Uncharacterized protein K02A2.6-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_1 | PF00078 | 182 - 344 | 1.7e-32 | Reverse transcriptase (RNA-dependent DNA polymerase) |
| RT_RNaseH_2 | PF17919 | 409 - 503 | 5e-20 | RNase H-like domain found in reverse transcriptase |
| RT_RNaseH | PF17917 | 438 - 538 | 4e-16 | RNase H-like domain found in reverse transcriptase |
| RVT_3 | PF13456 | 606 - 724 | 8.3e-21 | Reverse transcriptase-like |
| Integrase_H2C2 | PF17921 | 821 - 874 | 2e-07 | Integrase zinc binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 500 |
| AarI | CACCTGC | 1 cut(s) | 1865 |
| AasI | GACNNNNNNGTC | 3 cut(s) | 890, 893, 2279 |
| AatII | GACGTC | 2 cut(s) | 2548, 3387 |
| Acc36I | ACCTGC | 1 cut(s) | 1865 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 457, 3450 |
| AccI | GTMKAC | 1 cut(s) | 2451 |
| AccIII | TCCGGA | 2 cut(s) | 136, 546 |
| AcoI | YGGCCR | 3 cut(s) | 981, 1842, 3168 |
| AcsI | RAATTY | 2 cut(s) | 317, 1135 |
| AcuI | CTGAAG | 5 cut(s) | 39, 741, 821, 2816, 3449 |
| AcvI | CACGTG | 1 cut(s) | 2135 |
| AcyI | GRCGYC | 5 cut(s) | 1980, 2545, 3017, 3317, 3384 |
| AfeI | AGCGCT | 2 cut(s) | 2356, 3164 |
| AflII | CTTAAG | 1 cut(s) | 3151 |
| AflIII | ACRYGT | 1 cut(s) | 1500 |
| AgeI | ACCGGT | 1 cut(s) | 3299 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1961 |
| AjiI | CACGTC | 1 cut(s) | 889 |
| AjnI | CCWGG | 2 cut(s) | 754, 2094 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 212, 244 |
| AleI | CACNNNNGTG | 1 cut(s) | 1038 |
| AluBI | AGCT | 9 cut(s) | 166, 1321, 1456, 2014, 2029, 2092, 2161, 2465, 2516 |
| AluI | AGCT | 9 cut(s) | 166, 1321, 1456, 2014, 2029, 2092, 2161, 2465, 2516 |
| Alw21I | GWGCWC | 4 cut(s) | 2094, 2163, 2490, 3144 |
| Alw26I | GTCTC | 5 cut(s) | 262, 440, 582, 906, 1424 |
| Alw44I | GTGCAC | 1 cut(s) | 2486 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 457, 2032, 3476 |
| Aor13HI | TCCGGA | 2 cut(s) | 136, 546 |
| Aor51HI | AGCGCT | 2 cut(s) | 2356, 3164 |
| ApaLI | GTGCAC | 1 cut(s) | 2486 |
| ApeKI | GCWGC | 6 cut(s) | 750, 1334, 1353, 2059, 2150, 2734 |
| ApoI | RAATTY | 2 cut(s) | 317, 1135 |
| AseI | ATTAAT | 2 cut(s) | 1080, 3066 |
| AsiGI | ACCGGT | 1 cut(s) | 3299 |
| AsiSI | GCGATCGC | 1 cut(s) | 1659 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2390 |
| AspS9I | GGNCC | 7 cut(s) | 411, 1051, 1942, 2098, 2519, 2624, 3332 |
| AsuC2I | CCSGG | 5 cut(s) | 357, 980, 1561, 1871, 1985 |
