Rw1G001590

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000160
Physical Location & Seq
Reverse (-)
2850887 .. 2853374
2488 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G001590.1

Sequence Viewer

Length: 1674 bp
ATGGAATATATTGCAGAACAACAGGAAGAAGAACTGCAGTTGGAAGATATCGGCCCAGCCCCTGCCAAATTAGAAGATACTGAAGCCGAAACTCAAGATCCTGTAGACCAAATCAACTTGGGAGATGAAGATAACCCTCGGCTAATCTCTATCAACTTAGTAGAACATGTATTACCTCTTAGAGTTGATTGTAAACCTTACAAACAAGCTCCTCGGCGATGTTCCGCCGAGGTACAAATTGAAATGAAAGAGGAAATTGAACGATTACTACATGCTAAATTTATTAGACCTGCTAGATATGTGGAATGGCGGCCAAACATGAAATATTATCTTTCATGGATGGTCATGCCGGCTATAATCAAATTTGTAGCCGAAGAGGATGTCCATAAAACCGCCTTCAGGTGCCCAGGATTTGTTGGAACCTTTGAATGGGTAGTGATGCCTTTCGGCTTAAAGAATGCCGGAGCGACTTACCAGAGGGCCATGAATGCCATTTTTCACGATTTAATTGGCAAAAATGTAGAGGTGTACATAGATGATGTGGTTGTTAAATCAAAAACCCGATCAGGACATCTAGCCGATCTTGAGCAAACATTCAAACATGAATACAAGTGGGAGCCAGAGCACCAACAAGCTTTTGACGAACTCAAGAAGTATTTAACACAACCCCCAGTGTTAGTACCTCCACAGAAAGGAAAGCCGTTGAAGCTCTACATAGCGGCCACAGCTGAATCGATTGGGAGCATGTTGGCTCAAGACAATGATCAAGGAAAAGAGCAAGTCGTCCATTATTTGAGCAGAATCCTCACACCATCAGTCAAAGGCCAGGCATTGGCTCAATTTCTTGCTGACCACCCTTCTATTGAAATTGAAGATATGGAGAACGTTGAAATAGATACTGCACAAGTCGGCCAGATGTATCACGAGCCTTGGCTACTATATTTTGATGGCTCAAGCACCACTGACTCTGCAGGGGTAGGAATAGTGATTGAATCTCCAACCGGCCAAAAGCATCAATATGCCTTCAAACTGGACTTTAACTGCACAAACAATCAGGCCGAATATGAAGCCTTAATAATTGGCCTGGAAGTATTGGAAGAACTTGGAGTAACAAGAGTTAAGGTGTTTGGGGACTCACTATTAGTCATCAATCAAATGCTCCAAGTTTTTAGATCCAATGAAATGGCTCAAATTGCTTCCGGCGTCAGCATTCCAGCGGGCCAAACTAACAAAATCATCACAATTGAGAGAAAATCATTGCCGTCTTTGGCCGAGAGAGGTATGCCGGCCGATGTATTTGAGTTAGACGTGCCACTTGGTGATTGGAGATTTTACATAATCCAACATCTTTTAATGAAAACTGATGGCGGTGGGAGCCGAAAAATTAGAATGTTGTCTAGCAAGTTCACAATTAAAAATGGTGAACTGCTAAGGAAAAGTCCTGATGATGACCTTCTTCTTCGTTGCCTCGGCTCCGAAGATGCCCAGCTAGTAATGGCTGAAGTTCATGAGGGTATTTGCGGAGCACACCAGGCTGGGATAAAAATGAGATGGCTAATTAGGAGACATGGTTACTACTGGCCAACTGTTCTTAAAGACTGTATTGAGTATGCCCGAGGTTGGCTCCATGCCAACTTCACGGGTCCATTCAGAGAGTTCCTGCTTTCCCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

557

Amino Acids

63.31

Weight (kDa)

5.3

Isoelectric Point (pI)

46.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_1 PF00078 124 - 201 1.3e-12 Reverse transcriptase (RNA-dependent DNA polymerase)
RT_RNaseH_2 PF17919 205 - 273 7.3e-16 RNase H-like domain found in reverse transcriptase
