Rw1G007920

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000160
Physical Location & Seq
Reverse (-)
17007028 .. 17009403
2376 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G007920.1

Sequence Viewer

Length: 1251 bp
ATGGAACGTTTATTAAAGGCCGATTTTATTCGAACGGCCAGGTATGTTGAATGGTTATCTAATATTGTGCGAGTAAGGAAAAAGAATGGTAAGATGCTCATATGTGTTGATTTTCGAAATCTAAACTTAGCCACACCCAAGGATGAATACTCAATACCCATGGCCGACTTGCTTGTGGATGGTGCGGCCAAACATGAAATCCTTTCTTTCATGGACGGGCATGTTGGATACAACCAAATCTTTATAGCCAAGAAAGATGTGCACAAAACGGTGTTCAGATGCCCGGGCGCAATAAGAACATTTGAGTGGTTCGCCGAAGATGAGTTTGTTTGGAAAACAGAGCACCAAGCGGCATTCGACCTACTTAAGCAATACTTATCAAACCCACCCGTCTTGGTACCCCCAGTGCGTGAAAGGCCTTTGAAGTTATACATATCGGCATCAGATAACTCAATAGGAAGCCTACTAGCGCAAGATAAAGACAATGGCAAGGAATGTGCTGTGCATTACTTGAGCCGAATCCTCACCGATGTGGAAACTCGGTACACGCCTATTGAGAGGCTTTGTCTTGCATTATTCTTTTCTGCAATCAGGCTTCGGCACTACAGGTTACCCTCGGTCATCCAAGATGTTTTTGTTATCGACATCGAGCCAAATGATTGGAGACTCCCTATCATCAAGTTCCACAAAAATCCTCAAGGCAATCATGATCGGAAGACTCGGTACTTGGCTGGACATTTCGTTATATACAAAGAAGCAGTATATCGCAAAACCTCCGATGATCTACTCCTTGTTTATATAGGGGGGCAAGAAACTTTGGAAGTCATGAGAGATGTCCACGAGGGGATATGTGGTGCACATCAGGCCGGAATCAAAATGAGGTGGTTAATTCGAAAGCACGATTTCTACTGGCCGACAATTCTAAAGGATTACATTGAATTTGCAAAGAGCTGCAAGAAATGTCAAATTCATGCACCTGTTCAAAGAGTTCCGGCCGACGTCCTCCATCCAATTGTTAAGCCATGGCCGTTTCGAGGTTGGGCCATGGATATTATAGGGAGTATTAGACCACCATCATCAAAACAACACGTATGGATTTTGGTTGCCACTGATTATTTCACTAAATGGGTAGAGGCAAAACCATACGTCACTATTTCTAGTCAGACAGTGATCAAATTTATGGAAGAAAACATTATACACAGGTTTGGGATACCTAAAACCATAACGGCTGACAGGGTTCAGTTTTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

416

Amino Acids

48.44

Weight (kDa)

9.21

Isoelectric Point (pI)

31.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RT_RNaseH_2 PF17919 111 - 202 2.3e-22 RNase H-like domain found in reverse transcriptase
RT_RNaseH PF17917 138 - 202 9.9e-13 RNase H-like domain found in reverse transcriptase
Integrase_H2C2 PF17921 271 - 325 9.7e-09 Integrase zinc binding domain
rve PF00665 343 - 412 1.6e-06 Integrase core domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000160)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g11612 FvH4_2g25851 FvH4_3g22802 FvH4_3g22805 FvH4_3g31361 FvH4_3g31382 FvH4_4g05272 FvH4_4g05273 FvH4_4g14567 FvH4_4g15161 FvH4_5g22540 FvH4_6g13113 FvH4_6g31923 FvH4_6g31924 FvH4_6g33651 FvH4_6g45122 FvH4_7g03662
