Protein kinase domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_14 | PF23598 | 93 - 228 | 3.3e-06 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 209 - 365 | 7.5e-07 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 267 - 326 | 2.3e-07 | Leucine rich repeat |
| Malectin | PF11721 | 445 - 629 | 1.3e-41 | Malectin domain |
| PK_Tyr_Ser-Thr | PF07714 | 712 - 976 | 1.1e-45 | Protein tyrosine and serine/threonine kinase |
| Pkinase | PF00069 | 712 - 912 | 1.7e-42 | Protein kinase domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1329, 2175 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 847 |
| AccB1I | GGYRCC | 1 cut(s) | 91 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3116 |
| AccBSI | CCGCTC | 1 cut(s) | 693 |
| AccI | GTMKAC | 2 cut(s) | 851, 943 |
| AccII | CGCG | 4 cut(s) | 52, 74, 398, 1400 |
| AclWI | GGATC | 6 cut(s) | 667, 680, 978, 991, 1410, 2236 |
| AcoI | YGGCCR | 1 cut(s) | 1881 |
| AcsI | RAATTY | 2 cut(s) | 358, 1465 |
| AcuI | CTGAAG | 3 cut(s) | 1607, 1653, 2262 |
| AcyI | GRCGYC | 3 cut(s) | 92, 132, 144 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 353, 1856, 1937, 2746, 3116 |
| AflII | CTTAAG | 2 cut(s) | 937, 2108 |
| AflIII | ACRYGT | 3 cut(s) | 396, 972, 1838 |
| AjnI | CCWGG | 4 cut(s) | 1698, 2739, 2971, 3070 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 729, 761, 907, 939 |
| Alw21I | GWGCWC | 2 cut(s) | 282, 1381 |
| Alw26I | GTCTC | 5 cut(s) | 348, 1014, 2375, 2896, 3087 |
| AlwI | GGATC | 6 cut(s) | 667, 680, 978, 991, 1410, 2236 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1012 |
| AoxI | GGCC | 8 cut(s) | 406, 694, 1351, 1868, 1881, 1925, 2508, 3073 |
| ApeKI | GCWGC | 3 cut(s) | 1433, 1448, 2316 |
| ApoI | RAATTY | 2 cut(s) | 358, 1465 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2978, 3010 |
| AseI | ATTAAT | 1 cut(s) | 1874 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 769, 1166 |
| AspA2I | CCTAGG | 1 cut(s) | 313 |
| AspLEI | GCGC | 4 cut(s) | 52, 94, 2635, 3070 |
| AsuC2I | CCSGG | 1 cut(s) | 3077 |
| AsuHPI | GGTGA | 3 cut(s) | 292, 761, 2221 |
| AsuII | TTCGAA | 1 cut(s) | 2026 |
| AvaII | GGWCC | 6 cut(s) | 263, 285, 651, 911, 1409, 2539 |
| AvrII | CCTAGG | 1 cut(s) | 313 |
| AxyI | CCTNAGG | 2 cut(s) | 417, 1574 |
| BaeI | ACNNNNGTAYC | 6 cut(s) | 856, 889, 1773, 1806, 1947, 1980 |
| BamHI | GGATCC | 2 cut(s) | 672, 983 |