RNase_H PF00075 312 - 394 5e-06 RNase H
RVT_3 PF13456 315 - 395 1.3e-09 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000160)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g11612 FvH4_2g25851 FvH4_3g22802 FvH4_3g22805 FvH4_3g31361 FvH4_3g31382 FvH4_4g05272 FvH4_4g05273 FvH4_4g14567 FvH4_4g15161 FvH4_5g22540 FvH4_6g13113 FvH4_6g31923 FvH4_6g31924 FvH4_6g33651 FvH4_6g45122 FvH4_7g03662
pyrus_communis pycom01g04240 pycom01g24010 pycom02g18210 pycom02g19420 pycom05g06510 pycom09g15750 pycom09g18940 pycom12g02580 pycom12g03100 pycom12g08310 pycom13g22710 pycom13g28060 pycom16g18340 pycom16g18350 pycom16g24880 pycom16g26240 pycom461g00260 pycom520g00980 pycom520g01320
rosa_chinensis RchiOBHm_Chr1g0320731 RchiOBHm_Chr2g0102771 RchiOBHm_Chr3g0462151 RchiOBHm_Chr5g0038141 RchiOBHm_Chr5g0069371 RchiOBHm_Chr7g0239101
rosa_multiflora Rmu_co8038252.1_g000001 Rmu_co8138412.1_g000001 Rmu_co8331087.1_g000001 Rmu_co8479311.1_g000001 Rmu_sc0000112.1_g000018 Rmu_sc0000346.1_g000012 Rmu_sc0002102.1_g000002 Rmu_sc0003505.1_g000013 Rmu_sc0004249.1_g000007 Rmu_sc0004448.1_g000010 Rmu_sc0004594.1_g000011 Rmu_sc0004915.1_g000010 Rmu_sc0008019.1_g000019 Rmu_sc0008303.1_g000001 Rmu_sc0008355.1_g000005 Rmu_sc0009253.1_g000018 Rmu_sc0010211.1_g000002 Rmu_sc0010252.1_g000009 Rmu_sc0011534.1_g000008 Rmu_sc0014811.1_g000009 Rmu_sc0019475.1_g000001 Rmu_sc0024897.1_g000001 Rmu_sc0024898.1_g000001 Rmu_sc0031791.1_g000001 Rmu_sc0038715.1_g000001
rosa_roxburghii Rroxscaffold_165G00436940 Rroxscaffold_174G00435270 Rroxscaffold_177G00434330 Rroxscaffold_177G00434340 Rroxscaffold_177G00434350 Rroxscaffold_1G00002160 Rroxscaffold_1G00025260 Rroxscaffold_1G00042950 Rroxscaffold_1G00068010 Rroxscaffold_2G00107530 Rroxscaffold_3G00221190 Rroxscaffold_3G00221520 Rroxscaffold_3G00223200 Rroxscaffold_4G00322230 Rroxscaffold_4G00331810 Rroxscaffold_5G00385150 Rroxscaffold_5G00387510 Rroxscaffold_6G00410520 Rroxscaffold_6G00423360 Rroxscaffold_6G00423370 Rroxscaffold_6G00429210 Rroxscaffold_7G00158300 Rroxscaffold_7G00163480 Rroxscaffold_7G00171410 Rroxscaffold_7G00178940 Rroxscaffold_7G00199480 Rroxscaffold_7G00205630 Rroxscaffold_7G00207440
rosa_rugosa Rorug01G0056400 Rorug04G0063900 Rorug05G0251400 Rorug07G0221900