pyrus_communis pycom01g04240 pycom01g24010 pycom02g18210 pycom02g19420 pycom05g06510 pycom09g15750 pycom09g18940 pycom12g02580 pycom12g03100 pycom12g08310 pycom13g22710 pycom13g28060 pycom16g18340 pycom16g18350 pycom16g24880 pycom16g26240 pycom461g00260 pycom520g00980 pycom520g01320
rosa_chinensis RchiOBHm_Chr1g0320731 RchiOBHm_Chr2g0102771 RchiOBHm_Chr3g0462151 RchiOBHm_Chr5g0038141 RchiOBHm_Chr5g0069371 RchiOBHm_Chr7g0239101
rosa_multiflora Rmu_co8038252.1_g000001 Rmu_co8138412.1_g000001 Rmu_co8331087.1_g000001 Rmu_co8479311.1_g000001 Rmu_sc0000112.1_g000018 Rmu_sc0000346.1_g000012 Rmu_sc0002102.1_g000002 Rmu_sc0003505.1_g000013 Rmu_sc0004249.1_g000007 Rmu_sc0004448.1_g000010 Rmu_sc0004594.1_g000011 Rmu_sc0004915.1_g000010 Rmu_sc0008019.1_g000019 Rmu_sc0008303.1_g000001 Rmu_sc0008355.1_g000005 Rmu_sc0009253.1_g000018 Rmu_sc0010211.1_g000002 Rmu_sc0010252.1_g000009 Rmu_sc0011534.1_g000008 Rmu_sc0014811.1_g000009 Rmu_sc0019475.1_g000001 Rmu_sc0024897.1_g000001 Rmu_sc0024898.1_g000001 Rmu_sc0031791.1_g000001 Rmu_sc0038715.1_g000001
rosa_roxburghii Rroxscaffold_165G00436940 Rroxscaffold_174G00435270 Rroxscaffold_177G00434330 Rroxscaffold_177G00434340 Rroxscaffold_177G00434350 Rroxscaffold_1G00002160 Rroxscaffold_1G00025260 Rroxscaffold_1G00042950 Rroxscaffold_1G00068010 Rroxscaffold_2G00107530 Rroxscaffold_3G00221190 Rroxscaffold_3G00221520 Rroxscaffold_3G00223200 Rroxscaffold_4G00322230 Rroxscaffold_4G00331810 Rroxscaffold_5G00385150 Rroxscaffold_5G00387510 Rroxscaffold_6G00410520 Rroxscaffold_6G00423360 Rroxscaffold_6G00423370 Rroxscaffold_6G00429210 Rroxscaffold_7G00158300 Rroxscaffold_7G00163480 Rroxscaffold_7G00171410 Rroxscaffold_7G00178940 Rroxscaffold_7G00199480 Rroxscaffold_7G00205630 Rroxscaffold_7G00207440
rosa_rugosa Rorug01G0056400 Rorug04G0063900 Rorug05G0251400 Rorug07G0221900
rosa_samantha Rh1DG169400 Rh2AG292900 Rh2DG519200 Rh4DG260600 Rh5AG042600 Rh6BG117500
rosa_wichuraiana Rw0G001900 Rw0G005150 Rw0G006380 Rw0G015140 Rw0G016320 Rw0G019440 Rw0G019840 Rw0G023740 Rw1G001590 Rw1G002180 Rw1G003560 Rw1G004280 Rw1G006110 Rw1G006680 Rw1G007920 Rw1G008480 Rw1G009120 Rw1G010310 Rw1G014900 Rw1G019650 Rw1G022070 Rw1G022170 Rw1G041570 Rw2G002740 Rw2G005760 Rw2G032370 Rw2G046770 Rw2G050600 Rw2G051420 Rw3G015930 Rw3G016280 Rw3G019580 Rw3G028420 Rw4G003430 Rw4G005350 Rw4G007530 Rw4G008150 Rw4G009580 Rw4G010250 Rw4G015800 Rw4G017000 Rw4G017910 Rw4G018510 Rw4G019700 Rw4G031010 Rw5G012650 Rw5G020140 Rw5G022060 Rw5G034420 Rw5G035560 Rw5G043010 Rw5G046750 Rw5G047340 Rw5G049500 Rw6G001390 Rw6G002210 Rw6G004530 Rw6G004770 Rw6G005100 Rw6G005890 Rw6G011860 Rw6G014680 Rw6G019480 Rw6G028970 Rw6G033800 Rw7G013050 Rw7G014800 Rw7G025760 Rw7G025850 Rw7G026730 Rw7G026870 Rw7G036330 Rw7G036430 Rw7G039320 Rw7G039510 Rw7G039560 Rw7G041370 Rw7G042050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1002
