RchiOBHm_Chr2g0114861
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
26733785 .. 26737138
3354 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48807

Sequence Viewer

Length: 1044 bp
ATGTCAGGGGGTGCCTCCTTATCAGTTTTGGTCTTATTTTTGTGCATCTCTGGTAGAGCACAAGCTCAAGTTTCTGCTCCTGCTCCTCAACCTCAAGTTACTAATGCCACCACTGACCCATCTCAAGCGAGAGCTTTGAATTCAGTATTTGAGAAATGGAAGATTCGGGCCAATCCGGAGCAATGGAACACAACCGGAGACCCATGCACTGGAGCTGCCATAAACGCCACCAAATTTGATGACACCGATTACAACCCCTTAATCATATGTGACTGCTCTTATCAATCCAGCACCATTTGCCACATTACCCAACTGAAAGTTTATGACTTGAAAGTTGTTGGTGTAATTCCAGACGAGTTATGGAGTTTGACTTCTCTCACCAATCTGAATTTGGCACTGAATTACTTGACAGGACCTCTCTCTGCAGCCATTGCAAATCTAACTGGCTTGCAATACTTTACTGTTGGCATCAACGATTTATCAGGCGAGCTACCTAAAGAACTTGGACAACTTACTGAACTGAGATCATTGGCTTTTGGAGGAAACAACTTTTCGGGTTCTCTGCCATCTGAGCTAGGGAATTTATTCAATTTACAACAGCTTTACATTGATAGTTCGGGAGTTAGCGGTGAGATTCCACCAACATTTGCTAATCTACAAAACTTGGAGTTTTTTTGGGCTAGAAATGTTGAACTCTCTGGCAGGATACCAGACTTCATTGGGAATTGGTCAAAGCTTACTTCCTTGAGGTTTCAAGGAAACTCTTTTGAAGGTCCTATACCATTTGCATTTTCCAATCTGACTTCTATGCAAGAGCTACGCATTAGTGATTTGTCGAATGCCAATGGGAGCTCTTCTCTTGCGTTTATTGAGAATATGAAGGCTCTAAATATCTTAGAGCTGAGGAATAACAATATTTCTGATTCAATTCCTTCCGATTTTGGAGTATACCAAAGTTTGTCTCAGCTGGATTTGAGCTTCAACAATTTAACTGGACAGATACCAGACTCACTTTTTAATTTGAGTTCTCTCTCCATCTTGTAA

Protein Analysis

347

Amino Acids

37.61

Weight (kDa)

4.43

Isoelectric Point (pI)

