s) 1205
BssECI CCNNGG 5 cut(s) 69, 293, 366, 771, 1127
BssHII GCGCGC 1 cut(s) 1035
BssMI GATC 6 cut(s) 78, 314, 370, 589, 915, 1230
BssNAI GTATAC 1 cut(s) 1120
BssNI GRCGYC 1 cut(s) 846
BssT1I CCWWGG 1 cut(s) 1127
Bst1107I GTATAC 1 cut(s) 1120
Bst2UI CCWGG 2 cut(s) 95, 419
Bst4CI ACNGT 3 cut(s) 73, 690, 1159
BstACI GRCGYC 1 cut(s) 846
BstAFI CTTAAG 1 cut(s) 541
BstC8I GCNNGC 5 cut(s) 41, 60, 288, 654, 1037
BstDEI CTNAG 3 cut(s) 466, 784, 1016
BstDSI CCRYGG 2 cut(s) 69, 293
BstENI CCTNNNNNAGG 1 cut(s) 569
BstF5I GGATG 5 cut(s) 41, 137, 953, 1009, 1239
BstH2I RGCGCY 2 cut(s) 287, 709
BstHHI GCGC 9 cut(s) 48, 286, 570, 684, 708, 978, 1037, 1039, 1148
BstKTI GATC 6 cut(s) 81, 317, 373, 592, 918, 1233
BstMBI GATC 6 cut(s) 78, 314, 370, 589, 915, 1230
BstMCI CGRYCG 2 cut(s) 771, 982
BstMWI GCNNNNNNNGC 5 cut(s) 45, 281, 338, 347, 662
BstNI CCWGG 2 cut(s) 95, 419
BstNSI RCATGY 2 cut(s) 58, 109
BstPAI GACNNNNGTC 1 cut(s) 773
BstSCI CCNGG 4 cut(s) 93, 341, 365, 417
BstSFI CTRYAG 1 cut(s) 279
BstV1I GCAGC 3 cut(s) 30, 262, 344
BstV2I GAAGAC 1 cut(s) 1103
BstX2I RGATCY 2 cut(s) 915, 1230
BstYI RGATCY 2 cut(s) 915, 1230
BstZ17I GTATAC 1 cut(s) 1120
Bsu15I ATCGAT 1 cut(s) 795
BsuRI GGCC 6 cut(s) 422, 672, 749, 782, 1022, 1187
BsuTUI ATCGAT 1 cut(s) 795
BtgI CCRYGG 2 cut(s) 69, 293
BtgZI GCGATG 3 cut(s) 712, 957, 1153
BtsCI GGATG 5 cut(s) 41, 137, 953, 1009, 1239
BtuMI TCGCGA 1 cut(s) 261
BveI ACCTGC 3 cut(s) 573, 687, 1151
Cac8I GCNNGC 5 cut(s) 41, 60, 288, 654, 1037
CfoI GCGC 9 cut(s) 48, 286, 570, 684, 708, 978, 1037, 1039, 1148
Cfr13I GGNCC 3 cut(s) 297, 1020, 1082
ClaI ATCGAT 1 cut(s) 795
CseI GACGC 4 cut(s) 654, 854, 921, 1189
CsiI ACCWGGT 1 cut(s) 93
Csp6I GTAC 4 cut(s) 711, 984, 1042, 1160
CspCI CAANNNNNGTGG 2 cut(s) 880, 915
CviAII CATG 3 cut(s) 55, 106, 157
CviQI GTAC 4 cut(s) 711, 984, 1042, 1160
DdeI CTNAG 3 cut(s) 466, 784, 1016
DpnI GATC 6 cut(s) 80, 316, 372, 591, 917, 1232
DpnII GATC 6 cut(s) 78, 314, 370, 589, 915, 1230
DrdI GACNNNNNNGTC 1 cut(s) 470
DseDI GACNNNNNNGTC 1 cut(s) 470
EaeI YGGCCR 1 cut(s) 1185
Ecl136II GAGCTC 2 cut(s) 247, 652
Eco130I CCWWGG 1 cut(s) 1127
Eco24I GRGCYC 2 cut(s) 249, 654
Eco47I GGWCC 2 cut(s) 297, 1082
Eco47III AGCGCT 1 cut(s) 285
Eco53kI GAGCTC 2 cut(s) 247, 652
Eco57I CTGAAG 1 cut(s) 225
Eco88I CYCGRG 1 cut(s) 958
EcoICRI GAGCTC 2 cut(s) 247, 652
EcoNI CCTNNNNNAGG 1 cut(s) 569
EcoRI GAATTC 2 cut(s) 164, 269
EcoRII CCWGG 2 cut(s) 93, 417
EcoT14I CCWWGG 1 cut(s) 1127
EcoT22I ATGCAT 1 cut(s) 137
EcoT38I GRGCYC 2 cut(s) 249, 654
ErhI CCWWGG 1 cut(s) 1127
FaeI CATG 3 cut(s) 58, 109, 160
FaqI GGGAC 1 cut(s) 1069
FatI CATG 3 cut(s) 54, 105, 156
FauI CCCGC 1 cut(s) 370
FblI GTMKAC 2 cut(s) 606, 1119
