Belongs to the protein kinase superfamily
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2814 |
| Acc36I | ACCTGC | 1 cut(s) | 1609 |
| AccBSI | CCGCTC | 1 cut(s) | 1837 |
| AccI | GTMKAC | 1 cut(s) | 14 |
| AccII | CGCG | 1 cut(s) | 38 |
| AccIII | TCCGGA | 1 cut(s) | 1885 |
| AciI | CCGC | 5 cut(s) | 36, 86, 141, 531, 1835 |
| AclWI | GGATC | 2 cut(s) | 1510, 2795 |
| AcoI | YGGCCR | 1 cut(s) | 2316 |
| AcsI | RAATTY | 7 cut(s) | 49, 652, 1084, 1677, 2476, 2582, 2744 |
| AcuI | CTGAAG | 2 cut(s) | 352, 1122 |
| AfaI | GTAC | 8 cut(s) | 249, 640, 1599, 1612, 1933, 2353, 2686, 2830 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 119, 1607, 2491 |
| AflIII | ACRYGT | 2 cut(s) | 30, 1432 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1275 |
| AhlI | ACTAGT | 1 cut(s) | 1685 |
| AjiI | CACGTC | 3 cut(s) | 33, 1433, 2254 |
| AjnI | CCWGG | 2 cut(s) | 1107, 1452 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1881, 1913 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1380, 1412 |
| Alw21I | GWGCWC | 2 cut(s) | 1132, 2633 |
| Alw26I | GTCTC | 5 cut(s) | 102, 798, 1155, 1262, 1423 |
| Alw44I | GTGCAC | 1 cut(s) | 2629 |
| AlwI | GGATC | 2 cut(s) | 1510, 2795 |
| Aor13HI | TCCGGA | 1 cut(s) | 1885 |
| AoxI | GGCC | 6 cut(s) | 78, 461, 1787, 2259, 2316, 2471 |
| ApaLI | GTGCAC | 1 cut(s) | 2629 |
| ApeKI | GCWGC | 5 cut(s) | 125, 1078, 1976, 2650, 2711 |
| ApoI | RAATTY | 7 cut(s) | 49, 652, 1084, 1677, 2476, 2582, 2744 |
| AseI | ATTAAT | 1 cut(s) | 375 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 308, 763, 1192 |
| AspS9I | GGNCC | 9 cut(s) | 317, 461, 683, 1220, 1277, 1619, 1788, 1832, 1916 |
| AsuC2I | CCSGG | 2 cut(s) | 2356, 2724 |
| AsuHPI | GGTGA | 4 cut(s) | 545, 1096, 1762, 2634 |
| AsuII | TTCGAA | 1 cut(s) | 1774 |
| AvaII | GGWCC | 7 cut(s) | 317, 683, 1220, 1277, 1619, 1832, 1916 |
| BaeGI | GKGCMC | 1 cut(s) | 2633 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2335, 2368 |
| BalI | TGGCCA | 1 cut(s) | 2318 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 672, 704 |
| BbsI | GAAGAC | 1 cut(s) | 998 |
| Bbv12I | GWGCWC | 2 cut(s) | 1132, 2633 |
| BbvCI | CCTCAGC | 1 cut(s) | 2073 |
| BbvI | GCAGC | 5 cut(s) | 112, 1090, 1988, 2637, 2698 |
| BceAI | ACGGC | 2 cut(s) | 1943, 2015 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2414, 2448 |
| BciT130I | CCWGG | 2 cut(s) | 1109, 1454 |
