Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0000088

Physical Location & Seq

Genomic Coordinates Forward (+)

9605888 .. 9619331

Gene Structure 13444 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g15410.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3144 bp

ATGTCGAGACGTTCATCGTCATTGTCGTCTGTTCTGGTTATTTTCCGGTGTGCTGCTGCCATCTGCTGCTTCATCTTTGGCCTTACTGGTGTAACAGAAGCTCAGGCTCCTTCTCAAGCTCCTACATCTCAACCTCAAGCCACCACAGATCCGTCTGAAGCGAAAGCTTTGAATTCAATATTTGCACAATGGGGGATTGAGGCCAATACGGAGCAATGGAACACAACTGGAGACCCATGTAGTGGAGCTGCCATTGACTCCACCGCATTCGGCGATGACGATCACAACCCTTTCATCAAATGCGAATGCTCGGATAATGTCACTTGCCACATTACCCAACTGAAAGTTTATGCTTTGGATGTTGATGGTGTACTTCCAGATGAGCTATGGACATTGAGCTACCTATCTAATCTGAAATTGGGTCAGAATTACTTCACAGGACCTCTCTCTGCATCCATTGGAAATCTAACTAGCATGCAATACTTGGACTTCGGGATTAATGCTTTATCGGGAGAGCTACCAAAGGAACTCGGAGAACTCACTGAATTGATTGTATTTGCTATTGGGACAAACAACTTTACTGGTCCTCTGCCAGCTGAACTAGGGAGTTTATCAAAATTACAAGAACTTTATCTTGATAGTTCTGGACTTAGCGGTGAGATTCCATCTACATTTGCCAATCTACAAAGCTTGCAGAAACTTTGGGCATCAGATGTTGAACTCTCTGGCAGTATACCTGACTTCATAGGAAATTTGTCAAAGCTTACTGACTTGAGGTTTCAAGGAAACTCCTTTGAAGGTCCCATACCATCTGCACTTTCCAATCTGACTTCTCTCACTAATCTGATAATTACAGACATATCTACTACCAATGGAACCTCTTCTCTTGGATTTATTATGGATATGAAGTCTCTATCTGTCTTAGTGCTAAGAAATAACAACATTTCTGATTCAATTCCTTCCAACATTGGAGAATACAAAAGTTTATATCAGCTGGACTTGAGCTTCAACAATCTAACTGGACAAATACCAGACTCGCTGTTTAATTTGAGTTCTCTTTCCATCCTGTTTCTTGGAAACAATAAGTTGAATGGCACTATCCCTGAATCTAAAAGCTCAAGTCTTCTCAATATAGATTTGTCATACAATAATCTGGTTGGGAGCATTCCTTCTTGGGTCAAAGGAACAAACTTGCAGCTGAATTTTGTTGCCAACAACTTCACCCTGGACAGTTCAAACAGCAGTGCTCTTCCTTCAGGGTTGAATTGCCTTCAAAGAGACTTTCCTTGCAATAGTGGTTCTGGAATCTTTTCTAACTTTGGGATAAAATGTGGGGGTCCTGAGATAACATCTTCCAGTAAGATTGTGTATCAGACAGAAAATGAGACCCTTGGTCCAGCTACATATTTTGTGAATGATGAAAGCAGATGGGCAGTTAGCAACGTTGGGTATTTCACTGGCAGCAACAACCCTCAGTACACAATTTTCTCCTCATCTCAATTCACAAACACTCTAGATTCTGAGCTATTCCAGACTGCAAGGCTCTCTGCCTCATCACTTAGATATTATGGCTTGGGGCTTGAGAATGGTAACTACACGGTGAACCTACAGTTTGCAGAACAAGCTATCCTAGATTCTACTACATGGAAAAGTCTTGGGAGACGTGTGTTCAATATTTATATCCAGGGGAATCTCGTTCTAAAGGATTTTGACATACGAAAGGAGGCAAGGGGATCTTTCCTAGCTGTTCAGAAGGAATACACGGTTCCGGTTTCAGAGAACTACCTTGAAATCCATCTCTTTTGGGCTGGAAAGGGAACTTGTTGTGTACCTGCACAGGGTACTTATGGACCTATTGTTTCAGCCATCAGTGCTATATCAGATTTCGAACCTACTGTCAGTAACAAAACTCCAACTAGTAAGAAGAATAGGACTGGTCTGATTGTGGGAATTGTTGTTGGTGGTGGAGTTTTATTTCTGGTGATGGTAGTTCTCTACATTGTTCGAAGAAGAAAAAGGCCCAACTTCGATGATGTTGAAGAGCTGTTAGGGATTGATATTGGACCGCTCACTTTCAGTTATTCCGAACTAAAGTCGGCTACAAATGACTTTAGTCCGGAAAACAAGCTTGGAGAGGGAGGATTTGGACCTGTCTATAAAGGTACCCTTCACGATGGAAGAGTAATTGCCGTGAAGCAATTGTCTGCAGCATCCCACCAAGGAAAGAGCCAATTTGTAACTGAGATTGCCACTATATCTGCCGTGCAACACAATAACCTTGTGACTTTGTATGGGTTCTGTGCTGAGGGAGTAAAAAGGCTCCTTGTCTATGAGTATTTGGAAAACAATAGTCTTGATCAAGCATTGTTTGGAAAGAAAAATCTGAACCTTGATTGGTCAACACGATTTGACATATGCTTGGGAGTGGCTAGAGGTTTAACTTATCTTCATGAGGAATCAAGGCTTCGTATAGTTCATAGGGACGTGAAGGCCAGTAATATCCTGCTGGATTCTAATCTCATCCCCAAGATATCGGATTTTGGTTTGGCCAAGCTTTATGACAATAAAATGACCCACATAAGTACCGGGGTTGCTGGAACAATAGGGTATCTTGCACCGGAATATGCCATGCGTGGACACCTTACAGAAAAGACCGATGTGTTTGCATTCGGTGTTGTAGCTCTAGAAATTGTCAGTGGCAGGCCAAATTCTGACCCGAGTTTGGAAGAAGATAAGATGTATCTTCTGGAATGGGCTTGGAACTTGCATGAGAACAACCATGAACTTGAACTGGTGGACTATAGATTATCCGAATTCAGCGAGGAAGAAGCAAAACGAATAATGAAGATAGGACTTTTGTGCACTCAAACATCACCAATGCTGCGACCGACAATGTCTGGTGTTGTGGGAATGCTTACAGGAGCTATTGAAGTGACAACAGCTGTTTCAAAACCCGGTTACTTGACTGACTTGAAATTCATTGATGCTACTGCCAGCAACATATCACTTGGTATGTCAACCCAAGGAACTGATTCGAGCTTTTATAATTCATCTGCTAGTACAAGTATAGTAGGGGATGCGAGGCAAACACCTTCAAATGCCACTCATCCCATTCTTCACGATACTGTTAATGATGGCCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

1048

Amino Acids

113.82

Weight (kDa)

4.96

Isoelectric Point (pI)

35.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin	PF11721	440 - 623	2.8e-42	Malectin domain
Pkinase	PF00069	706 - 966	3.3e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	707 - 969	3.9e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000088)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca	FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica	MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica	Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis	pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis	RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata	RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora	Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii	Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa	Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha	Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana	Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	3045
Acc36I	ACCTGC	1 cut(s)	1840
