Rw5G034420

Uncharacterized protein K02A2.6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000160
Physical Location & Seq
Reverse (-)
59346117 .. 59348582
2466 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G034420.1

Sequence Viewer

Length: 1794 bp
ATGCCCGGGCTCAATAAAAGCTTAGTAGAATATGTATTACCTCTTAGAGATGATTGTAAACCTTACAAACAAGCACCTCGGCGATGTTCCGCCGAGGTACAAATTGAAATGAAAGAGGAAATTGAACGATTACTACATGCTAAATTTATTAGACCCGCTAGATATGTGGAATGGGTCCATAAAACCGCCTTCAGGTGCCCAAGCTTTGTTGGAACCTTTGAATGGGTAGTGATGCCTTTCGGCTTAAAGAATGCCGTAGCAACTTACCAGAGGGCCATGAATGCCATTTTTCACGATTTAATTGGTAAAACCATAGAGGTGTACATAGATGACGTGGTTGTTAAATCAAAAACCCGATCAGGACATCTAGCCGATCTTGAGCAAACATTCAAACATATGCGAAAACATAAACTTAAAATGAACCCCAAAAAGTGTGTTTTCGGAGTATCAGCGGGGAATTTTCTTGGTTTTCTCATTCACCAACGAGGAATTGAAGTCTACAAAAATAAAGCTAATGCCATTATCGACGTACCCGCTCCTTCTAACAAAAAACAGCTACAATCATTCCTTGGTCAGGTTAATTTTCTTAGACGATTCATCTCTAACTTGGCTAGTAAACTTTGGCCTTTCTCTTCTCTACTTAAGTTGAAAATTGGAGATGAATACAAGTGGGAGCCAGAGCACCAACAAGCTTTTGATGAAGTCAAGAAGTATTTAACACAACCCCCAGTGTTAGTACCTCCACAGAAAGGAAAGCCGCTGAAGCTCTACATAGCGGCCACAGCTGAATCAATTGGGAGCATGTTGGCTCAAGACAATGATCAAGGAAAAGAGCAAGCCATCCATTATTTGAGCAAAATCCTCACACCCATTGAGATAAGATATTCGCCGATTGAAAAACTATGCCTCCATCAATATGCCTTCAAACTGGACTTTAACTGCACAAATAACCAGGCTGAATATGAAGCCTTAATAATTGGCCTGGAAGTATTGGAAGAACTTGGAGCAACAAGAGTTAAGTGTTGTTTTCATGATGTAGAATTTCACCATCTTCCGCGAGAACTCAATCGTGAAGTGAATGAAATGGCTCAAATTGCTTCCGGCGTTAGCATTCCAGCAGGCCAGACTAACAAAATCATCACAATTGAGAGAAAATCGTTTCCATCTTTGGCCGAGAGAGGTATGCCGGCCAATGTCTTTGAGCTTGACGTGCCACTTGGTGATTGGAGATTTTACATAATCCAACACCTTTTGATGAAAACTGATGGCGGTGGGAGCCGAAAAATTAGAATGTTGTCTAGCAAGTTCACAATTAAAAATGGTGAACTGCTAAGGAAAAGTCCTGATGATGACCTTCTTCTTCGTTGCCTCGGCTCCAAAGATGCCCAGCTAGTAATGGCTGAAGTTCATGAGGGTATTTGCGGAGCACACCAGGCTGGGATAAAAATGAGATGGTTAATTAGGAGACATGGCTACTACTGGCCAACTATTCTTAAAGACTGTATTGAGTATGCTCGAGGCTGTGCTCCATGCCAACTTCACGGGTCCATTCAGAGAGTTCCTACTTTCCCCATGAATCCAATAGTGAAGCCATGGCCTTTTCGGGGCTGGGCAATGGATATAATTGGCCAAATTTCTCCCCCATCTTCCAAACAGCACAGATGGATACTGGTAGCCACAGACTACTTTACAAAATGGGTTGAAGCCGTTCCATTTACCTCTATAAATAGTGCTGAGGTGATCAAATTCATTGAGCAACACATCATCCACCCTTTGGTATTCCAGAAACTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 rve

Protein Analysis

597

Amino Acids

68.39

Weight (kDa)

9.23

Isoelectric Point (pI)