| BcnI | CCSGG | 2 cut(s) | 2356, 2724 |
| BcoDI | GTCTC | 5 cut(s) | 102, 798, 1155, 1262, 1423 |
| BcuI | ACTAGT | 1 cut(s) | 1685 |
| BfmI | CTRYAG | 3 cut(s) | 1376, 1974, 2569 |
| BfuAI | ACCTGC | 1 cut(s) | 1609 |
| BisI | GCNGC | 5 cut(s) | 126, 1079, 1977, 2651, 2712 |
| BlsI | GCNGC | 5 cut(s) | 127, 1080, 1978, 2652, 2713 |
| BmcAI | AGTACT | 1 cut(s) | 640 |
| Bme1390I | CCNGG | 4 cut(s) | 1109, 1454, 2356, 2724 |
| Bme18I | GGWCC | 7 cut(s) | 317, 683, 1220, 1277, 1619, 1832, 1916 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1275 |
| BmgBI | CACGTC | 3 cut(s) | 33, 1433, 2254 |
| BmgT120I | GGNCC | 9 cut(s) | 317, 461, 683, 1220, 1277, 1619, 1788, 1832, 1916 |
| BmiI | GGNNCC | 3 cut(s) | 1221, 1536, 2090 |
| BmrFI | CCNGG | 4 cut(s) | 1109, 1454, 2356, 2724 |
| BmrI | ACTGGG | 1 cut(s) | 468 |
| BmsI | GCATC | 5 cut(s) | 338, 593, 1988, 2743, 2836 |
| BmuI | ACTGGG | 1 cut(s) | 468 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1881 |
| BpiI | GAAGAC | 1 cut(s) | 998 |
| BpmI | CTGGAG | 2 cut(s) | 126, 543 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2073 |
| Bpu14I | TTCGAA | 1 cut(s) | 1774 |
| BpuEI | CTTGAG | 3 cut(s) | 904, 985, 1370 |
| BpuMI | CCSGG | 2 cut(s) | 2356, 2724 |
| BsaI | GGTCTC | 2 cut(s) | 102, 1262 |
| BsaJI | CCNNGG | 8 cut(s) | 231, 1107, 1108, 1273, 1453, 1987, 2355, 2791 |
| BsaWI | WCCGGW | 3 cut(s) | 1537, 1885, 2386 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 26 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 119, 1607, 2491 |
| Bse1I | ACTGG | 7 cut(s) | 109, 463, 907, 1239, 1708, 2262, 2565 |
| Bse3DI | GCAATG | 1 cut(s) | 98 |
| BseAI | TCCGGA | 1 cut(s) | 1885 |
| BseBI | CCWGG | 2 cut(s) | 1109, 1454 |
| BseDI | CCNNGG | 8 cut(s) | 231, 1107, 1108, 1273, 1453, 1987, 2355, 2791 |
| BseGI | GGATG | 8 cut(s) | 18, 241, 329, 945, 1979, 2289, 2851, 2875 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 119, 1607, 2491 |
| BseMI | GCAATG | 1 cut(s) | 98 |
| BseMII | CTCAG | 5 cut(s) | 714, 887, 1238, 2001, 2064 |
| BseNI | ACTGG | 7 cut(s) | 109, 463, 907, 1239, 1708, 2262, 2565 |
| BseSI | GKGCMC | 1 cut(s) | 2633 |
| BseXI | GCAGC | 5 cut(s) | 112, 1090, 1988, 2637, 2698 |
| BsgI | GTGCAG | 2 cut(s) | 681, 1587 |
| Bsh1236I | CGCG | 1 cut(s) | 38 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2657 |
| BshFI | GGCC | 6 cut(s) | 80, 463, 1789, 2261, 2318, 2473 |