rosa_samantha Rh1DG169400 Rh2AG292900 Rh2DG519200 Rh4DG260600 Rh5AG042600 Rh6BG117500
rosa_wichuraiana Rw0G001900 Rw0G005150 Rw0G006380 Rw0G015140 Rw0G016320 Rw0G019440 Rw0G019840 Rw0G023740 Rw1G001590 Rw1G002180 Rw1G003560 Rw1G004280 Rw1G006110 Rw1G006680 Rw1G007920 Rw1G008480 Rw1G009120 Rw1G010310 Rw1G014900 Rw1G019650 Rw1G022070 Rw1G022170 Rw1G041570 Rw2G002740 Rw2G005760 Rw2G032370 Rw2G046770 Rw2G050600 Rw2G051420 Rw3G015930 Rw3G016280 Rw3G019580 Rw3G028420 Rw4G003430 Rw4G005350 Rw4G007530 Rw4G008150 Rw4G009580 Rw4G010250 Rw4G015800 Rw4G017000 Rw4G017910 Rw4G018510 Rw4G019700 Rw4G031010 Rw5G012650 Rw5G020140 Rw5G022060 Rw5G034420 Rw5G035560 Rw5G043010 Rw5G046750 Rw5G047340 Rw5G049500 Rw6G001390 Rw6G002210 Rw6G004530 Rw6G004770 Rw6G005100 Rw6G005890 Rw6G011860 Rw6G014680 Rw6G019480 Rw6G028970 Rw6G033800 Rw7G013050 Rw7G014800 Rw7G025760 Rw7G025850 Rw7G026730 Rw7G026870 Rw7G036330 Rw7G036430 Rw7G039320 Rw7G039510 Rw7G039560 Rw7G041370 Rw7G042050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 298
AccB1I GGYRCC 1 cut(s) 402
AccB7I CCANNNNNTGG 1 cut(s) 832
AccI GTMKAC 1 cut(s) 105
AciI CCGC 7 cut(s) 225, 310, 393, 719, 1217, 1368, 1521
AclI AACGTT 1 cut(s) 885
AclWI GGATC 2 cut(s) 92, 1167
AcoI YGGCCR 7 cut(s) 311, 720, 910, 1003, 1269, 1287, 1580
AcsI RAATTY 2 cut(s) 278, 362
AcuI CTGAAG 3 cut(s) 102, 382, 1521
AcyI GRCGYC 1 cut(s) 1203
AdeI CACNNNGTG 1 cut(s) 1319
AfaI GTAC 3 cut(s) 234, 530, 681
AfiI CCNNNNNNNGG 5 cut(s) 399, 429, 692, 832, 1620
AflIII ACRYGT 1 cut(s) 166
AjiI CACGTC 1 cut(s) 1309
AjnI CCWGG 4 cut(s) 406, 825, 1083, 1530
AluBI AGCT 5 cut(s) 209, 635, 709, 728, 1489
AluI AGCT 5 cut(s) 209, 635, 709, 728, 1489
Alw21I GWGCWC 2 cut(s) 627, 1528
Alw26I GTCTC 1 cut(s) 1558
AlwI GGATC 2 cut(s) 92, 1167
AlwNI CAGNNNCTG 1 cut(s) 62
Ama87I CYCGRG 1 cut(s) 1614
ApoI RAATTY 2 cut(s) 278, 362
ArsI GACNNNNNNTTYG 2 cut(s) 366, 398
AspS9I GGNCC 4 cut(s) 53, 480, 1219, 1643
AsuHPI GGTGA 2 cut(s) 1331, 1433
AvaI CYCGRG 1 cut(s) 1614
AvaII GGWCC 1 cut(s) 1643
BaeGI GKGCMC 1 cut(s) 407
BalI TGGCCA 1 cut(s) 1582
BanI GGYRCC 1 cut(s) 402
BauI CACGAG 1 cut(s) 923
Bbv12I GWGCWC 2 cut(s) 627, 1528
BccI CCATC 5 cut(s) 334, 820, 941, 1358, 1545
BceAI ACGGC 2 cut(s) 685, 1246