45.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_1 PF00078 35 - 157 2.7e-21 Reverse transcriptase (RNA-dependent DNA polymerase)
RT_RNaseH_2 PF17919 224 - 303 4.9e-19 RNase H-like domain found in reverse transcriptase
RT_RNaseH PF17917 251 - 303 1.1e-07 RNase H-like domain found in reverse transcriptase
Integrase_H2C2 PF17921 462 - 514 1.7e-08 Integrase zinc binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000160)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g11612 FvH4_2g25851 FvH4_3g22802 FvH4_3g22805 FvH4_3g31361 FvH4_3g31382 FvH4_4g05272 FvH4_4g05273 FvH4_4g14567 FvH4_4g15161 FvH4_5g22540 FvH4_6g13113 FvH4_6g31923 FvH4_6g31924 FvH4_6g33651 FvH4_6g45122 FvH4_7g03662
pyrus_communis pycom01g04240 pycom01g24010 pycom02g18210 pycom02g19420 pycom05g06510 pycom09g15750 pycom09g18940 pycom12g02580 pycom12g03100 pycom12g08310 pycom13g22710 pycom13g28060 pycom16g18340 pycom16g18350 pycom16g24880 pycom16g26240 pycom461g00260 pycom520g00980 pycom520g01320
rosa_chinensis RchiOBHm_Chr1g0320731 RchiOBHm_Chr2g0102771 RchiOBHm_Chr3g0462151 RchiOBHm_Chr5g0038141 RchiOBHm_Chr5g0069371 RchiOBHm_Chr7g0239101
rosa_multiflora Rmu_co8038252.1_g000001 Rmu_co8138412.1_g000001 Rmu_co8331087.1_g000001 Rmu_co8479311.1_g000001 Rmu_sc0000112.1_g000018 Rmu_sc0000346.1_g000012 Rmu_sc0002102.1_g000002 Rmu_sc0003505.1_g000013 Rmu_sc0004249.1_g000007 Rmu_sc0004448.1_g000010 Rmu_sc0004594.1_g000011 Rmu_sc0004915.1_g000010 Rmu_sc0008019.1_g000019 Rmu_sc0008303.1_g000001 Rmu_sc0008355.1_g000005 Rmu_sc0009253.1_g000018 Rmu_sc0010211.1_g000002 Rmu_sc0010252.1_g000009 Rmu_sc0011534.1_g000008 Rmu_sc0014811.1_g000009 Rmu_sc0019475.1_g000001 Rmu_sc0024897.1_g000001 Rmu_sc0024898.1_g000001 Rmu_sc0031791.1_g000001 Rmu_sc0038715.1_g000001
rosa_roxburghii Rroxscaffold_165G00436940 Rroxscaffold_174G00435270 Rroxscaffold_177G00434330 Rroxscaffold_177G00434340 Rroxscaffold_177G00434350 Rroxscaffold_1G00002160 Rroxscaffold_1G00025260 Rroxscaffold_1G00042950 Rroxscaffold_1G00068010 Rroxscaffold_2G00107530 Rroxscaffold_3G00221190 Rroxscaffold_3G00221520 Rroxscaffold_3G00223200 Rroxscaffold_4G00322230 Rroxscaffold_4G00331810 Rroxscaffold_5G00385150 Rroxscaffold_5G00387510 Rroxscaffold_6G00410520 Rroxscaffold_6G00423360 Rroxscaffold_6G00423370 Rroxscaffold_6G00429210 Rroxscaffold_7G00158300 Rroxscaffold_7G00163480 Rroxscaffold_7G00171410 Rroxscaffold_7G00178940 Rroxscaffold_7G00199480 Rroxscaffold_7G00205630 Rroxscaffold_7G00207440
