MD15G1239500.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
19706176 .. 19707471
1296 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1239500.v1.1.491

Sequence Viewer

Length: 840 bp
ATGCCTTTTTGGGTCTATAAATTGAGCTTTGATATTGATTGGATGTCAAGAGGACTTGCTTACCTCCATGAGGAGTCAAGGCCAAGGATTGTACATCTAGATGTCAAAGCCATTAATATTTTGCTCGATGTAGAACTCCCCCCAAAAATATCAAATTTTGGATTGGCAAAGCTTTATGATGACGAGAAAACCCACATCAGCACCCGAGTTGCAGGGACAATGTCACATTTATACTTGCATGAAATTTTAATACACATCATGTTAATAATGCCACTAATGATCTCAAGAAACATTGTACAACCATTTGATTATCTTGCATTGCAGAGGCTATTTGTCACCAGAATCCCTAGCGGGAGACCAAACTCTGACAATAACTTAGATCCAGAAAAGATTTATCTTCTTGAATGGACATGGACTCTACATGAAAACGACCAAATTCTGGGGCTGGTGGATCCGAGATTGACAGAGTTTGACGAAACTGAAGCGACTAGACTGATAAGAACAGCTCTCCTGTGCACGCAGGCATCATCGATGACGAGGCCATCTATGTCACGCGTGGTGGCAATGCTCTCTAGAGATATTGACATAGGCATTGTCATGTCGAAGTCGAGCTATTTGACAGATTATGATTTTAAGGATGTAACGACATTGTCAATAGGTAGCTTTTTGATGAAGGATGATACCCCATCAACTGCATCCAAGCATAGTAATGACCGCCTCAACTATCAGCCCGAAGGCAACAATGCAAGTGGTGCTAACACCCCTGTGGTTGACCTTGCGCCTTCTCCAGTAAACATCACTCAATCACTGCTAGTTGGCGTTATTAGAGAAGGAAGGTGA

Protein Analysis

280

Amino Acids

31.68

Weight (kDa)

5.61

Isoelectric Point (pI)