| AvaII | GGWCC | 4 cut(s) | 1051, 2098, 2519, 3332 |
| AxyI | CCTNAGG | 1 cut(s) | 1056 |
| BaeGI | GKGCMC | 1 cut(s) | 2490 |
| BamHI | GGATCC | 3 cut(s) | 1308, 2316, 3463 |
| BanII | GRGCYC | 3 cut(s) | 2094, 2163, 2298 |
| BbrPI | CACGTG | 1 cut(s) | 2135 |
| BbsI | GAAGAC | 3 cut(s) | 354, 732, 3153 |
| Bbv12I | GWGCWC | 4 cut(s) | 2094, 2163, 2490, 3144 |
| BbvCI | CCTCAGC | 1 cut(s) | 1406 |
| BbvI | GCAGC | 6 cut(s) | 737, 1346, 1365, 2046, 2137, 2746 |
| BccI | CCATC | 8 cut(s) | 1686, 1814, 2423, 2669, 2724, 3318, 3383, 3408 |
| BceAI | ACGGC | 5 cut(s) | 775, 1395, 2638, 3004, 3215 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 80, 114, 1342, 1376, 2041, 2075 |
| BciT130I | CCWGG | 2 cut(s) | 756, 2096 |
| BcnI | CCSGG | 5 cut(s) | 357, 980, 1561, 1871, 1985 |
| BcoDI | GTCTC | 5 cut(s) | 262, 440, 582, 906, 1424 |
| BfaI | CTAG | 4 cut(s) | 275, 282, 314, 2565 |
| BfmI | CTRYAG | 5 cut(s) | 693, 1164, 1796, 2175, 2732 |
| BfoI | RGCGCY | 5 cut(s) | 182, 1604, 2358, 2814, 3166 |
| BfrI | CTTAAG | 1 cut(s) | 3151 |
| BfuAI | ACCTGC | 1 cut(s) | 1865 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 1271, 1584 |
| BglII | AGATCT | 1 cut(s) | 1770 |
| BmcAI | AGTACT | 1 cut(s) | 2854 |
| Bme1390I | CCNGG | 7 cut(s) | 357, 756, 980, 1561, 1871, 1985, 2096 |
| Bme18I | GGWCC | 4 cut(s) | 1051, 2098, 2519, 3332 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1961 |
| BmgBI | CACGTC | 1 cut(s) | 889 |
| BmgT120I | GGNCC | 7 cut(s) | 411, 1051, 1942, 2098, 2519, 2624, 3332 |
| BmrFI | CCNGG | 7 cut(s) | 357, 756, 980, 1561, 1871, 1985, 2096 |
| BmrI | ACTGGG | 1 cut(s) | 3438 |
| BmuI | ACTGGG | 1 cut(s) | 3438 |
| BpiI | GAAGAC | 3 cut(s) | 354, 732, 3153 |
| BpmI | CTGGAG | 5 cut(s) | 156, 2250, 2312, 3377, 3453 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1406 |
| BpuEI | CTTGAG | 3 cut(s) | 953, 1350, 1591 |
| BpuMI | CCSGG | 5 cut(s) | 357, 980, 1561, 1871, 1985 |
| BsaAI | YACGTR | 2 cut(s) | 2135, 2204 |
| BsaBI | GATNNNNATC | 2 cut(s) | 878, 3399 |
| BsaHI | GRCGYC | 5 cut(s) | 1980, 2545, 3017, 3317, 3384 |
| BsaI | GGTCTC | 2 cut(s) | 262, 440 |
| BsaJI | CCNNGG | 7 cut(s) | 105, 198, 609, 754, 1094, 1802, 2672 |
| BsaWI | WCCGGW | 4 cut(s) | 136, 546, 712, 3299 |
| Bse118I | RCCGGY | 4 cut(s) | 809, 1844, 2415, 3299 |
| Bse1I | ACTGG | 7 cut(s) | 385, 629, 1283, 1962, 2295, 3360, 3444 |
| Bse21I | CCTNAGG | 1 cut(s) | 1056 |
