Rw5G020140

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000160
Physical Location & Seq
Reverse (-)
26401087 .. 26402607
1521 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G020140.1

Sequence Viewer

Length: 1188 bp
ATGCGACGACATAGACTCAAGATGAACCCTGCCAAATGCGTGTTTGGGGTCCAGGCAGGAGACTTTCTGGGGTTCATTGTTCATCAGCGAGGAATTGAGGTCCCCGAAGACAAGGCCAGCGCAAATGAGTTTGTGTGGGAGCCTAAACATCAAGAGGCTTTCGACAATATCAAGGCCTACTTGGCGAGCCCACCAGTCCTGGTTCCACCCAGAGCCGGGATCCCATTAAAGCTGTACATTTCAGCAGCCGAGGCCTCCATTGGCAGCTTGCTCGCTCAGGACGATGAGGGAGGTGTCGAGCATGCTATATGTTACCTCAGCCGCACATTGACAGACTGCGAGACAAGGTACACCCCTATGGAGAAGCTGTGCCTAACTCTGTATTTTTCAGCGTGCAAGTTGCGACACTATATGTTATCCTTTACCACTTGCATCATCGCTCAAACCGACTTGAAAGCTGTCAAGGGGCAAGCCATCGAAGACTTTCTCGCACATCATCCTACGTTAGAGATACCCGCACTGAAGGAGTTAGAGATAGCGTCCACCACTACGACTCGACCAGATTTGGCGTGCATCCCTGAGTATGGGGTTTGGTACCAAGCCACAATCTCACTGCAGCCTTGGATATTGTTCTTTGATGGCTCAAGAACTGACACACTGGCTGGTGCAGAGATTGTTTTGGAAAACCCAGCTGGTGACCGCTTCTCTTATTCCTTCCAACTAGAGTTCAAATGCACAAATAATCAGGCTGAATATGAAGCTCTTATTATTGGACTCAAGGTTTTATTGGAAATGGGCGTACGGGACCTTCTGGACCAATATAACGATGTCGGTCTGGAGCATATACCACGCGAGCATAAGTTTGCAGCTAATGAGCTCGCTCAGCTGGCCACCGGCATCACATTGAAGTATGGAGTGCGCGAGTGCATTTTGAAAGTTGAGCGTCGCACATTACCTTCATGGCTAGCACGACCTGATCCACCAGATGATCCTGTGGTCGTGGTGCTAGAACCTATTGATGTAGATTGGCGAATCCCGCTGATTGAGTACCTCAAACAAGCAGACCCCGGAGTTGACAGGAAGATTCTTTTCCTCGCACTAAACTACTTCCTTAGGGGTGATGAGTTGCGGCGACGTGGGGAGGATGGTATAGACTTTCAGTGCGTCTATGGCCGCGAAGCTAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

395

Amino Acids

44.62

Weight (kDa)

5.27

Isoelectric Point (pI)

36.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RT_RNaseH_2 PF17919 46 - 140 2e-21 RNase H-like domain found in reverse transcriptase
RT_RNaseH PF17917 75 - 155 2.7e-13 RNase H-like domain found in reverse transcriptase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000160)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g11612 FvH4_2g25851 FvH4_3g22802 FvH4_3g22805 FvH4_3g31361 FvH4_3g31382 FvH4_4g05272 FvH4_4g05273 FvH4_4g14567 FvH4_4g15161 FvH4_5g22540 FvH4_6g13113 FvH4_6g31923 FvH4_6g31924 FvH4_6g33651 FvH4_6g45122 FvH4_7g03662