48.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 15 - 74 5.4e-09 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 15 - 65 7.6e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 439
AccII CGCG 1 cut(s) 555
AciI CCGC 2 cut(s) 351, 715
AclWI GGATC 3 cut(s) 374, 446, 459
AcsI RAATTY 3 cut(s) 154, 243, 435
AcuI CTGAAG 1 cut(s) 501
AfaI GTAC 2 cut(s) 93, 297
AfiI CCNNNNNNNGG 2 cut(s) 70, 439
AflIII ACRYGT 1 cut(s) 553
AgsI TTSAA 1 cut(s) 404
AleI CACNNNNGTG 1 cut(s) 764
AluBI AGCT 5 cut(s) 27, 172, 506, 612, 663
AluI AGCT 5 cut(s) 27, 172, 506, 612, 663
Alw21I GWGCWC 1 cut(s) 518
Alw26I GTCTC 1 cut(s) 349
Alw44I GTGCAC 1 cut(s) 514
AlwI GGATC 3 cut(s) 374, 446, 459
Ama87I CYCGRG 1 cut(s) 204
AoxI GGCC 2 cut(s) 80, 539
ApaLI GTGCAC 1 cut(s) 514
ApoI RAATTY 3 cut(s) 154, 243, 435
AseI ATTAAT 1 cut(s) 114
AspLEI GCGC 1 cut(s) 781
AsuHPI GGTGA 1 cut(s) 328
AvaI CYCGRG 1 cut(s) 204
BaeGI GKGCMC 1 cut(s) 518
BamHI GGATCC 1 cut(s) 451
Bbv12I GWGCWC 1 cut(s) 518
BccI CCATC 2 cut(s) 550, 694
BcoDI GTCTC 1 cut(s) 349
BfaI CTAG 5 cut(s) 98, 348, 489, 573, 812
BmeT110I CYCGRG 1 cut(s) 204
BmiI GGNNCC 1 cut(s) 453
BmsI GCATC 2 cut(s) 533, 704
BpmI CTGGAG 1 cut(s) 771
BpuEI CTTGAG 1 cut(s) 268
Bsa29I ATCGAT 1 cut(s) 530
BsaI GGTCTC 1 cut(s) 349
BsaJI CCNNGG 1 cut(s) 83
Bsc4I CCNNNNNNNGG 2 cut(s) 70, 439
Bse1I ACTGG 1 cut(s) 788
Bse3DI GCAATG 2 cut(s) 317, 570
BseCI ATCGAT 1 cut(s) 530
BseDI CCNNGG 1 cut(s) 83
BseGI GGATG 4 cut(s) 48, 643, 682, 695
BseLI CCNNNNNNNGG 2 cut(s) 70, 439
BseMI GCAATG 2 cut(s) 317, 570
BseNI ACTGG 1 cut(s) 788
BseRI GAGGAG 1 cut(s) 86
BseSI GKGCMC 1 cut(s) 518
Bsh1236I CGCG 1 cut(s) 555
BshFI GGCC 2 cut(s) 82, 541
BshVI ATCGAT 1 cut(s) 530
BsiHKAI GWGCWC 1 cut(s) 518
BsiHKCI CYCGRG 1 cut(s) 204
BslFI GGGAC 1 cut(s) 229
BslI CCNNNNNNNGG 2 cut(s) 70, 439
BsmAI GTCTC 1 cut(s) 349
BsmFI GGGAC 1 cut(s) 229
BsnI GGCC 2 cut(s) 82, 541
Bso31I GGTCTC 1 cut(s) 349
BsoBI CYCGRG 1 cut(s) 204
Bsp1286I GDGCHC 1 cut(s) 518
Bsp1407I TGTACA 2 cut(s) 91, 295
Bsp143I GATC 3 cut(s) 279, 379, 451
BspACI CCGC 2 cut(s) 351, 715
BspANI GGCC 2 cut(s) 82, 541
BspDI ATCGAT 1 cut(s) 530
BspFNI CGCG 1 cut(s) 555
BspLI GGNNCC 1 cut(s) 453
BspPI GGATC 3 cut(s) 374, 446, 459
BspTNI GGTCTC 1 cut(s) 349
BsrDI GCAATG 2 cut(s) 317, 570
BsrGI TGTACA 2 cut(s) 91, 295
BsrI ACTGG 1 cut(s) 788
BssECI CCNNGG 1 cut(s) 83
BssMI GATC 3 cut(s) 279, 379, 451
BssT1I CCWWGG 1 cut(s) 83
BstAPI GCANNNNNTGC 1 cut(s) 752
BstAUI TGTACA 2 cut(s) 91, 295
BstC8I GCNNGC 2 cut(s) 518, 522
BstDEI CTNAG 1 cut(s) 376
BstENI CCTNNNNNAGG 1 cut(s) 68
BstF5I GGATG 4 cut(s) 48, 643, 682, 695
BstFNI CGCG 1 cut(s) 555
BstHHI GCGC 1 cut(s) 781
BstKTI GATC 3 cut(s) 282, 382, 454
BstMAI GTCTC 1 cut(s) 349
BstMBI GATC 3 cut(s) 279, 379, 451
BstMWI GCNNNNNNNGC 1 cut(s) 752
BstSLI GKGCMC 1 cut(s) 518
BstUI CGCG 1 cut(s) 555
BstX2I RGATCY 2 cut(s) 379, 451
BstYI RGATCY 2 cut(s) 379, 451
Bsu15I ATCGAT 1 cut(s) 530
BsuRI GGCC 2 cut(s) 82, 541
BsuTUI ATCGAT 1 cut(s) 530
BtsCI GGATG 4 cut(s) 48, 643, 682, 695
BtsI GCAGTG 1 cut(s) 806
BtsIMutI CAGTG 1 cut(s) 806
Cac8I GCNNGC 2 cut(s) 518, 522
CfoI GCGC 1 cut(s) 781
ClaI ATCGAT 1 cut(s) 530
Csp6I GTAC 2 cut(s) 92, 296
CspCI CAANNNNNGTGG 2 cut(s) 730, 765
CviAII CATG 6 cut(s) 68, 239, 259, 411, 422, 598
CviQI GTAC 2 cut(s) 92, 296
DdeI CTNAG 1 cut(s) 376
DpnI GATC 3 cut(s) 281, 381, 453
DpnII GATC 3 cut(s) 279, 379, 451
Eco130I CCWWGG 1 cut(s) 83
