Rw7G039560

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000160
Physical Location & Seq
Forward (+)
60912620 .. 60914083
1464 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G039560.1

Sequence Viewer

Length: 1167 bp
ATGCGCATATATAGACTCAAGATGAACCCGGCCAAGTGTGTGTTTGGGGTTCAGGCAGGGGACTTTCTGGGATTTATAGTCCACCAGCGAGGAATTGAGGTCCCCGAAGACAAGGCAAGCGCAAATGAGTTTGTGTGGGAAACCAAACATCAAGAGGCTTTCGACAGTATCAAGGCCTATTTGGCAAACCCACCAGTCTTGGTTCCACCCAGAACCGGGATCCCGTTAAAGCTGTACATTTCAGCAGCTGACGCCTCCATTGGCAGCCTGCTCGCTCAGGACGATGAGGGCGGTGTCGAGCACGCCATATTTTATCTCAGCCGTAGACTGACTGACTGCGAGACAAGGTACACCCCTATGGAGAAGCTGTACCTAACCCTGTATTTTTCAGTGTGCAAGCTGCGACACTACATGTTATCCTTTACTACTTGCATCATCGCTCAGACCGATCTGGCTGTGAAAGGGCAGGCGATCGCGGATTTTCTAGCACACCATCCTCAGCTAGAAATACCTGTACTGAAGGAATTAGAGATTGCCTGCAACGCTACGACTCGACCAAATAAAGCGCACATCCCTGAGTACGAGGTCTGGTATCAAGCTACAATCTTTCTACAGCCCTGGGTATTATTTTTTGATGGCTCAAGAACGGATGCTCTGGCTGGCGTGGGGATTGTTTTGGAGAACCCGGCAGGTGATCGTTTCTCTTATTCTTTCCAGCTCATGTTCCAATGTACTAATAATCAGGCTGAGTATGAAGCTCTTATCATTGGACTCGAAGTCTTGCTGGAAATGGGCGTCCGAGACGTTCAGATTCGCGACGACTCTCAGCTTCACGCCATTGAGCTTCTGGACCAATTTACCCACGTTGATATGGAATATATACCACGCGAACGTAACTTTGCAGCTAATGAGCTCGCTCAGTTGGCTACAGGCATCACCTTGAAGTACGGAGTGCGCGAGCGCATTTTGAAAGTTGAGCGTCGCACACTACCTTCATGGCTTGCCCGACCTGATCCACCAGACGAGCCCGCGGTTGCGGTACTAGAGCCTATTGATACAGATTGGCGGATTCCACTGATTGAGTACCTCAAACAACCAGACCCCATAGCTGACAGGAGGGTTCGTTTCCTCGCCTTAAATTACTTCCTTCGAGGCGATGACTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

388

Amino Acids

44.25

Weight (kDa)

5.17

Isoelectric Point (pI)

32.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RT_RNaseH_2 PF17919 46 - 140 4.6e-21 RNase H-like domain found in reverse transcriptase
RT_RNaseH PF17917 75 - 150 9.3e-12 RNase H-like domain found in reverse transcriptase
RVT_3 PF13456 211 - 276 5.7e-07 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000160)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g11612 FvH4_2g25851 FvH4_3g22802 FvH4_3g22805 FvH4_3g31361 FvH4_3g31382 FvH4_4g05272 FvH4_4g05273 FvH4_4g14567 FvH4_4g15161 FvH4_5g22540 FvH4_6g13113 FvH4_6g31923 FvH4_6g31924 FvH4_6g33651 FvH4_6g45122 FvH4_7g03662