pyrus_communis pycom01g04240 pycom01g24010 pycom02g18210 pycom02g19420 pycom05g06510 pycom09g15750 pycom09g18940 pycom12g02580 pycom12g03100 pycom12g08310 pycom13g22710 pycom13g28060 pycom16g18340 pycom16g18350 pycom16g24880 pycom16g26240 pycom461g00260 pycom520g00980 pycom520g01320
rosa_chinensis RchiOBHm_Chr1g0320731 RchiOBHm_Chr2g0102771 RchiOBHm_Chr3g0462151 RchiOBHm_Chr5g0038141 RchiOBHm_Chr5g0069371 RchiOBHm_Chr7g0239101
rosa_multiflora Rmu_co8038252.1_g000001 Rmu_co8138412.1_g000001 Rmu_co8331087.1_g000001 Rmu_co8479311.1_g000001 Rmu_sc0000112.1_g000018 Rmu_sc0000346.1_g000012 Rmu_sc0002102.1_g000002 Rmu_sc0003505.1_g000013 Rmu_sc0004249.1_g000007 Rmu_sc0004448.1_g000010 Rmu_sc0004594.1_g000011 Rmu_sc0004915.1_g000010 Rmu_sc0008019.1_g000019 Rmu_sc0008303.1_g000001 Rmu_sc0008355.1_g000005 Rmu_sc0009253.1_g000018 Rmu_sc0010211.1_g000002 Rmu_sc0010252.1_g000009 Rmu_sc0011534.1_g000008 Rmu_sc0014811.1_g000009 Rmu_sc0019475.1_g000001 Rmu_sc0024897.1_g000001 Rmu_sc0024898.1_g000001 Rmu_sc0031791.1_g000001 Rmu_sc0038715.1_g000001
rosa_roxburghii Rroxscaffold_165G00436940 Rroxscaffold_174G00435270 Rroxscaffold_177G00434330 Rroxscaffold_177G00434340 Rroxscaffold_177G00434350 Rroxscaffold_1G00002160 Rroxscaffold_1G00025260 Rroxscaffold_1G00042950 Rroxscaffold_1G00068010 Rroxscaffold_2G00107530 Rroxscaffold_3G00221190 Rroxscaffold_3G00221520 Rroxscaffold_3G00223200 Rroxscaffold_4G00322230 Rroxscaffold_4G00331810 Rroxscaffold_5G00385150 Rroxscaffold_5G00387510 Rroxscaffold_6G00410520 Rroxscaffold_6G00423360 Rroxscaffold_6G00423370 Rroxscaffold_6G00429210 Rroxscaffold_7G00158300 Rroxscaffold_7G00163480 Rroxscaffold_7G00171410 Rroxscaffold_7G00178940 Rroxscaffold_7G00199480 Rroxscaffold_7G00205630 Rroxscaffold_7G00207440
rosa_rugosa Rorug01G0056400 Rorug04G0063900 Rorug05G0251400 Rorug07G0221900
rosa_samantha Rh1DG169400 Rh2AG292900 Rh2DG519200 Rh4DG260600 Rh5AG042600 Rh6BG117500
rosa_wichuraiana Rw0G001900 Rw0G005150 Rw0G006380 Rw0G015140 Rw0G016320 Rw0G019440 Rw0G019840 Rw0G023740 Rw1G001590 Rw1G002180 Rw1G003560 Rw1G004280 Rw1G006110 Rw1G006680 Rw1G007920 Rw1G008480 Rw1G009120 Rw1G010310 Rw1G014900 Rw1G019650 Rw1G022070 Rw1G022170 Rw1G041570 Rw2G002740 Rw2G005760 Rw2G032370 Rw2G046770 Rw2G050600 Rw2G051420 