| BsiEI | CGRYCG | 1 cut(s) | 2657 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1132, 2633 |
| BsiSI | CCGG | 5 cut(s) | 1538, 1886, 2355, 2387, 2724 |
| BslFI | GGGAC | 2 cut(s) | 457, 2264 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 119, 1607, 2491 |
| BsmAI | GTCTC | 5 cut(s) | 102, 798, 1155, 1262, 1423 |
| BsmBI | CGTCTC | 1 cut(s) | 1423 |
| BsmFI | GGGAC | 2 cut(s) | 457, 2264 |
| BsmI | GAATGC | 3 cut(s) | 143, 1047, 2435 |
| BsnI | GGCC | 6 cut(s) | 80, 463, 1789, 2261, 2318, 2473 |
| Bso31I | GGTCTC | 2 cut(s) | 102, 1262 |
| Bsp119I | TTCGAA | 1 cut(s) | 1774 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1132, 2633 |
| Bsp13I | TCCGGA | 1 cut(s) | 1885 |
| Bsp143I | GATC | 3 cut(s) | 1502, 2125, 2800 |
| BspACI | CCGC | 5 cut(s) | 36, 86, 141, 531, 1835 |
| BspANI | GGCC | 6 cut(s) | 80, 463, 1789, 2261, 2318, 2473 |
| BspCNI | CTCAG | 5 cut(s) | 715, 886, 1237, 2002, 2065 |
| BspEI | TCCGGA | 1 cut(s) | 1885 |
| BspFNI | CGCG | 1 cut(s) | 38 |
| BspHI | TCATGA | 1 cut(s) | 2218 |
| BspLI | GGNNCC | 3 cut(s) | 1221, 1536, 2090 |
| BspMAI | CTGCAG | 1 cut(s) | 1978 |
| BspMI | ACCTGC | 1 cut(s) | 1609 |
| BspPI | GGATC | 2 cut(s) | 1510, 2795 |
| BspQI | GCTCTTC | 3 cut(s) | 769, 1137, 1803 |
| BspT104I | TTCGAA | 1 cut(s) | 1774 |
| BspTNI | GGTCTC | 2 cut(s) | 102, 1262 |
| BsrBI | CCGCTC | 1 cut(s) | 1837 |
| BsrDI | GCAATG | 1 cut(s) | 98 |
| BsrI | ACTGG | 7 cut(s) | 109, 463, 907, 1239, 1708, 2262, 2565 |
| BssECI | CCNNGG | 8 cut(s) | 231, 1107, 1108, 1273, 1453, 1987, 2355, 2791 |
| BssMI | GATC | 3 cut(s) | 1502, 2125, 2800 |
| BssT1I | CCWWGG | 4 cut(s) | 231, 1273, 1987, 2791 |
| Bst2UI | CCWGG | 2 cut(s) | 1109, 1454 |
| Bst4CI | ACNGT | 6 cut(s) | 577, 1369, 1380, 1534, 1666, 2896 |
| Bst6I | CTCTTC | 5 cut(s) | 769, 1137, 1803, 1941, 1942 |
| BstBI | TTCGAA | 1 cut(s) | 1774 |
| BstC8I | GCNNGC | 5 cut(s) | 353, 471, 569, 2471, 2764 |
| BstDEI | CTNAG | 7 cut(s) | 723, 805, 812, 873, 1224, 2010, 2073 |
| BstF5I | GGATG | 8 cut(s) | 18, 241, 329, 945, 1979, 2289, 2851, 2875 |
| BstFNI | CGCG | 1 cut(s) | 38 |
| BstKTI | GATC | 3 cut(s) | 1505, 2128, 2803 |
| BstMAI | GTCTC | 5 cut(s) | 102, 798, 1155, 1262, 1423 |
| BstMBI | GATC | 3 cut(s) | 1502, 2125, 2800 |
| BstMCI | CGRYCG | 1 cut(s) | 2657 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1391, 1640 |