pyrus_communis pycom01g04240 pycom01g24010 pycom02g18210 pycom02g19420 pycom05g06510 pycom09g15750 pycom09g18940 pycom12g02580 pycom12g03100 pycom12g08310 pycom13g22710 pycom13g28060 pycom16g18340 pycom16g18350 pycom16g24880 pycom16g26240 pycom461g00260 pycom520g00980 pycom520g01320
rosa_chinensis RchiOBHm_Chr1g0320731 RchiOBHm_Chr2g0102771 RchiOBHm_Chr3g0462151 RchiOBHm_Chr5g0038141 RchiOBHm_Chr5g0069371 RchiOBHm_Chr7g0239101
rosa_multiflora Rmu_co8038252.1_g000001 Rmu_co8138412.1_g000001 Rmu_co8331087.1_g000001 Rmu_co8479311.1_g000001 Rmu_sc0000112.1_g000018 Rmu_sc0000346.1_g000012 Rmu_sc0002102.1_g000002 Rmu_sc0003505.1_g000013 Rmu_sc0004249.1_g000007 Rmu_sc0004448.1_g000010 Rmu_sc0004594.1_g000011 Rmu_sc0004915.1_g000010 Rmu_sc0008019.1_g000019 Rmu_sc0008303.1_g000001 Rmu_sc0008355.1_g000005 Rmu_sc0009253.1_g000018 Rmu_sc0010211.1_g000002 Rmu_sc0010252.1_g000009 Rmu_sc0011534.1_g000008 Rmu_sc0014811.1_g000009 Rmu_sc0019475.1_g000001 Rmu_sc0024897.1_g000001 Rmu_sc0024898.1_g000001 Rmu_sc0031791.1_g000001 Rmu_sc0038715.1_g000001
rosa_roxburghii Rroxscaffold_165G00436940 Rroxscaffold_174G00435270 Rroxscaffold_177G00434330 Rroxscaffold_177G00434340 Rroxscaffold_177G00434350 Rroxscaffold_1G00002160 Rroxscaffold_1G00025260 Rroxscaffold_1G00042950 Rroxscaffold_1G00068010 Rroxscaffold_2G00107530 Rroxscaffold_3G00221190 Rroxscaffold_3G00221520 Rroxscaffold_3G00223200 Rroxscaffold_4G00322230 Rroxscaffold_4G00331810 Rroxscaffold_5G00385150 Rroxscaffold_5G00387510 Rroxscaffold_6G00410520 Rroxscaffold_6G00423360 Rroxscaffold_6G00423370 Rroxscaffold_6G00429210 Rroxscaffold_7G00158300 Rroxscaffold_7G00163480 Rroxscaffold_7G00171410 Rroxscaffold_7G00178940 Rroxscaffold_7G00199480 Rroxscaffold_7G00205630 Rroxscaffold_7G00207440
rosa_rugosa Rorug01G0056400 Rorug04G0063900 Rorug05G0251400 Rorug07G0221900
rosa_samantha Rh1DG169400 Rh2AG292900 Rh2DG519200 Rh4DG260600 Rh5AG042600 Rh6BG117500