36.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 166 - 250 1.6e-08 Leucine-rich repeat region
LRR_14 PF23598 265 - 347 3.4e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 11
AccB7I CCANNNNNTGG 1 cut(s) 209
AccI GTMKAC 1 cut(s) 948
AccIII TCCGGA 1 cut(s) 175
AciI CCGC 1 cut(s) 627
AcsI RAATTY 4 cut(s) 139, 233, 388, 580
AfiI CCNNNNNNNGG 1 cut(s) 209
AgsI TTSAA 8 cut(s) 139, 331, 589, 692, 755, 770, 927, 982
Alw21I GWGCWC 2 cut(s) 61, 854
Alw26I GTCTC 2 cut(s) 192, 966
Aor13HI TCCGGA 1 cut(s) 175
AoxI GGCC 1 cut(s) 168
ApeKI GCWGC 2 cut(s) 215, 425
ApoI RAATTY 4 cut(s) 139, 233, 388, 580
Asp700I GAANNNNTTC 1 cut(s) 584
AspS9I GGNCC 3 cut(s) 168, 413, 773
AsuHPI GGTGA 2 cut(s) 370, 641
AvaII GGWCC 2 cut(s) 413, 773
BanI GGYRCC 1 cut(s) 11
BanII GRGCYC 1 cut(s) 854
BarI GAAGNNNNNNTAC 2 cut(s) 762, 794
Bbv12I GWGCWC 2 cut(s) 61, 854
BbvCI CCTCAGC 1 cut(s) 902
BbvI GCAGC 2 cut(s) 202, 437
BccI CCATC 3 cut(s) 127, 574, 1043
BciVI GTATCC 1 cut(s) 699
BcoDI GTCTC 2 cut(s) 192, 966
BfaI CTAG 2 cut(s) 575, 681
BfmI CTRYAG 1 cut(s) 423
BfuI GTATCC 1 cut(s) 699
BisI GCNGC 2 cut(s) 216, 426
BlsI GCNGC 2 cut(s) 217, 427
Bme18I GGWCC 2 cut(s) 413, 773
BmgT120I GGNCC 3 cut(s) 168, 413, 773
BmiI GGNNCC 1 cut(s) 13
BmsI GCATC 2 cut(s) 54, 477
BplI GAGNNNNNCTC 2 cut(s) 841, 873
BpmI CTGGAG 1 cut(s) 231
Bpu10I CCTNAGC 1 cut(s) 902
BpuEI CTTGAG 4 cut(s) 51, 78, 108, 766
BsaI GGTCTC 1 cut(s) 192
BsaWI WCCGGW 2 cut(s) 175, 194
Bsc4I CCNNNNNNNGG 1 cut(s) 209
Bse1I ACTGG 3 cut(s) 214, 448, 997
Bse3DI GCAATG 2 cut(s) 188, 429
BseAI TCCGGA 1 cut(s) 175
BseLI CCNNNNNNNGG 1 cut(s) 209
BseMI GCAATG 2 cut(s) 188, 429
BseMII CTCAG 4 cut(s) 512, 561, 893, 977
BseNI ACTGG 3 cut(s) 214, 448, 997
BseRI GAGGAG 1 cut(s) 75
BseXI GCAGC 2 cut(s) 202, 437
BshFI GGCC 1 cut(s) 170
BshNI GGYRCC 1 cut(s) 11
BsiHKAI GWGCWC 2 cut(s) 61, 854
BsiSI CCGG 2 cut(s) 176, 195
BslI CCNNNNNNNGG 1 cut(s) 209
BsmAI GTCTC 2 cut(s) 192, 966
BsmI GAATGC 1 cut(s) 844
BsnI GGCC 1 cut(s) 170
Bso31I GGTCTC 1 cut(s) 192
Bsp1286I GDGCHC 2 cut(s) 61, 854
Bsp13I TCCGGA 1 cut(s) 175
Bsp143I GATC 1 cut(s) 524
BspACI CCGC 1 cut(s) 627
BspANI GGCC 1 cut(s) 170
BspCNI CTCAG 4 cut(s) 513, 562, 894, 976
BspEI TCCGGA 1 cut(s) 175
BspLI GGNNCC 1 cut(s) 13
BspMAI CTGCAG 1 cut(s) 427
BspQI GCTCTTC 1 cut(s) 859
BspT107I GGYRCC 1 cut(s) 11
BspTNI GGTCTC 1 cut(s) 192
BsrDI GCAATG 2 cut(s) 188, 429
BsrI ACTGG 3 cut(s) 214, 448, 997
BssMI GATC 1 cut(s) 524
BssNAI GTATAC 1 cut(s) 949
Bst1107I GTATAC 1 cut(s) 949
Bst4CI ACNGT 1 cut(s) 463
Bst6I CTCTTC 1 cut(s) 859
BstAPI GCANNNNNTGC 2 cut(s) 297, 431
BstC8I GCNNGC 2 cut(s) 449, 488
BstDEI CTNAG 5 cut(s) 521, 570, 895, 902, 963
BstKTI GATC 1 cut(s) 527
BstMAI GTCTC 2 cut(s) 192, 966
BstMBI GATC 1 cut(s) 524
BstMWI GCNNNNNNNGC 4 cut(s) 224, 297, 431, 571
BstSFI CTRYAG 1 cut(s) 423
BstV1I GCAGC 2 cut(s) 202, 437
BstZ17I GTATAC 1 cut(s) 949
BsuI GTATCC 1 cut(s) 699
BsuRI GGCC 1 cut(s) 170
BtsIMutI CAGTG 3 cut(s) 111, 207, 395
Cac8I GCNNGC 2 cut(s) 449, 488
Cfr13I GGNCC 3 cut(s) 168, 413, 773
CspCI CAANNNNNGTGG 2 cut(s) 217, 252
CviAII CATG 1 cut(s) 204
DdeI CTNAG 5 cut(s) 521, 570, 895, 902, 963
DpnI GATC 1 cut(s) 526
DpnII GATC 1 cut(s) 524
Eam1104I CTCTTC 1 cut(s) 859
EarI CTCTTC 1 cut(s) 859
Ecl136II GAGCTC 1 cut(s) 852
Eco24I GRGCYC 1 cut(s) 854
Eco31I GGTCTC 1 cut(s) 192
Eco47I GGWCC 2 cut(s) 413, 773