BciT130I CCWGG 4 cut(s) 408, 827, 1085, 1532
BclI TGATCA 1 cut(s) 763
BcoDI GTCTC 1 cut(s) 1558
BfaI CTAG 4 cut(s) 294, 575, 1398, 1490
BfmI CTRYAG 3 cut(s) 35, 102, 969
BfuAI ACCTGC 1 cut(s) 298
BisI GCNGC 2 cut(s) 311, 720
BlsI GCNGC 2 cut(s) 312, 721
Bme1390I CCNGG 4 cut(s) 408, 827, 1085, 1532
Bme18I GGWCC 1 cut(s) 1643
BmeT110I CYCGRG 1 cut(s) 1614
BmgBI CACGTC 1 cut(s) 1309
BmgT120I GGNCC 4 cut(s) 53, 480, 1219, 1643
BmiI GGNNCC 7 cut(s) 404, 421, 618, 1376, 1474, 1625, 1644
BmrFI CCNGG 4 cut(s) 408, 827, 1085, 1532
BmrI ACTGGG 1 cut(s) 665
BmsI GCATC 3 cut(s) 429, 1021, 1471
BmuI ACTGGG 1 cut(s) 665
BplI GAGNNNNNCTC 2 cut(s) 1608, 1640
Bpu10I CCTNAGC 1 cut(s) 1430
BpuEI CTTGAG 5 cut(s) 78, 605, 632, 738, 937
Bsa29I ATCGAT 1 cut(s) 734
BsaHI GRCGYC 1 cut(s) 1203
BsaJI CCNNGG 7 cut(s) 137, 212, 228, 406, 929, 1468, 1615
BsaXI ACNNNNNCTCC 2 cut(s) 1555, 1585
Bsc4I CCNNNNNNNGG 5 cut(s) 399, 429, 692, 832, 1620
Bse118I RCCGGY 3 cut(s) 349, 1001, 1285
Bse1I ACTGG 3 cut(s) 671, 1035, 1583
Bse3DI GCAATG 1 cut(s) 1256
BseBI CCWGG 4 cut(s) 408, 827, 1085, 1532
BseCI ATCGAT 1 cut(s) 734
BseDI CCNNGG 7 cut(s) 137, 212, 228, 406, 929, 1468, 1615
BseGI GGATG 2 cut(s) 345, 385
BseLI CCNNNNNNNGG 5 cut(s) 399, 429, 692, 832, 1620
BseMI GCAATG 1 cut(s) 1256
BseNI ACTGG 3 cut(s) 671, 1035, 1583
BseRI GAGGAG 1 cut(s) 201
BseSI GKGCMC 1 cut(s) 407
BseX3I CGGCCG 1 cut(s) 1287
BseYI CCCAGC 3 cut(s) 55, 1485, 1535
BsgI GTGCAG 2 cut(s) 885, 1027
Bsh1285I CGRYCG 1 cut(s) 1290
BshNI GGYRCC 1 cut(s) 402
BshVI ATCGAT 1 cut(s) 734
BsiEI CGRYCG 1 cut(s) 1290
BsiHKAI GWGCWC 2 cut(s) 627, 1528
BsiHKCI CYCGRG 1 cut(s) 1614
BsiSI CCGG 5 cut(s) 350, 462, 1002, 1200, 1286
BslFI GGGAC 1 cut(s) 1145
BslI CCNNNNNNNGG 5 cut(s) 399, 429, 692, 832, 1620
BsmAI GTCTC 1 cut(s) 1558
BsmFI GGGAC 1 cut(s) 1145
BsmI GAATGC 3 cut(s) 463, 493, 1209
BsoBI CYCGRG 1 cut(s) 1614
Bsp1286I GDGCHC 3 cut(s) 407, 627, 1528
Bsp1407I TGTACA 1 cut(s) 528
Bsp143I GATC 5 cut(s) 97, 563, 580, 763, 1172
BspACI CCGC 7 cut(s) 225, 310, 393, 719, 1217, 1368, 1521
BspDI ATCGAT 1 cut(s) 734
BspHI TCATGA 1 cut(s) 1507
BspLI GGNNCC 7 cut(s) 404, 421, 618, 1376, 1474, 1625, 1644
BspMAI CTGCAG 2 cut(s) 39, 973
BspMI ACCTGC 1 cut(s) 298