Acc65I	GGTACC	1 cut(s)	2162
AccB1I	GGYRCC	1 cut(s)	2162
AccB7I	CCANNNNNTGG	1 cut(s)	242
AccBSI	CCGCTC	1 cut(s)	2068
AccI	GTMKAC	1 cut(s)	733
AccIII	TCCGGA	1 cut(s)	2116
AciI	CCGC	3 cut(s)	264, 654, 2066
AclI	AACGTT	1 cut(s)	1443
AclWI	GGATC	2 cut(s)	143, 1741
AcoI	YGGCCR	2 cut(s)	2547, 3136
AcsI	RAATTY	6 cut(s)	172, 751, 1201, 2707, 2813, 2975
AcuI	CTGAAG	2 cut(s)	177, 1239
AfaI	GTAC	7 cut(s)	372, 1478, 1830, 1843, 2164, 2584, 3061
AfiI	CCNNNNNNNGG	3 cut(s)	242, 1838, 2722
AflIII	ACRYGT	1 cut(s)	1663
AhdI	GACNNNNNGTC	1 cut(s)	1392
AhlI	ACTAGT	1 cut(s)	1916
AjiI	CACGTC	2 cut(s)	1664, 2485
AjnI	CCWGG	2 cut(s)	1224, 1683
AjuI	GAANNNNNNNTTGG	2 cut(s)	2112, 2144
AloI	GAACNNNNNNTCC	2 cut(s)	1611, 1643
Alw21I	GWGCWC	2 cut(s)	1249, 2864
Alw26I	GTCTC	5 cut(s)	225, 915, 1272, 1379, 1654
Alw44I	GTGCAC	1 cut(s)	2860
AlwI	GGATC	2 cut(s)	143, 1741
Ama87I	CYCGRG	1 cut(s)	2716
Aor13HI	TCCGGA	1 cut(s)	2116
AoxI	GGCC	7 cut(s)	79, 201, 2018, 2490, 2547, 2702, 3136
ApaLI	GTGCAC	1 cut(s)	2860
ApeKI	GCWGC	8 cut(s)	53, 56, 66, 248, 1195, 1461, 2207, 2881
ApoI	RAATTY	6 cut(s)	172, 751, 1201, 2707, 2813, 2975
ArsI	GACNNNNNNTTYG	2 cut(s)	1881, 1913
AseI	ATTAAT	1 cut(s)	498
Asp700I	GAANNNNTTC	4 cut(s)	431, 880, 1309, 3031
Asp718I	GGTACC	1 cut(s)	2162
AspS9I	GGNCC	9 cut(s)	440, 584, 800, 1337, 1394, 1850, 2019, 2063, 2147
AsuC2I	CCSGG	2 cut(s)	2587, 2955
AsuHPI	GGTGA	5 cut(s)	668, 1213, 1612, 1993, 2865
AsuII	TTCGAA	2 cut(s)	1887, 2005
AvaI	CYCGRG	1 cut(s)	2716
AvaII	GGWCC	8 cut(s)	440, 584, 800, 1337, 1394, 1850, 2063, 2147
BaeGI	GKGCMC	1 cut(s)	2864
BaeI	ACNNNNGTAYC	2 cut(s)	2566, 2599
BalI	TGGCCA	1 cut(s)	2549
BanI	GGYRCC	1 cut(s)	2162
BarI	GAAGNNNNNNTAC	2 cut(s)	789, 821
BbsI	GAAGAC	1 cut(s)	1115
Bbv12I	GWGCWC	2 cut(s)	1249, 2864
BbvCI	CCTCAGC	1 cut(s)	2304
BbvI	GCAGC	8 cut(s)	40, 43, 53, 235, 1207, 1473, 2219, 2868
BceAI	ACGGC	3 cut(s)	2174, 2246, 3123
BcgI	CGANNNNNNTGC	2 cut(s)	2645, 2679
BciT130I	CCWGG	2 cut(s)	1226, 1685
BclI	TGATCA	1 cut(s)	2356
BcnI	CCSGG	2 cut(s)	2587, 2955
BcoDI	GTCTC	5 cut(s)	225, 915, 1272, 1379, 1654
BcuI	ACTAGT	1 cut(s)	1916
BfaI	CTAG	9 cut(s)	471, 602, 1514, 1631, 1742, 1917, 2430, 2684, 3057
BfmI	CTRYAG	3 cut(s)	1607, 2205, 2800
BfuAI	ACCTGC	1 cut(s)	1840
BisI	GCNGC	8 cut(s)	54, 57, 67, 249, 1196, 1462, 2208, 2882