Acc65I GGTACC 1 cut(s) 397
AccB1I GGYRCC 1 cut(s) 397
AciI CCGC 2 cut(s) 185, 350
AclI AACGTT 1 cut(s) 7
AcoI YGGCCR 6 cut(s) 36, 162, 186, 911, 993, 1025
AcsI RAATTY 3 cut(s) 938, 966, 1175
AcyI GRCGYC 1 cut(s) 999
AfaI GTAC 3 cut(s) 399, 545, 725
AfiI CCNNNNNNNGG 1 cut(s) 1034
AflII CTTAAG 1 cut(s) 365
AflIII ACRYGT 1 cut(s) 1087
AgsI TTSAA 4 cut(s) 50, 424, 938, 983
AjnI CCWGG 1 cut(s) 38
AleI CACNNNNGTG 1 cut(s) 530
AluBI AGCT 1 cut(s) 951
AluI AGCT 1 cut(s) 951
Alw21I GWGCWC 3 cut(s) 264, 345, 859
Alw26I GTCTC 1 cut(s) 658
Alw44I GTGCAC 2 cut(s) 260, 855
Ama87I CYCGRG 1 cut(s) 283
ApaLI GTGCAC 2 cut(s) 260, 855
ApeKI GCWGC 1 cut(s) 951
ApoI RAATTY 3 cut(s) 938, 966, 1175
Asp718I GGTACC 1 cut(s) 397
AspLEI GCGC 2 cut(s) 290, 472
AspS9I GGNCC 1 cut(s) 1041
AsuC2I CCSGG 2 cut(s) 284, 285
AsuHPI GGTGA 1 cut(s) 517
AsuII TTCGAA 3 cut(s) 31, 115, 892
AvaI CYCGRG 1 cut(s) 283
BaeGI GKGCMC 2 cut(s) 264, 859
BanI GGYRCC 1 cut(s) 397
BarI GAAGNNNNNNTAC 2 cut(s) 707, 739
BauI CACGAG 1 cut(s) 839
BbsI GAAGAC 1 cut(s) 722
Bbv12I GWGCWC 3 cut(s) 264, 345, 859
BbvI GCAGC 1 cut(s) 938
BccI CCATC 3 cut(s) 173, 1014, 1081
BceAI ACGGC 3 cut(s) 51, 1012, 1242
BciT130I CCWGG 1 cut(s) 40
BciVI GTATCC 2 cut(s) 221, 1203
BclI TGATCA 1 cut(s) 1170
BcnI CCSGG 2 cut(s) 284, 285
BcoDI GTCTC 1 cut(s) 658
BfaI CTAG 2 cut(s) 467, 1158
BfmI CTRYAG 1 cut(s) 604
BfrI CTTAAG 1 cut(s) 365
BfuI GTATCC 2 cut(s) 221, 1203
BisI GCNGC 3 cut(s) 186, 351, 952
BlsI GCNGC 3 cut(s) 187, 352, 953
Bme1390I CCNGG 3 cut(s) 40, 284, 285
BmeT110I CYCGRG 1 cut(s) 283
BmgT120I GGNCC 1 cut(s) 1041
BmiI GGNNCC 1 cut(s) 399
BmrFI CCNGG 3 cut(s) 40, 284, 285
BmrI ACTGGG 1 cut(s) 398
BmsI GCATC 3 cut(s) 84, 269, 449
BmuI ACTGGG 1 cut(s) 398
BpiI GAAGAC 1 cut(s) 722
Bpu14I TTCGAA 3 cut(s) 31, 115, 892
BpuEI CTTGAG 2 cut(s) 532, 681
BpuMI CCSGG 2 cut(s) 284, 285
BsaAI YACGTR 1 cut(s) 1090
BsaHI GRCGYC 1 cut(s) 999
BsaJI CCNNGG 6 cut(s) 138, 159, 283, 615, 1022, 1044
Bsc4I CCNNNNNNNGG 1 cut(s) 1034
Bse1I ACTGG 2 cut(s) 404, 914
BseBI CCWGG 1 cut(s) 40
BseDI CCNNGG 6 cut(s) 138, 159, 283, 615, 1022, 1044