BspPI GGATC 2 cut(s) 92, 1167
BspT107I GGYRCC 1 cut(s) 402
BsrDI GCAATG 1 cut(s) 1256
BsrFI RCCGGY 3 cut(s) 349, 1001, 1285
BsrGI TGTACA 1 cut(s) 528
BsrI ACTGG 3 cut(s) 671, 1035, 1583
BssAI RCCGGY 3 cut(s) 349, 1001, 1285
BssECI CCNNGG 7 cut(s) 137, 212, 228, 406, 929, 1468, 1615
BssMI GATC 5 cut(s) 97, 563, 580, 763, 1172
BssNI GRCGYC 1 cut(s) 1203
BssSI CACGAG 1 cut(s) 923
BssT1I CCWWGG 1 cut(s) 929
Bst2BI CACGAG 1 cut(s) 923
Bst2UI CCWGG 4 cut(s) 408, 827, 1085, 1532
Bst4CI ACNGT 2 cut(s) 1588, 1601
Bst6I CTCTTC 1 cut(s) 369
BstACI GRCGYC 1 cut(s) 1203
BstAUI TGTACA 1 cut(s) 528
BstC8I GCNNGC 3 cut(s) 351, 1219, 1287
BstDEI CTNAG 3 cut(s) 157, 179, 1430
BstF5I GGATG 2 cut(s) 345, 385
BstKTI GATC 5 cut(s) 100, 566, 583, 766, 1175
BstMAI GTCTC 1 cut(s) 1558
BstMBI GATC 5 cut(s) 97, 563, 580, 763, 1172
BstMCI CGRYCG 1 cut(s) 1290
BstMWI GCNNNNNNNGC 6 cut(s) 488, 706, 725, 1193, 1374, 1532
BstNI CCWGG 4 cut(s) 408, 827, 1085, 1532
BstNSI RCATGY 3 cut(s) 170, 275, 748
BstSCI CCNGG 4 cut(s) 406, 825, 1083, 1530
BstSFI CTRYAG 3 cut(s) 35, 102, 969
BstSLI GKGCMC 1 cut(s) 407
BstX2I RGATCY 2 cut(s) 97, 1172
BstXI CCANNNNNNTGG 1 cut(s) 1183
BstYI RGATCY 2 cut(s) 97, 1172
BstZI CGGCCG 1 cut(s) 1287
Bsu15I ATCGAT 1 cut(s) 734
BsuTUI ATCGAT 1 cut(s) 734
BtgZI GCGATG 1 cut(s) 232
BtrI CACGTC 1 cut(s) 1309
BtsCI GGATG 2 cut(s) 345, 385
BtsIMutI CAGTG 2 cut(s) 678, 960
BveI ACCTGC 1 cut(s) 298
Cac8I GCNNGC 3 cut(s) 351, 1219, 1287
CaiI CAGNNNCTG 1 cut(s) 62
CciI TCATGA 1 cut(s) 1507
Cfr10I RCCGGY 3 cut(s) 349, 1001, 1285
Cfr13I GGNCC 4 cut(s) 53, 480, 1219, 1643
ClaI ATCGAT 1 cut(s) 734
CseI GACGC 1 cut(s) 1192
Csp6I GTAC 3 cut(s) 233, 529, 680
CviQI GTAC 3 cut(s) 233, 529, 680
DdeI CTNAG 3 cut(s) 157, 179, 1430
DpnI GATC 5 cut(s) 99, 565, 582, 765, 1174
DpnII GATC 5 cut(s) 97, 563, 580, 763, 1172
DraIII CACNNNGTG 1 cut(s) 1319
EaeI YGGCCR 7 cut(s) 311, 720, 910, 1003, 1269, 1287, 1580
EagI CGGCCG 1 cut(s) 1287
Eam1104I CTCTTC 1 cut(s) 369
EarI CTCTTC 1 cut(s) 369
EciI GGCGGA 1 cut(s) 214
EclXI CGGCCG 1 cut(s) 1287
Eco130I CCWWGG 1 cut(s) 929
Eco32I GATATC 1 cut(s) 49
Eco47I GGWCC 1 cut(s) 1643
Eco52I CGGCCG 1 cut(s) 1287
Eco57I CTGAAG 3 cut(s) 102, 382, 1521
Eco88I CYCGRG 1 cut(s) 1614