Rw3G015930 Rw3G016280 Rw3G019580 Rw3G028420 Rw4G003430 Rw4G005350 Rw4G007530 Rw4G008150 Rw4G009580 Rw4G010250 Rw4G015800 Rw4G017000 Rw4G017910 Rw4G018510 Rw4G019700 Rw4G031010 Rw5G012650 Rw5G020140 Rw5G022060 Rw5G034420 Rw5G035560 Rw5G043010 Rw5G046750 Rw5G047340 Rw5G049500 Rw6G001390 Rw6G002210 Rw6G004530 Rw6G004770 Rw6G005100 Rw6G005890 Rw6G011860 Rw6G014680 Rw6G019480 Rw6G028970 Rw6G033800 Rw7G013050 Rw7G014800 Rw7G025760 Rw7G025850 Rw7G026730 Rw7G026870 Rw7G036330 Rw7G036430 Rw7G039320 Rw7G039510 Rw7G039560 Rw7G041370 Rw7G042050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 594
AccB1I GGYRCC 1 cut(s) 594
AccII CGCG 3 cut(s) 852, 921, 1176
AciI CCGC 6 cut(s) 322, 516, 700, 1037, 1129, 1174
AclWI GGATC 4 cut(s) 214, 227, 971, 983
AcoI YGGCCR 2 cut(s) 888, 1171
AcuI CTGAAG 1 cut(s) 542
AfaI GTAC 5 cut(s) 236, 350, 596, 801, 1049
AfiI CCNNNNNNNGG 3 cut(s) 215, 216, 584
AgsI TTSAA 4 cut(s) 454, 730, 907, 934
AjiI CACGTC 1 cut(s) 1136
AjnI CCWGG 2 cut(s) 51, 198
Alw21I GWGCWC 1 cut(s) 879
Alw26I GTCTC 2 cut(s) 54, 335
AlwI GGATC 4 cut(s) 214, 227, 971, 983
AoxI GGCC 5 cut(s) 114, 174, 252, 888, 1171
ApeKI GCWGC 4 cut(s) 245, 264, 616, 866
Asp700I GAANNNNTTC 1 cut(s) 483
Asp718I GGTACC 1 cut(s) 594
AspLEI GCGC 2 cut(s) 122, 921
AspS9I GGNCC 4 cut(s) 49, 100, 805, 814
AsuC2I CCSGG 2 cut(s) 217, 1068
AsuHPI GGTGA 2 cut(s) 707, 1130
AsuNHI GCTAGC 1 cut(s) 964
AvaII GGWCC 4 cut(s) 49, 100, 805, 814
AxyI CCTNAGG 1 cut(s) 1112
BalI TGGCCA 1 cut(s) 890
BamHI GGATCC 1 cut(s) 219
BanI GGYRCC 1 cut(s) 594
BanII GRGCYC 2 cut(s) 191, 879
BarI GAAGNNNNNNTAC 2 cut(s) 792, 824
BbsI GAAGAC 2 cut(s) 114, 486
Bbv12I GWGCWC 1 cut(s) 879
BbvCI CCTCAGC 1 cut(s) 317
BbvI GCAGC 4 cut(s) 257, 276, 628, 878
BccI CCATC 3 cut(s) 482, 632, 1139
BcgI CGANNNNNNTGC 2 cut(s) 253, 287
BciT130I CCWGG 2 cut(s) 53, 200
BcnI CCSGG 2 cut(s) 217, 1068
BcoDI GTCTC 2 cut(s) 54, 335
BfaI CTAG 3 cut(s) 722, 965, 1007
BfmI CTRYAG 1 cut(s) 614
BglI GCCNNNNNGGC 1 cut(s) 182
BisI GCNGC 7 cut(s) 246, 265, 322, 617, 867, 1130, 1174
BlpI GCTNAGC 1 cut(s) 882
BlsI GCNGC 7 cut(s) 247, 266, 323, 618, 868, 1131, 1175
Bme1390I CCNGG 4 cut(s) 53, 200, 217, 1068