rosa_rugosa Rorug01G0056400 Rorug04G0063900 Rorug05G0251400 Rorug07G0221900
rosa_samantha Rh1DG169400 Rh2AG292900 Rh2DG519200 Rh4DG260600 Rh5AG042600 Rh6BG117500
rosa_wichuraiana Rw0G001900 Rw0G005150 Rw0G006380 Rw0G015140 Rw0G016320 Rw0G019440 Rw0G019840 Rw0G023740 Rw1G001590 Rw1G002180 Rw1G003560 Rw1G004280 Rw1G006110 Rw1G006680 Rw1G007920 Rw1G008480 Rw1G009120 Rw1G010310 Rw1G014900 Rw1G019650 Rw1G022070 Rw1G022170 Rw1G041570 Rw2G002740 Rw2G005760 Rw2G032370 Rw2G046770 Rw2G050600 Rw2G051420 Rw3G015930 Rw3G016280 Rw3G019580 Rw3G028420 Rw4G003430 Rw4G005350 Rw4G007530 Rw4G008150 Rw4G009580 Rw4G010250 Rw4G015800 Rw4G017000 Rw4G017910 Rw4G018510 Rw4G019700 Rw4G031010 Rw5G012650 Rw5G020140 Rw5G022060 Rw5G034420 Rw5G035560 Rw5G043010 Rw5G046750 Rw5G047340 Rw5G049500 Rw6G001390 Rw6G002210 Rw6G004530 Rw6G004770 Rw6G005100 Rw6G005890 Rw6G011860 Rw6G014680 Rw6G019480 Rw6G028970 Rw6G033800 Rw7G013050 Rw7G014800 Rw7G025760 Rw7G025850 Rw7G026730 Rw7G026870 Rw7G036330 Rw7G036430 Rw7G039320 Rw7G039510 Rw7G039560 Rw7G041370 Rw7G042050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 195
AccB7I CCANNNNNTGG 1 cut(s) 1774
AccBSI CCGCTC 1 cut(s) 536
AccI GTMKAC 1 cut(s) 498
AccII CGCG 1 cut(s) 1057
AcoI YGGCCR 5 cut(s) 777, 1170, 1188, 1481, 1627
AcsI RAATTY 5 cut(s) 143, 457, 1040, 1632, 1745
AcuI CTGAAG 3 cut(s) 175, 782, 1422
AdeI CACNNNGTG 1 cut(s) 1220
AfaI GTAC 4 cut(s) 99, 323, 531, 738
AfiI CCNNNNNNNGG 6 cut(s) 192, 222, 574, 749, 1604, 1774
AflII CTTAAG 1 cut(s) 641
AgsI TTSAA 9 cut(s) 107, 125, 221, 391, 494, 649, 896, 925, 1703
AjiI CACGTC 2 cut(s) 334, 1210
AjnI CCWGG 3 cut(s) 951, 981, 1431
AluBI AGCT 9 cut(s) 21, 204, 512, 556, 692, 766, 785, 1204, 1390
AluI AGCT 9 cut(s) 21, 204, 512, 556, 692, 766, 785, 1204, 1390
Alw21I GWGCWC 3 cut(s) 684, 1429, 1528
Alw26I GTCTC 1 cut(s) 1459
Ama87I CYCGRG 2 cut(s) 5, 1515
ApoI RAATTY 5 cut(s) 143, 457, 1040, 1632, 1745
Asp700I GAANNNNTTC 1 cut(s) 1707
AspS9I GGNCC 3 cut(s) 175, 273, 1545
AsuC2I CCSGG 2 cut(s) 6, 7
AsuHPI GGTGA 5 cut(s) 470, 1037, 1232, 1334, 1750
AvaI CYCGRG 2 cut(s) 5, 1515
AvaII GGWCC 2 cut(s) 175, 1545
BaeGI GKGCMC 1 cut(s) 200
BalI TGGCCA 2 cut(s) 1483, 1629
