Rw5G049500

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000160
Physical Location & Seq
Forward (+)
85896393 .. 85897877
1485 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G049500.1

Sequence Viewer

Length: 1173 bp
ATGCGACGACACAAGCTCAAGATGAATCCCGCTAAATGCCCTTTTGGGGTTCAAGCGGGAGATTTCCTGGGATTCATTGTCTATCAGCGAGGAATTGAGGTCCCTGAAGACAAGGCGAACACAGGACAGAATGAGTTTGTATGGGAGCCTAAACATCAAGAGGCTTTCGACAGAATTAAGAATTACCTAGCAAGCCCGCCAGTGCTAGTTCCGCCGAGGGCCGGATTTCCATTGAAGTTATATATATCAGCGGCCGAAGCTTCCATTGGCAGTTTACTCGCTCAGGATGATGAAGGGGGTATTGAGCACGCTATTTTCTACCTCAGCCGAACGTTGACAGATTGTGAGACAAGGTACACTCCTATGGAAAAGTTGTGTCTTACTTTGTACTTCTCGGGGTGCAAGCTGCGGCACTACATGTTATCCTTTACTACCTGTATTATTGCCCAAACCGATCTGGGACAAGCCATCGCGGACTTTCTTGCACATCATCCTACGTTGGATGTCCCTGGAATGAAGGAGTTAGAGATAGCGACCGCGACTACAACTCGACCAGATTTGGCGTGCATTCCGGAGTACGCAGTATGGTATCAAGCCACAGTCTCCTTACAACCCTGGGTATTATTTTTTGATGGCTCAAGAACGGAAACATTAGCAGGGGCAGGGATTGTTTTGGAAAATCCAGTTGGCGACCGCTTTTCTTATTCTTTCCAACTGGAGTTTAAATGCACGAACAACCAGGCAGAATATGAAGCCCTTATTATCGGGCTAGAAGTCTTACTGGAACTGGGCGTTAGGGATGTTCAGATCCGCGGTGACTCTCAGCTACTTCTGGATCAATTTAATGACGCCGATTTGGAATACATCACTCGCGAGAGCAATTTTGCAGCCAATGAGCTCGCTCAATTGGCCACAGGCATTACATTGAAGTATGGGGTTCGCGAGCGTATTCTGAAAGTCGAGCGTCACACACTACCTTCATGGCTCGCAAGACCTGATTCGCCTGACGATCCAGTTGTCGCGGTACTCGAACCTATTGATGTTGATTGGCGCATCTCGCTGATCGATTACCTCAAGCAACCAGGCCCCACAGCAGACAAGAAGATTCGCTTTCTCGCCTTAAATTACTTCCTCAGGGGTGATGACTGTGACGACGCGGGGAAGATGGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

390

Amino Acids

43.81

Weight (kDa)

4.94

Isoelectric Point (pI)

34.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RT_RNaseH_2 PF17919 48 - 142 1.6e-20 RNase H-like domain found in reverse transcriptase
RT_RNaseH PF17917 77 - 151 2e-11 RNase H-like domain found in reverse transcriptase
RVT_3 PF13456 210 - 283 9.2e-11 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000160)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g11612 FvH4_2g25851 FvH4_3g22802 FvH4_3g22805 FvH4_3g31361 FvH4_3g31382 FvH4_4g05272 FvH4_4g05273 FvH4_4g14567 FvH4_4g15161 FvH4_5g22540 FvH4_6g13113 FvH4_6g31923 FvH4_6g31924 FvH4_6g33651 FvH4_6g45122 FvH4_7g03662