| BanI | GGYRCC | 1 cut(s) | 91 |
| BanII | GRGCYC | 3 cut(s) | 13, 282, 1268 |
| BauI | CACGAG | 3 cut(s) | 2468, 2786, 2916 |
| BbsI | GAAGAC | 3 cut(s) | 1046, 1681, 1711 |
| Bbv12I | GWGCWC | 2 cut(s) | 282, 1381 |
| BbvCI | CCTCAGC | 1 cut(s) | 2946 |
| BbvI | GCAGC | 3 cut(s) | 1420, 1460, 2303 |
| BccI | CCATC | 6 cut(s) | 74, 146, 1437, 1821, 1939, 2186 |
| BceAI | ACGGC | 3 cut(s) | 1868, 2249, 3112 |
| BciT130I | CCWGG | 4 cut(s) | 1700, 2741, 2973, 3072 |
| BciVI | GTATCC | 2 cut(s) | 621, 857 |
| BcnI | CCSGG | 1 cut(s) | 3077 |
| BcoDI | GTCTC | 5 cut(s) | 348, 1014, 2375, 2896, 3087 |
| BfaI | CTAG | 9 cut(s) | 314, 1094, 1322, 1508, 1595, 2297, 2456, 2708, 3045 |
| BfmI | CTRYAG | 3 cut(s) | 196, 515, 1157 |
| BfoI | RGCGCY | 2 cut(s) | 95, 3071 |
| BfrI | CTTAAG | 2 cut(s) | 937, 2108 |
| BfuI | GTATCC | 2 cut(s) | 621, 857 |
| BisI | GCNGC | 8 cut(s) | 75, 115, 223, 694, 1434, 1449, 1881, 2317 |
| BlnI | CCTAGG | 1 cut(s) | 313 |
| BlsI | GCNGC | 8 cut(s) | 76, 116, 224, 695, 1435, 1450, 1882, 2318 |
| Bme1390I | CCNGG | 5 cut(s) | 1700, 2741, 2973, 3072, 3077 |
| Bme18I | GGWCC | 6 cut(s) | 263, 285, 651, 911, 1409, 2539 |
| BmiI | GGNNCC | 6 cut(s) | 93, 481, 674, 985, 1267, 2541 |
| BmrFI | CCNGG | 5 cut(s) | 1700, 2741, 2973, 3072, 3077 |
| BmrI | ACTGGG | 1 cut(s) | 846 |
| BmsI | GCATC | 8 cut(s) | 37, 360, 1574, 2004, 2413, 2932, 2947, 3072 |
| BmuI | ACTGGG | 1 cut(s) | 846 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1317 |
| BpiI | GAAGAC | 3 cut(s) | 1046, 1681, 1711 |
| BpmI | CTGGAG | 1 cut(s) | 258 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2946 |
| Bpu14I | TTCGAA | 1 cut(s) | 2026 |
| BpuEI | CTTGAG | 2 cut(s) | 688, 2723 |
| BpuMI | CCSGG | 1 cut(s) | 3077 |
| Bsa29I | ATCGAT | 1 cut(s) | 531 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2130 |
| BsaHI | GRCGYC | 3 cut(s) | 92, 132, 144 |
| BsaI | GGTCTC | 1 cut(s) | 2896 |
| BsaJI | CCNNGG | 5 cut(s) | 95, 313, 676, 1699, 1855 |
| BsaWI | WCCGGW | 1 cut(s) | 476 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 353, 1856, 1937, 2746, 3116 |
| Bse1I | ACTGG | 9 cut(s) | 147, 688, 841, 1119, 1319, 1452, 1957, 2529, 2541 |
| Bse21I | CCTNAGG | 2 cut(s) | 417, 1574 |
| Bse3DI | GCAATG | 2 cut(s) | 1150, 2865 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2130 |
| BseBI | CCWGG | 4 cut(s) | 1700, 2741, 2973, 3072 |
| BseCI | ATCGAT | 1 cut(s) | 531 |