rosa_wichuraiana Rw0G001900 Rw0G005150 Rw0G006380 Rw0G015140 Rw0G016320 Rw0G019440 Rw0G019840 Rw0G023740 Rw1G001590 Rw1G002180 Rw1G003560 Rw1G004280 Rw1G006110 Rw1G006680 Rw1G007920 Rw1G008480 Rw1G009120 Rw1G010310 Rw1G014900 Rw1G019650 Rw1G022070 Rw1G022170 Rw1G041570 Rw2G002740 Rw2G005760 Rw2G032370 Rw2G046770 Rw2G050600 Rw2G051420 Rw3G015930 Rw3G016280 Rw3G019580 Rw3G028420 Rw4G003430 Rw4G005350 Rw4G007530 Rw4G008150 Rw4G009580 Rw4G010250 Rw4G015800 Rw4G017000 Rw4G017910 Rw4G018510 Rw4G019700 Rw4G031010 Rw5G012650 Rw5G020140 Rw5G022060 Rw5G034420 Rw5G035560 Rw5G043010 Rw5G046750 Rw5G047340 Rw5G049500 Rw6G001390 Rw6G002210 Rw6G004530 Rw6G004770 Rw6G005100 Rw6G005890 Rw6G011860 Rw6G014680 Rw6G019480 Rw6G028970 Rw6G033800 Rw7G013050 Rw7G014800 Rw7G025760 Rw7G025850 Rw7G026730 Rw7G026870 Rw7G036330 Rw7G036430 Rw7G039320 Rw7G039510 Rw7G039560 Rw7G041370 Rw7G042050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 680
Acc16I TGCGCA 1 cut(s) 5
Acc36I ACCTGC 1 cut(s) 680
AccI GTMKAC 1 cut(s) 325
AccII CGCG 5 cut(s) 476, 816, 888, 957, 1031
AciI CCGC 6 cut(s) 291, 476, 1029, 1031, 1037, 1066
AclWI GGATC 3 cut(s) 214, 227, 1007
AcoI YGGCCR 1 cut(s) 30
AcuI CTGAAG 1 cut(s) 539
AcyI GRCGYC 2 cut(s) 252, 795
AfaI GTAC 9 cut(s) 236, 350, 371, 516, 581, 733, 947, 1041, 1085
AfiI CCNNNNNNNGG 2 cut(s) 215, 216
AflIII ACRYGT 1 cut(s) 411
AgsI TTSAA 2 cut(s) 943, 970
AhdI GACNNNNNGTC 1 cut(s) 776
AjnI CCWGG 1 cut(s) 617
Alw21I GWGCWC 2 cut(s) 303, 915
Alw26I GTCTC 2 cut(s) 335, 795
AlwI GGATC 3 cut(s) 214, 227, 1007
AlwNI CAGNNNCTG 1 cut(s) 248
AoxI GGCC 2 cut(s) 30, 174
ApeKI GCWGC 4 cut(s) 245, 264, 400, 902
AsiSI GCGATCGC 1 cut(s) 474
AspLEI GCGC 5 cut(s) 6, 122, 568, 957, 963
AspS9I GGNCC 2 cut(s) 100, 850
AsuC2I CCSGG 3 cut(s) 29, 217, 686
AsuHPI GGTGA 2 cut(s) 704, 928
AvaII GGWCC 2 cut(s) 100, 850
BamHI GGATCC 1 cut(s) 219
BanII GRGCYC 2 cut(s) 915, 1029
BbsI GAAGAC 1 cut(s) 114
Bbv12I GWGCWC 2 cut(s) 303, 915
BbvCI CCTCAGC 1 cut(s) 498
BbvI GCAGC 4 cut(s) 257, 276, 387, 914
BccI CCATC 2 cut(s) 501, 629
BceAI ACGGC 1 cut(s) 306
BcgI CGANNNNNNTGC 2 cut(s) 253, 287
BciT130I CCWGG 1 cut(s) 619
BcnI CCSGG 3 cut(s) 29, 217, 686
BcoDI GTCTC 2 cut(s) 335, 795
BfaI CTAG 3 cut(s) 485, 503, 1043
BfmI CTRYAG 2 cut(s) 611, 927
BfuAI ACCTGC 1 cut(s) 680
BglI GCCNNNNNGGC 1 cut(s) 182
BisI GCNGC 4 cut(s) 246, 265, 401, 903
BlsI GCNGC 4 cut(s) 247, 266, 402, 904