BlsI	GCNGC	8 cut(s)	55, 58, 68, 250, 1197, 1463, 2209, 2883
Bme1390I	CCNGG	4 cut(s)	1226, 1685, 2587, 2955
Bme18I	GGWCC	8 cut(s)	440, 584, 800, 1337, 1394, 1850, 2063, 2147
BmeRI	GACNNNNNGTC	1 cut(s)	1392
BmeT110I	CYCGRG	1 cut(s)	2716
BmgBI	CACGTC	2 cut(s)	1664, 2485
BmgT120I	GGNCC	9 cut(s)	440, 584, 800, 1337, 1394, 1850, 2019, 2063, 2147
BmiI	GGNNCC	7 cut(s)	108, 802, 877, 1338, 1767, 2164, 2321
BmrFI	CCNGG	4 cut(s)	1226, 1685, 2587, 2955
BmsI	GCATC	5 cut(s)	461, 716, 2219, 2974, 3067
BoxI	GACNNNNGTC	1 cut(s)	2112
BpiI	GAAGAC	1 cut(s)	1115
BpmI	CTGGAG	1 cut(s)	249
Bpu10I	CCTNAGC	2 cut(s)	102, 2304
Bpu14I	TTCGAA	2 cut(s)	1887, 2005
BpuEI	CTTGAG	6 cut(s)	99, 120, 793, 1021, 1102, 1601
BpuMI	CCSGG	2 cut(s)	2587, 2955
BsaBI	GATNNNNATC	2 cut(s)	279, 2514
BsaI	GGTCTC	2 cut(s)	225, 1379
BsaJI	CCNNGG	6 cut(s)	1224, 1390, 1684, 2218, 2586, 3022
BsaWI	WCCGGW	4 cut(s)	45, 1768, 2116, 2617
Bsc4I	CCNNNNNNNGG	3 cut(s)	242, 1838, 2722
Bse1I	ACTGG	9 cut(s)	91, 232, 586, 1024, 1356, 1462, 1939, 2493, 2796
Bse3DI	GCAATG	1 cut(s)	221
Bse8I	GATNNNNATC	2 cut(s)	279, 2514
BseAI	TCCGGA	1 cut(s)	2116
BseBI	CCWGG	2 cut(s)	1226, 1685
BseDI	CCNNGG	6 cut(s)	1224, 1390, 1684, 2218, 2586, 3022
BseGI	GGATG	7 cut(s)	364, 452, 1062, 2210, 2520, 3082, 3106
BseJI	GATNNNNATC	2 cut(s)	279, 2514
BseLI	CCNNNNNNNGG	3 cut(s)	242, 1838, 2722
BseMI	GCAATG	1 cut(s)	221
BseMII	CTCAG	6 cut(s)	116, 1332, 1487, 1512, 2232, 2295
BseNI	ACTGG	9 cut(s)	91, 232, 586, 1024, 1356, 1462, 1939, 2493, 2796
BseRI	GAGGAG	1 cut(s)	1480
BseSI	GKGCMC	1 cut(s)	2864
BseXI	GCAGC	8 cut(s)	40, 43, 53, 235, 1207, 1473, 2219, 2868
BsgI	GTGCAG	2 cut(s)	798, 1818
Bsh1285I	CGRYCG	1 cut(s)	2888
BshFI	GGCC	7 cut(s)	81, 203, 2020, 2492, 2549, 2704, 3138
BshNI	GGYRCC	1 cut(s)	2162
BsiEI	CGRYCG	1 cut(s)	2888
BsiHKAI	GWGCWC	2 cut(s)	1249, 2864
BsiHKCI	CYCGRG	1 cut(s)	2716
BsiSI	CCGG	6 cut(s)	46, 1769, 2117, 2586, 2618, 2955
BslFI	GGGAC	3 cut(s)	580, 786, 2495
BslI	CCNNNNNNNGG	3 cut(s)	242, 1838, 2722
BsmAI	GTCTC	5 cut(s)	225, 915, 1272, 1379, 1654
BsmBI	CGTCTC	1 cut(s)	1654
BsmFI	GGGAC	3 cut(s)	580, 786, 2495
BsmI	GAATGC	5 cut(s)	266, 311, 1164, 2666, 2916
BsnI	GGCC	7 cut(s)	81, 203, 2020, 2492, 2549, 2704, 3138
Bso31I	GGTCTC	2 cut(s)	225, 1379
BsoBI	CYCGRG	1 cut(s)	2716
Bsp119I	TTCGAA	2 cut(s)	1887, 2005