| Bse3DI | GCAATG | 3 cut(s) | 96, 1190, 3135 |
| Bse8I | GATNNNNATC | 2 cut(s) | 878, 3399 |
| BseAI | TCCGGA | 2 cut(s) | 136, 546 |
| BseBI | CCWGG | 2 cut(s) | 756, 2096 |
| BseDI | CCNNGG | 7 cut(s) | 105, 198, 609, 754, 1094, 1802, 2672 |
| BseJI | GATNNNNATC | 2 cut(s) | 878, 3399 |
| BseMI | GCAATG | 3 cut(s) | 96, 1190, 3135 |
| BseMII | CTCAG | 8 cut(s) | 207, 917, 946, 1047, 1187, 1420, 1544, 2180 |
| BseNI | ACTGG | 7 cut(s) | 385, 629, 1283, 1962, 2295, 3360, 3444 |
| BseSI | GKGCMC | 1 cut(s) | 2490 |
| BseXI | GCAGC | 6 cut(s) | 737, 1346, 1365, 2046, 2137, 2746 |
| BseYI | CCCAGC | 3 cut(s) | 2010, 2688, 3491 |
| Bsh1285I | CGRYCG | 5 cut(s) | 94, 1659, 2458, 3304, 3421 |
| BshTI | ACCGGT | 1 cut(s) | 3299 |
| BsiEI | CGRYCG | 5 cut(s) | 94, 1659, 2458, 3304, 3421 |
| BsiHKAI | GWGCWC | 4 cut(s) | 2094, 2163, 2490, 3144 |
| BsiWI | CGTACG | 1 cut(s) | 3021 |
| BslFI | GGGAC | 6 cut(s) | 247, 1025, 1037, 1543, 2000, 3345 |
| BsmAI | GTCTC | 5 cut(s) | 262, 440, 582, 906, 1424 |
| BsmFI | GGGAC | 6 cut(s) | 247, 1025, 1037, 1543, 2000, 3345 |
| BsmI | GAATGC | 1 cut(s) | 2588 |
| Bso31I | GGTCTC | 2 cut(s) | 262, 440 |
| Bsp1286I | GDGCHC | 5 cut(s) | 2094, 2163, 2298, 2490, 3144 |
| Bsp13I | TCCGGA | 2 cut(s) | 136, 546 |
| Bsp19I | CCATGG | 1 cut(s) | 1802 |
| BspCNI | CTCAG | 8 cut(s) | 208, 916, 945, 1048, 1188, 1419, 1543, 2179 |
| BspEI | TCCGGA | 2 cut(s) | 136, 546 |
| BspMAI | CTGCAG | 3 cut(s) | 697, 1168, 2736 |
| BspMI | ACCTGC | 1 cut(s) | 1865 |
| BspTI | CTTAAG | 1 cut(s) | 3151 |
| BspTNI | GGTCTC | 2 cut(s) | 262, 440 |
| BsrDI | GCAATG | 3 cut(s) | 96, 1190, 3135 |
| BsrFI | RCCGGY | 4 cut(s) | 809, 1844, 2415, 3299 |
| BsrI | ACTGG | 7 cut(s) | 385, 629, 1283, 1962, 2295, 3360, 3444 |
| BssAI | RCCGGY | 4 cut(s) | 809, 1844, 2415, 3299 |
| BssECI | CCNNGG | 7 cut(s) | 105, 198, 609, 754, 1094, 1802, 2672 |
| BssNI | GRCGYC | 5 cut(s) | 1980, 2545, 3017, 3317, 3384 |
| BssT1I | CCWWGG | 5 cut(s) | 105, 198, 609, 1802, 2672 |
| Bst2UI | CCWGG | 2 cut(s) | 756, 2096 |
| Bst6I | CTCTTC | 2 cut(s) | 141, 462 |
| BstACI | GRCGYC | 5 cut(s) | 1980, 2545, 3017, 3317, 3384 |
| BstAFI | CTTAAG | 1 cut(s) | 3151 |
| BstBAI | YACGTR | 2 cut(s) | 2135, 2204 |
| BstDSI | CCRYGG | 2 cut(s) | 1094, 1802 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2682 |
| BstH2I | RGCGCY | 5 cut(s) | 182, 1604, 2358, 2814, 3166 |