pyrus_communis pycom01g04240 pycom01g24010 pycom02g18210 pycom02g19420 pycom05g06510 pycom09g15750 pycom09g18940 pycom12g02580 pycom12g03100 pycom12g08310 pycom13g22710 pycom13g28060 pycom16g18340 pycom16g18350 pycom16g24880 pycom16g26240 pycom461g00260 pycom520g00980 pycom520g01320
rosa_chinensis RchiOBHm_Chr1g0320731 RchiOBHm_Chr2g0102771 RchiOBHm_Chr3g0462151 RchiOBHm_Chr5g0038141 RchiOBHm_Chr5g0069371 RchiOBHm_Chr7g0239101
rosa_multiflora Rmu_co8038252.1_g000001 Rmu_co8138412.1_g000001 Rmu_co8331087.1_g000001 Rmu_co8479311.1_g000001 Rmu_sc0000112.1_g000018 Rmu_sc0000346.1_g000012 Rmu_sc0002102.1_g000002 Rmu_sc0003505.1_g000013 Rmu_sc0004249.1_g000007 Rmu_sc0004448.1_g000010 Rmu_sc0004594.1_g000011 Rmu_sc0004915.1_g000010 Rmu_sc0008019.1_g000019 Rmu_sc0008303.1_g000001 Rmu_sc0008355.1_g000005 Rmu_sc0009253.1_g000018 Rmu_sc0010211.1_g000002 Rmu_sc0010252.1_g000009 Rmu_sc0011534.1_g000008 Rmu_sc0014811.1_g000009 Rmu_sc0019475.1_g000001 Rmu_sc0024897.1_g000001 Rmu_sc0024898.1_g000001 Rmu_sc0031791.1_g000001 Rmu_sc0038715.1_g000001
rosa_roxburghii Rroxscaffold_165G00436940 Rroxscaffold_174G00435270 Rroxscaffold_177G00434330 Rroxscaffold_177G00434340 Rroxscaffold_177G00434350 Rroxscaffold_1G00002160 Rroxscaffold_1G00025260 Rroxscaffold_1G00042950 Rroxscaffold_1G00068010 Rroxscaffold_2G00107530 Rroxscaffold_3G00221190 Rroxscaffold_3G00221520 Rroxscaffold_3G00223200 Rroxscaffold_4G00322230 Rroxscaffold_4G00331810 Rroxscaffold_5G00385150 Rroxscaffold_5G00387510 Rroxscaffold_6G00410520 Rroxscaffold_6G00423360 Rroxscaffold_6G00423370 Rroxscaffold_6G00429210 Rroxscaffold_7G00158300 Rroxscaffold_7G00163480 Rroxscaffold_7G00171410 Rroxscaffold_7G00178940 Rroxscaffold_7G00199480 Rroxscaffold_7G00205630 Rroxscaffold_7G00207440
rosa_rugosa Rorug01G0056400 Rorug04G0063900 Rorug05G0251400 Rorug07G0221900
rosa_samantha Rh1DG169400 Rh2AG292900 Rh2DG519200 Rh4DG260600 Rh5AG042600 Rh6BG117500
rosa_wichuraiana Rw0G001900 Rw0G005150 Rw0G006380 Rw0G015140 Rw0G016320 Rw0G019440 Rw0G019840 Rw0G023740 Rw1G001590 Rw1G002180 Rw1G003560 Rw1G004280 Rw1G006110 Rw1G006680 Rw1G007920 Rw1G008480 Rw1G009120 Rw1G010310 Rw1G014900 Rw1G019650 Rw1G022070 Rw1G022170 Rw1G041570 Rw2G002740 Rw2G005760 Rw2G032370 Rw2G046770 Rw2G050600 Rw2G051420 Rw3G015930 Rw3G016280 Rw3G019580 Rw3G028420 Rw4G003430 