Bsp1286I	GDGCHC	2 cut(s)	1249, 2864
Bsp13I	TCCGGA	1 cut(s)	2116
Bsp143I	GATC	4 cut(s)	148, 280, 1733, 2356
BspACI	CCGC	3 cut(s)	264, 654, 2066
BspANI	GGCC	7 cut(s)	81, 203, 2020, 2492, 2549, 2704, 3138
BspCNI	CTCAG	6 cut(s)	115, 1333, 1486, 1513, 2233, 2296
BspEI	TCCGGA	1 cut(s)	2116
BspHI	TCATGA	1 cut(s)	2449
BspLI	GGNNCC	7 cut(s)	108, 802, 877, 1338, 1767, 2164, 2321
BspMAI	CTGCAG	1 cut(s)	2209
BspMI	ACCTGC	1 cut(s)	1840
BspPI	GGATC	2 cut(s)	143, 1741
BspQI	GCTCTTC	2 cut(s)	1254, 2034
BspT104I	TTCGAA	2 cut(s)	1887, 2005
BspT107I	GGYRCC	1 cut(s)	2162
BspTNI	GGTCTC	2 cut(s)	225, 1379
BsrBI	CCGCTC	1 cut(s)	2068
BsrDI	GCAATG	1 cut(s)	221
BsrI	ACTGG	9 cut(s)	91, 232, 586, 1024, 1356, 1462, 1939, 2493, 2796
BssECI	CCNNGG	6 cut(s)	1224, 1390, 1684, 2218, 2586, 3022
BssMI	GATC	4 cut(s)	148, 280, 1733, 2356
BssNAI	GTATAC	1 cut(s)	734
BssT1I	CCWWGG	3 cut(s)	1390, 2218, 3022
Bst1107I	GTATAC	1 cut(s)	734
Bst2UI	CCWGG	2 cut(s)	1226, 1685
Bst4CI	ACNGT	6 cut(s)	1232, 1600, 1611, 1765, 1897, 3127
Bst6I	CTCTTC	4 cut(s)	886, 1254, 2034, 2173
BstBI	TTCGAA	2 cut(s)	1887, 2005
BstC8I	GCNNGC	5 cut(s)	476, 594, 692, 2702, 2995
BstF5I	GGATG	7 cut(s)	364, 452, 1062, 2210, 2520, 3082, 3106
BstKTI	GATC	4 cut(s)	151, 283, 1736, 2359
BstMAI	GTCTC	5 cut(s)	225, 915, 1272, 1379, 1654
BstMBI	GATC	4 cut(s)	148, 280, 1733, 2356
BstMCI	CGRYCG	1 cut(s)	2888
BstMWI	GCNNNNNNNGC	2 cut(s)	1622, 1871
BstNI	CCWGG	2 cut(s)	1226, 1685
BstNSI	RCATGY	1 cut(s)	478
BstPAI	GACNNNNGTC	1 cut(s)	2112
BstSCI	CCNGG	4 cut(s)	1224, 1683, 2585, 2953
BstSFI	CTRYAG	3 cut(s)	1607, 2205, 2800
BstSLI	GKGCMC	1 cut(s)	2864
BstV1I	GCAGC	8 cut(s)	40, 43, 53, 235, 1207, 1473, 2219, 2868
BstV2I	GAAGAC	1 cut(s)	1115
BstX2I	RGATCY	2 cut(s)	148, 1733
BstYI	RGATCY	2 cut(s)	148, 1733
BstZ17I	GTATAC	1 cut(s)	734
BsuRI	GGCC	7 cut(s)	81, 203, 2020, 2492, 2549, 2704, 3138
BtgZI	GCGATG	1 cut(s)	288
BtrI	CACGTC	2 cut(s)	1664, 2485
BtsCI	GGATG	7 cut(s)	364, 452, 1062, 2210, 2520, 3082, 3106
BtsI	GCAGTG	1 cut(s)	1249
BtsIMutI	CAGTG	5 cut(s)	540, 1249, 1455, 1876, 2701
BveI	ACCTGC	1 cut(s)	1840
Cac8I	GCNNGC	5 cut(s)	476, 594, 692, 2702, 2995
CciI	TCATGA	1 cut(s)	2449
Cfr13I	GGNCC	9 cut(s)	440, 584, 800, 1337, 1394, 1850, 2019, 2063, 2147
Csp6I	GTAC	7 cut(s)	371, 1477, 1829, 1842, 2163, 2583, 3060