EcoRII CCWGG 4 cut(s) 406, 825, 1083, 1530
EcoRV GATATC 1 cut(s) 49
EcoT14I CCWWGG 1 cut(s) 929
ErhI CCWWGG 1 cut(s) 929
FaqI GGGAC 1 cut(s) 1145
FauI CCCGC 1 cut(s) 1210
FbaI TGATCA 1 cut(s) 763
FblI GTMKAC 1 cut(s) 105
Fnu4HI GCNGC 2 cut(s) 311, 720
FokI GGATG 2 cut(s) 352, 392
Fsp4HI GCNGC 2 cut(s) 311, 720
FspBI CTAG 4 cut(s) 294, 575, 1398, 1490
GluI GCNGC 2 cut(s) 311, 720
GsaI CCCAGC 3 cut(s) 59, 1489, 1539
HapII CCGG 5 cut(s) 350, 462, 1002, 1200, 1286
HgaI GACGC 1 cut(s) 1192
Hin1I GRCGYC 1 cut(s) 1203
HindIII AAGCTT 1 cut(s) 633
HinfI GANTC 5 cut(s) 731, 801, 965, 992, 1133
HpaII CCGG 5 cut(s) 350, 462, 1002, 1200, 1286
HphI GGTGA 2 cut(s) 1331, 1433
Hpy166II GTNNAC 5 cut(s) 106, 194, 529, 1407, 1424
Hpy188I TCNGA 2 cut(s) 1477, 1652
Hpy188III TCNNGA 9 cut(s) 95, 500, 567, 584, 649, 755, 923, 1442, 1508
Hpy8I GTNNAC 5 cut(s) 106, 194, 529, 1407, 1424
HpyAV CCTTC 4 cut(s) 406, 867, 1033, 1463
HpyCH4III ACNGT 2 cut(s) 1588, 1601
HpyCH4IV ACGT 2 cut(s) 885, 1308
HpyCH4V TGCA 5 cut(s) 14, 37, 902, 971, 1044
HpyF10VI GCNNNNNNNGC 6 cut(s) 488, 706, 725, 1193, 1374, 1532
HpyF3I CTNAG 3 cut(s) 157, 179, 1430
HpySE526I ACGT 2 cut(s) 885, 1308
Hsp92I GRCGYC 1 cut(s) 1203
KroI GCCGGC 2 cut(s) 349, 1285
KroNI GCCGGC 2 cut(s) 351, 1287
Ksp22I TGATCA 1 cut(s) 763
Kzo9I GATC 5 cut(s) 97, 563, 580, 763, 1172
LmnI GCTCC 9 cut(s) 214, 464, 616, 741, 1164, 1374, 1478, 1523, 1629
LweI GCATC 3 cut(s) 429, 1021, 1471
MaeI CTAG 4 cut(s) 294, 575, 1398, 1490
MaeII ACGT 2 cut(s) 885, 1308
MaeIII GTNAC 2 cut(s) 1108, 1571
MalI GATC 5 cut(s) 99, 565, 582, 765, 1174
MboI GATC 5 cut(s) 97, 563, 580, 763, 1172
MfeI CAATTG 1 cut(s) 1242
MflI RGATCY 2 cut(s) 97, 1172
MhlI GDGCHC 3 cut(s) 407, 627, 1528
MlsI TGGCCA 1 cut(s) 1582
MluNI TGGCCA 1 cut(s) 1582
MlyI GAGTC 2 cut(s) 959, 1127
MmeI TCCRAC 4 cut(s) 21, 397, 1022, 1366
Mox20I TGGCCA 1 cut(s) 1582
MroNI GCCGGC 2 cut(s) 349, 1285
MscI TGGCCA 1 cut(s) 1582
MslI CAYNNNNRTG 1 cut(s) 1017
Msp20I TGGCCA 1 cut(s) 1582
MspA1I CMGCKG 2 cut(s) 728, 1217
MspI CCGG 5 cut(s) 350, 462, 1002, 1200, 1286
MspR9I CCNGG 4 cut(s) 408, 827, 1085, 1532
MunI CAATTG 1 cut(s) 1242
Mva1269I GAATGC 3 cut(s) 463, 493, 1209
MvaI CCWGG 4 cut(s) 408, 827, 1085, 1532
MwoI GCNNNNNNNGC 6 cut(s) 488, 706, 725, 1193, 1374, 1532