| BseDI | CCNNGG | 5 cut(s) | 95, 313, 676, 1699, 1855 |
| BseGI | GGATG | 4 cut(s) | 37, 375, 384, 613 |
| BseJI | GATNNNNATC | 1 cut(s) | 2130 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 353, 1856, 1937, 2746, 3116 |
| BseMI | GCAATG | 2 cut(s) | 1150, 2865 |
| BseMII | CTCAG | 7 cut(s) | 483, 559, 731, 1004, 1548, 2897, 2937 |
| BseNI | ACTGG | 9 cut(s) | 147, 688, 841, 1119, 1319, 1452, 1957, 2529, 2541 |
| BseRI | GAGGAG | 1 cut(s) | 3004 |
| BseX3I | CGGCCG | 1 cut(s) | 1881 |
| BseXI | GCAGC | 3 cut(s) | 1420, 1460, 2303 |
| Bsh1236I | CGCG | 4 cut(s) | 52, 74, 398, 1400 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1884 |
| BshFI | GGCC | 8 cut(s) | 408, 696, 1353, 1870, 1883, 1927, 2510, 3075 |
| BshNI | GGYRCC | 1 cut(s) | 91 |
| BshVI | ATCGAT | 1 cut(s) | 531 |
| BsiEI | CGRYCG | 1 cut(s) | 1884 |
| BsiHKAI | GWGCWC | 2 cut(s) | 282, 1381 |
| BsiSI | CCGG | 4 cut(s) | 129, 477, 920, 3077 |
| BslFI | GGGAC | 4 cut(s) | 853, 2259, 2525, 2629 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 353, 1856, 1937, 2746, 3116 |
| BsmAI | GTCTC | 5 cut(s) | 348, 1014, 2375, 2896, 3087 |
| BsmBI | CGTCTC | 1 cut(s) | 3087 |
| BsmFI | GGGAC | 4 cut(s) | 853, 2259, 2525, 2629 |
| BsmI | GAATGC | 1 cut(s) | 2119 |
| BsnI | GGCC | 8 cut(s) | 408, 696, 1353, 1870, 1883, 1927, 2510, 3075 |
| Bso31I | GGTCTC | 1 cut(s) | 2896 |
| Bsp119I | TTCGAA | 1 cut(s) | 2026 |
| Bsp1286I | GDGCHC | 4 cut(s) | 13, 282, 1268, 1381 |
| Bsp1407I | TGTACA | 3 cut(s) | 506, 525, 2990 |
| Bsp143I | GATC | 9 cut(s) | 672, 983, 1338, 1402, 2131, 2228, 2329, 2374, 3126 |
| BspANI | GGCC | 8 cut(s) | 408, 696, 1353, 1870, 1883, 1927, 2510, 3075 |
| BspCNI | CTCAG | 7 cut(s) | 484, 558, 732, 1005, 1547, 2896, 2938 |
| BspDI | ATCGAT | 1 cut(s) | 531 |
| BspFNI | CGCG | 4 cut(s) | 52, 74, 398, 1400 |
| BspLI | GGNNCC | 6 cut(s) | 93, 481, 674, 985, 1267, 2541 |
| BspMAI | CTGCAG | 1 cut(s) | 1161 |
| BspPI | GGATC | 6 cut(s) | 667, 680, 978, 991, 1410, 2236 |
| BspQI | GCTCTTC | 2 cut(s) | 775, 1756 |
| BspT104I | TTCGAA | 1 cut(s) | 2026 |
| BspT107I | GGYRCC | 1 cut(s) | 91 |
| BspTI | CTTAAG | 2 cut(s) | 937, 2108 |
| BspTNI | GGTCTC | 1 cut(s) | 2896 |
| BsrBI | CCGCTC | 1 cut(s) | 693 |
| BsrDI | GCAATG | 2 cut(s) | 1150, 2865 |
| BsrGI | TGTACA | 3 cut(s) | 506, 525, 2990 |
| BsrI | ACTGG | 9 cut(s) | 147, 688, 841, 1119, 1319, 1452, 1957, 2529, 2541 |