Bme18I GGWCC 4 cut(s) 49, 100, 805, 814
BmgBI CACGTC 1 cut(s) 1136
BmgT120I GGNCC 4 cut(s) 49, 100, 805, 814
BmiI GGNNCC 7 cut(s) 50, 102, 141, 204, 221, 596, 806
BmrFI CCNGG 4 cut(s) 53, 200, 217, 1068
BmsI GCATC 3 cut(s) 441, 582, 906
BmtI GCTAGC 1 cut(s) 968
BpiI GAAGAC 2 cut(s) 114, 486
BpmI CTGGAG 1 cut(s) 857
Bpu10I CCTNAGC 2 cut(s) 276, 317
Bpu1102I GCTNAGC 1 cut(s) 882
BpuEI CTTGAG 2 cut(s) 628, 761
BpuMI CCSGG 2 cut(s) 217, 1068
BsaJI CCNNGG 3 cut(s) 249, 620, 1066
BsaXI ACNNNNNCTCC 2 cut(s) 353, 383
Bsc4I CCNNNNNNNGG 3 cut(s) 215, 216, 584
Bse118I RCCGGY 1 cut(s) 893
Bse1I ACTGG 2 cut(s) 194, 663
Bse21I CCTNAGG 1 cut(s) 1112
BseBI CCWGG 2 cut(s) 53, 200
BseDI CCNNGG 3 cut(s) 249, 620, 1066
BseGI GGATG 3 cut(s) 496, 573, 1150
BseLI CCNNNNNNNGG 3 cut(s) 215, 216, 584
BseMII CTCAG 4 cut(s) 290, 331, 570, 896
BseNI ACTGG 2 cut(s) 194, 663
BseXI GCAGC 4 cut(s) 257, 276, 628, 878
BseYI CCCAGC 1 cut(s) 688
BsgI GTGCAG 1 cut(s) 687
Bsh1236I CGCG 3 cut(s) 852, 921, 1176
BshFI GGCC 5 cut(s) 116, 176, 254, 890, 1173
BshNI GGYRCC 1 cut(s) 594
BsiHKAI GWGCWC 1 cut(s) 879
BsiSI CCGG 3 cut(s) 216, 894, 1068
BsiWI CGTACG 1 cut(s) 799
BslFI GGGAC 2 cut(s) 86, 818
BslI CCNNNNNNNGG 3 cut(s) 215, 216, 584
BsmAI GTCTC 2 cut(s) 54, 335
BsmFI GGGAC 2 cut(s) 86, 818
BsnI GGCC 5 cut(s) 116, 176, 254, 890, 1173
Bsp1286I GDGCHC 2 cut(s) 191, 879
Bsp1407I TGTACA 1 cut(s) 234
Bsp143I GATC 3 cut(s) 219, 976, 988
Bsp1720I GCTNAGC 1 cut(s) 882
BspACI CCGC 6 cut(s) 322, 516, 700, 1037, 1129, 1174
BspANI GGCC 5 cut(s) 116, 176, 254, 890, 1173
BspCNI CTCAG 4 cut(s) 289, 330, 571, 895
BspFNI CGCG 3 cut(s) 852, 921, 1176
BspLI GGNNCC 7 cut(s) 50, 102, 141, 204, 221, 596, 806
BspMAI CTGCAG 1 cut(s) 618
BspOI GCTAGC 1 cut(s) 968
BspPI GGATC 4 cut(s) 214, 227, 971, 983
BspT107I GGYRCC 1 cut(s) 594
BsrFI RCCGGY 1 cut(s) 893
BsrGI TGTACA 1 cut(s) 234
BsrI ACTGG 2 cut(s) 194, 663
BssAI RCCGGY 1 cut(s) 893
BssECI CCNNGG 3 cut(s) 249, 620, 1066
BssMI GATC 3 cut(s) 219, 976, 988
BssT1I CCWWGG 1 cut(s) 620
Bst2UI CCWGG 2 cut(s) 53, 200
BstAUI TGTACA 1 cut(s) 234
BstDEI CTNAG 5 cut(s) 276, 317, 579, 882, 1112
BstEII GGTNACC 1 cut(s) 695
BstF5I GGATG 3 cut(s) 496, 573, 1150