| BstMAI | GTCTC | 5 cut(s) | 262, 440, 582, 906, 1424 |
| BstMCI | CGRYCG | 5 cut(s) | 94, 1659, 2458, 3304, 3421 |
| BstNI | CCWGG | 2 cut(s) | 756, 2096 |
| BstNSI | RCATGY | 5 cut(s) | 355, 955, 1394, 1485, 1504 |
| BstSCI | CCNGG | 7 cut(s) | 355, 754, 978, 1559, 1869, 1983, 2094 |
| BstSFI | CTRYAG | 5 cut(s) | 693, 1164, 1796, 2175, 2732 |
| BstSLI | GKGCMC | 1 cut(s) | 2490 |
| BstV1I | GCAGC | 6 cut(s) | 737, 1346, 1365, 2046, 2137, 2746 |
| BstV2I | GAAGAC | 3 cut(s) | 354, 732, 3153 |
| BstX2I | RGATCY | 7 cut(s) | 928, 1308, 1770, 2260, 2316, 2504, 3463 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1040, 2831 |
| BstYI | RGATCY | 7 cut(s) | 928, 1308, 1770, 2260, 2316, 2504, 3463 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1056 |
| BtgI | CCRYGG | 2 cut(s) | 1094, 1802 |
| BtgZI | GCGATG | 4 cut(s) | 907, 1510, 3337, 3386 |
| BtrI | CACGTC | 1 cut(s) | 889 |
| BtsI | GCAGTG | 1 cut(s) | 3006 |
| BtsIMutI | CAGTG | 6 cut(s) | 271, 527, 2757, 2972, 3006, 3451 |
| BveI | ACCTGC | 1 cut(s) | 1865 |
| CaiI | CAGNNNCTG | 3 cut(s) | 457, 2032, 3476 |
| Cfr10I | RCCGGY | 4 cut(s) | 809, 1844, 2415, 3299 |
| Cfr13I | GGNCC | 7 cut(s) | 411, 1051, 1942, 2098, 2519, 2624, 3332 |
| CseI | GACGC | 7 cut(s) | 1106, 1349, 1969, 2216, 3025, 3238, 3325 |
| CspAI | ACCGGT | 1 cut(s) | 3299 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1269, 1304, 3113, 3148 |
| DrdI | GACNNNNNNGTC | 3 cut(s) | 890, 893, 2279 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1961 |
| DseDI | GACNNNNNNGTC | 3 cut(s) | 890, 893, 2279 |
| EaeI | YGGCCR | 3 cut(s) | 981, 1842, 3168 |
| Eam1104I | CTCTTC | 2 cut(s) | 141, 462 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1961 |
| EarI | CTCTTC | 2 cut(s) | 141, 462 |
| EciI | GGCGGA | 1 cut(s) | 2329 |
| Ecl136II | GAGCTC | 2 cut(s) | 2092, 2161 |
| Eco130I | CCWWGG | 5 cut(s) | 105, 198, 609, 1802, 2672 |
| Eco147I | AGGCCT | 1 cut(s) | 2804 |
| Eco24I | GRGCYC | 3 cut(s) | 2094, 2163, 2298 |
| Eco31I | GGTCTC | 2 cut(s) | 262, 440 |
| Eco32I | GATATC | 1 cut(s) | 3397 |
| Eco47I | GGWCC | 4 cut(s) | 1051, 2098, 2519, 3332 |
| Eco47III | AGCGCT | 2 cut(s) | 2356, 3164 |
| Eco53kI | GAGCTC | 2 cut(s) | 2092, 2161 |
| Eco57I | CTGAAG | 5 cut(s) | 39, 741, 821, 2816, 3449 |
| Eco72I | CACGTG | 1 cut(s) | 2135 |
| Eco81I | CCTNAGG | 1 cut(s) | 1056 |
| EcoICRI | GAGCTC | 2 cut(s) | 2092, 2161 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2682 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1051, 1942, 3332 |