Bme1390I CCNGG 4 cut(s) 29, 217, 619, 686
Bme18I GGWCC 2 cut(s) 100, 850
BmeRI GACNNNNNGTC 1 cut(s) 776
BmgT120I GGNCC 2 cut(s) 100, 850
BmiI GGNNCC 3 cut(s) 102, 204, 221
BmrFI CCNGG 4 cut(s) 29, 217, 619, 686
BmsI GCATC 3 cut(s) 441, 640, 942
BpiI GAAGAC 1 cut(s) 114
Bpu10I CCTNAGC 2 cut(s) 276, 498
BpuEI CTTGAG 1 cut(s) 625
BpuMI CCSGG 3 cut(s) 29, 217, 686
BsaHI GRCGYC 2 cut(s) 252, 795
BsaJI CCNNGG 3 cut(s) 617, 618, 1029
BsaXI ACNNNNNCTCC 4 cut(s) 353, 383, 1108, 1138
Bsc4I CCNNNNNNNGG 2 cut(s) 215, 216
Bse1I ACTGG 1 cut(s) 194
BseBI CCWGG 1 cut(s) 619
BseDI CCNNGG 3 cut(s) 617, 618, 1029
BseGI GGATG 3 cut(s) 493, 570, 655
BseLI CCNNNNNNNGG 2 cut(s) 215, 216
BseMII CTCAG 8 cut(s) 290, 331, 455, 512, 567, 738, 839, 932
BseNI ACTGG 1 cut(s) 194
BseXI GCAGC 4 cut(s) 257, 276, 387, 914
Bsh1236I CGCG 5 cut(s) 476, 816, 888, 957, 1031
Bsh1285I CGRYCG 1 cut(s) 474
BshFI GGCC 2 cut(s) 32, 176
BsiEI CGRYCG 1 cut(s) 474
BsiHKAI GWGCWC 2 cut(s) 303, 915
BsiSI CCGG 3 cut(s) 29, 216, 686
BslFI GGGAC 2 cut(s) 74, 86
BslI CCNNNNNNNGG 2 cut(s) 215, 216
BsmAI GTCTC 2 cut(s) 335, 795
BsmBI CGTCTC 1 cut(s) 795
BsmFI GGGAC 2 cut(s) 74, 86
BsnI GGCC 2 cut(s) 32, 176
Bsp1286I GDGCHC 3 cut(s) 303, 915, 1029
Bsp1407I TGTACA 1 cut(s) 234
Bsp143I GATC 5 cut(s) 219, 448, 471, 694, 1012
Bsp68I TCGCGA 1 cut(s) 816
BspACI CCGC 6 cut(s) 291, 476, 1029, 1031, 1037, 1066
BspANI GGCC 2 cut(s) 32, 176
BspCNI CTCAG 8 cut(s) 289, 330, 454, 511, 568, 739, 838, 931
BspFNI CGCG 5 cut(s) 476, 816, 888, 957, 1031
BspLI GGNNCC 3 cut(s) 102, 204, 221
BspMI ACCTGC 1 cut(s) 680
BspPI GGATC 3 cut(s) 214, 227, 1007
BsrGI TGTACA 1 cut(s) 234
BsrI ACTGG 1 cut(s) 194
BssECI CCNNGG 3 cut(s) 617, 618, 1029
BssMI GATC 5 cut(s) 219, 448, 471, 694, 1012
BssNI GRCGYC 2 cut(s) 252, 795
Bst2UI CCWGG 1 cut(s) 619
Bst4CI ACNGT 1 cut(s) 167
BstACI GRCGYC 2 cut(s) 252, 795
BstAUI TGTACA 1 cut(s) 234
BstDEI CTNAG 8 cut(s) 276, 317, 441, 498, 576, 747, 825, 918
BstDSI CCRYGG 1 cut(s) 1029
BstF5I GGATG 3 cut(s) 493, 570, 655
BstFNI CGCG 5 cut(s) 476, 816, 888, 957, 1031
BstHHI GCGC 5 cut(s) 6, 122, 568, 957, 963
BstKTI GATC 5 cut(s) 222, 451, 474, 697, 1015