BstFNI CGCG 3 cut(s) 852, 921, 1176
BstHHI GCGC 2 cut(s) 122, 921
BstKTI GATC 3 cut(s) 222, 979, 991
BstMAI GTCTC 2 cut(s) 54, 335
BstMBI GATC 3 cut(s) 219, 976, 988
BstMWI GCNNNNNNNGC 6 cut(s) 182, 251, 883, 887, 1036, 1170
BstNI CCWGG 2 cut(s) 53, 200
BstNSI RCATGY 1 cut(s) 305
BstPI GGTNACC 1 cut(s) 695
BstSCI CCNGG 4 cut(s) 51, 198, 215, 1066
BstSFI CTRYAG 1 cut(s) 614
BstUI CGCG 3 cut(s) 852, 921, 1176
BstV1I GCAGC 4 cut(s) 257, 276, 628, 878
BstV2I GAAGAC 2 cut(s) 114, 486
BstX2I RGATCY 1 cut(s) 219
BstYI RGATCY 1 cut(s) 219
Bsu36I CCTNAGG 1 cut(s) 1112
BsuRI GGCC 5 cut(s) 116, 176, 254, 890, 1173
BtgZI GCGATG 1 cut(s) 421
BtrI CACGTC 1 cut(s) 1136
BtsCI GGATG 3 cut(s) 496, 573, 1150
BtsI GCAGTG 1 cut(s) 611
BtsIMutI CAGTG 4 cut(s) 518, 611, 656, 1166
CfoI GCGC 2 cut(s) 122, 921
Cfr10I RCCGGY 1 cut(s) 893
Cfr13I GGNCC 4 cut(s) 49, 100, 805, 814
CseI GACGC 3 cut(s) 528, 932, 1153
Csp6I GTAC 5 cut(s) 235, 349, 595, 800, 1048
CviAII CATG 2 cut(s) 302, 960
CviQI GTAC 5 cut(s) 235, 349, 595, 800, 1048
DdeI CTNAG 5 cut(s) 276, 317, 579, 882, 1112
DpnI GATC 3 cut(s) 221, 978, 990
DpnII GATC 3 cut(s) 219, 976, 988
EaeI YGGCCR 2 cut(s) 888, 1171
Ecl136II GAGCTC 1 cut(s) 877
Eco130I CCWWGG 1 cut(s) 620
Eco147I AGGCCT 2 cut(s) 176, 254
Eco24I GRGCYC 2 cut(s) 191, 879
Eco47I GGWCC 4 cut(s) 49, 100, 805, 814
Eco53kI GAGCTC 1 cut(s) 877
Eco57I CTGAAG 1 cut(s) 542
Eco81I CCTNAGG 1 cut(s) 1112
Eco91I GGTNACC 1 cut(s) 695
EcoICRI GAGCTC 1 cut(s) 877
EcoO109I RGGNCCY 2 cut(s) 100, 805
EcoO65I GGTNACC 1 cut(s) 695
EcoRII CCWGG 2 cut(s) 51, 198
EcoT14I CCWWGG 1 cut(s) 620
EcoT38I GRGCYC 2 cut(s) 191, 879
ErhI CCWWGG 1 cut(s) 620
FaeI CATG 2 cut(s) 305, 963
FalI AAGNNNNNCTT 2 cut(s) 164, 196
FaqI GGGAC 2 cut(s) 86, 818
FatI CATG 2 cut(s) 301, 959
FauI CCCGC 2 cut(s) 523, 1044
Fnu4HI GCNGC 7 cut(s) 246, 265, 322, 617, 867, 1130, 1174
FokI GGATG 3 cut(s) 483, 560, 1157
FriOI GRGCYC 2 cut(s) 191, 879
Fsp4HI GCNGC 7 cut(s) 246, 265, 322, 617, 867, 1130, 1174
FspBI CTAG 3 cut(s) 722, 965, 1007
GlaI GCGC 2 cut(s) 121, 920
GluI GCNGC 7 cut(s) 246, 265, 322, 617, 867, 1130, 1174
GsaI CCCAGC 1 cut(s) 692
GsuI CTGGAG 1 cut(s) 857
HaeIII GGCC 5 cut(s) 116, 176, 254, 890, 1173