| BssECI | CCNNGG | 5 cut(s) | 95, 313, 676, 1699, 1855 |
| BssMI | GATC | 9 cut(s) | 672, 983, 1338, 1402, 2131, 2228, 2329, 2374, 3126 |
| BssNI | GRCGYC | 3 cut(s) | 92, 132, 144 |
| BssSI | CACGAG | 3 cut(s) | 2468, 2786, 2916 |
| BssT1I | CCWWGG | 2 cut(s) | 313, 1855 |
| Bst2BI | CACGAG | 3 cut(s) | 2468, 2786, 2916 |
| Bst2UI | CCWGG | 4 cut(s) | 1700, 2741, 2973, 3072 |
| Bst4CI | ACNGT | 9 cut(s) | 197, 342, 705, 849, 1615, 1915, 2043, 2798, 2990 |
| Bst6I | CTCTTC | 5 cut(s) | 775, 1756, 2052, 2191, 2739 |
| BstACI | GRCGYC | 3 cut(s) | 92, 132, 144 |
| BstAFI | CTTAAG | 2 cut(s) | 937, 2108 |
| BstAUI | TGTACA | 3 cut(s) | 506, 525, 2990 |
| BstBI | TTCGAA | 1 cut(s) | 2026 |
| BstC8I | GCNNGC | 5 cut(s) | 54, 1157, 1474, 2512, 2565 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1854, 2744 |
| BstF5I | GGATG | 4 cut(s) | 37, 375, 384, 613 |
| BstFNI | CGCG | 4 cut(s) | 52, 74, 398, 1400 |
| BstH2I | RGCGCY | 2 cut(s) | 95, 3071 |
| BstHHI | GCGC | 4 cut(s) | 52, 94, 2635, 3070 |
| BstKTI | GATC | 9 cut(s) | 675, 986, 1341, 1405, 2134, 2231, 2332, 2377, 3129 |
| BstMAI | GTCTC | 5 cut(s) | 348, 1014, 2375, 2896, 3087 |
| BstMBI | GATC | 9 cut(s) | 672, 983, 1338, 1402, 2131, 2228, 2329, 2374, 3126 |
| BstMCI | CGRYCG | 1 cut(s) | 1884 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 123, 143, 1182, 1889, 2862 |
| BstNI | CCWGG | 4 cut(s) | 1700, 2741, 2973, 3072 |
| BstNSI | RCATGY | 1 cut(s) | 1842 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1317 |
| BstSCI | CCNGG | 5 cut(s) | 1698, 2739, 2971, 3070, 3075 |
| BstSFI | CTRYAG | 3 cut(s) | 196, 515, 1157 |
| BstUI | CGCG | 4 cut(s) | 52, 74, 398, 1400 |
| BstV1I | GCAGC | 3 cut(s) | 1420, 1460, 2303 |
| BstV2I | GAAGAC | 3 cut(s) | 1046, 1681, 1711 |
| BstX2I | RGATCY | 3 cut(s) | 672, 983, 1402 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 282 |
| BstYI | RGATCY | 3 cut(s) | 672, 983, 1402 |
| BstZI | CGGCCG | 1 cut(s) | 1881 |
| Bsu15I | ATCGAT | 1 cut(s) | 531 |
| Bsu36I | CCTNAGG | 2 cut(s) | 417, 1574 |
| BsuI | GTATCC | 2 cut(s) | 621, 857 |
| BsuRI | GGCC | 8 cut(s) | 408, 696, 1353, 1870, 1883, 1927, 2510, 3075 |
| BsuTUI | ATCGAT | 1 cut(s) | 531 |
| BtgZI | GCGATG | 1 cut(s) | 2273 |
| BtsCI | GGATG | 4 cut(s) | 37, 375, 384, 613 |
| BtsI | GCAGTG | 1 cut(s) | 380 |
| BtsIMutI | CAGTG | 6 cut(s) | 154, 338, 380, 834, 1112, 1894 |