BstMAI GTCTC 2 cut(s) 335, 795
BstMBI GATC 5 cut(s) 219, 448, 471, 694, 1012
BstMCI CGRYCG 1 cut(s) 474
BstMWI GCNNNNNNNGC 4 cut(s) 182, 251, 542, 923
BstNI CCWGG 1 cut(s) 619
BstNSI RCATGY 1 cut(s) 415
BstSCI CCNGG 4 cut(s) 27, 215, 617, 684
BstSFI CTRYAG 2 cut(s) 611, 927
BstUI CGCG 5 cut(s) 476, 816, 888, 957, 1031
BstV1I GCAGC 4 cut(s) 257, 276, 387, 914
BstV2I GAAGAC 1 cut(s) 114
BstX2I RGATCY 1 cut(s) 219
BstYI RGATCY 1 cut(s) 219
BsuRI GGCC 2 cut(s) 32, 176
BtgI CCRYGG 1 cut(s) 1029
BtgZI GCGATG 1 cut(s) 421
BtsCI GGATG 3 cut(s) 493, 570, 655
BtsIMutI CAGTG 2 cut(s) 396, 1073
BtuMI TCGCGA 1 cut(s) 816
BveI ACCTGC 1 cut(s) 680
CaiI CAGNNNCTG 1 cut(s) 248
CfoI GCGC 5 cut(s) 6, 122, 568, 957, 963
Cfr13I GGNCC 2 cut(s) 100, 850
Cfr42I CCGCGG 1 cut(s) 1032
CseI GACGC 3 cut(s) 260, 784, 968
Csp6I GTAC 9 cut(s) 235, 349, 370, 515, 580, 732, 946, 1040, 1084
CspCI CAANNNNNGTGG 2 cut(s) 180, 215
CviAII CATG 3 cut(s) 412, 721, 996
CviQI GTAC 9 cut(s) 235, 349, 370, 515, 580, 732, 946, 1040, 1084
DdeI CTNAG 8 cut(s) 276, 317, 441, 498, 576, 747, 825, 918
DpnI GATC 5 cut(s) 221, 450, 473, 696, 1014
DpnII GATC 5 cut(s) 219, 448, 471, 694, 1012
DriI GACNNNNNGTC 1 cut(s) 776
EaeI YGGCCR 1 cut(s) 30
Eam1105I GACNNNNNGTC 1 cut(s) 776
EciI GGCGGA 1 cut(s) 1081
Ecl136II GAGCTC 1 cut(s) 913
Eco147I AGGCCT 1 cut(s) 176
Eco24I GRGCYC 2 cut(s) 915, 1029
Eco47I GGWCC 2 cut(s) 100, 850
Eco53kI GAGCTC 1 cut(s) 913
Eco57I CTGAAG 1 cut(s) 539
EcoICRI GAGCTC 1 cut(s) 913
EcoO109I RGGNCCY 1 cut(s) 100
EcoRII CCWGG 1 cut(s) 617
EcoT38I GRGCYC 2 cut(s) 915, 1029
Esp3I CGTCTC 1 cut(s) 795
FaeI CATG 3 cut(s) 415, 724, 999
FaqI GGGAC 2 cut(s) 74, 86
FatI CATG 3 cut(s) 411, 720, 995
FauI CCCGC 1 cut(s) 1036
FblI GTMKAC 1 cut(s) 325
Fnu4HI GCNGC 4 cut(s) 246, 265, 401, 903
FokI GGATG 3 cut(s) 480, 557, 662
FriOI GRGCYC 2 cut(s) 915, 1029
Fsp4HI GCNGC 4 cut(s) 246, 265, 401, 903
FspAI RTGCGCAY 1 cut(s) 5
FspBI CTAG 3 cut(s) 485, 503, 1043
FspI TGCGCA 1 cut(s) 5
GlaI GCGC 5 cut(s) 5, 121, 567, 956, 962
GluI GCNGC 4 cut(s) 246, 265, 401, 903
HaeIII GGCC 2 cut(s) 32, 176
HapII CCGG 3 cut(s) 29, 216, 686
HgaI GACGC 3 cut(s) 260, 784, 968