HapII CCGG 3 cut(s) 216, 894, 1068
HgaI GACGC 3 cut(s) 528, 932, 1153
HhaI GCGC 2 cut(s) 122, 921
Hin1II CATG 2 cut(s) 305, 963
Hin6I GCGC 2 cut(s) 120, 919
HinP1I GCGC 2 cut(s) 120, 919
HincII GTYRAC 1 cut(s) 1075
HindII GTYRAC 1 cut(s) 1075
HinfI GANTC 5 cut(s) 15, 553, 774, 1032, 1084
HpaII CCGG 3 cut(s) 216, 894, 1068
HphI GGTGA 2 cut(s) 707, 1130
Hpy166II GTNNAC 3 cut(s) 351, 543, 1075
Hpy188III TCNNGA 6 cut(s) 19, 152, 278, 645, 812, 836
Hpy8I GTNNAC 3 cut(s) 351, 543, 1075
Hpy99I CGWCG 3 cut(s) 9, 948, 1137
HpyAV CCTTC 4 cut(s) 517, 724, 818, 966
HpyCH4IV ACGT 2 cut(s) 503, 1135
HpyCH4V TGCA 8 cut(s) 396, 432, 573, 616, 668, 735, 866, 927
HpyF10VI GCNNNNNNNGC 6 cut(s) 182, 251, 883, 887, 1036, 1170
HpyF3I CTNAG 5 cut(s) 276, 317, 579, 882, 1112
HpySE526I ACGT 2 cut(s) 503, 1135
Hsp92II CATG 2 cut(s) 305, 963
HspAI GCGC 2 cut(s) 120, 919
KpnI GGTACC 1 cut(s) 598
Kzo9I GATC 3 cut(s) 219, 976, 988
LmnI GCTCC 2 cut(s) 139, 838
Lsp1109I GCAGC 4 cut(s) 257, 276, 628, 878
LweI GCATC 3 cut(s) 441, 582, 906
MaeI CTAG 3 cut(s) 722, 965, 1007
MaeII ACGT 2 cut(s) 503, 1135
MaeIII GTNAC 2 cut(s) 311, 695
MalI GATC 3 cut(s) 221, 978, 990
MboI GATC 3 cut(s) 219, 976, 988
MboII GAAGA 3 cut(s) 119, 491, 1093
MflI RGATCY 1 cut(s) 219
MhlI GDGCHC 2 cut(s) 191, 879
MlsI TGGCCA 1 cut(s) 890
MluCI AATT 1 cut(s) 93
MluNI TGGCCA 1 cut(s) 890
MlyI GAGTC 3 cut(s) 9, 547, 768
MmeI TCCRAC 1 cut(s) 742
Mox20I TGGCCA 1 cut(s) 890
MroXI GAANNNNTTC 1 cut(s) 483
MscI TGGCCA 1 cut(s) 890
MseI TTAA 1 cut(s) 227
MslI CAYNNNNRTG 1 cut(s) 356
Msp20I TGGCCA 1 cut(s) 890
MspA1I CMGCKG 3 cut(s) 692, 886, 1039
MspI CCGG 3 cut(s) 216, 894, 1068
MspR9I CCNGG 4 cut(s) 53, 200, 217, 1068
MvaI CCWGG 2 cut(s) 53, 200
MvnI CGCG 3 cut(s) 852, 921, 1176
MwoI GCNNNNNNNGC 6 cut(s) 182, 251, 883, 887, 1036, 1170
NciI CCSGG 2 cut(s) 217, 1068
NdeII GATC 3 cut(s) 219, 976, 988
NheI GCTAGC 1 cut(s) 964
NlaIII CATG 2 cut(s) 305, 963
NlaIV GGNNCC 7 cut(s) 50, 102, 141, 204, 221, 596, 806
NmeAIII GCCGAG 1 cut(s) 274
NmuCI GTSAC 1 cut(s) 695
NspI RCATGY 1 cut(s) 305
PaeI GCATGC 1 cut(s) 305
PceI AGGCCT 2 cut(s) 176, 254
PcsI WCGNNNNNNNCGW 2 cut(s) 279, 444
PdmI GAANNNNTTC 1 cut(s) 483