| Cac8I | GCNNGC | 5 cut(s) | 54, 1157, 1474, 2512, 2565 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1012 |
| CfoI | GCGC | 4 cut(s) | 52, 94, 2635, 3070 |
| ClaI | ATCGAT | 1 cut(s) | 531 |
| CseI | GACGC | 3 cut(s) | 121, 152, 1406 |
| DinI | GGCGCC | 1 cut(s) | 93 |
| DpnI | GATC | 9 cut(s) | 674, 985, 1340, 1404, 2133, 2230, 2331, 2376, 3128 |
| DpnII | GATC | 9 cut(s) | 672, 983, 1338, 1402, 2131, 2228, 2329, 2374, 3126 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 847 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 847 |
| EaeI | YGGCCR | 1 cut(s) | 1881 |
| EagI | CGGCCG | 1 cut(s) | 1881 |
| Eam1104I | CTCTTC | 5 cut(s) | 775, 1756, 2052, 2191, 2739 |
| EarI | CTCTTC | 5 cut(s) | 775, 1756, 2052, 2191, 2739 |
| Ecl136II | GAGCTC | 1 cut(s) | 280 |
| EclXI | CGGCCG | 1 cut(s) | 1881 |
| Eco130I | CCWWGG | 2 cut(s) | 313, 1855 |
| Eco24I | GRGCYC | 3 cut(s) | 13, 282, 1268 |
| Eco31I | GGTCTC | 1 cut(s) | 2896 |
| Eco47I | GGWCC | 6 cut(s) | 263, 285, 651, 911, 1409, 2539 |
| Eco52I | CGGCCG | 1 cut(s) | 1881 |
| Eco53kI | GAGCTC | 1 cut(s) | 280 |
| Eco57I | CTGAAG | 3 cut(s) | 1607, 1653, 2262 |
| Eco81I | CCTNAGG | 2 cut(s) | 417, 1574 |
| EcoICRI | GAGCTC | 1 cut(s) | 280 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1854, 2744 |
| EcoO109I | RGGNCCY | 1 cut(s) | 263 |
| EcoRII | CCWGG | 4 cut(s) | 1698, 2739, 2971, 3070 |
| EcoT14I | CCWWGG | 2 cut(s) | 313, 1855 |
| EcoT38I | GRGCYC | 3 cut(s) | 13, 282, 1268 |
| EgeI | GGCGCC | 1 cut(s) | 93 |
| EheI | GGCGCC | 1 cut(s) | 93 |
| ErhI | CCWWGG | 2 cut(s) | 313, 1855 |
| Esp3I | CGTCTC | 1 cut(s) | 3087 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1042, 1074, 1800, 1832, 2049, 2081 |
| FaqI | GGGAC | 4 cut(s) | 853, 2259, 2525, 2629 |
| FauI | CCCGC | 1 cut(s) | 1996 |
| FauNDI | CATATG | 1 cut(s) | 1255 |
| FblI | GTMKAC | 2 cut(s) | 851, 943 |
| Fnu4HI | GCNGC | 8 cut(s) | 75, 115, 223, 694, 1434, 1449, 1881, 2317 |
| FokI | GGATG | 4 cut(s) | 24, 382, 391, 620 |
| FriOI | GRGCYC | 3 cut(s) | 13, 282, 1268 |
| Fsp4HI | GCNGC | 8 cut(s) | 75, 115, 223, 694, 1434, 1449, 1881, 2317 |
| FspBI | CTAG | 9 cut(s) | 314, 1094, 1322, 1508, 1595, 2297, 2456, 2708, 3045 |
| GlaI | GCGC | 4 cut(s) | 51, 93, 2634, 3069 |
| GluI | GCNGC | 8 cut(s) | 75, 115, 223, 694, 1434, 1449, 1881, 2317 |
| GsuI | CTGGAG | 1 cut(s) | 258 |
| HaeII | RGCGCY | 2 cut(s) | 95, 3071 |