| EcoRI | GAATTC | 1 cut(s) | 317 |
| EcoRII | CCWGG | 2 cut(s) | 754, 2094 |
| EcoRV | GATATC | 1 cut(s) | 3397 |
| EcoT14I | CCWWGG | 5 cut(s) | 105, 198, 609, 1802, 2672 |
| EcoT22I | ATGCAT | 2 cut(s) | 486, 1087 |
| EcoT38I | GRGCYC | 3 cut(s) | 2094, 2163, 2298 |
| ErhI | CCWWGG | 5 cut(s) | 105, 198, 609, 1802, 2672 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 212, 244, 314, 346 |
| FaqI | GGGAC | 6 cut(s) | 247, 1025, 1037, 1543, 2000, 3345 |
| FauI | CCCGC | 3 cut(s) | 757, 3218, 3225 |
| FblI | GTMKAC | 1 cut(s) | 2451 |
| FriOI | GRGCYC | 3 cut(s) | 2094, 2163, 2298 |
| FspBI | CTAG | 4 cut(s) | 275, 282, 314, 2565 |
| GsaI | CCCAGC | 3 cut(s) | 2014, 2692, 3495 |
| GsuI | CTGGAG | 5 cut(s) | 156, 2250, 2312, 3377, 3453 |
| HaeII | RGCGCY | 5 cut(s) | 182, 1604, 2358, 2814, 3166 |
| HgaI | GACGC | 7 cut(s) | 1106, 1349, 1969, 2216, 3025, 3238, 3325 |
| Hin1I | GRCGYC | 5 cut(s) | 1980, 2545, 3017, 3317, 3384 |
| HincII | GTYRAC | 1 cut(s) | 304 |
| HindII | GTYRAC | 1 cut(s) | 304 |
| Hpy166II | GTNNAC | 9 cut(s) | 304, 619, 1033, 1440, 2138, 2452, 2488, 3073, 3315 |
| Hpy188I | TCNGA | 6 cut(s) | 840, 1533, 1609, 2543, 2796, 3429 |
| Hpy8I | GTNNAC | 9 cut(s) | 304, 619, 1033, 1440, 2138, 2452, 2488, 3073, 3315 |
| Hsp92I | GRCGYC | 5 cut(s) | 1980, 2545, 3017, 3317, 3384 |
| KflI | GGGWCCC | 1 cut(s) | 3332 |
| Kpn2I | TCCGGA | 2 cut(s) | 136, 546 |
| KroI | GCCGGC | 2 cut(s) | 1844, 2415 |
| KroNI | GCCGGC | 2 cut(s) | 1846, 2417 |
| LmnI | GCTCC | 8 cut(s) | 175, 1623, 2097, 2122, 2293, 3139, 3358, 3490 |
| Lsp1109I | GCAGC | 6 cut(s) | 737, 1346, 1365, 2046, 2137, 2746 |
| MaeI | CTAG | 4 cut(s) | 275, 282, 314, 2565 |
| MaeIII | GTNAC | 5 cut(s) | 363, 380, 387, 2003, 2141 |
| MfeI | CAATTG | 1 cut(s) | 2085 |
| MflI | RGATCY | 7 cut(s) | 928, 1308, 1770, 2260, 2316, 2504, 3463 |
| MhlI | GDGCHC | 5 cut(s) | 2094, 2163, 2298, 2490, 3144 |
| MlyI | GAGTC | 4 cut(s) | 579, 1729, 2000, 3093 |
| MmeI | TCCRAC | 2 cut(s) | 1924, 2566 |
| Mph1103I | ATGCAT | 2 cut(s) | 486, 1087 |
| MreI | CGCCGGCG | 1 cut(s) | 2415 |
| MroI | TCCGGA | 2 cut(s) | 136, 546 |
| MroNI | GCCGGC | 2 cut(s) | 1844, 2415 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2390 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1038, 1445, 1912, 2651 |
| MspA1I | CMGCKG | 4 cut(s) | 176, 750, 907, 1687 |