BseGI GGATG 4 cut(s) 148, 184, 621, 1006
BseLI CCNNNNNNNGG 1 cut(s) 1034
BseNI ACTGG 2 cut(s) 404, 914
BseSI GKGCMC 2 cut(s) 264, 859
BseX3I CGGCCG 1 cut(s) 993
BseXI GCAGC 1 cut(s) 938
Bsh1285I CGRYCG 1 cut(s) 996
BshNI GGYRCC 1 cut(s) 397
BsiEI CGRYCG 1 cut(s) 996
BsiHKAI GWGCWC 3 cut(s) 264, 345, 859
BsiHKCI CYCGRG 1 cut(s) 283
BsiSI CCGG 3 cut(s) 284, 867, 992
BslI CCNNNNNNNGG 1 cut(s) 1034
BsmAI GTCTC 1 cut(s) 658
BsmI GAATGC 1 cut(s) 353
BsoBI CYCGRG 1 cut(s) 283
Bsp119I TTCGAA 3 cut(s) 31, 115, 892
Bsp1286I GDGCHC 3 cut(s) 264, 345, 859
Bsp143I GATC 3 cut(s) 709, 781, 1170
Bsp19I CCATGG 3 cut(s) 159, 1022, 1044
BspACI CCGC 2 cut(s) 185, 350
BspHI TCATGA 2 cut(s) 706, 825
BspLI GGNNCC 1 cut(s) 399
BspT104I TTCGAA 3 cut(s) 31, 115, 892
BspT107I GGYRCC 1 cut(s) 397
BspTI CTTAAG 1 cut(s) 365
BsrI ACTGG 2 cut(s) 404, 914
BssECI CCNNGG 6 cut(s) 138, 159, 283, 615, 1022, 1044
BssMI GATC 3 cut(s) 709, 781, 1170
BssNI GRCGYC 1 cut(s) 999
BssSI CACGAG 1 cut(s) 839
BssT1I CCWWGG 4 cut(s) 138, 159, 1022, 1044
Bst2BI CACGAG 1 cut(s) 839
Bst2UI CCWGG 1 cut(s) 40
Bst4CI ACNGT 2 cut(s) 271, 1168
BstACI GRCGYC 1 cut(s) 999
BstAFI CTTAAG 1 cut(s) 365
BstBAI YACGTR 1 cut(s) 1090
BstBI TTCGAA 3 cut(s) 31, 115, 892
BstDEI CTNAG 1 cut(s) 127
BstDSI CCRYGG 3 cut(s) 159, 1022, 1044
BstEII GGTNACC 1 cut(s) 609
BstF5I GGATG 4 cut(s) 148, 184, 621, 1006
BstHHI GCGC 2 cut(s) 290, 472
BstKTI GATC 3 cut(s) 712, 784, 1173
BstMAI GTCTC 1 cut(s) 658
BstMBI GATC 3 cut(s) 709, 781, 1170
BstMCI CGRYCG 1 cut(s) 996
BstMWI GCNNNNNNNGC 2 cut(s) 415, 863
BstNI CCWGG 1 cut(s) 40
BstNSI RCATGY 1 cut(s) 224
BstPI GGTNACC 1 cut(s) 609
BstSCI CCNGG 3 cut(s) 38, 282, 283
BstSFI CTRYAG 1 cut(s) 604
BstSLI GKGCMC 2 cut(s) 264, 859
BstV1I GCAGC 1 cut(s) 938
BstV2I GAAGAC 1 cut(s) 722
BstXI CCANNNNNNTGG 1 cut(s) 660
BstZI CGGCCG 1 cut(s) 993
BsuI GTATCC 2 cut(s) 221, 1203
BtgI CCRYGG 3 cut(s) 159, 1022, 1044
BtsCI GGATG 4 cut(s) 148, 184, 621, 1006
BtsIMutI CAGTG 3 cut(s) 411, 1107, 1173
CciI TCATGA 2 cut(s) 706, 825
CfoI GCGC 2 cut(s) 290, 472
Cfr13I GGNCC 1 cut(s) 1041
Cfr9I CCCGGG 1 cut(s) 283
Csp6I GTAC 3 cut(s) 398, 544, 724
CspCI CAANNNNNGTGG 2 cut(s) 375, 410
CviAII CATG 9 cut(s) 160, 194, 211, 221, 707, 826, 971, 1023, 1045
CviQI GTAC 3 cut(s) 398, 544, 724
DdeI CTNAG 1 cut(s) 127
DpnI GATC 3 cut(s) 711, 783, 1172
DpnII GATC 3 cut(s) 709, 781, 1170
EaeI YGGCCR 6 cut(s) 36, 162, 186, 911, 993, 1025