BanI GGYRCC 1 cut(s) 195
BanII GRGCYC 1 cut(s) 12
Bbv12I GWGCWC 3 cut(s) 684, 1429, 1528
BbvCI CCTCAGC 1 cut(s) 1734
BccI CCATC 8 cut(s) 848, 918, 1056, 1171, 1259, 1446, 1651, 1656
BceAI ACGGC 2 cut(s) 239, 1691
BciT130I CCWGG 3 cut(s) 953, 983, 1433
BciVI GTATCC 1 cut(s) 1659
BclI TGATCA 2 cut(s) 820, 1740
BcnI CCSGG 2 cut(s) 6, 7
BcoDI GTCTC 1 cut(s) 1459
BfaI CTAG 5 cut(s) 159, 368, 612, 1299, 1391
BfrI CTTAAG 1 cut(s) 641
BfuI GTATCC 1 cut(s) 1659
BisI GCNGC 2 cut(s) 758, 777
BlsI GCNGC 2 cut(s) 759, 778
Bme1390I CCNGG 5 cut(s) 6, 7, 953, 983, 1433
Bme18I GGWCC 2 cut(s) 175, 1545
BmeT110I CYCGRG 2 cut(s) 5, 1515
BmgBI CACGTC 2 cut(s) 334, 1210
BmgT120I GGNCC 3 cut(s) 175, 273, 1545
BmiI GGNNCC 7 cut(s) 176, 197, 214, 675, 1277, 1375, 1546
BmrFI CCNGG 5 cut(s) 6, 7, 953, 983, 1433
BmrI ACTGGG 1 cut(s) 722
BmsI GCATC 2 cut(s) 222, 1372
BmuI ACTGGG 1 cut(s) 722
Bpu10I CCTNAGC 2 cut(s) 1331, 1734
BpuEI CTTGAG 2 cut(s) 398, 795
BpuMI CCSGG 2 cut(s) 6, 7
BsaJI CCNNGG 6 cut(s) 5, 77, 93, 568, 1369, 1592
BsaXI ACNNNNNCTCC 2 cut(s) 891, 921
Bsc4I CCNNNNNNNGG 6 cut(s) 192, 222, 574, 749, 1604, 1774
Bse118I RCCGGY 1 cut(s) 1186
Bse1I ACTGG 4 cut(s) 728, 933, 1484, 1674
Bse3DI GCAATG 1 cut(s) 1620
BseBI CCWGG 3 cut(s) 953, 983, 1433
BseDI CCNNGG 6 cut(s) 5, 77, 93, 568, 1369, 1592
BseGI GGATG 2 cut(s) 840, 1764
BseLI CCNNNNNNNGG 6 cut(s) 192, 222, 574, 749, 1604, 1774
BseMI GCAATG 1 cut(s) 1620
BseMII CTCAG 1 cut(s) 1725
BseNI ACTGG 4 cut(s) 728, 933, 1484, 1674
BseSI GKGCMC 1 cut(s) 200
BseYI CCCAGC 3 cut(s) 1386, 1436, 1608
BsgI GTGCAG 1 cut(s) 925
Bsh1236I CGCG 1 cut(s) 1057
BshNI GGYRCC 1 cut(s) 195
BsiHKAI GWGCWC 3 cut(s) 684, 1429, 1528
BsiHKCI CYCGRG 2 cut(s) 5, 1515
BsiSI CCGG 3 cut(s) 6, 1101, 1187
BslI CCNNNNNNNGG 6 cut(s) 192, 222, 574, 749, 1604, 1774
BsmAI GTCTC 1 cut(s) 1459
BsmI GAATGC 3 cut(s) 256, 286, 1110
BsoBI CYCGRG 2 cut(s) 5, 1515
Bsp1286I GDGCHC 5 cut(s) 12, 200, 684, 1429, 1528
Bsp1407I TGTACA 1 cut(s) 321
Bsp143I GATC 4 cut(s) 356, 373, 820, 1740
Bsp19I CCATGG 1 cut(s) 1592
BspCNI CTCAG 1 cut(s) 1726
BspFNI CGCG 1 cut(s) 1057
BspHI TCATGA 2 cut(s) 1030, 1408
BspLI GGNNCC 7 cut(s) 176, 197, 214, 675, 1277, 1375, 1546
BspT107I GGYRCC 1 cut(s) 195
BspTI CTTAAG 1 cut(s) 641
BsrBI CCGCTC 1 cut(s) 536