| BstNI | CCWGG | 2 cut(s) | 1109, 1454 |
| BstNSI | RCATGY | 1 cut(s) | 355 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1881 |
| BstSCI | CCNGG | 4 cut(s) | 1107, 1452, 2354, 2722 |
| BstSFI | CTRYAG | 3 cut(s) | 1376, 1974, 2569 |
| BstSLI | GKGCMC | 1 cut(s) | 2633 |
| BstUI | CGCG | 1 cut(s) | 38 |
| BstV1I | GCAGC | 5 cut(s) | 112, 1090, 1988, 2637, 2698 |
| BstV2I | GAAGAC | 1 cut(s) | 998 |
| BstX2I | RGATCY | 1 cut(s) | 1502 |
| BstYI | RGATCY | 1 cut(s) | 1502 |
| BsuRI | GGCC | 6 cut(s) | 80, 463, 1789, 2261, 2318, 2473 |
| BtrI | CACGTC | 3 cut(s) | 33, 1433, 2254 |
| BtsCI | GGATG | 8 cut(s) | 18, 241, 329, 945, 1979, 2289, 2851, 2875 |
| BtsI | GCAGTG | 1 cut(s) | 1132 |
| BtsIMutI | CAGTG | 6 cut(s) | 417, 720, 1132, 1374, 1645, 2470 |
| BveI | ACCTGC | 1 cut(s) | 1609 |
| Cac8I | GCNNGC | 5 cut(s) | 353, 471, 569, 2471, 2764 |
| CciI | TCATGA | 1 cut(s) | 2218 |
| Cfr13I | GGNCC | 9 cut(s) | 317, 461, 683, 1220, 1277, 1619, 1788, 1832, 1916 |
| CseI | GACGC | 1 cut(s) | 169 |
| Csp6I | GTAC | 8 cut(s) | 248, 639, 1598, 1611, 1932, 2352, 2685, 2829 |
| CviAII | CATG | 6 cut(s) | 352, 1413, 2219, 2398, 2537, 2549 |
| CviQI | GTAC | 8 cut(s) | 248, 639, 1598, 1611, 1932, 2352, 2685, 2829 |
| DdeI | CTNAG | 7 cut(s) | 723, 805, 812, 873, 1224, 2010, 2073 |
| DpnI | GATC | 3 cut(s) | 1504, 2127, 2802 |
| DpnII | GATC | 3 cut(s) | 1502, 2125, 2800 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1275 |
| EaeI | YGGCCR | 1 cut(s) | 2316 |
| Eam1104I | CTCTTC | 5 cut(s) | 769, 1137, 1803, 1941, 1942 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1275 |
| EarI | CTCTTC | 5 cut(s) | 769, 1137, 1803, 1941, 1942 |
| Eco130I | CCWWGG | 4 cut(s) | 231, 1273, 1987, 2791 |
| Eco31I | GGTCTC | 2 cut(s) | 102, 1262 |
| Eco32I | GATATC | 1 cut(s) | 2301 |
| Eco47I | GGWCC | 7 cut(s) | 317, 683, 1220, 1277, 1619, 1832, 1916 |
| Eco57I | CTGAAG | 2 cut(s) | 352, 1122 |
| EcoO109I | RGGNCCY | 3 cut(s) | 317, 683, 1220 |
| EcoRI | GAATTC | 2 cut(s) | 49, 2582 |
| EcoRII | CCWGG | 2 cut(s) | 1107, 1452 |
| EcoRV | GATATC | 1 cut(s) | 2301 |
| EcoT14I | CCWWGG | 4 cut(s) | 231, 1273, 1987, 2791 |
| ErhI | CCWWGG | 4 cut(s) | 231, 1273, 1987, 2791 |
| Esp3I | CGTCTC | 1 cut(s) | 1423 |
| FaeI | CATG | 6 cut(s) | 355, 1416, 2222, 2401, 2540, 2552 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1920, 1952 |