CviAII	CATG	7 cut(s)	237, 475, 1644, 2450, 2629, 2768, 2780
CviQI	GTAC	7 cut(s)	371, 1477, 1829, 1842, 2163, 2583, 3060
DpnI	GATC	4 cut(s)	150, 282, 1735, 2358
DpnII	GATC	4 cut(s)	148, 280, 1733, 2356
DriI	GACNNNNNGTC	1 cut(s)	1392
EaeI	YGGCCR	2 cut(s)	2547, 3136
Eam1104I	CTCTTC	4 cut(s)	886, 1254, 2034, 2173
Eam1105I	GACNNNNNGTC	1 cut(s)	1392
EarI	CTCTTC	4 cut(s)	886, 1254, 2034, 2173
Eco130I	CCWWGG	3 cut(s)	1390, 2218, 3022
Eco31I	GGTCTC	2 cut(s)	225, 1379
Eco32I	GATATC	1 cut(s)	2532
Eco47I	GGWCC	8 cut(s)	440, 584, 800, 1337, 1394, 1850, 2063, 2147
Eco57I	CTGAAG	2 cut(s)	177, 1239
Eco88I	CYCGRG	1 cut(s)	2716
EcoO109I	RGGNCCY	3 cut(s)	440, 800, 1337
EcoRI	GAATTC	2 cut(s)	172, 2813
EcoRII	CCWGG	2 cut(s)	1224, 1683
EcoRV	GATATC	1 cut(s)	2532
EcoT14I	CCWWGG	3 cut(s)	1390, 2218, 3022
ErhI	CCWWGG	3 cut(s)	1390, 2218, 3022
Esp3I	CGTCTC	1 cut(s)	1654
FaeI	CATG	7 cut(s)	240, 478, 1647, 2453, 2632, 2771, 2783
FalI	AAGNNNNNCTT	4 cut(s)	1720, 1752, 2151, 2183
FaqI	GGGAC	3 cut(s)	580, 786, 2495
FatI	CATG	7 cut(s)	236, 474, 1643, 2449, 2628, 2767, 2779
FauNDI	CATATG	1 cut(s)	2414
FbaI	TGATCA	1 cut(s)	2356
FblI	GTMKAC	1 cut(s)	733
Fnu4HI	GCNGC	8 cut(s)	54, 57, 67, 249, 1196, 1462, 2208, 2882
FokI	GGATG	7 cut(s)	371, 439, 1049, 2197, 2507, 3089, 3093
Fsp4HI	GCNGC	8 cut(s)	54, 57, 67, 249, 1196, 1462, 2208, 2882
FspBI	CTAG	9 cut(s)	471, 602, 1514, 1631, 1742, 1917, 2430, 2684, 3057
GluI	GCNGC	8 cut(s)	54, 57, 67, 249, 1196, 1462, 2208, 2882
GsuI	CTGGAG	1 cut(s)	249
HaeIII	GGCC	7 cut(s)	81, 203, 2020, 2492, 2549, 2704, 3138
HapII	CCGG	6 cut(s)	46, 1769, 2117, 2586, 2618, 2955
Hin1II	CATG	7 cut(s)	240, 478, 1647, 2453, 2632, 2771, 2783
HincII	GTYRAC	2 cut(s)	2400, 3018
HindII	GTYRAC	2 cut(s)	2400, 3018
HindIII	AAGCTT	5 cut(s)	165, 688, 761, 2126, 2552
HpaII	CCGG	6 cut(s)	46, 1769, 2117, 2586, 2618, 2955
HphI	GGTGA	5 cut(s)	668, 1213, 1612, 1993, 2865
HpyCH4III	ACNGT	6 cut(s)	1232, 1600, 1611, 1765, 1897, 3127
HpyCH4IV	ACGT	4 cut(s)	10, 1443, 1663, 2484
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1622, 1871
HpySE526I	ACGT	4 cut(s)	10, 1443, 1663, 2484
Hsp92II	CATG	7 cut(s)	240, 478, 1647, 2453, 2632, 2771, 2783
Kpn2I	TCCGGA	1 cut(s)	2116
KpnI	GGTACC	1 cut(s)	2166
Ksp22I	TGATCA	1 cut(s)	2356
Kzo9I	GATC	4 cut(s)	148, 280, 1733, 2356
LguI	GCTCTTC	2 cut(s)	1254, 2034