BsrDI GCAATG 1 cut(s) 1620
BsrFI RCCGGY 1 cut(s) 1186
BsrGI TGTACA 1 cut(s) 321
BsrI ACTGG 4 cut(s) 728, 933, 1484, 1674
BssAI RCCGGY 1 cut(s) 1186
BssECI CCNNGG 6 cut(s) 5, 77, 93, 568, 1369, 1592
BssMI GATC 4 cut(s) 356, 373, 820, 1740
BssT1I CCWWGG 2 cut(s) 568, 1592
Bst2UI CCWGG 3 cut(s) 953, 983, 1433
Bst4CI ACNGT 1 cut(s) 1502
Bst6I CTCTTC 1 cut(s) 637
BstAFI CTTAAG 1 cut(s) 641
BstAUI TGTACA 1 cut(s) 321
BstC8I GCNNGC 3 cut(s) 837, 1120, 1188
BstDEI CTNAG 5 cut(s) 22, 44, 587, 1331, 1734
BstDSI CCRYGG 1 cut(s) 1592
BstENI CCTNNNNNAGG 1 cut(s) 572
BstF5I GGATG 2 cut(s) 840, 1764
BstFNI CGCG 1 cut(s) 1057
BstKTI GATC 4 cut(s) 359, 376, 823, 1743
BstMAI GTCTC 1 cut(s) 1459
BstMBI GATC 4 cut(s) 356, 373, 820, 1740
BstMWI GCNNNNNNNGC 7 cut(s) 281, 763, 782, 1094, 1210, 1275, 1433
BstNI CCWGG 3 cut(s) 953, 983, 1433
BstNSI RCATGY 2 cut(s) 140, 805
BstSCI CCNGG 5 cut(s) 4, 5, 951, 981, 1431
BstSLI GKGCMC 1 cut(s) 200
BstUI CGCG 1 cut(s) 1057
BsuI GTATCC 1 cut(s) 1659
BtgI CCRYGG 1 cut(s) 1592
BtgZI GCGATG 1 cut(s) 97
BtrI CACGTC 2 cut(s) 334, 1210
BtsCI GGATG 2 cut(s) 840, 1764
BtsIMutI CAGTG 1 cut(s) 735
Cac8I GCNNGC 3 cut(s) 837, 1120, 1188
CciI TCATGA 2 cut(s) 1030, 1408
Cfr10I RCCGGY 1 cut(s) 1186
Cfr13I GGNCC 3 cut(s) 175, 273, 1545
Cfr9I CCCGGG 1 cut(s) 5
Csp6I GTAC 4 cut(s) 98, 322, 530, 737
CviAII CATG 9 cut(s) 137, 277, 802, 1031, 1409, 1469, 1530, 1573, 1593
CviQI GTAC 4 cut(s) 98, 322, 530, 737
DdeI CTNAG 5 cut(s) 22, 44, 587, 1331, 1734
DpnI GATC 4 cut(s) 358, 375, 822, 1742
DpnII GATC 4 cut(s) 356, 373, 820, 1740
DraIII CACNNNGTG 1 cut(s) 1220
EaeI YGGCCR 5 cut(s) 777, 1170, 1188, 1481, 1627
Eam1104I CTCTTC 1 cut(s) 637
EarI CTCTTC 1 cut(s) 637
EciI GGCGGA 1 cut(s) 79
Eco130I CCWWGG 2 cut(s) 568, 1592
Eco24I GRGCYC 1 cut(s) 12
Eco47I GGWCC 2 cut(s) 175, 1545
Eco57I CTGAAG 3 cut(s) 175, 782, 1422
Eco88I CYCGRG 2 cut(s) 5, 1515
EcoNI CCTNNNNNAGG 1 cut(s) 572
EcoRII CCWGG 3 cut(s) 951, 981, 1431
EcoT14I CCWWGG 2 cut(s) 568, 1592
EcoT38I GRGCYC 1 cut(s) 12
ErhI CCWWGG 2 cut(s) 568, 1592
FaeI CATG 9 cut(s) 140, 280, 805, 1034, 1412, 1472, 1533, 1576, 1596
FatI CATG 9 cut(s) 136, 276, 801, 1030, 1408, 1468, 1529, 1572, 1592
FauI CCCGC 3 cut(s) 163, 445, 541
FauNDI CATATG 1 cut(s) 396
FbaI TGATCA 2 cut(s) 820, 1740