Eco53kI GAGCTC 1 cut(s) 852
EcoICRI GAGCTC 1 cut(s) 852
EcoO109I RGGNCCY 2 cut(s) 413, 773
EcoRI GAATTC 1 cut(s) 139
EcoT38I GRGCYC 1 cut(s) 854
FaeI CATG 1 cut(s) 207
FatI CATG 1 cut(s) 203
FauNDI CATATG 1 cut(s) 266
FblI GTMKAC 1 cut(s) 948
Fnu4HI GCNGC 2 cut(s) 216, 426
FriOI GRGCYC 1 cut(s) 854
Fsp4HI GCNGC 2 cut(s) 216, 426
FspBI CTAG 2 cut(s) 575, 681
GluI GCNGC 2 cut(s) 216, 426
GsuI CTGGAG 1 cut(s) 231
HaeIII GGCC 1 cut(s) 170
HapII CCGG 2 cut(s) 176, 195
Hin1II CATG 1 cut(s) 207
HindIII AAGCTT 1 cut(s) 734
HinfI GANTC 4 cut(s) 163, 634, 923, 1007
HpaII CCGG 2 cut(s) 176, 195
HphI GGTGA 2 cut(s) 370, 641
Hpy166II GTNNAC 1 cut(s) 949
Hpy188I TCNGA 5 cut(s) 387, 571, 801, 922, 937
Hpy188III TCNNGA 3 cut(s) 176, 350, 618
Hpy8I GTNNAC 1 cut(s) 949
HpyAV CCTTC 3 cut(s) 764, 874, 942
HpyCH4III ACNGT 1 cut(s) 463
HpyCH4V TGCA 7 cut(s) 45, 207, 425, 434, 451, 788, 811
HpyF10VI GCNNNNNNNGC 4 cut(s) 224, 297, 431, 571
HpyF3I CTNAG 5 cut(s) 521, 570, 895, 902, 963
Hsp92II CATG 1 cut(s) 207
Kpn2I TCCGGA 1 cut(s) 175
Kzo9I GATC 1 cut(s) 524
LguI GCTCTTC 1 cut(s) 859
LmnI GCTCC 5 cut(s) 82, 88, 178, 212, 849
Lsp1109I GCAGC 2 cut(s) 202, 437
LweI GCATC 2 cut(s) 54, 477
MaeI CTAG 2 cut(s) 575, 681
MaeIII GTNAC 2 cut(s) 97, 269
MalI GATC 1 cut(s) 526
MboI GATC 1 cut(s) 524
MboII GAAGA 2 cut(s) 172, 846
MhlI GDGCHC 2 cut(s) 61, 854
MlyI GAGTC 1 cut(s) 1001
MnlI CCTC 7 cut(s) 25, 96, 102, 426, 533, 741, 897
MroI TCCGGA 1 cut(s) 175
MroXI GAANNNNTTC 1 cut(s) 584
MseI TTAA 3 cut(s) 260, 989, 1017
MspA1I CMGCKG 1 cut(s) 967
MspI CCGG 2 cut(s) 176, 195
Mva1269I GAATGC 1 cut(s) 844
MwoI GCNNNNNNNGC 4 cut(s) 224, 297, 431, 571
NdeI CATATG 1 cut(s) 266
NdeII GATC 1 cut(s) 524
NlaIII CATG 1 cut(s) 207
NlaIV GGNNCC 1 cut(s) 13
NmuCI GTSAC 1 cut(s) 269
PciSI GCTCTTC 1 cut(s) 859
PctI GAATGC 1 cut(s) 844
PdmI GAANNNNTTC 1 cut(s) 584
PfeI GAWTC 3 cut(s) 163, 634, 923
PflMI CCANNNNNTGG 1 cut(s) 209
PkrI GCNGC 2 cut(s) 217, 427
PleI GAGTC 1 cut(s) 1001
PpsI GAGTC 1 cut(s) 1001
PpuMI RGGWCCY 2 cut(s) 413, 773
Psp124BI GAGCTC 1 cut(s) 854
Psp5II RGGWCCY 2 cut(s) 413, 773
PspN4I GGNNCC 1 cut(s) 13
PspPI GGNCC 3 cut(s) 168, 413, 773
PspPPI RGGWCCY 2 cut(s) 413, 773
PstI CTGCAG 1 cut(s) 427
PvuII CAGCTG 1 cut(s) 967
SacI GAGCTC 1 cut(s) 854
SapI GCTCTTC 1 cut(s) 859
SaqAI TTAA 3 cut(s) 260, 989, 1017
SatI GCNGC 2 cut(s) 216, 426
Sau3AI GATC 1 cut(s) 524
Sau96I GGNCC 3 cut(s) 168, 413, 773
SchI GAGTC 1 cut(s) 1001
SduI GDGCHC 2 cut(s) 61, 854
SfaNI GCATC 2 cut(s) 54, 477
SfcI CTRYAG 1 cut(s) 423
SinI GGWCC 2 cut(s) 413, 773
SmlI CTYRAG 4 cut(s) 66, 93, 123, 745
SmoI CTYRAG 4 cut(s) 66, 93, 123, 745
SsiI CCGC 1 cut(s) 627
SspI AATATT 1 cut(s) 916
SspMI CTAG 2 cut(s) 575, 681
SstI GAGCTC 1 cut(s) 854
TaaI ACNGT 1 cut(s) 463
TaqI TCGA 1 cut(s) 836
TfiI GAWTC 3 cut(s) 163, 634, 923
Tru1I TTAA 3 cut(s) 260, 989, 1017
Tru9I TTAA 3 cut(s) 260, 989, 1017
TscAI CASTG 3 cut(s) 118, 214, 402
TseFI GTSAC 1 cut(s) 269
TseI GCWGC 2 cut(s) 215, 425
Tsp45I GTSAC 1 cut(s) 269
TspDTI ATGAA 2 cut(s) 706, 893
TspRI CASTG 3 cut(s) 118, 214, 402
Van91I CCANNNNNTGG 1 cut(s) 209
VpaK11BI GGWCC 2 cut(s) 413, 773
XapI RAATTY 4 cut(s) 139, 233, 388, 580
XcmI CCANNNNNNNNNTGG 2 cut(s) 357, 388
XmiI GTMKAC 1 cut(s) 948
XmnI GAANNNNTTC 1 cut(s) 584
XspI CTAG 2 cut(s) 575, 681
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.