| MspCI | CTTAAG | 1 cut(s) | 3151 |
| MspR9I | CCNGG | 7 cut(s) | 357, 756, 980, 1561, 1871, 1985, 2096 |
| MunI | CAATTG | 1 cut(s) | 2085 |
| Mva1269I | GAATGC | 1 cut(s) | 2588 |
| MvaI | CCWGG | 2 cut(s) | 756, 2096 |
| NaeI | GCCGGC | 2 cut(s) | 1846, 2417 |
| NciI | CCSGG | 5 cut(s) | 357, 980, 1561, 1871, 1985 |
| NcoI | CCATGG | 1 cut(s) | 1802 |
| NgoMIV | GCCGGC | 2 cut(s) | 1844, 2415 |
| NmuCI | GTSAC | 3 cut(s) | 363, 380, 2003 |
| NsiI | ATGCAT | 2 cut(s) | 486, 1087 |
| NspI | RCATGY | 5 cut(s) | 355, 955, 1394, 1485, 1504 |
| OliI | CACNNNNGTG | 1 cut(s) | 1038 |
| PaeI | GCATGC | 3 cut(s) | 955, 1394, 1485 |
| PaqCI | CACCTGC | 1 cut(s) | 1865 |
| PceI | AGGCCT | 1 cut(s) | 2804 |
| PciI | ACATGT | 1 cut(s) | 1500 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 891, 1533 |
| PctI | GAATGC | 1 cut(s) | 2588 |
| PdiI | GCCGGC | 2 cut(s) | 1846, 2417 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2390 |
| PfeI | GAWTC | 8 cut(s) | 454, 595, 709, 835, 1854, 2077, 2348, 2938 |
| Pfl23II | CGTACG | 1 cut(s) | 3021 |
| PflFI | GACNNNGTC | 1 cut(s) | 890 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 457, 3450 |
| PfoI | TCCNGGA | 2 cut(s) | 1983, 2094 |
| PinAI | ACCGGT | 1 cut(s) | 3299 |
| Ple19I | CGATCG | 2 cut(s) | 94, 1659 |
| PleI | GAGTC | 4 cut(s) | 578, 1729, 2000, 3092 |
| PmaCI | CACGTG | 1 cut(s) | 2135 |
| PmlI | CACGTG | 1 cut(s) | 2135 |
| PpsI | GAGTC | 4 cut(s) | 578, 1729, 2000, 3092 |
| Ppu21I | YACGTR | 2 cut(s) | 2135, 2204 |
| PpuMI | RGGWCCY | 2 cut(s) | 1051, 3332 |
| PscI | ACATGT | 1 cut(s) | 1500 |
| PshBI | ATTAAT | 2 cut(s) | 1080, 3066 |
| PsiI | TTATAA | 1 cut(s) | 500 |
| Psp124BI | GAGCTC | 2 cut(s) | 2094, 2163 |
| Psp5II | RGGWCCY | 2 cut(s) | 1051, 3332 |
| Psp6I | CCWGG | 2 cut(s) | 754, 2094 |
| PspCI | CACGTG | 1 cut(s) | 2135 |
| PspFI | CCCAGC | 3 cut(s) | 2010, 2688, 3491 |
| PspGI | CCWGG | 2 cut(s) | 754, 2094 |
| PspLI | CGTACG | 1 cut(s) | 3021 |
| PspPI | GGNCC | 7 cut(s) | 411, 1051, 1942, 2098, 2519, 2624, 3332 |
| PspPPI | RGGWCCY | 2 cut(s) | 1051, 3332 |
| PstI | CTGCAG | 3 cut(s) | 697, 1168, 2736 |
| PstNI | CAGNNNCTG | 3 cut(s) | 457, 2032, 3476 |
| PsuI | RGATCY | 7 cut(s) | 928, 1308, 1770, 2260, 2316, 2504, 3463 |
| PsyI | GACNNNGTC | 1 cut(s) | 890 |
| PvuI | CGATCG | 2 cut(s) | 94, 1659 |
| RgaI | GCGATCGC | 1 cut(s) | 1659 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1038, 1445, 1912, 2651 |
