RchiOBHm_Chr5g0073751
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
79786681 .. 79787605
925 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ34863

Sequence Viewer

Length: 645 bp
ATGAGTGGGTGCGTGAGCCCCCACTTGCCCCTCTCTGGGTCCGCCAGTGCCCACATGAGTACTCGGGTTGCAGGAACATTTGGGTATCTTGCACCGGAATATGCTATGCGTGGACACTTGACAGAGAAAACCGATGTGTTTGCCTATGGTGTTGTCATTCTAGAAATTGTCAGCGGTAGGCCAAATTCTGATCCAAGTTTGGAAAGCGATATGGTTTATCTTCTTGAATTGGCTTGGAACTTGCATGAAAACGAACGTGAAGTTGATCTAGTAGACTCTAGATTATCCGAATTCAATGAGGAAGAAGCAAGACGAATTATCAACATAGGACTTTTGTGCACTCAATCATCACCAATGCTACGACCACCTATGTCTCGCGTGATTGGAATGCTTGCAGGAGATATTGAAGTGACTCCTGCTATTTCAAAGCCCGGTTACTTGACAGACTGGAGATTTGATGATGTAACCAGCCAAACGAAATATGGGAGTACTGGCACCAGTCTAGGAACTGATATGTCAACTAGAGGAACTGACTTCAGCTTTTACCACTCATCGGCAAGTACAAGCGTGATGGGGGATGCAGGGCAATTACCTTCAAATGCCACTCTTCCCATACTCAATAATACTAATGGTGATGGTAGGTGA

Protein Analysis

214

Amino Acids

23.17

Weight (kDa)

4.77

Isoelectric Point (pI)