PfeI GAWTC 2 cut(s) 1032, 1084
Pfl23II CGTACG 1 cut(s) 799
PkrI GCNGC 7 cut(s) 247, 266, 323, 618, 868, 1131, 1175
PleI GAGTC 3 cut(s) 9, 547, 768
PpsI GAGTC 3 cut(s) 9, 547, 768
PpuMI RGGWCCY 2 cut(s) 100, 805
Psp124BI GAGCTC 1 cut(s) 879
Psp5II RGGWCCY 2 cut(s) 100, 805
Psp6I CCWGG 2 cut(s) 51, 198
PspEI GGTNACC 1 cut(s) 695
PspFI CCCAGC 1 cut(s) 688
PspGI CCWGG 2 cut(s) 51, 198
PspLI CGTACG 1 cut(s) 799
PspN4I GGNNCC 7 cut(s) 50, 102, 141, 204, 221, 596, 806
PspPI GGNCC 4 cut(s) 49, 100, 805, 814
PspPPI RGGWCCY 2 cut(s) 100, 805
PstI CTGCAG 1 cut(s) 618
PsuI RGATCY 1 cut(s) 219
PvuII CAGCTG 2 cut(s) 692, 886
RsaI GTAC 5 cut(s) 236, 350, 596, 801, 1049
RsaNI GTAC 5 cut(s) 235, 349, 595, 800, 1048
RseI CAYNNNNRTG 1 cut(s) 356
SacI GAGCTC 1 cut(s) 879
SaqAI TTAA 1 cut(s) 227
SatI GCNGC 7 cut(s) 246, 265, 322, 617, 867, 1130, 1174
Sau3AI GATC 3 cut(s) 219, 976, 988
Sau96I GGNCC 4 cut(s) 49, 100, 805, 814
SchI GAGTC 3 cut(s) 9, 547, 768
ScrFI CCNGG 4 cut(s) 53, 200, 217, 1068
SduI GDGCHC 2 cut(s) 191, 879
SfaNI GCATC 3 cut(s) 441, 582, 906
SfcI CTRYAG 1 cut(s) 614
SinI GGWCC 4 cut(s) 49, 100, 805, 814
SmiMI CAYNNNNRTG 1 cut(s) 356
SmlI CTYRAG 3 cut(s) 17, 643, 776
SmoI CTYRAG 3 cut(s) 17, 643, 776
SphI GCATGC 1 cut(s) 305
Sse9I AATT 1 cut(s) 93
SseBI AGGCCT 2 cut(s) 176, 254
SsiI CCGC 6 cut(s) 322, 516, 700, 1037, 1129, 1174
SspMI CTAG 3 cut(s) 722, 965, 1007
SstI GAGCTC 1 cut(s) 879
StuI AGGCCT 2 cut(s) 176, 254
StyD4I CCNGG 4 cut(s) 51, 198, 215, 1066
StyI CCWWGG 1 cut(s) 620
TaiI ACGT 2 cut(s) 506, 1138
TaqI TCGA 4 cut(s) 162, 297, 477, 556
TaqII GACCGA 1 cut(s) 821
TasI AATT 1 cut(s) 93
TatI WGTACW 1 cut(s) 234
TauI GCSGC 3 cut(s) 324, 1132, 1176
TfiI GAWTC 2 cut(s) 1032, 1084
Tru1I TTAA 1 cut(s) 227
Tru9I TTAA 1 cut(s) 227
TscAI CASTG 4 cut(s) 525, 618, 663, 1166
TseFI GTSAC 1 cut(s) 695
TseI GCWGC 4 cut(s) 245, 264, 616, 866
Tsp45I GTSAC 1 cut(s) 695
TspDTI ATGAA 5 cut(s) 38, 64, 71, 771, 948
TspRI CASTG 4 cut(s) 525, 618, 663, 1166
VpaK11BI GGWCC 4 cut(s) 49, 100, 805, 814
XceI RCATGY 1 cut(s) 305
XmnI GAANNNNTTC 1 cut(s) 483
XspI CTAG 3 cut(s) 722, 965, 1007
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.