EagI CGGCCG 1 cut(s) 993
EclXI CGGCCG 1 cut(s) 993
Eco130I CCWWGG 4 cut(s) 138, 159, 1022, 1044
Eco147I AGGCCT 1 cut(s) 418
Eco52I CGGCCG 1 cut(s) 993
Eco88I CYCGRG 1 cut(s) 283
Eco91I GGTNACC 1 cut(s) 609
EcoO65I GGTNACC 1 cut(s) 609
EcoRII CCWGG 1 cut(s) 38
EcoT14I CCWWGG 4 cut(s) 138, 159, 1022, 1044
ErhI CCWWGG 4 cut(s) 138, 159, 1022, 1044
FaeI CATG 9 cut(s) 163, 197, 214, 224, 710, 829, 974, 1026, 1048
FalI AAGNNNNNCTT 2 cut(s) 359, 391
FatI CATG 9 cut(s) 159, 193, 210, 220, 706, 825, 970, 1022, 1044
FauNDI CATATG 1 cut(s) 101
FbaI TGATCA 1 cut(s) 1170
Fnu4HI GCNGC 3 cut(s) 186, 351, 952
FokI GGATG 4 cut(s) 155, 191, 608, 993
Fsp4HI GCNGC 3 cut(s) 186, 351, 952
FspBI CTAG 2 cut(s) 467, 1158
GlaI GCGC 2 cut(s) 289, 471
GluI GCNGC 3 cut(s) 186, 351, 952
HapII CCGG 3 cut(s) 284, 867, 992
HhaI GCGC 2 cut(s) 290, 472
Hin1I GRCGYC 1 cut(s) 999
Hin1II CATG 9 cut(s) 163, 197, 214, 224, 710, 829, 974, 1026, 1048
Hin6I GCGC 2 cut(s) 288, 470
HinP1I GCGC 2 cut(s) 288, 470
HinfI GANTC 4 cut(s) 519, 666, 718, 870
HpaII CCGG 3 cut(s) 284, 867, 992
HphI GGTGA 1 cut(s) 517
Hpy166II GTNNAC 4 cut(s) 262, 546, 838, 857
Hpy188I TCNGA 5 cut(s) 278, 445, 714, 778, 1164
Hpy188III TCNNGA 2 cut(s) 707, 826
Hpy8I GTNNAC 4 cut(s) 262, 546, 838, 857
Hpy99I CGWCG 1 cut(s) 1001
HpyCH4III ACNGT 2 cut(s) 271, 1168
HpyCH4IV ACGT 4 cut(s) 7, 999, 1089, 1146
HpyCH4V TGCA 8 cut(s) 262, 505, 572, 587, 857, 944, 954, 974
HpyF10VI GCNNNNNNNGC 2 cut(s) 415, 863
HpyF3I CTNAG 1 cut(s) 127
HpySE526I ACGT 4 cut(s) 7, 999, 1089, 1146
Hsp92I GRCGYC 1 cut(s) 999
Hsp92II CATG 9 cut(s) 163, 197, 214, 224, 710, 829, 974, 1026, 1048
HspAI GCGC 2 cut(s) 288, 470
KpnI GGTACC 1 cut(s) 401
Ksp22I TGATCA 1 cut(s) 1170
Kzo9I GATC 3 cut(s) 709, 781, 1170
Lsp1109I GCAGC 1 cut(s) 938
LweI GCATC 3 cut(s) 84, 269, 449
MaeI CTAG 2 cut(s) 467, 1158
MaeII ACGT 4 cut(s) 7, 999, 1089, 1146
MaeIII GTNAC 2 cut(s) 609, 1147
MalI GATC 3 cut(s) 711, 783, 1172
MboI GATC 3 cut(s) 709, 781, 1170
MboII GAAGA 3 cut(s) 329, 727, 1196
MfeI CAATTG 1 cut(s) 1011
MhlI GDGCHC 3 cut(s) 264, 345, 859
MluCI AATT 6 cut(s) 888, 918, 938, 966, 1011, 1175
MlyI GAGTC 2 cut(s) 660, 712
MmeI TCCRAC 1 cut(s) 205
MseI TTAA 4 cut(s) 14, 366, 887, 1017
MslI CAYNNNNRTG 2 cut(s) 304, 530
MspCI CTTAAG 1 cut(s) 365
MspI CCGG 3 cut(s) 284, 867, 992
MspR9I CCNGG 3 cut(s) 40, 284, 285
MunI CAATTG 1 cut(s) 1011
Mva1269I GAATGC 1 cut(s) 353
MvaI CCWGG 1 cut(s) 40