FblI GTMKAC 1 cut(s) 498
Fnu4HI GCNGC 2 cut(s) 758, 777
FokI GGATG 2 cut(s) 827, 1751
FriOI GRGCYC 1 cut(s) 12
Fsp4HI GCNGC 2 cut(s) 758, 777
FspBI CTAG 5 cut(s) 159, 368, 612, 1299, 1391
GluI GCNGC 2 cut(s) 758, 777
GsaI CCCAGC 3 cut(s) 1390, 1440, 1612
HapII CCGG 3 cut(s) 6, 1101, 1187
Hin1II CATG 9 cut(s) 140, 280, 805, 1034, 1412, 1472, 1533, 1576, 1596
HindIII AAGCTT 3 cut(s) 19, 202, 690
HinfI GANTC 3 cut(s) 594, 788, 1576
HpaII CCGG 3 cut(s) 6, 1101, 1187
HphI GGTGA 5 cut(s) 470, 1037, 1232, 1334, 1750
Hpy166II GTNNAC 6 cut(s) 59, 322, 499, 617, 1308, 1325
Hpy188I TCNGA 2 cut(s) 443, 1554
Hpy8I GTNNAC 6 cut(s) 59, 322, 499, 617, 1308, 1325
Hpy99I CGWCG 1 cut(s) 530
HpyAV CCTTC 4 cut(s) 199, 549, 931, 1364
HpyCH4III ACNGT 1 cut(s) 1502
HpyCH4IV ACGT 3 cut(s) 333, 528, 1209
HpyCH4V TGCA 1 cut(s) 942
HpyF10VI GCNNNNNNNGC 7 cut(s) 281, 763, 782, 1094, 1210, 1275, 1433
HpyF3I CTNAG 5 cut(s) 22, 44, 587, 1331, 1734
HpySE526I ACGT 3 cut(s) 333, 528, 1209
Hsp92II CATG 9 cut(s) 140, 280, 805, 1034, 1412, 1472, 1533, 1576, 1596
KroI GCCGGC 1 cut(s) 1186
KroNI GCCGGC 1 cut(s) 1188
Ksp22I TGATCA 2 cut(s) 820, 1740
Kzo9I GATC 4 cut(s) 356, 373, 820, 1740
LmnI GCTCC 8 cut(s) 541, 673, 798, 1004, 1275, 1379, 1424, 1531
LweI GCATC 2 cut(s) 222, 1372
MaeI CTAG 5 cut(s) 159, 368, 612, 1299, 1391
MaeII ACGT 3 cut(s) 333, 528, 1209
MalI GATC 4 cut(s) 358, 375, 822, 1742
MbiI CCGCTC 1 cut(s) 536
MboI GATC 4 cut(s) 356, 373, 820, 1740
MboII GAAGA 6 cut(s) 624, 1007, 1043, 1349, 1352, 1638
MfeI CAATTG 2 cut(s) 792, 1143
MhlI GDGCHC 5 cut(s) 12, 200, 684, 1429, 1528
MlsI TGGCCA 2 cut(s) 1483, 1629
MluNI TGGCCA 2 cut(s) 1483, 1629
MmeI TCCRAC 2 cut(s) 190, 1267
Mox20I TGGCCA 2 cut(s) 1483, 1629
MroNI GCCGGC 1 cut(s) 1186
MroXI GAANNNNTTC 1 cut(s) 1707
MscI TGGCCA 2 cut(s) 1483, 1629
MslI CAYNNNNRTG 2 cut(s) 317, 915
Msp20I TGGCCA 2 cut(s) 1483, 1629
MspA1I CMGCKG 3 cut(s) 452, 760, 785
MspCI CTTAAG 1 cut(s) 641
MspI CCGG 3 cut(s) 6, 1101, 1187
MspR9I CCNGG 5 cut(s) 6, 7, 953, 983, 1433
MunI CAATTG 2 cut(s) 792, 1143
Mva1269I GAATGC 3 cut(s) 256, 286, 1110
MvaI CCWGG 3 cut(s) 953, 983, 1433
MvnI CGCG 1 cut(s) 1057
MwoI GCNNNNNNNGC 7 cut(s) 281, 763, 782, 1094, 1210, 1275, 1433
NaeI GCCGGC 1 cut(s) 1188
NciI CCSGG 2 cut(s) 6, 7