LmnI	GCTCC	7 cut(s)	112, 124, 211, 245, 1161, 2325, 2921
Lsp1109I	GCAGC	8 cut(s)	40, 43, 53, 235, 1207, 1473, 2219, 2868
LweI	GCATC	5 cut(s)	461, 716, 2219, 2974, 3067
MaeI	CTAG	9 cut(s)	471, 602, 1514, 1631, 1742, 1917, 2430, 2684, 3057
MaeII	ACGT	4 cut(s)	10, 1443, 1663, 2484
MaeIII	GTNAC	8 cut(s)	91, 319, 1589, 1901, 2236, 2281, 2932, 2957
MalI	GATC	4 cut(s)	150, 282, 1735, 2358
MbiI	CCGCTC	1 cut(s)	2068
MboI	GATC	4 cut(s)	148, 280, 1733, 2356
MfeI	CAATTG	1 cut(s)	2198
MflI	RGATCY	2 cut(s)	148, 1733
MhlI	GDGCHC	2 cut(s)	1249, 2864
MlsI	TGGCCA	1 cut(s)	2549
MluNI	TGGCCA	1 cut(s)	2549
MlyI	GAGTC	2 cut(s)	251, 1028
MmeI	TCCRAC	2 cut(s)	987, 1937
Mox20I	TGGCCA	1 cut(s)	2549
MroI	TCCGGA	1 cut(s)	2116
MroXI	GAANNNNTTC	4 cut(s)	431, 880, 1309, 3031
MscI	TGGCCA	1 cut(s)	2549
MseI	TTAA	4 cut(s)	498, 1044, 2438, 3129
Msp20I	TGGCCA	1 cut(s)	2549
MspA1I	CMGCKG	4 cut(s)	596, 994, 1198, 2942
MspI	CCGG	6 cut(s)	46, 1769, 2117, 2586, 2618, 2955
MspR9I	CCNGG	4 cut(s)	1226, 1685, 2587, 2955
MunI	CAATTG	1 cut(s)	2198
Mva1269I	GAATGC	5 cut(s)	266, 311, 1164, 2666, 2916
MvaI	CCWGG	2 cut(s)	1226, 1685
MwoI	GCNNNNNNNGC	2 cut(s)	1622, 1871
NciI	CCSGG	2 cut(s)	2587, 2955
NdeI	CATATG	1 cut(s)	2414
NdeII	GATC	4 cut(s)	148, 280, 1733, 2356
NlaIII	CATG	7 cut(s)	240, 478, 1647, 2453, 2632, 2771, 2783
NlaIV	GGNNCC	7 cut(s)	108, 802, 877, 1338, 1767, 2164, 2321
NmuCI	GTSAC	3 cut(s)	319, 2281, 2932
NspI	RCATGY	1 cut(s)	478
NspV	TTCGAA	2 cut(s)	1887, 2005
PaeI	GCATGC	1 cut(s)	478
PagI	TCATGA	1 cut(s)	2449
PciSI	GCTCTTC	2 cut(s)	1254, 2034
PcsI	WCGNNNNNNNCGW	2 cut(s)	23, 276
PctI	GAATGC	5 cut(s)	266, 311, 1164, 2666, 2916
PdmI	GAANNNNTTC	4 cut(s)	431, 880, 1309, 3031
PflFI	GACNNNGTC	1 cut(s)	2893
PflMI	CCANNNNNTGG	1 cut(s)	242
PkrI	GCNGC	8 cut(s)	55, 58, 68, 250, 1197, 1463, 2209, 2883
PleI	GAGTC	2 cut(s)	251, 1028
PpsI	GAGTC	2 cut(s)	251, 1028
PpuMI	RGGWCCY	3 cut(s)	440, 800, 1337
PshAI	GACNNNNGTC	1 cut(s)	2112
PshBI	ATTAAT	1 cut(s)	498
PsiI	TTATAA	1 cut(s)	3045
Psp1406I	AACGTT	1 cut(s)	1443
Psp5II	RGGWCCY	3 cut(s)	440, 800, 1337
Psp6I	CCWGG	2 cut(s)	1224, 1683
PspGI	CCWGG	2 cut(s)	1224, 1683
PspN4I	GGNNCC	7 cut(s)	108, 802, 877, 1338, 1767, 2164, 2321
PspPI	GGNCC	9 cut(s)	440, 584, 800, 1337, 1394, 1850, 2019, 2063, 2147