| HaeIII | GGCC | 8 cut(s) | 408, 696, 1353, 1870, 1883, 1927, 2510, 3075 |
| HapII | CCGG | 4 cut(s) | 129, 477, 920, 3077 |
| HgaI | GACGC | 3 cut(s) | 121, 152, 1406 |
| HhaI | GCGC | 4 cut(s) | 52, 94, 2635, 3070 |
| Hin1I | GRCGYC | 3 cut(s) | 92, 132, 144 |
| Hin6I | GCGC | 4 cut(s) | 50, 92, 2633, 3068 |
| HinP1I | GCGC | 4 cut(s) | 50, 92, 2633, 3068 |
| HincII | GTYRAC | 2 cut(s) | 944, 2418 |
| HindII | GTYRAC | 2 cut(s) | 944, 2418 |
| HindIII | AAGCTT | 1 cut(s) | 2144 |
| HpaII | CCGG | 4 cut(s) | 129, 477, 920, 3077 |
| HphI | GGTGA | 3 cut(s) | 292, 761, 2221 |
| Hpy166II | GTNNAC | 7 cut(s) | 152, 852, 944, 1611, 2046, 2418, 2654 |
| Hpy8I | GTNNAC | 7 cut(s) | 152, 852, 944, 1611, 2046, 2418, 2654 |
| Hpy99I | CGWCG | 6 cut(s) | 47, 137, 146, 709, 1683, 3058 |
| HpyAV | CCTTC | 8 cut(s) | 1068, 1112, 1181, 1640, 2236, 2318, 2500, 2712 |
| HpyCH4III | ACNGT | 9 cut(s) | 197, 342, 705, 849, 1615, 1915, 2043, 2798, 2990 |
| HpyCH4IV | ACGT | 4 cut(s) | 974, 1681, 2076, 2802 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 123, 143, 1182, 1889, 2862 |
| HpySE526I | ACGT | 4 cut(s) | 974, 1681, 2076, 2802 |
| Hsp92I | GRCGYC | 3 cut(s) | 92, 132, 144 |
| HspAI | GCGC | 4 cut(s) | 50, 92, 2633, 3068 |
| KasI | GGCGCC | 1 cut(s) | 91 |
| Kzo9I | GATC | 9 cut(s) | 672, 983, 1338, 1402, 2131, 2228, 2329, 2374, 3126 |
| LguI | GCTCTTC | 2 cut(s) | 775, 1756 |
| LmnI | GCTCC | 4 cut(s) | 131, 1271, 1376, 3017 |
| Lsp1109I | GCAGC | 3 cut(s) | 1420, 1460, 2303 |
| LweI | GCATC | 8 cut(s) | 37, 360, 1574, 2004, 2413, 2932, 2947, 3072 |
| MaeI | CTAG | 9 cut(s) | 314, 1094, 1322, 1508, 1595, 2297, 2456, 2708, 3045 |
| MaeII | ACGT | 4 cut(s) | 974, 1681, 2076, 2802 |
| MaeIII | GTNAC | 4 cut(s) | 1202, 1615, 2798, 2913 |
| MalI | GATC | 9 cut(s) | 674, 985, 1340, 1404, 2133, 2230, 2331, 2376, 3128 |
| MbiI | CCGCTC | 1 cut(s) | 693 |
| MboI | GATC | 9 cut(s) | 672, 983, 1338, 1402, 2131, 2228, 2329, 2374, 3126 |
| MfeI | CAATTG | 1 cut(s) | 2223 |
| MflI | RGATCY | 3 cut(s) | 672, 983, 1402 |
| MhlI | GDGCHC | 4 cut(s) | 13, 282, 1268, 1381 |
| MluI | ACGCGT | 1 cut(s) | 396 |
| Mly113I | GGCGCC | 1 cut(s) | 92 |
| MlyI | GAGTC | 5 cut(s) | 152, 358, 537, 1526, 2522 |
| MmeI | TCCRAC | 5 cut(s) | 567, 605, 741, 1963, 3097 |
| MroXI | GAANNNNTTC | 2 cut(s) | 769, 1166 |
| MseI | TTAA | 8 cut(s) | 290, 443, 722, 938, 1296, 1686, 1874, 2109 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2499 |