NcoI CCATGG 1 cut(s) 1592
NdeI CATATG 1 cut(s) 396
NdeII GATC 4 cut(s) 356, 373, 820, 1740
NgoMIV GCCGGC 1 cut(s) 1186
NlaIII CATG 9 cut(s) 140, 280, 805, 1034, 1412, 1472, 1533, 1576, 1596
NlaIV GGNNCC 7 cut(s) 176, 197, 214, 675, 1277, 1375, 1546
NmeAIII GCCGAG 4 cut(s) 58, 118, 1198, 1350
NspI RCATGY 2 cut(s) 140, 805
PaeR7I CTCGAG 1 cut(s) 1515
PagI TCATGA 2 cut(s) 1030, 1408
PctI GAATGC 3 cut(s) 256, 286, 1110
PdiI GCCGGC 1 cut(s) 1188
PdmI GAANNNNTTC 1 cut(s) 1707
PfeI GAWTC 3 cut(s) 594, 788, 1576
PflMI CCANNNNNTGG 1 cut(s) 1774
PkrI GCNGC 2 cut(s) 759, 778
Psp6I CCWGG 3 cut(s) 951, 981, 1431
PspFI CCCAGC 3 cut(s) 1386, 1436, 1608
PspGI CCWGG 3 cut(s) 951, 981, 1431
PspN4I GGNNCC 7 cut(s) 176, 197, 214, 675, 1277, 1375, 1546
PspPI GGNCC 3 cut(s) 175, 273, 1545
PspXI VCTCGAGB 1 cut(s) 1515
PsrI GAACNNNNNNTAC 2 cut(s) 117, 149
PvuII CAGCTG 1 cut(s) 785
RsaI GTAC 4 cut(s) 99, 323, 531, 738
RsaNI GTAC 4 cut(s) 98, 322, 530, 737
RseI CAYNNNNRTG 2 cut(s) 317, 915
SatI GCNGC 2 cut(s) 758, 777
Sau3AI GATC 4 cut(s) 356, 373, 820, 1740
Sau96I GGNCC 3 cut(s) 175, 273, 1545
ScrFI CCNGG 5 cut(s) 6, 7, 953, 983, 1433
SduI GDGCHC 5 cut(s) 12, 200, 684, 1429, 1528
SfaNI GCATC 2 cut(s) 222, 1372
Sfr274I CTCGAG 1 cut(s) 1515
SinI GGWCC 2 cut(s) 175, 1545
SlaI CTCGAG 1 cut(s) 1515
SmaI CCCGGG 1 cut(s) 7
SmiMI CAYNNNNRTG 2 cut(s) 317, 915
SmlI CTYRAG 4 cut(s) 377, 641, 810, 1515
SmoI CTYRAG 4 cut(s) 377, 641, 810, 1515
SrfI GCCCGGGC 1 cut(s) 7
SspMI CTAG 5 cut(s) 159, 368, 612, 1299, 1391
StyD4I CCNGG 5 cut(s) 4, 5, 951, 981, 1431
StyI CCWWGG 2 cut(s) 568, 1592
TaaI ACNGT 1 cut(s) 1502
TaiI ACGT 3 cut(s) 336, 531, 1212
TaqI TCGA 2 cut(s) 525, 1516
TatI WGTACW 1 cut(s) 321
TauI GCSGC 2 cut(s) 760, 779
TfiI GAWTC 3 cut(s) 594, 788, 1576
TscAI CASTG 1 cut(s) 735
TspMI CCCGGG 1 cut(s) 5
TspRI CASTG 1 cut(s) 735
Van91I CCANNNNNTGG 1 cut(s) 1774
Vha464I CTTAAG 1 cut(s) 641
VpaK11BI GGWCC 2 cut(s) 175, 1545
XagI CCTNNNNNAGG 1 cut(s) 572
XapI RAATTY 5 cut(s) 143, 457, 1040, 1632, 1745
XceI RCATGY 2 cut(s) 140, 805
XcmI CCANNNNNNNNNTGG 1 cut(s) 1221
XhoI CTCGAG 1 cut(s) 1515
XmaI CCCGGG 1 cut(s) 5
XmiI GTMKAC 1 cut(s) 498
XmnI GAANNNNTTC 1 cut(s) 1707
XspI CTAG 5 cut(s) 159, 368, 612, 1299, 1391
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.