Rw4G005350 Rw4G007530 Rw4G008150 Rw4G009580 Rw4G010250 Rw4G015800 Rw4G017000 Rw4G017910 Rw4G018510 Rw4G019700 Rw4G031010 Rw5G012650 Rw5G020140 Rw5G022060 Rw5G034420 Rw5G035560 Rw5G043010 Rw5G046750 Rw5G047340 Rw5G049500 Rw6G001390 Rw6G002210 Rw6G004530 Rw6G004770 Rw6G005100 Rw6G005890 Rw6G011860 Rw6G014680 Rw6G019480 Rw6G028970 Rw6G033800 Rw7G013050 Rw7G014800 Rw7G025760 Rw7G025850 Rw7G026730 Rw7G026870 Rw7G036330 Rw7G036430 Rw7G039320 Rw7G039510 Rw7G039560 Rw7G041370 Rw7G042050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 7 cut(s) 473, 539, 813, 873, 942, 1022, 1157
AccIII TCCGGA 1 cut(s) 571
AclI AACGTT 1 cut(s) 332
AclWI GGATC 3 cut(s) 802, 843, 1004
AcoI YGGCCR 2 cut(s) 252, 909
AcuI CTGAAG 1 cut(s) 126
AcyI GRCGYC 1 cut(s) 849
AfaI GTAC 4 cut(s) 356, 389, 578, 1026
AfiI CCNNNNNNNGG 2 cut(s) 46, 221
AflIII ACRYGT 1 cut(s) 417
AgsI TTSAA 3 cut(s) 53, 235, 928
AjnI CCWGG 5 cut(s) 66, 508, 614, 738, 1081
AjuI GAANNNNNNNTTGG 4 cut(s) 249, 281, 669, 701
AluBI AGCT 5 cut(s) 16, 260, 406, 826, 898
AluI AGCT 5 cut(s) 16, 260, 406, 826, 898
Alw21I GWGCWC 2 cut(s) 309, 900
Alw26I GTCTC 2 cut(s) 341, 607
AlwI GGATC 3 cut(s) 802, 843, 1004
Ama87I CYCGRG 1 cut(s) 394
Aor13HI TCCGGA 1 cut(s) 571
AoxI GGCC 4 cut(s) 219, 252, 909, 1084
ApeKI GCWGC 2 cut(s) 406, 887
AspLEI GCGC 1 cut(s) 1053
AspS9I GGNCC 3 cut(s) 100, 219, 1085
AsuHPI GGTGA 2 cut(s) 827, 1151
AvaI CYCGRG 1 cut(s) 394
AvaII GGWCC 1 cut(s) 100
AxyI CCTNAGG 1 cut(s) 1133
BalI TGGCCA 1 cut(s) 911
BanII GRGCYC 1 cut(s) 900
BbsI GAAGAC 1 cut(s) 114
Bbv12I GWGCWC 2 cut(s) 309, 900
BbvCI CCTCAGC 1 cut(s) 323
BbvI GCAGC 2 cut(s) 393, 899
BccI CCATC 3 cut(s) 476, 626, 1159
BcgI CGANNNNNNTGC 2 cut(s) 259, 293
BciT130I CCWGG 5 cut(s) 68, 510, 616, 740, 1083
BcoDI GTCTC 2 cut(s) 341, 607
BfaI CTAG 3 cut(s) 188, 206, 770
BisI GCNGC 4 cut(s) 252, 407, 410, 888
BlsI GCNGC 4 cut(s) 253, 408, 411, 889
Bme1390I CCNGG 5 cut(s) 68, 510, 616, 740, 1083
Bme18I GGWCC 1 cut(s) 100
BmeT110I CYCGRG 1 cut(s) 394
BmgT120I GGNCC 3 cut(s) 100, 219, 1085
BmiI GGNNCC 3 cut(s) 102, 147, 1087
BmrFI CCNGG 5 cut(s) 68, 510, 616, 740, 1083
BmrI ACTGGG 1 cut(s) 797
BmsI GCATC 1 cut(s) 1062
BmuI ACTGGG 1 cut(s) 797
BpiI GAAGAC 1 cut(s) 114