MwoI GCNNNNNNNGC 2 cut(s) 415, 863
NciI CCSGG 2 cut(s) 284, 285
NcoI CCATGG 3 cut(s) 159, 1022, 1044
NdeI CATATG 1 cut(s) 101
NdeII GATC 3 cut(s) 709, 781, 1170
NlaIII CATG 9 cut(s) 163, 197, 214, 224, 710, 829, 974, 1026, 1048
NlaIV GGNNCC 1 cut(s) 399
NmuCI GTSAC 1 cut(s) 1147
NspI RCATGY 1 cut(s) 224
NspV TTCGAA 3 cut(s) 31, 115, 892
OliI CACNNNNGTG 1 cut(s) 530
PagI TCATGA 2 cut(s) 706, 825
PceI AGGCCT 1 cut(s) 418
PctI GAATGC 1 cut(s) 353
PfeI GAWTC 2 cut(s) 519, 870
PkrI GCNGC 3 cut(s) 187, 352, 953
PleI GAGTC 2 cut(s) 660, 712
PpsI GAGTC 2 cut(s) 660, 712
Ppu21I YACGTR 1 cut(s) 1090
Psp1406I AACGTT 1 cut(s) 7
Psp6I CCWGG 1 cut(s) 38
PspEI GGTNACC 1 cut(s) 609
PspGI CCWGG 1 cut(s) 38
PspN4I GGNNCC 1 cut(s) 399
PspPI GGNCC 1 cut(s) 1041
RsaI GTAC 3 cut(s) 399, 545, 725
RsaNI GTAC 3 cut(s) 398, 544, 724
RseI CAYNNNNRTG 2 cut(s) 304, 530
SaqAI TTAA 4 cut(s) 14, 366, 887, 1017
SatI GCNGC 3 cut(s) 186, 351, 952
Sau3AI GATC 3 cut(s) 709, 781, 1170
Sau96I GGNCC 1 cut(s) 1041
SchI GAGTC 2 cut(s) 660, 712
ScrFI CCNGG 3 cut(s) 40, 284, 285
SduI GDGCHC 3 cut(s) 264, 345, 859
SfaNI GCATC 3 cut(s) 84, 269, 449
SfcI CTRYAG 1 cut(s) 604
SfuI TTCGAA 3 cut(s) 31, 115, 892
SmaI CCCGGG 1 cut(s) 285
SmiMI CAYNNNNRTG 2 cut(s) 304, 530
SmlI CTYRAG 3 cut(s) 365, 511, 696
SmoI CTYRAG 3 cut(s) 365, 511, 696
SrfI GCCCGGGC 1 cut(s) 285
Sse9I AATT 6 cut(s) 888, 918, 938, 966, 1011, 1175
SseBI AGGCCT 1 cut(s) 418
SsiI CCGC 2 cut(s) 185, 350
SspI AATATT 1 cut(s) 64
SspMI CTAG 2 cut(s) 467, 1158
StuI AGGCCT 1 cut(s) 418
StyD4I CCNGG 3 cut(s) 38, 282, 283
StyI CCWWGG 4 cut(s) 138, 159, 1022, 1044
TaaI ACNGT 2 cut(s) 271, 1168
TaiI ACGT 4 cut(s) 10, 1002, 1092, 1149
TaqI TCGA 7 cut(s) 31, 115, 357, 642, 648, 892, 1033
TaqII GACCGA 1 cut(s) 607
TasI AATT 6 cut(s) 888, 918, 938, 966, 1011, 1175
TauI GCSGC 2 cut(s) 188, 353
TfiI GAWTC 2 cut(s) 519, 870
Tru1I TTAA 4 cut(s) 14, 366, 887, 1017
Tru9I TTAA 4 cut(s) 14, 366, 887, 1017
TscAI CASTG 3 cut(s) 411, 1114, 1173
TseFI GTSAC 1 cut(s) 1147
TseI GCWGC 1 cut(s) 951
Tsp45I GTSAC 1 cut(s) 1147
TspDTI ATGAA 5 cut(s) 159, 199, 210, 959, 1236
TspMI CCCGGG 1 cut(s) 283
TspRI CASTG 3 cut(s) 411, 1114, 1173
Vha464I CTTAAG 1 cut(s) 365
VneI GTGCAC 2 cut(s) 260, 855
XapI RAATTY 3 cut(s) 938, 966, 1175
XceI RCATGY 1 cut(s) 224
XmaI CCCGGG 1 cut(s) 283
XspI CTAG 2 cut(s) 467, 1158
ZraI GACGTC 1 cut(s) 1000
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.