NaeI GCCGGC 2 cut(s) 351, 1287
NdeII GATC 5 cut(s) 97, 563, 580, 763, 1172
NgoMIV GCCGGC 2 cut(s) 349, 1285
NlaIV GGNNCC 7 cut(s) 404, 421, 618, 1376, 1474, 1625, 1644
NmeAIII GCCGAG 5 cut(s) 118, 193, 253, 1297, 1449
NspI RCATGY 3 cut(s) 170, 275, 748
PagI TCATGA 1 cut(s) 1507
PciI ACATGT 1 cut(s) 166
PctI GAATGC 3 cut(s) 463, 493, 1209
PdiI GCCGGC 2 cut(s) 351, 1287
PfeI GAWTC 3 cut(s) 731, 801, 992
PflMI CCANNNNNTGG 1 cut(s) 832
PkrI GCNGC 2 cut(s) 312, 721
PleI GAGTC 2 cut(s) 959, 1127
PpsI GAGTC 2 cut(s) 959, 1127
PscI ACATGT 1 cut(s) 166
Psp1406I AACGTT 1 cut(s) 885
Psp6I CCWGG 4 cut(s) 406, 825, 1083, 1530
PspFI CCCAGC 3 cut(s) 55, 1485, 1535
PspGI CCWGG 4 cut(s) 406, 825, 1083, 1530
PspN4I GGNNCC 7 cut(s) 404, 421, 618, 1376, 1474, 1625, 1644
PspPI GGNCC 4 cut(s) 53, 480, 1219, 1643
PsrI GAACNNNNNNTAC 4 cut(s) 156, 188, 252, 284
PstI CTGCAG 2 cut(s) 39, 973
PstNI CAGNNNCTG 1 cut(s) 62
PsuI RGATCY 2 cut(s) 97, 1172
PvuII CAGCTG 1 cut(s) 728
RsaI GTAC 3 cut(s) 234, 530, 681
RsaNI GTAC 3 cut(s) 233, 529, 680
RseI CAYNNNNRTG 1 cut(s) 1017
SatI GCNGC 2 cut(s) 311, 720
Sau3AI GATC 5 cut(s) 97, 563, 580, 763, 1172
Sau96I GGNCC 4 cut(s) 53, 480, 1219, 1643
SchI GAGTC 2 cut(s) 959, 1127
ScrFI CCNGG 4 cut(s) 408, 827, 1085, 1532
SduI GDGCHC 3 cut(s) 407, 627, 1528
SfaNI GCATC 3 cut(s) 429, 1021, 1471
SfcI CTRYAG 3 cut(s) 35, 102, 969
SinI GGWCC 1 cut(s) 1643
SmiMI CAYNNNNRTG 1 cut(s) 1017
SmlI CTYRAG 5 cut(s) 93, 584, 647, 753, 952
SmoI CTYRAG 5 cut(s) 93, 584, 647, 753, 952
SsiI CCGC 7 cut(s) 225, 310, 393, 719, 1217, 1368, 1521
SspI AATATT 1 cut(s) 326
SspMI CTAG 4 cut(s) 294, 575, 1398, 1490
StyD4I CCNGG 4 cut(s) 406, 825, 1083, 1530
StyI CCWWGG 1 cut(s) 929
TaaI ACNGT 2 cut(s) 1588, 1601
TaiI ACGT 2 cut(s) 888, 1311
TaqI TCGA 1 cut(s) 734
TatI WGTACW 1 cut(s) 528
TauI GCSGC 2 cut(s) 313, 722
TfiI GAWTC 3 cut(s) 731, 801, 992
TscAI CASTG 2 cut(s) 678, 967
TspRI CASTG 2 cut(s) 678, 967
Van91I CCANNNNNTGG 1 cut(s) 832
VpaK11BI GGWCC 1 cut(s) 1643
XapI RAATTY 2 cut(s) 278, 362
XceI RCATGY 3 cut(s) 170, 275, 748
XcmI CCANNNNNNNNNTGG 1 cut(s) 1320
XmiI GTMKAC 1 cut(s) 105
XspI CTAG 4 cut(s) 294, 575, 1398, 1490
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.