Fnu4HI GCNGC 9 cut(s) 44, 276, 333, 642, 750, 780, 809, 849, 1188
FokI GGATG 5 cut(s) 48, 144, 940, 1016, 1226
FriOI GRGCYC 2 cut(s) 249, 654
Fsp4HI GCNGC 9 cut(s) 44, 276, 333, 642, 750, 780, 809, 849, 1188
FspBI CTAG 1 cut(s) 521
FspI TGCGCA 1 cut(s) 569
GlaI GCGC 9 cut(s) 47, 285, 569, 683, 707, 977, 1036, 1038, 1147
GluI GCNGC 9 cut(s) 44, 276, 333, 642, 750, 780, 809, 849, 1188
GsaI CCCAGC 1 cut(s) 735
GsuI CTGGAG 2 cut(s) 357, 1232
HaeII RGCGCY 2 cut(s) 287, 709
HaeIII GGCC 6 cut(s) 422, 672, 749, 782, 1022, 1187
HapII CCGG 3 cut(s) 342, 366, 669
HgaI GACGC 4 cut(s) 654, 854, 921, 1189
HhaI GCGC 9 cut(s) 48, 286, 570, 684, 708, 978, 1037, 1039, 1148
Hin1I GRCGYC 1 cut(s) 846
Hin1II CATG 3 cut(s) 58, 109, 160
Hin6I GCGC 9 cut(s) 46, 284, 568, 682, 706, 976, 1035, 1037, 1146
HinP1I GCGC 9 cut(s) 46, 284, 568, 682, 706, 976, 1035, 1037, 1146
HincII GTYRAC 1 cut(s) 514
HindII GTYRAC 1 cut(s) 514
HinfI GANTC 2 cut(s) 471, 497
HpaII CCGG 3 cut(s) 342, 366, 669
HphI GGTGA 2 cut(s) 224, 927
Hpy166II GTNNAC 4 cut(s) 297, 514, 607, 1120
Hpy188I TCNGA 2 cut(s) 91, 244
Hpy188III TCNNGA 5 cut(s) 114, 260, 856, 919, 960
Hpy8I GTNNAC 4 cut(s) 297, 514, 607, 1120
Hpy99I CGWCG 1 cut(s) 925
HpyAV CCTTC 3 cut(s) 249, 725, 1060
HpyCH4III ACNGT 3 cut(s) 73, 690, 1159
HpyCH4IV ACGT 2 cut(s) 603, 887
HpyCH4V TGCA 5 cut(s) 39, 135, 175, 187, 408
HpyF10VI GCNNNNNNNGC 5 cut(s) 45, 281, 338, 347, 662
HpyF3I CTNAG 3 cut(s) 466, 784, 1016
HpySE526I ACGT 2 cut(s) 603, 887
Hsp92I GRCGYC 1 cut(s) 846
Hsp92II CATG 3 cut(s) 58, 109, 160
HspAI GCGC 9 cut(s) 46, 284, 568, 682, 706, 976, 1035, 1037, 1146
Kzo9I GATC 6 cut(s) 78, 314, 370, 589, 915, 1230
LmnI GCTCC 4 cut(s) 295, 338, 906, 1007
Lsp1109I GCAGC 3 cut(s) 30, 262, 344
LweI GCATC 3 cut(s) 26, 122, 980
MabI ACCWGGT 1 cut(s) 93
MaeI CTAG 1 cut(s) 521
MaeII ACGT 2 cut(s) 603, 887
MaeIII GTNAC 3 cut(s) 933, 993, 1201
MalI GATC 6 cut(s) 80, 316, 372, 591, 917, 1232
MbiI CCGCTC 1 cut(s) 1087
MboI GATC 6 cut(s) 78, 314, 370, 589, 915, 1230
MboII GAAGA 4 cut(s) 538, 892, 925, 1108
MflI RGATCY 2 cut(s) 915, 1230
MhlI GDGCHC 3 cut(s) 249, 618, 654
MluCI AATT 5 cut(s) 164, 269, 453, 593, 740
MlyI GAGTC 1 cut(s) 480
MmeI TCCRAC 2 cut(s) 246, 441
Mph1103I ATGCAT 1 cut(s) 137
MroXI GAANNNNTTC 1 cut(s) 530
MseI TTAA 2 cut(s) 542, 1181
MslI CAYNNNNRTG 1 cut(s) 74
MspA1I CMGCKG 1 cut(s) 335
MspCI CTTAAG 1 cut(s) 541
MspI CCGG 3 cut(s) 342, 366, 669
MspR9I CCNGG 4 cut(s) 95, 343, 367, 419
MvaI CCWGG 2 cut(s) 95, 419
MwoI GCNNNNNNNGC 5 cut(s) 45, 281, 338, 347, 662
NciI CCSGG 2 cut(s) 343, 367
NdeII GATC 6 cut(s) 78, 314, 370, 589, 915, 1230
NlaIII CATG 3 cut(s) 58, 109, 160
NlaIV GGNNCC 3 cut(s) 299, 340, 1232