BpmI CTGGAG 1 cut(s) 737
Bpu10I CCTNAGC 2 cut(s) 282, 323
BpuEI CTTGAG 2 cut(s) 622, 1058
Bsa29I ATCGAT 1 cut(s) 1065
BsaHI GRCGYC 1 cut(s) 849
BsaJI CCNNGG 6 cut(s) 67, 215, 508, 614, 615, 811
BsaWI WCCGGW 1 cut(s) 571
Bsc4I CCNNNNNNNGG 2 cut(s) 46, 221
Bse1I ACTGG 6 cut(s) 200, 683, 720, 786, 792, 1013
Bse21I CCTNAGG 1 cut(s) 1133
BseAI TCCGGA 1 cut(s) 571
BseBI CCWGG 5 cut(s) 68, 510, 616, 740, 1083
BseCI ATCGAT 1 cut(s) 1065
BseDI CCNNGG 6 cut(s) 67, 215, 508, 614, 615, 811
BseGI GGATG 4 cut(s) 292, 490, 508, 805
BseLI CCNNNNNNNGG 2 cut(s) 46, 221
BseMII CTCAG 4 cut(s) 296, 337, 836, 1147
BseNI ACTGG 6 cut(s) 200, 683, 720, 786, 792, 1013
BseX3I CGGCCG 1 cut(s) 252
BseXI GCAGC 2 cut(s) 393, 899
Bsh1236I CGCG 7 cut(s) 473, 539, 813, 873, 942, 1022, 1157
Bsh1285I CGRYCG 3 cut(s) 255, 537, 694
BshFI GGCC 4 cut(s) 221, 254, 911, 1086
BshVI ATCGAT 1 cut(s) 1065
BsiEI CGRYCG 3 cut(s) 255, 537, 694
BsiHKAI GWGCWC 2 cut(s) 309, 900
BsiHKCI CYCGRG 1 cut(s) 394
BsiSI CCGG 2 cut(s) 222, 572
BslFI GGGAC 3 cut(s) 86, 474, 491
BslI CCNNNNNNNGG 2 cut(s) 46, 221
BsmAI GTCTC 2 cut(s) 341, 607
BsmFI GGGAC 3 cut(s) 86, 474, 491
BsmI GAATGC 1 cut(s) 567
BsnI GGCC 4 cut(s) 221, 254, 911, 1086
BsoBI CYCGRG 1 cut(s) 394
Bsp1286I GDGCHC 2 cut(s) 309, 900
Bsp13I TCCGGA 1 cut(s) 571
Bsp143I GATC 5 cut(s) 454, 807, 835, 1009, 1062
Bsp68I TCGCGA 2 cut(s) 873, 942
BspANI GGCC 4 cut(s) 221, 254, 911, 1086
BspCNI CTCAG 4 cut(s) 295, 336, 835, 1146
BspDI ATCGAT 1 cut(s) 1065
BspEI TCCGGA 1 cut(s) 571
BspFNI CGCG 7 cut(s) 473, 539, 813, 873, 942, 1022, 1157
BspLI GGNNCC 3 cut(s) 102, 147, 1087
BspPI GGATC 3 cut(s) 802, 843, 1004
BsrI ACTGG 6 cut(s) 200, 683, 720, 786, 792, 1013
BssECI CCNNGG 6 cut(s) 67, 215, 508, 614, 615, 811
BssMI GATC 5 cut(s) 454, 807, 835, 1009, 1062
BssNI GRCGYC 1 cut(s) 849
Bst2UI CCWGG 5 cut(s) 68, 510, 616, 740, 1083
Bst4CI ACNGT 2 cut(s) 601, 1148
BstACI GRCGYC 1 cut(s) 849
BstC8I GCNNGC 8 cut(s) 193, 197, 309, 404, 565, 900, 944, 987
BstDEI CTNAG 4 cut(s) 282, 323, 822, 1133
BstDSI CCRYGG 1 cut(s) 811
BstF5I GGATG 4 cut(s) 292, 490, 508, 805
BstFNI CGCG 7 cut(s) 473, 539, 813, 873, 942, 1022, 1157
BstHHI GCGC 1 cut(s) 1053
BstKTI GATC 5 cut(s) 457, 810, 838, 1012, 1065