| FaqI | GGGAC | 2 cut(s) | 457, 2264 |
| FatI | CATG | 6 cut(s) | 351, 1412, 2218, 2397, 2536, 2548 |
| FauNDI | CATATG | 1 cut(s) | 2183 |
| FblI | GTMKAC | 1 cut(s) | 14 |
| Fnu4HI | GCNGC | 5 cut(s) | 126, 1079, 1977, 2651, 2712 |
| FokI | GGATG | 8 cut(s) | 5, 248, 316, 932, 1966, 2276, 2858, 2862 |
| Fsp4HI | GCNGC | 5 cut(s) | 126, 1079, 1977, 2651, 2712 |
| GluI | GCNGC | 5 cut(s) | 126, 1079, 1977, 2651, 2712 |
| GsuI | CTGGAG | 2 cut(s) | 126, 543 |
| HaeIII | GGCC | 6 cut(s) | 80, 463, 1789, 2261, 2318, 2473 |
| HapII | CCGG | 5 cut(s) | 1538, 1886, 2355, 2387, 2724 |
| HgaI | GACGC | 1 cut(s) | 169 |
| Hin1II | CATG | 6 cut(s) | 355, 1416, 2222, 2401, 2540, 2552 |
| HincII | GTYRAC | 4 cut(s) | 15, 1063, 2169, 2787 |
| HindII | GTYRAC | 4 cut(s) | 15, 1063, 2169, 2787 |
| HindIII | AAGCTT | 5 cut(s) | 42, 565, 607, 1895, 2321 |
| HpaII | CCGG | 5 cut(s) | 1538, 1886, 2355, 2387, 2724 |
| HphI | GGTGA | 4 cut(s) | 545, 1096, 1762, 2634 |
| Hpy99I | CGWCG | 1 cut(s) | 152 |
| HpyAV | CCTTC | 8 cut(s) | 674, 852, 1062, 1146, 1163, 1516, 2251, 2871 |
| HpyCH4III | ACNGT | 6 cut(s) | 577, 1369, 1380, 1534, 1666, 2896 |
| HpyCH4IV | ACGT | 3 cut(s) | 32, 1432, 2253 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1391, 1640 |
| HpyF3I | CTNAG | 7 cut(s) | 723, 805, 812, 873, 1224, 2010, 2073 |
| HpySE526I | ACGT | 3 cut(s) | 32, 1432, 2253 |
| Hsp92II | CATG | 6 cut(s) | 355, 1416, 2222, 2401, 2540, 2552 |
| Kpn2I | TCCGGA | 1 cut(s) | 1885 |
| Kzo9I | GATC | 3 cut(s) | 1502, 2125, 2800 |
| LguI | GCTCTTC | 3 cut(s) | 769, 1137, 1803 |
| LmnI | GCTCC | 4 cut(s) | 88, 122, 2094, 2690 |
| Lsp1109I | GCAGC | 5 cut(s) | 112, 1090, 1988, 2637, 2698 |
| LweI | GCATC | 5 cut(s) | 338, 593, 1988, 2743, 2836 |
| MaeII | ACGT | 3 cut(s) | 32, 1432, 2253 |
| MaeIII | GTNAC | 7 cut(s) | 196, 1241, 1358, 2005, 2050, 2701, 2726 |
| MalI | GATC | 3 cut(s) | 1504, 2127, 2802 |
| MbiI | CCGCTC | 1 cut(s) | 1837 |
| MboI | GATC | 3 cut(s) | 1502, 2125, 2800 |
| MfeI | CAATTG | 1 cut(s) | 1967 |
| MflI | RGATCY | 1 cut(s) | 1502 |
| MhlI | GDGCHC | 2 cut(s) | 1132, 2633 |
| MlsI | TGGCCA | 1 cut(s) | 2318 |
| MluNI | TGGCCA | 1 cut(s) | 2318 |
| MlyI | GAGTC | 3 cut(s) | 128, 911, 2273 |
| MmeI | TCCRAC | 3 cut(s) | 870, 1706, 2656 |
| Mox20I | TGGCCA | 1 cut(s) | 2318 |
| MroI | TCCGGA | 1 cut(s) | 1885 |
| MroXI | GAANNNNTTC | 3 cut(s) | 308, 763, 1192 |