PspPPI	RGGWCCY	3 cut(s)	440, 800, 1337
PstI	CTGCAG	1 cut(s)	2209
PsuI	RGATCY	2 cut(s)	148, 1733
PsyI	GACNNNGTC	1 cut(s)	2893
PvuII	CAGCTG	4 cut(s)	596, 994, 1198, 2942
RsaI	GTAC	7 cut(s)	372, 1478, 1830, 1843, 2164, 2584, 3061
RsaNI	GTAC	7 cut(s)	371, 1477, 1829, 1842, 2163, 2583, 3060
SapI	GCTCTTC	2 cut(s)	1254, 2034
SaqAI	TTAA	4 cut(s)	498, 1044, 2438, 3129
SatI	GCNGC	8 cut(s)	54, 57, 67, 249, 1196, 1462, 2208, 2882
Sau3AI	GATC	4 cut(s)	148, 280, 1733, 2356
Sau96I	GGNCC	9 cut(s)	440, 584, 800, 1337, 1394, 1850, 2019, 2063, 2147
SchI	GAGTC	2 cut(s)	251, 1028
ScrFI	CCNGG	4 cut(s)	1226, 1685, 2587, 2955
SduI	GDGCHC	2 cut(s)	1249, 2864
SfaNI	GCATC	5 cut(s)	461, 716, 2219, 2974, 3067
SfcI	CTRYAG	3 cut(s)	1607, 2205, 2800
SfuI	TTCGAA	2 cut(s)	1887, 2005
SinI	GGWCC	8 cut(s)	440, 584, 800, 1337, 1394, 1850, 2063, 2147
SmlI	CTYRAG	6 cut(s)	114, 135, 772, 1000, 1117, 1580
SmoI	CTYRAG	6 cut(s)	114, 135, 772, 1000, 1117, 1580
SpeI	ACTAGT	1 cut(s)	1916
SphI	GCATGC	1 cut(s)	478
SsiI	CCGC	3 cut(s)	264, 654, 2066
SspI	AATATT	2 cut(s)	180, 1675
SspMI	CTAG	9 cut(s)	471, 602, 1514, 1631, 1742, 1917, 2430, 2684, 3057
StyD4I	CCNGG	4 cut(s)	1224, 1683, 2585, 2953
StyI	CCWWGG	3 cut(s)	1390, 2218, 3022
TaaI	ACNGT	6 cut(s)	1232, 1600, 1611, 1765, 1897, 3127
TaiI	ACGT	4 cut(s)	13, 1446, 1666, 2487
TaqI	TCGA	5 cut(s)	5, 1887, 2005, 2028, 3035
TaqII	GACCGA	2 cut(s)	2669, 2902
TatI	WGTACW	3 cut(s)	370, 1476, 3059
Tru1I	TTAA	4 cut(s)	498, 1044, 2438, 3129
Tru9I	TTAA	4 cut(s)	498, 1044, 2438, 3129
TscAI	CASTG	5 cut(s)	547, 1249, 1462, 1876, 2701
TseFI	GTSAC	3 cut(s)	319, 2281, 2932
TseI	GCWGC	8 cut(s)	53, 56, 66, 248, 1195, 1461, 2207, 2881
Tsp45I	GTSAC	3 cut(s)	319, 2281, 2932
TspGWI	ACGGA	2 cut(s)	141, 224
TspRI	CASTG	5 cut(s)	547, 1249, 1462, 1876, 2701
Tth111I	GACNNNGTC	1 cut(s)	2893
Van91I	CCANNNNNTGG	1 cut(s)	242
VneI	GTGCAC	1 cut(s)	2860
VpaK11BI	GGWCC	8 cut(s)	440, 584, 800, 1337, 1394, 1850, 2063, 2147
VspI	ATTAAT	1 cut(s)	498
XapI	RAATTY	6 cut(s)	172, 751, 1201, 2707, 2813, 2975
XbaI	TCTAGA	2 cut(s)	1513, 2683
XceI	RCATGY	1 cut(s)	478
XcmI	CCANNNNNNNNNTGG	1 cut(s)	384
XmiI	GTMKAC	1 cut(s)	733
XmnI	GAANNNNTTC	4 cut(s)	431, 880, 1309, 3031
XspI	CTAG	9 cut(s)	471, 602, 1514, 1631, 1742, 1917, 2430, 2684, 3057

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.