BstMAI GTCTC 2 cut(s) 341, 607
BstMBI GATC 5 cut(s) 454, 807, 835, 1009, 1062
BstMCI CGRYCG 3 cut(s) 255, 537, 694
BstMWI GCNNNNNNNGC 4 cut(s) 211, 257, 908, 1057
BstNI CCWGG 5 cut(s) 68, 510, 616, 740, 1083
BstNSI RCATGY 1 cut(s) 421
BstSCI CCNGG 5 cut(s) 66, 508, 614, 738, 1081
BstUI CGCG 7 cut(s) 473, 539, 813, 873, 942, 1022, 1157
BstV1I GCAGC 2 cut(s) 393, 899
BstV2I GAAGAC 1 cut(s) 114
BstX2I RGATCY 1 cut(s) 807
BstYI RGATCY 1 cut(s) 807
BstZI CGGCCG 1 cut(s) 252
Bsu15I ATCGAT 1 cut(s) 1065
Bsu36I CCTNAGG 1 cut(s) 1133
BsuRI GGCC 4 cut(s) 221, 254, 911, 1086
BsuTUI ATCGAT 1 cut(s) 1065
BtgI CCRYGG 1 cut(s) 811
BtgZI GCGATG 1 cut(s) 454
BtsCI GGATG 4 cut(s) 292, 490, 508, 805
BtsIMutI CAGTG 1 cut(s) 207
BtuMI TCGCGA 2 cut(s) 873, 942
Cac8I GCNNGC 8 cut(s) 193, 197, 309, 404, 565, 900, 944, 987
CfoI GCGC 1 cut(s) 1053
Cfr13I GGNCC 3 cut(s) 100, 219, 1085
Cfr42I CCGCGG 1 cut(s) 814
ClaI ATCGAT 1 cut(s) 1065
CseI GACGC 3 cut(s) 857, 953, 1163
Csp6I GTAC 4 cut(s) 355, 388, 577, 1025
CviAII CATG 2 cut(s) 418, 981
CviQI GTAC 4 cut(s) 355, 388, 577, 1025
DdeI CTNAG 4 cut(s) 282, 323, 822, 1133
DpnI GATC 5 cut(s) 456, 809, 837, 1011, 1064
DpnII GATC 5 cut(s) 454, 807, 835, 1009, 1062
DraI TTTAAA 1 cut(s) 724
EaeI YGGCCR 2 cut(s) 252, 909
EagI CGGCCG 1 cut(s) 252
EciI GGCGGA 1 cut(s) 201
Ecl136II GAGCTC 1 cut(s) 898
EclXI CGGCCG 1 cut(s) 252
Eco24I GRGCYC 1 cut(s) 900
Eco47I GGWCC 1 cut(s) 100
Eco52I CGGCCG 1 cut(s) 252
Eco53kI GAGCTC 1 cut(s) 898
Eco57I CTGAAG 1 cut(s) 126
Eco81I CCTNAGG 1 cut(s) 1133
Eco88I CYCGRG 1 cut(s) 394
EcoICRI GAGCTC 1 cut(s) 898
EcoO109I RGGNCCY 2 cut(s) 100, 1085
EcoRII CCWGG 5 cut(s) 66, 508, 614, 738, 1081
EcoT38I GRGCYC 1 cut(s) 900
FaeI CATG 2 cut(s) 421, 984
FalI AAGNNNNNCTT 2 cut(s) 1094, 1126
FaqI GGGAC 3 cut(s) 86, 474, 491
FatI CATG 2 cut(s) 417, 980
FauI CCCGC 4 cut(s) 37, 49, 204, 1150
Fnu4HI GCNGC 4 cut(s) 252, 407, 410, 888
FokI GGATG 4 cut(s) 299, 477, 515, 812
FriOI GRGCYC 1 cut(s) 900
Fsp4HI GCNGC 4 cut(s) 252, 407, 410, 888
FspBI CTAG 3 cut(s) 188, 206, 770
GlaI GCGC 1 cut(s) 1052
GluI GCNGC 4 cut(s) 252, 407, 410, 888
GsuI CTGGAG 1 cut(s) 737
HaeIII GGCC 4 cut(s) 221, 254, 911, 1086
HapII CCGG 2 cut(s) 222, 572