| MscI | TGGCCA | 1 cut(s) | 2318 |
| MseI | TTAA | 6 cut(s) | 375, 869, 927, 1742, 2207, 2898 |
| Msp20I | TGGCCA | 1 cut(s) | 2318 |
| MspA1I | CMGCKG | 4 cut(s) | 473, 877, 1081, 2711 |
| MspI | CCGG | 5 cut(s) | 1538, 1886, 2355, 2387, 2724 |
| MspR9I | CCNGG | 4 cut(s) | 1109, 1454, 2356, 2724 |
| MunI | CAATTG | 1 cut(s) | 1967 |
| Mva1269I | GAATGC | 3 cut(s) | 143, 1047, 2435 |
| MvaI | CCWGG | 2 cut(s) | 1109, 1454 |
| MvnI | CGCG | 1 cut(s) | 38 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1391, 1640 |
| NciI | CCSGG | 2 cut(s) | 2356, 2724 |
| NdeI | CATATG | 1 cut(s) | 2183 |
| NdeII | GATC | 3 cut(s) | 1502, 2125, 2800 |
| NlaIII | CATG | 6 cut(s) | 355, 1416, 2222, 2401, 2540, 2552 |
| NlaIV | GGNNCC | 3 cut(s) | 1221, 1536, 2090 |
| NmuCI | GTSAC | 3 cut(s) | 196, 2050, 2701 |
| NspI | RCATGY | 1 cut(s) | 355 |
| NspV | TTCGAA | 1 cut(s) | 1774 |
| PaeI | GCATGC | 1 cut(s) | 355 |
| PagI | TCATGA | 1 cut(s) | 2218 |
| PasI | CCCWGGG | 1 cut(s) | 1108 |
| PciSI | GCTCTTC | 3 cut(s) | 769, 1137, 1803 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 153, 1803 |
| PctI | GAATGC | 3 cut(s) | 143, 1047, 2435 |
| PdmI | GAANNNNTTC | 3 cut(s) | 308, 763, 1192 |
| PfeI | GAWTC | 7 cut(s) | 538, 833, 989, 1188, 1403, 1459, 2225 |
| PflFI | GACNNNGTC | 2 cut(s) | 152, 2662 |
| PkrI | GCNGC | 5 cut(s) | 127, 1080, 1978, 2652, 2713 |
| PleI | GAGTC | 3 cut(s) | 128, 911, 2273 |
| PpsI | GAGTC | 3 cut(s) | 128, 911, 2273 |
| PpuMI | RGGWCCY | 3 cut(s) | 317, 683, 1220 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1881 |
| PshBI | ATTAAT | 1 cut(s) | 375 |
| PsiI | TTATAA | 1 cut(s) | 2814 |
| Psp5II | RGGWCCY | 3 cut(s) | 317, 683, 1220 |
| Psp6I | CCWGG | 2 cut(s) | 1107, 1452 |
| PspGI | CCWGG | 2 cut(s) | 1107, 1452 |
| PspN4I | GGNNCC | 3 cut(s) | 1221, 1536, 2090 |
| PspPI | GGNCC | 9 cut(s) | 317, 461, 683, 1220, 1277, 1619, 1788, 1832, 1916 |
| PspPPI | RGGWCCY | 3 cut(s) | 317, 683, 1220 |
| PstI | CTGCAG | 1 cut(s) | 1978 |
| PsuI | RGATCY | 1 cut(s) | 1502 |
| PsyI | GACNNNGTC | 2 cut(s) | 152, 2662 |
| PvuII | CAGCTG | 4 cut(s) | 473, 877, 1081, 2711 |
| RsaI | GTAC | 8 cut(s) | 249, 640, 1599, 1612, 1933, 2353, 2686, 2830 |
| RsaNI | GTAC | 8 cut(s) | 248, 639, 1598, 1611, 1932, 2352, 2685, 2829 |
| SalI | GTCGAC | 1 cut(s) | 13 |
| SapI | GCTCTTC | 3 cut(s) | 769, 1137, 1803 |