HhaI GCGC 5 cut(s) 6, 122, 568, 957, 963
Hin1I GRCGYC 2 cut(s) 252, 795
Hin1II CATG 3 cut(s) 415, 724, 999
Hin6I GCGC 5 cut(s) 4, 120, 566, 955, 961
HinP1I GCGC 5 cut(s) 4, 120, 566, 955, 961
HinfI GANTC 6 cut(s) 15, 550, 771, 811, 821, 1069
HpaII CCGG 3 cut(s) 29, 216, 686
HphI GGTGA 2 cut(s) 704, 928
Hpy166II GTNNAC 3 cut(s) 82, 326, 351
Hpy188I TCNGA 3 cut(s) 444, 800, 810
Hpy188III TCNNGA 6 cut(s) 19, 152, 278, 642, 815, 848
Hpy8I GTNNAC 3 cut(s) 82, 326, 351
Hpy99I CGWCG 2 cut(s) 821, 984
HpyAV CCTTC 3 cut(s) 514, 1002, 1157
HpyCH4III ACNGT 1 cut(s) 167
HpyCH4IV ACGT 3 cut(s) 804, 864, 892
HpyCH4V TGCA 4 cut(s) 396, 432, 540, 902
HpyF10VI GCNNNNNNNGC 4 cut(s) 182, 251, 542, 923
HpyF3I CTNAG 8 cut(s) 276, 317, 441, 498, 576, 747, 825, 918
HpySE526I ACGT 3 cut(s) 804, 864, 892
Hsp92I GRCGYC 2 cut(s) 252, 795
Hsp92II CATG 3 cut(s) 415, 724, 999
HspAI GCGC 5 cut(s) 4, 120, 566, 955, 961
KspI CCGCGG 1 cut(s) 1032
Kzo9I GATC 5 cut(s) 219, 448, 471, 694, 1012
Lsp1109I GCAGC 4 cut(s) 257, 276, 387, 914
LweI GCATC 3 cut(s) 441, 640, 942
MaeI CTAG 3 cut(s) 485, 503, 1043
MaeII ACGT 3 cut(s) 804, 864, 892
MaeIII GTNAC 1 cut(s) 893
MalI GATC 5 cut(s) 221, 450, 473, 696, 1014
MboI GATC 5 cut(s) 219, 448, 471, 694, 1012
MboII GAAGA 1 cut(s) 119
MflI RGATCY 1 cut(s) 219
MhlI GDGCHC 3 cut(s) 303, 915, 1029
MluCI AATT 4 cut(s) 93, 524, 854, 1138
MlyI GAGTC 4 cut(s) 9, 544, 765, 815
MseI TTAA 2 cut(s) 227, 1136
MslI CAYNNNNRTG 1 cut(s) 356
MspA1I CMGCKG 2 cut(s) 248, 1031
MspI CCGG 3 cut(s) 29, 216, 686
MspR9I CCNGG 4 cut(s) 29, 217, 619, 686
MvaI CCWGG 1 cut(s) 619
MvnI CGCG 5 cut(s) 476, 816, 888, 957, 1031
MwoI GCNNNNNNNGC 4 cut(s) 182, 251, 542, 923
NciI CCSGG 3 cut(s) 29, 217, 686
NdeII GATC 5 cut(s) 219, 448, 471, 694, 1012
NlaIII CATG 3 cut(s) 415, 724, 999
NlaIV GGNNCC 3 cut(s) 102, 204, 221
NruI TCGCGA 1 cut(s) 816
NsbI TGCGCA 1 cut(s) 5
NspI RCATGY 1 cut(s) 415
PaqCI CACCTGC 1 cut(s) 680
PasI CCCWGGG 1 cut(s) 618
PceI AGGCCT 1 cut(s) 176
PciI ACATGT 1 cut(s) 411
PcsI WCGNNNNNNNCGW 3 cut(s) 279, 444, 954
PfeI GAWTC 2 cut(s) 811, 1069
PkrI GCNGC 4 cut(s) 247, 266, 402, 904
Ple19I CGATCG 1 cut(s) 474