| MspA1I | CMGCKG | 4 cut(s) | 114, 491, 549, 1742 |
| MspCI | CTTAAG | 2 cut(s) | 937, 2108 |
| MspI | CCGG | 4 cut(s) | 129, 477, 920, 3077 |
| MspR9I | CCNGG | 5 cut(s) | 1700, 2741, 2973, 3072, 3077 |
| MunI | CAATTG | 1 cut(s) | 2223 |
| Mva1269I | GAATGC | 1 cut(s) | 2119 |
| MvaI | CCWGG | 4 cut(s) | 1700, 2741, 2973, 3072 |
| MvnI | CGCG | 4 cut(s) | 52, 74, 398, 1400 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 123, 143, 1182, 1889, 2862 |
| NarI | GGCGCC | 1 cut(s) | 92 |
| NciI | CCSGG | 1 cut(s) | 3077 |
| NdeI | CATATG | 1 cut(s) | 1255 |
| NdeII | GATC | 9 cut(s) | 672, 983, 1338, 1402, 2131, 2228, 2329, 2374, 3126 |
| NlaIV | GGNNCC | 6 cut(s) | 93, 481, 674, 985, 1267, 2541 |
| NmeAIII | GCCGAG | 1 cut(s) | 120 |
| NmuCI | GTSAC | 2 cut(s) | 2798, 2913 |
| NspI | RCATGY | 1 cut(s) | 1842 |
| NspV | TTCGAA | 1 cut(s) | 2026 |
| PciI | ACATGT | 1 cut(s) | 1838 |
| PciSI | GCTCTTC | 2 cut(s) | 775, 1756 |
| PctI | GAATGC | 1 cut(s) | 2119 |
| PdmI | GAANNNNTTC | 2 cut(s) | 769, 1166 |
| PfeI | GAWTC | 7 cut(s) | 85, 390, 645, 1191, 2779, 3101, 3120 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3116 |
| PkrI | GCNGC | 8 cut(s) | 76, 116, 224, 695, 1435, 1450, 1882, 2318 |
| PleI | GAGTC | 5 cut(s) | 152, 358, 537, 1526, 2522 |
| PluTI | GGCGCC | 1 cut(s) | 95 |
| PpsI | GAGTC | 5 cut(s) | 152, 358, 537, 1526, 2522 |
| PpuMI | RGGWCCY | 1 cut(s) | 263 |
| PscI | ACATGT | 1 cut(s) | 1838 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1317 |
| PshBI | ATTAAT | 1 cut(s) | 1874 |
| PsiI | TTATAA | 2 cut(s) | 1329, 2175 |
| Psp124BI | GAGCTC | 1 cut(s) | 282 |
| Psp5II | RGGWCCY | 1 cut(s) | 263 |
| Psp6I | CCWGG | 4 cut(s) | 1698, 2739, 2971, 3070 |
| PspGI | CCWGG | 4 cut(s) | 1698, 2739, 2971, 3070 |
| PspN4I | GGNNCC | 6 cut(s) | 93, 481, 674, 985, 1267, 2541 |
| PspPPI | RGGWCCY | 1 cut(s) | 263 |
| PstI | CTGCAG | 1 cut(s) | 1161 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1012 |
| PsuI | RGATCY | 3 cut(s) | 672, 983, 1402 |
| PvuII | CAGCTG | 2 cut(s) | 491, 1742 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2499 |
| SacI | GAGCTC | 1 cut(s) | 282 |
| SalI | GTCGAC | 1 cut(s) | 942 |
| SapI | GCTCTTC | 2 cut(s) | 775, 1756 |
| SaqAI | TTAA | 8 cut(s) | 290, 443, 722, 938, 1296, 1686, 1874, 2109 |
| SatI | GCNGC | 8 cut(s) | 75, 115, 223, 694, 1434, 1449, 1881, 2317 |