| SaqAI | TTAA | 6 cut(s) | 375, 869, 927, 1742, 2207, 2898 |
| SatI | GCNGC | 5 cut(s) | 126, 1079, 1977, 2651, 2712 |
| Sau3AI | GATC | 3 cut(s) | 1502, 2125, 2800 |
| Sau96I | GGNCC | 9 cut(s) | 317, 461, 683, 1220, 1277, 1619, 1788, 1832, 1916 |
| ScaI | AGTACT | 1 cut(s) | 640 |
| SchI | GAGTC | 3 cut(s) | 128, 911, 2273 |
| ScrFI | CCNGG | 4 cut(s) | 1109, 1454, 2356, 2724 |
| SduI | GDGCHC | 2 cut(s) | 1132, 2633 |
| SfaNI | GCATC | 5 cut(s) | 338, 593, 1988, 2743, 2836 |
| SfcI | CTRYAG | 3 cut(s) | 1376, 1974, 2569 |
| SfuI | TTCGAA | 1 cut(s) | 1774 |
| SinI | GGWCC | 7 cut(s) | 317, 683, 1220, 1277, 1619, 1832, 1916 |
| SmlI | CTYRAG | 3 cut(s) | 883, 1000, 1349 |
| SmoI | CTYRAG | 3 cut(s) | 883, 1000, 1349 |
| SpeI | ACTAGT | 1 cut(s) | 1685 |
| SphI | GCATGC | 1 cut(s) | 355 |
| SsiI | CCGC | 5 cut(s) | 36, 86, 141, 531, 1835 |
| SspI | AATATT | 2 cut(s) | 57, 1444 |
| StyD4I | CCNGG | 4 cut(s) | 1107, 1452, 2354, 2722 |
| StyI | CCWWGG | 4 cut(s) | 231, 1273, 1987, 2791 |
| TaaI | ACNGT | 6 cut(s) | 577, 1369, 1380, 1534, 1666, 2896 |
| TaiI | ACGT | 3 cut(s) | 35, 1435, 2256 |
| TaqI | TCGA | 7 cut(s) | 14, 147, 156, 491, 1774, 1797, 1806 |
| TaqII | GACCGA | 2 cut(s) | 2438, 2671 |
| TatI | WGTACW | 3 cut(s) | 247, 638, 2828 |
| TfiI | GAWTC | 7 cut(s) | 538, 833, 989, 1188, 1403, 1459, 2225 |
| Tru1I | TTAA | 6 cut(s) | 375, 869, 927, 1742, 2207, 2898 |
| Tru9I | TTAA | 6 cut(s) | 375, 869, 927, 1742, 2207, 2898 |
| TscAI | CASTG | 6 cut(s) | 424, 727, 1132, 1374, 1645, 2470 |
| TseFI | GTSAC | 3 cut(s) | 196, 2050, 2701 |
| TseI | GCWGC | 5 cut(s) | 125, 1078, 1976, 2650, 2711 |
| Tsp45I | GTSAC | 3 cut(s) | 196, 2050, 2701 |
| TspDTI | ATGAA | 9 cut(s) | 160, 803, 1275, 1317, 2207, 2234, 2565, 2627, 2737 |
| TspGWI | ACGGA | 2 cut(s) | 1080, 1274 |
| TspRI | CASTG | 6 cut(s) | 424, 727, 1132, 1374, 1645, 2470 |
| Tth111I | GACNNNGTC | 2 cut(s) | 152, 2662 |
| VneI | GTGCAC | 1 cut(s) | 2629 |
| VpaK11BI | GGWCC | 7 cut(s) | 317, 683, 1220, 1277, 1619, 1832, 1916 |
| VspI | ATTAAT | 1 cut(s) | 375 |
| XapI | RAATTY | 7 cut(s) | 49, 652, 1084, 1677, 2476, 2582, 2744 |
| XbaI | TCTAGA | 2 cut(s) | 2122, 2452 |
| XceI | RCATGY | 1 cut(s) | 355 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 261 |
| XmiI | GTMKAC | 1 cut(s) | 14 |
| XmnI | GAANNNNTTC | 3 cut(s) | 308, 763, 1192 |
| ZrmI | AGTACT | 1 cut(s) | 640 |