HgaI GACGC 3 cut(s) 857, 953, 1163
HhaI GCGC 1 cut(s) 1053
Hin1I GRCGYC 1 cut(s) 849
Hin1II CATG 2 cut(s) 421, 984
Hin6I GCGC 1 cut(s) 1051
HinP1I GCGC 1 cut(s) 1051
HincII GTYRAC 1 cut(s) 336
HindII GTYRAC 1 cut(s) 336
HindIII AAGCTT 1 cut(s) 258
HinfI GANTC 5 cut(s) 25, 72, 818, 998, 1105
HpaII CCGG 2 cut(s) 222, 572
HphI GGTGA 2 cut(s) 827, 1151
Hpy166II GTNNAC 3 cut(s) 275, 336, 357
Hpy188I TCNGA 2 cut(s) 807, 954
Hpy188III TCNNGA 8 cut(s) 19, 158, 284, 572, 639, 833, 872, 941
Hpy8I GTNNAC 3 cut(s) 275, 336, 357
Hpy99I CGWCG 2 cut(s) 9, 1157
HpyAV CCTTC 3 cut(s) 287, 511, 987
HpyCH4III ACNGT 2 cut(s) 601, 1148
HpyCH4IV ACGT 2 cut(s) 332, 497
HpyCH4V TGCA 5 cut(s) 402, 485, 567, 729, 887
HpyF10VI GCNNNNNNNGC 4 cut(s) 211, 257, 908, 1057
HpyF3I CTNAG 4 cut(s) 282, 323, 822, 1133
HpySE526I ACGT 2 cut(s) 332, 497
Hsp92I GRCGYC 1 cut(s) 849
Hsp92II CATG 2 cut(s) 421, 984
HspAI GCGC 1 cut(s) 1051
Kpn2I TCCGGA 1 cut(s) 571
KspI CCGCGG 1 cut(s) 814
Kzo9I GATC 5 cut(s) 454, 807, 835, 1009, 1062
LmnI GCTCC 1 cut(s) 145
Lsp1109I GCAGC 2 cut(s) 393, 899
LweI GCATC 1 cut(s) 1062
MaeI CTAG 3 cut(s) 188, 206, 770
MaeII ACGT 2 cut(s) 332, 497
MaeIII GTNAC 3 cut(s) 815, 965, 1148
MalI GATC 5 cut(s) 456, 809, 837, 1011, 1064
MboI GATC 5 cut(s) 454, 807, 835, 1009, 1062
MboII GAAGA 2 cut(s) 119, 1114
MfeI CAATTG 1 cut(s) 905
MflI RGATCY 1 cut(s) 807
MhlI GDGCHC 2 cut(s) 309, 900
MlsI TGGCCA 1 cut(s) 911
MluCI AATT 7 cut(s) 93, 174, 181, 839, 880, 905, 1123
MluNI TGGCCA 1 cut(s) 911
MlyI GAGTC 1 cut(s) 812
MmeI TCCRAC 2 cut(s) 480, 736
MnlI CCTC 7 cut(s) 83, 91, 154, 210, 332, 1082, 1142
Mox20I TGGCCA 1 cut(s) 911
MroI TCCGGA 1 cut(s) 571
MscI TGGCCA 1 cut(s) 911
MseI TTAA 4 cut(s) 177, 723, 843, 1121
MslI CAYNNNNRTG 1 cut(s) 362
Msp20I TGGCCA 1 cut(s) 911
MspA1I CMGCKG 2 cut(s) 251, 813
MspI CCGG 2 cut(s) 222, 572
MspR9I CCNGG 5 cut(s) 68, 510, 616, 740, 1083
MunI CAATTG 1 cut(s) 905
Mva1269I GAATGC 1 cut(s) 567
MvaI CCWGG 5 cut(s) 68, 510, 616, 740, 1083
MvnI CGCG 7 cut(s) 473, 539, 813, 873, 942, 1022, 1157
MwoI GCNNNNNNNGC 4 cut(s) 211, 257, 908, 1057
NdeII GATC 5 cut(s) 454, 807, 835, 1009, 1062
NlaIII CATG 2 cut(s) 421, 984
NlaIV GGNNCC 3 cut(s) 102, 147, 1087