| Sau3AI | GATC | 9 cut(s) | 672, 983, 1338, 1402, 2131, 2228, 2329, 2374, 3126 |
| SchI | GAGTC | 5 cut(s) | 152, 358, 537, 1526, 2522 |
| ScrFI | CCNGG | 5 cut(s) | 1700, 2741, 2973, 3072, 3077 |
| SduI | GDGCHC | 4 cut(s) | 13, 282, 1268, 1381 |
| SfaNI | GCATC | 8 cut(s) | 37, 360, 1574, 2004, 2413, 2932, 2947, 3072 |
| SfcI | CTRYAG | 3 cut(s) | 196, 515, 1157 |
| SfoI | GGCGCC | 1 cut(s) | 93 |
| SfuI | TTCGAA | 1 cut(s) | 2026 |
| SinI | GGWCC | 6 cut(s) | 263, 285, 651, 911, 1409, 2539 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2499 |
| SmlI | CTYRAG | 4 cut(s) | 667, 937, 2108, 2702 |
| SmoI | CTYRAG | 4 cut(s) | 667, 937, 2108, 2702 |
| SspDI | GGCGCC | 1 cut(s) | 91 |
| SspMI | CTAG | 9 cut(s) | 314, 1094, 1322, 1508, 1595, 2297, 2456, 2708, 3045 |
| SstI | GAGCTC | 1 cut(s) | 282 |
| StyD4I | CCNGG | 5 cut(s) | 1698, 2739, 2971, 3070, 3075 |
| StyI | CCWWGG | 2 cut(s) | 313, 1855 |
| TaaI | ACNGT | 9 cut(s) | 197, 342, 705, 849, 1615, 1915, 2043, 2798, 2990 |
| TaiI | ACGT | 4 cut(s) | 977, 1684, 2079, 2805 |
| TatI | WGTACW | 5 cut(s) | 151, 506, 525, 1636, 2990 |
| TauI | GCSGC | 5 cut(s) | 77, 117, 225, 696, 1883 |
| TfiI | GAWTC | 7 cut(s) | 85, 390, 645, 1191, 2779, 3101, 3120 |
| Tru1I | TTAA | 8 cut(s) | 290, 443, 722, 938, 1296, 1686, 1874, 2109 |
| Tru9I | TTAA | 8 cut(s) | 290, 443, 722, 938, 1296, 1686, 1874, 2109 |
| TscAI | CASTG | 6 cut(s) | 154, 345, 380, 841, 1119, 1894 |
| TseFI | GTSAC | 2 cut(s) | 2798, 2913 |
| TseI | GCWGC | 3 cut(s) | 1433, 1448, 2316 |
| Tsp45I | GTSAC | 2 cut(s) | 2798, 2913 |
| TspDTI | ATGAA | 4 cut(s) | 772, 809, 1050, 2070 |
| TspGWI | ACGGA | 1 cut(s) | 452 |
| TspRI | CASTG | 6 cut(s) | 154, 345, 380, 841, 1119, 1894 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3116 |
| Vha464I | CTTAAG | 2 cut(s) | 937, 2108 |
| VpaK11BI | GGWCC | 6 cut(s) | 263, 285, 651, 911, 1409, 2539 |
| VspI | ATTAAT | 1 cut(s) | 1874 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1854, 2744 |
| XapI | RAATTY | 2 cut(s) | 358, 1465 |
| XbaI | TCTAGA | 1 cut(s) | 1321 |
| XceI | RCATGY | 1 cut(s) | 1842 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1276, 1862 |
| XmaJI | CCTAGG | 1 cut(s) | 313 |
| XmiI | GTMKAC | 2 cut(s) | 851, 943 |
| XmnI | GAANNNNTTC | 2 cut(s) | 769, 1166 |
| XspI | CTAG | 9 cut(s) | 314, 1094, 1322, 1508, 1595, 2297, 2456, 2708, 3045 |