PleI GAGTC 4 cut(s) 9, 544, 765, 815
PpsI GAGTC 4 cut(s) 9, 544, 765, 815
PpuMI RGGWCCY 1 cut(s) 100
PscI ACATGT 1 cut(s) 411
Psp124BI GAGCTC 1 cut(s) 915
Psp5II RGGWCCY 1 cut(s) 100
Psp6I CCWGG 1 cut(s) 617
PspGI CCWGG 1 cut(s) 617
PspN4I GGNNCC 3 cut(s) 102, 204, 221
PspPI GGNCC 2 cut(s) 100, 850
PspPPI RGGWCCY 1 cut(s) 100
PstNI CAGNNNCTG 1 cut(s) 248
PsuI RGATCY 1 cut(s) 219
PvuI CGATCG 1 cut(s) 474
PvuII CAGCTG 1 cut(s) 248
RgaI GCGATCGC 1 cut(s) 474
RruI TCGCGA 1 cut(s) 816
RsaI GTAC 9 cut(s) 236, 350, 371, 516, 581, 733, 947, 1041, 1085
RsaNI GTAC 9 cut(s) 235, 349, 370, 515, 580, 732, 946, 1040, 1084
RseI CAYNNNNRTG 1 cut(s) 356
SacI GAGCTC 1 cut(s) 915
SacII CCGCGG 1 cut(s) 1032
SaqAI TTAA 2 cut(s) 227, 1136
SatI GCNGC 4 cut(s) 246, 265, 401, 903
Sau3AI GATC 5 cut(s) 219, 448, 471, 694, 1012
Sau96I GGNCC 2 cut(s) 100, 850
SchI GAGTC 4 cut(s) 9, 544, 765, 815
ScrFI CCNGG 4 cut(s) 29, 217, 619, 686
SduI GDGCHC 3 cut(s) 303, 915, 1029
SfaAI GCGATCGC 1 cut(s) 474
SfaNI GCATC 3 cut(s) 441, 640, 942
SfcI CTRYAG 2 cut(s) 611, 927
Sfr303I CCGCGG 1 cut(s) 1032
SgfI GCGATCGC 1 cut(s) 474
SgrBI CCGCGG 1 cut(s) 1032
SinI GGWCC 2 cut(s) 100, 850
SmiMI CAYNNNNRTG 1 cut(s) 356
SmlI CTYRAG 2 cut(s) 17, 640
SmoI CTYRAG 2 cut(s) 17, 640
Sse9I AATT 4 cut(s) 93, 524, 854, 1138
SseBI AGGCCT 1 cut(s) 176
SsiI CCGC 6 cut(s) 291, 476, 1029, 1031, 1037, 1066
SspMI CTAG 3 cut(s) 485, 503, 1043
SstI GAGCTC 1 cut(s) 915
StuI AGGCCT 1 cut(s) 176
StyD4I CCNGG 4 cut(s) 27, 215, 617, 684
TaaI ACNGT 1 cut(s) 167
TaiI ACGT 3 cut(s) 807, 867, 895
TaqI TCGA 5 cut(s) 162, 297, 553, 774, 1150
TaqII GACCGA 1 cut(s) 461
TasI AATT 4 cut(s) 93, 524, 854, 1138
TatI WGTACW 3 cut(s) 234, 514, 731
TfiI GAWTC 2 cut(s) 811, 1069
Tru1I TTAA 2 cut(s) 227, 1136
Tru9I TTAA 2 cut(s) 227, 1136
TscAI CASTG 2 cut(s) 396, 1080
TseI GCWGC 4 cut(s) 245, 264, 400, 902
TspDTI ATGAA 3 cut(s) 38, 768, 984
TspGWI ACGGA 2 cut(s) 662, 963
TspRI CASTG 2 cut(s) 396, 1080
VpaK11BI GGWCC 2 cut(s) 100, 850
XceI RCATGY 1 cut(s) 415
XcmI CCANNNNNNNNNTGG 1 cut(s) 844
XmiI GTMKAC 1 cut(s) 325
XspI CTAG 3 cut(s) 485, 503, 1043
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.