| SacI | GAGCTC | 2 cut(s) | 2094, 2163 |
| Sau96I | GGNCC | 7 cut(s) | 411, 1051, 1942, 2098, 2519, 2624, 3332 |
| ScaI | AGTACT | 1 cut(s) | 2854 |
| SchI | GAGTC | 4 cut(s) | 579, 1729, 2000, 3093 |
| ScrFI | CCNGG | 7 cut(s) | 357, 756, 980, 1561, 1871, 1985, 2096 |
| SduI | GDGCHC | 5 cut(s) | 2094, 2163, 2298, 2490, 3144 |
| SfaAI | GCGATCGC | 1 cut(s) | 1659 |
| SfcI | CTRYAG | 5 cut(s) | 693, 1164, 1796, 2175, 2732 |
| SgfI | GCGATCGC | 1 cut(s) | 1659 |
| SgrAI | CRCCGGYG | 2 cut(s) | 809, 2415 |
| SinI | GGWCC | 4 cut(s) | 1051, 2098, 2519, 3332 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1038, 1445, 1912, 2651 |
| SmlI | CTYRAG | 4 cut(s) | 968, 1365, 1570, 3151 |
| SmoI | CTYRAG | 4 cut(s) | 968, 1365, 1570, 3151 |
| SphI | GCATGC | 3 cut(s) | 955, 1394, 1485 |
| SseBI | AGGCCT | 1 cut(s) | 2804 |
| SspMI | CTAG | 4 cut(s) | 275, 282, 314, 2565 |
| SstI | GAGCTC | 2 cut(s) | 2094, 2163 |
| StuI | AGGCCT | 1 cut(s) | 2804 |
| StyD4I | CCNGG | 7 cut(s) | 355, 754, 978, 1559, 1869, 1983, 2094 |
| StyI | CCWWGG | 5 cut(s) | 105, 198, 609, 1802, 2672 |
| TaqII | GACCGA | 1 cut(s) | 1550 |
| TatI | WGTACW | 3 cut(s) | 1699, 1916, 2852 |
| TauI | GCSGC | 4 cut(s) | 179, 1581, 3173, 3322 |
| TfiI | GAWTC | 8 cut(s) | 454, 595, 709, 835, 1854, 2077, 2348, 2938 |
| TscAI | CASTG | 6 cut(s) | 271, 527, 2764, 2979, 3013, 3451 |
| TseFI | GTSAC | 3 cut(s) | 363, 380, 2003 |
| TseI | GCWGC | 6 cut(s) | 750, 1334, 1353, 2059, 2150, 2734 |
| Tsp45I | GTSAC | 3 cut(s) | 363, 380, 2003 |
| TspGWI | ACGGA | 3 cut(s) | 1111, 1847, 2847 |
| TspRI | CASTG | 6 cut(s) | 271, 527, 2764, 2979, 3013, 3451 |
| Tth111I | GACNNNGTC | 1 cut(s) | 890 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 457, 3450 |
| Vha464I | CTTAAG | 1 cut(s) | 3151 |
| VneI | GTGCAC | 1 cut(s) | 2486 |
| VpaK11BI | GGWCC | 4 cut(s) | 1051, 2098, 2519, 3332 |
| VspI | ATTAAT | 2 cut(s) | 1080, 3066 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2682 |
| XapI | RAATTY | 2 cut(s) | 317, 1135 |
| XceI | RCATGY | 5 cut(s) | 355, 955, 1394, 1485, 1504 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 854 |
| XmiI | GTMKAC | 1 cut(s) | 2451 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2390 |
| XspI | CTAG | 4 cut(s) | 275, 282, 314, 2565 |
| ZraI | GACGTC | 2 cut(s) | 2546, 3385 |
| ZrmI | AGTACT | 1 cut(s) | 2854 |
| Zsp2I | ATGCAT | 2 cut(s) | 486, 1087 |