NmeAIII GCCGAG 1 cut(s) 240
NmuCI GTSAC 3 cut(s) 815, 965, 1148
NruI TCGCGA 2 cut(s) 873, 942
NspI RCATGY 1 cut(s) 421
PasI CCCWGGG 1 cut(s) 615
PciI ACATGT 1 cut(s) 417
PcsI WCGNNNNNNNCGW 1 cut(s) 1026
PctI GAATGC 1 cut(s) 567
PfeI GAWTC 4 cut(s) 25, 72, 998, 1105
PkrI GCNGC 4 cut(s) 253, 408, 411, 889
PleI GAGTC 1 cut(s) 812
PpsI GAGTC 1 cut(s) 812
PpuMI RGGWCCY 1 cut(s) 100
PscI ACATGT 1 cut(s) 417
Psp124BI GAGCTC 1 cut(s) 900
Psp1406I AACGTT 1 cut(s) 332
Psp5II RGGWCCY 1 cut(s) 100
Psp6I CCWGG 5 cut(s) 66, 508, 614, 738, 1081
PspGI CCWGG 5 cut(s) 66, 508, 614, 738, 1081
PspN4I GGNNCC 3 cut(s) 102, 147, 1087
PspPI GGNCC 3 cut(s) 100, 219, 1085
PspPPI RGGWCCY 1 cut(s) 100
PsuI RGATCY 1 cut(s) 807
RruI TCGCGA 2 cut(s) 873, 942
RsaI GTAC 4 cut(s) 356, 389, 578, 1026
RsaNI GTAC 4 cut(s) 355, 388, 577, 1025
RseI CAYNNNNRTG 1 cut(s) 362
SacI GAGCTC 1 cut(s) 900
SacII CCGCGG 1 cut(s) 814
SaqAI TTAA 4 cut(s) 177, 723, 843, 1121
SatI GCNGC 4 cut(s) 252, 407, 410, 888
Sau3AI GATC 5 cut(s) 454, 807, 835, 1009, 1062
Sau96I GGNCC 3 cut(s) 100, 219, 1085
SchI GAGTC 1 cut(s) 812
ScrFI CCNGG 5 cut(s) 68, 510, 616, 740, 1083
SduI GDGCHC 2 cut(s) 309, 900
SfaNI GCATC 1 cut(s) 1062
Sfr303I CCGCGG 1 cut(s) 814
SgrBI CCGCGG 1 cut(s) 814
SinI GGWCC 1 cut(s) 100
SmiMI CAYNNNNRTG 1 cut(s) 362
SmlI CTYRAG 3 cut(s) 17, 637, 1073
SmoI CTYRAG 3 cut(s) 17, 637, 1073
Sse9I AATT 7 cut(s) 93, 174, 181, 839, 880, 905, 1123
SspMI CTAG 3 cut(s) 188, 206, 770
SstI GAGCTC 1 cut(s) 900
StyD4I CCNGG 5 cut(s) 66, 508, 614, 738, 1081
TaaI ACNGT 2 cut(s) 601, 1148
TaiI ACGT 2 cut(s) 335, 500
TaqI TCGA 5 cut(s) 168, 550, 960, 1029, 1065
TasI AATT 7 cut(s) 93, 174, 181, 839, 880, 905, 1123
TatI WGTACW 1 cut(s) 387
TauI GCSGC 2 cut(s) 254, 412
TfiI GAWTC 4 cut(s) 25, 72, 998, 1105
Tru1I TTAA 4 cut(s) 177, 723, 843, 1121
Tru9I TTAA 4 cut(s) 177, 723, 843, 1121
TscAI CASTG 1 cut(s) 207
TseFI GTSAC 3 cut(s) 815, 965, 1148
TseI GCWGC 2 cut(s) 406, 887
Tsp45I GTSAC 3 cut(s) 815, 965, 1148
TspDTI ATGAA 6 cut(s) 38, 64, 306, 530, 765, 969
TspGWI ACGGA 1 cut(s) 659
TspRI CASTG 1 cut(s) 207
VpaK11BI GGWCC 1 cut(s) 100
XceI RCATGY 1 cut(s) 421
XspI CTAG 3 cut(s) 188, 206, 770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.