NmuCI GTSAC 3 cut(s) 933, 993, 1201
NruI TCGCGA 1 cut(s) 261
NsbI TGCGCA 1 cut(s) 569
NsiI ATGCAT 1 cut(s) 137
NspI RCATGY 2 cut(s) 58, 109
OliI CACNNNNGTG 1 cut(s) 74
PaeR7I CTCGAG 1 cut(s) 958
PaqCI CACCTGC 1 cut(s) 1151
PauI GCGCGC 1 cut(s) 1035
PcsI WCGNNNNNNNCGW 3 cut(s) 609, 645, 929
PdmI GAANNNNTTC 1 cut(s) 530
PfeI GAWTC 1 cut(s) 497
Pfl23II CGTACG 1 cut(s) 983
PflFI GACNNNGTC 2 cut(s) 95, 602
PkrI GCNGC 9 cut(s) 45, 277, 334, 643, 751, 781, 810, 850, 1189
PleI GAGTC 1 cut(s) 479
PpsI GAGTC 1 cut(s) 479
PshAI GACNNNNGTC 1 cut(s) 773
PshBI ATTAAT 1 cut(s) 1181
Psp124BI GAGCTC 2 cut(s) 249, 654
Psp6I CCWGG 2 cut(s) 93, 417
PspFI CCCAGC 1 cut(s) 731
PspGI CCWGG 2 cut(s) 93, 417
PspLI CGTACG 1 cut(s) 983
PspN4I GGNNCC 3 cut(s) 299, 340, 1232
PspPI GGNCC 3 cut(s) 297, 1020, 1082
PsuI RGATCY 2 cut(s) 915, 1230
PsyI GACNNNGTC 2 cut(s) 95, 602
PteI GCGCGC 1 cut(s) 1035
PvuII CAGCTG 1 cut(s) 335
RruI TCGCGA 1 cut(s) 261
RsaI GTAC 4 cut(s) 712, 985, 1043, 1161
RsaNI GTAC 4 cut(s) 711, 984, 1042, 1160
RseI CAYNNNNRTG 1 cut(s) 74
SacI GAGCTC 2 cut(s) 249, 654
SaqAI TTAA 2 cut(s) 542, 1181
SatI GCNGC 9 cut(s) 44, 276, 333, 642, 750, 780, 809, 849, 1188
Sau3AI GATC 6 cut(s) 78, 314, 370, 589, 915, 1230
Sau96I GGNCC 3 cut(s) 297, 1020, 1082
SchI GAGTC 1 cut(s) 480
ScrFI CCNGG 4 cut(s) 95, 343, 367, 419
SduI GDGCHC 3 cut(s) 249, 618, 654
SexAI ACCWGGT 1 cut(s) 93
SfaNI GCATC 3 cut(s) 26, 122, 980
SfcI CTRYAG 1 cut(s) 279
Sfr274I CTCGAG 1 cut(s) 958
SinI GGWCC 2 cut(s) 297, 1082
SlaI CTCGAG 1 cut(s) 958
SmiMI CAYNNNNRTG 1 cut(s) 74
SmlI CTYRAG 3 cut(s) 541, 958, 1195
SmoI CTYRAG 3 cut(s) 541, 958, 1195
Sse9I AATT 5 cut(s) 164, 269, 453, 593, 740
SspMI CTAG 1 cut(s) 521
SstI GAGCTC 2 cut(s) 249, 654
StyD4I CCNGG 4 cut(s) 93, 341, 365, 417
StyI CCWWGG 1 cut(s) 1127
TaaI ACNGT 3 cut(s) 73, 690, 1159
TaiI ACGT 2 cut(s) 606, 890
TaqII GACCGA 1 cut(s) 785
TasI AATT 5 cut(s) 164, 269, 453, 593, 740
TauI GCSGC 6 cut(s) 644, 752, 782, 811, 851, 1190
TfiI GAWTC 1 cut(s) 497
Tru1I TTAA 2 cut(s) 542, 1181
Tru9I TTAA 2 cut(s) 542, 1181
TseFI GTSAC 3 cut(s) 933, 993, 1201
TseI GCWGC 3 cut(s) 43, 275, 332
Tsp45I GTSAC 3 cut(s) 933, 993, 1201
TspDTI ATGAA 3 cut(s) 715, 1102, 1156
TspGWI ACGGA 2 cut(s) 282, 334
Tth111I GACNNNGTC 2 cut(s) 95, 602
Vha464I CTTAAG 1 cut(s) 541
VpaK11BI GGWCC 2 cut(s) 297, 1082
VspI ATTAAT 1 cut(s) 1181
XagI CCTNNNNNAGG 1 cut(s) 569
XapI RAATTY 3 cut(s) 164, 269, 453
XceI RCATGY 2 cut(s) 58, 109
XcmI CCANNNNNNNNNTGG 1 cut(s) 871
XhoI CTCGAG 1 cut(s) 958
XmiI GTMKAC 2 cut(s) 606, 1119
XmnI GAANNNNTTC 1 cut(s) 530
XspI CTAG 1 cut(s) 521
Zsp2I ATGCAT 1 cut(s) 137
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.