50.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 20 - 64 1.2e-06 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 25 - 128 8.2e-07 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 494
AccI GTMKAC 1 cut(s) 273
AccII CGCG 1 cut(s) 378
AciI CCGC 2 cut(s) 42, 174
AclWI GGATC 1 cut(s) 185
AcsI RAATTY 2 cut(s) 184, 290
AcuI CTGAAG 1 cut(s) 520
AfaI GTAC 3 cut(s) 61, 490, 562
AfiI CCNNNNNNNGG 3 cut(s) 35, 36, 553
AgsI TTSAA 5 cut(s) 227, 295, 407, 426, 597
AluBI AGCT 1 cut(s) 540
AluI AGCT 1 cut(s) 540
Alw21I GWGCWC 1 cut(s) 341
Alw26I GTCTC 1 cut(s) 378
Alw44I GTGCAC 1 cut(s) 337
AlwI GGATC 1 cut(s) 185
Ama87I CYCGRG 1 cut(s) 63
AoxI GGCC 1 cut(s) 179
ApaLI GTGCAC 1 cut(s) 337
ApoI RAATTY 2 cut(s) 184, 290
ArsI GACNNNNNNTTYG 2 cut(s) 437, 469
AspS9I GGNCC 1 cut(s) 39
AsuC2I CCSGG 1 cut(s) 432
AsuHPI GGTGA 2 cut(s) 342, 644
AvaI CYCGRG 1 cut(s) 63
AvaII GGWCC 1 cut(s) 39
BaeGI GKGCMC 2 cut(s) 52, 341
BanI GGYRCC 1 cut(s) 494
BanII GRGCYC 1 cut(s) 20
Bbv12I GWGCWC 1 cut(s) 341
BccI CCATC 2 cut(s) 565, 629
BcgI CGANNNNNNTGC 2 cut(s) 122, 156
BcnI CCSGG 1 cut(s) 432
BcoDI GTCTC 1 cut(s) 378
BfaI CTAG 5 cut(s) 161, 269, 279, 503, 522
BmcAI AGTACT 2 cut(s) 61, 490
Bme1390I CCNGG 1 cut(s) 432
Bme18I GGWCC 1 cut(s) 39
BmeT110I CYCGRG 1 cut(s) 63
BmgT120I GGNCC 1 cut(s) 39
BmiI GGNNCC 2 cut(s) 40, 496
BmrFI CCNGG 1 cut(s) 432
BmsI GCATC 1 cut(s) 568
BpmI CTGGAG 1 cut(s) 469
BpuMI CCSGG 1 cut(s) 432
BsaWI WCCGGW 1 cut(s) 94
Bsc4I CCNNNNNNNGG 3 cut(s) 35, 36, 553
Bse1I ACTGG 4 cut(s) 45, 452, 496, 498
BseGI GGATG 1 cut(s) 583
BseLI CCNNNNNNNGG 3 cut(s) 35, 36, 553
BseNI ACTGG 4 cut(s) 45, 452, 496, 498
BseSI GKGCMC 2 cut(s) 52, 341
Bsh1236I CGCG 1 cut(s) 378
BshFI GGCC 1 cut(s) 181
BshNI GGYRCC 1 cut(s) 494
BsiHKAI GWGCWC 1 cut(s) 341
BsiHKCI CYCGRG 1 cut(s) 63
BsiSI CCGG 2 cut(s) 95, 432
BslI CCNNNNNNNGG 3 cut(s) 35, 36, 553
BsmAI GTCTC 1 cut(s) 378
BsmI GAATGC 1 cut(s) 393
BsnI GGCC 1 cut(s) 181
BsoBI CYCGRG 1 cut(s) 63
Bsp1286I GDGCHC 3 cut(s) 20, 52, 341
Bsp143I GATC 2 cut(s) 190, 265
BspACI CCGC 2 cut(s) 42, 174
BspANI GGCC 1 cut(s) 181
BspFNI CGCG 1 cut(s) 378
BspLI GGNNCC 2 cut(s) 40, 496
BspPI GGATC 1 cut(s) 185
BspT107I GGYRCC 1 cut(s) 494
BsrI ACTGG 4 cut(s) 45, 452, 496, 498
BssMI GATC 2 cut(s) 190, 265
Bst6I CTCTTC 1 cut(s) 612
BstC8I GCNNGC 1 cut(s) 393
BstF5I GGATG 1 cut(s) 583
BstFNI CGCG 1 cut(s) 378
BstKTI GATC 2 cut(s) 193, 268
BstMAI GTCTC 1 cut(s) 378
BstMBI GATC 2 cut(s) 190, 265
BstSCI CCNGG 1 cut(s) 430
BstSLI GKGCMC 2 cut(s) 52, 341
BstUI CGCG 1 cut(s) 378
BsuRI GGCC 1 cut(s) 181
BtsCI GGATG 1 cut(s) 583
BtsIMutI CAGTG 1 cut(s) 52
Cac8I GCNNGC 1 cut(s) 393
Cfr13I GGNCC 1 cut(s) 39
Csp6I GTAC 3 cut(s) 60, 489, 561
CviAII CATG 2 cut(s) 55, 245
CviJI RGCY 6 cut(s) 18, 181, 233, 430, 471, 540
CviKI_1 RGCY 6 cut(s) 18, 181, 233, 430, 471, 540
CviQI GTAC 3 cut(s) 60, 489, 561