Eco31I GGTCTC 1 cut(s) 349
Eco57I CTGAAG 1 cut(s) 501
Eco88I CYCGRG 1 cut(s) 204
EcoNI CCTNNNNNAGG 1 cut(s) 68
EcoT14I CCWWGG 1 cut(s) 83
ErhI CCWWGG 1 cut(s) 83
FaeI CATG 6 cut(s) 71, 242, 262, 414, 425, 601
FaqI GGGAC 1 cut(s) 229
FatI CATG 6 cut(s) 67, 238, 258, 410, 421, 597
FauI CCCGC 1 cut(s) 344
FokI GGATG 4 cut(s) 55, 650, 682, 689
FspBI CTAG 5 cut(s) 98, 348, 489, 573, 812
GlaI GCGC 1 cut(s) 780
GsuI CTGGAG 1 cut(s) 771
HaeIII GGCC 2 cut(s) 82, 541
HhaI GCGC 1 cut(s) 781
Hin1II CATG 6 cut(s) 71, 242, 262, 414, 425, 601
Hin6I GCGC 1 cut(s) 779
HinP1I GCGC 1 cut(s) 779
HincII GTYRAC 1 cut(s) 772
HindII GTYRAC 1 cut(s) 772
HindIII AAGCTT 1 cut(s) 170
HinfI GANTC 3 cut(s) 74, 342, 415
HphI GGTGA 1 cut(s) 328
Hpy166II GTNNAC 3 cut(s) 516, 772, 793
Hpy188I TCNGA 2 cut(s) 367, 456
Hpy188III TCNNGA 6 cut(s) 48, 98, 285, 383, 401, 573
Hpy8I GTNNAC 3 cut(s) 516, 772, 793
HpyAV CCTTC 5 cut(s) 667, 728, 792, 824, 828
HpyCH4V TGCA 7 cut(s) 212, 238, 317, 322, 516, 695, 746
HpyF10VI GCNNNNNNNGC 1 cut(s) 752
HpyF3I CTNAG 1 cut(s) 376
Hsp92II CATG 6 cut(s) 71, 242, 262, 414, 425, 601
HspAI GCGC 1 cut(s) 779
Kzo9I GATC 3 cut(s) 279, 379, 451
LpnPI CCDG 9 cut(s) 198, 352, 396, 425, 431, 506, 524, 777, 801
LweI GCATC 2 cut(s) 533, 704
MaeI CTAG 5 cut(s) 98, 348, 489, 573, 812
MaeIII GTNAC 4 cut(s) 222, 334, 549, 640
MalI GATC 3 cut(s) 281, 381, 453
MboI GATC 3 cut(s) 279, 379, 451
MboII GAAGA 1 cut(s) 389
MflI RGATCY 2 cut(s) 379, 451
MhlI GDGCHC 1 cut(s) 518
MluCI AATT 4 cut(s) 20, 154, 243, 435
MluI ACGCGT 1 cut(s) 553
MlyI GAGTC 2 cut(s) 83, 409
MnlI CCTC 6 cut(s) 44, 64, 74, 318, 531, 728
MseI TTAA 4 cut(s) 114, 248, 263, 633
MslI CAYNNNNRTG 4 cut(s) 99, 596, 708, 764
MvnI CGCG 1 cut(s) 555
MwoI GCNNNNNNNGC 1 cut(s) 752
NdeII GATC 3 cut(s) 279, 379, 451
NlaIII CATG 6 cut(s) 71, 242, 262, 414, 425, 601
NlaIV GGNNCC 1 cut(s) 453
NmuCI GTSAC 3 cut(s) 222, 334, 549
OliI CACNNNNGTG 1 cut(s) 764
PfeI GAWTC 1 cut(s) 342
PflFI GACNNNGTC 2 cut(s) 220, 649
PflMI CCANNNNNTGG 1 cut(s) 439
PleI GAGTC 2 cut(s) 82, 409
PpsI GAGTC 2 cut(s) 82, 409
PshBI ATTAAT 1 cut(s) 114
PspN4I GGNNCC 1 cut(s) 453
PsuI RGATCY 2 cut(s) 379, 451
PsyI GACNNNGTC 2 cut(s) 220, 649
RsaI GTAC 2 cut(s) 93, 297
RsaNI GTAC 2 cut(s) 92, 296
RseI CAYNNNNRTG 4 cut(s) 99, 596, 708, 764
SaqAI TTAA 4 cut(s) 114, 248, 263, 633
Sau3AI GATC 3 cut(s) 279, 379, 451
SchI GAGTC 2 cut(s) 83, 409
SduI GDGCHC 1 cut(s) 518
SetI ASST 9 cut(s) 29, 66, 174, 508, 614, 661, 665, 777, 839
SfaNI GCATC 2 cut(s) 533, 704
SmiMI CAYNNNNRTG 4 cut(s) 99, 596, 708, 764
SmlI CTYRAG 1 cut(s) 283
SmoI CTYRAG 1 cut(s) 283
Sse9I AATT 4 cut(s) 20, 154, 243, 435
SsiI CCGC 2 cut(s) 351, 715
SspI AATATT 1 cut(s) 118
SspMI CTAG 5 cut(s) 98, 348, 489, 573, 812
StyI CCWWGG 1 cut(s) 83
TaqI TCGA 4 cut(s) 126, 530, 602, 608
TasI AATT 4 cut(s) 20, 154, 243, 435
TatI WGTACW 2 cut(s) 91, 295
TfiI GAWTC 1 cut(s) 342
Tru1I TTAA 4 cut(s) 114, 248, 263, 633
Tru9I TTAA 4 cut(s) 114, 248, 263, 633
TscAI CASTG 1 cut(s) 813
TseFI GTSAC 3 cut(s) 222, 334, 549
Tsp45I GTSAC 3 cut(s) 222, 334, 549
TspDTI ATGAA 3 cut(s) 255, 438, 686
TspRI CASTG 1 cut(s) 813
Tth111I GACNNNGTC 2 cut(s) 220, 649
Van91I CCANNNNNTGG 1 cut(s) 439
VneI GTGCAC 1 cut(s) 514
VspI ATTAAT 1 cut(s) 114
XagI CCTNNNNNAGG 1 cut(s) 68
XapI RAATTY 3 cut(s) 154, 243, 435
XbaI TCTAGA 2 cut(s) 97, 572
XspI CTAG 5 cut(s) 98, 348, 489, 573, 812
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.