DpnI GATC 2 cut(s) 192, 267
DpnII GATC 2 cut(s) 190, 265
Eam1104I CTCTTC 1 cut(s) 612
EarI CTCTTC 1 cut(s) 612
EciI GGCGGA 1 cut(s) 31
Eco24I GRGCYC 1 cut(s) 20
Eco47I GGWCC 1 cut(s) 39
Eco57I CTGAAG 1 cut(s) 520
Eco88I CYCGRG 1 cut(s) 63
EcoRI GAATTC 1 cut(s) 290
EcoT38I GRGCYC 1 cut(s) 20
FaeI CATG 2 cut(s) 58, 248
FatI CATG 2 cut(s) 54, 244
FblI GTMKAC 1 cut(s) 273
FokI GGATG 1 cut(s) 590
FriOI GRGCYC 1 cut(s) 20
FspBI CTAG 5 cut(s) 161, 269, 279, 503, 522
GsuI CTGGAG 1 cut(s) 469
HaeIII GGCC 1 cut(s) 181
HapII CCGG 2 cut(s) 95, 432
Hin1II CATG 2 cut(s) 58, 248
HincII GTYRAC 1 cut(s) 519
HindII GTYRAC 1 cut(s) 519
HinfI GANTC 2 cut(s) 275, 412
HpaII CCGG 2 cut(s) 95, 432
HphI GGTGA 2 cut(s) 342, 644
Hpy166II GTNNAC 4 cut(s) 113, 274, 339, 519
Hpy188I TCNGA 2 cut(s) 190, 289
Hpy188III TCNNGA 3 cut(s) 161, 224, 279
Hpy8I GTNNAC 4 cut(s) 113, 274, 339, 519
HpyAV CCTTC 1 cut(s) 603
HpyCH4IV ACGT 1 cut(s) 256
HpyCH4V TGCA 6 cut(s) 71, 92, 244, 339, 395, 581
HpySE526I ACGT 1 cut(s) 256
Hsp92II CATG 2 cut(s) 58, 248
Kzo9I GATC 2 cut(s) 190, 265
LweI GCATC 1 cut(s) 568
MaeI CTAG 5 cut(s) 161, 269, 279, 503, 522
MaeII ACGT 1 cut(s) 256
MaeIII GTNAC 3 cut(s) 409, 434, 463
MalI GATC 2 cut(s) 192, 267
MboI GATC 2 cut(s) 190, 265
MboII GAAGA 3 cut(s) 212, 314, 599
MhlI GDGCHC 3 cut(s) 20, 52, 341
MluCI AATT 6 cut(s) 165, 184, 227, 290, 315, 587
MlyI GAGTC 2 cut(s) 269, 406
MnlI CCTC 3 cut(s) 41, 292, 518
MspA1I CMGCKG 1 cut(s) 174
MspI CCGG 2 cut(s) 95, 432
MspR9I CCNGG 1 cut(s) 432
Mva1269I GAATGC 1 cut(s) 393
MvnI CGCG 1 cut(s) 378
NciI CCSGG 1 cut(s) 432
NdeII GATC 2 cut(s) 190, 265
NlaIII CATG 2 cut(s) 58, 248
NlaIV GGNNCC 2 cut(s) 40, 496
NmuCI GTSAC 1 cut(s) 409
PctI GAATGC 1 cut(s) 393
PleI GAGTC 2 cut(s) 269, 406
PpsI GAGTC 2 cut(s) 269, 406
PspN4I GGNNCC 2 cut(s) 40, 496
PspPI GGNCC 1 cut(s) 39
RsaI GTAC 3 cut(s) 61, 490, 562
RsaNI GTAC 3 cut(s) 60, 489, 561
Sau3AI GATC 2 cut(s) 190, 265
Sau96I GGNCC 1 cut(s) 39
ScaI AGTACT 2 cut(s) 61, 490
SchI GAGTC 2 cut(s) 269, 406
ScrFI CCNGG 1 cut(s) 432
SduI GDGCHC 3 cut(s) 20, 52, 341
SetI ASST 5 cut(s) 259, 370, 542, 595, 644
SfaNI GCATC 1 cut(s) 568
SinI GGWCC 1 cut(s) 39
Sse9I AATT 6 cut(s) 165, 184, 227, 290, 315, 587
SsiI CCGC 2 cut(s) 42, 174
SspMI CTAG 5 cut(s) 161, 269, 279, 503, 522
StyD4I CCNGG 1 cut(s) 430
TaiI ACGT 1 cut(s) 259
TasI AATT 6 cut(s) 165, 184, 227, 290, 315, 587
TatI WGTACW 3 cut(s) 59, 488, 560
TscAI CASTG 1 cut(s) 52
TseFI GTSAC 1 cut(s) 409
Tsp45I GTSAC 1 cut(s) 409
TspDTI ATGAA 1 cut(s) 261
TspRI CASTG 1 cut(s) 52
VneI GTGCAC 1 cut(s) 337
VpaK11BI GGWCC 1 cut(s) 39
XapI RAATTY 2 cut(s) 184, 290
XbaI TCTAGA 2 cut(s) 160, 278
XcmI CCANNNNNNNNNTGG 1 cut(s) 479
XmiI GTMKAC 1 cut(s) 273
XspI CTAG 5 cut(s) 161, 269, 279, 503, 522
ZrmI AGTACT 2 cut(s) 61, 490
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.