pycom05g23830

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
25560007 .. 25561016
1010 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g23830.8

Sequence Viewer

Length: 684 bp
ATGTGGGATTTCAACAAAAATATGGTGATGTTGAGTATTGATCAGAATTATTTCACCGGTCACCTACCGGCATTCATTGGCAATATGTTTGCATTGACTGAATTGAGACCCGTAGCAATTTGTATACTTCAGTTTGAATATCATAAACTACAGTTATGTTCTTTACACCTTTTTGCTACTATTTATGCTGTAATCTACAAAAAAATCATTATGCTTTTATTAAATAATGCAGTACTAGTTTCCTGTTATGTAATGTATATTCAATCCAATTCATTCTCTGGGCCCATCCCCAAGGAGCTTGGAAACCTTAAGGAAAAATTTTGTGTTGTAAATATTAGATACAGAACCTGTTGTTATAAGTTTCTCTCTAGCAGAGCATATTCTCTTCATCTCTCTACAATTCACACACACTCTGTGCTTTACATAACCGTTGGAATCCAAGGTGGATTCTCTCTCTTCACAAAACAATCTCATATTTGCCTTACTACATTAGAGCTGCACACTTGGTATTTTAAACTCAACTATAGACTTACAATTCAACAGAACCTTCTATCACTCTTCAATAATTGCTTTCAAGTAAGTGTTTGCCCGTTCAACATGACCTCCAGGGACATCGGATCAAATAATTTCTCCGGAACACTCCCTCCAGAACTTGGTAATTTAGTCAAGCTCGAGCAACTGTAA

Protein Analysis

228

Amino Acids

26.14

Weight (kDa)

8.94

Isoelectric Point (pI)

33.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 357
AccB7I CCANNNNNTGG 1 cut(s) 653
AccI GTMKAC 1 cut(s) 124
AccIII TCCGGA 1 cut(s) 632
AclWI GGATC 1 cut(s) 625
AcsI RAATTY 1 cut(s) 317
AcuI CTGAAG 1 cut(s) 113
AdeI CACNNNGTG 1 cut(s) 415
AfaI GTAC 1 cut(s) 234
AfiI CCNNNNNNNGG 1 cut(s) 653
AflII CTTAAG 1 cut(s) 308
AgeI ACCGGT 1 cut(s) 56
AgsI TTSAA 7 cut(s) 13, 137, 263, 539, 562, 575, 595
AhlI ACTAGT 1 cut(s) 235
AjnI CCWGG 1 cut(s) 605
AloI GAACNNNNNNTCC 2 cut(s) 628, 660
AluBI AGCT 3 cut(s) 298, 496, 670
AluI AGCT 3 cut(s) 298, 496, 670
Alw26I GTCTC 1 cut(s) 100
AlwI GGATC 1 cut(s) 625
AlwNI CAGNNNCTG 1 cut(s) 348
Ama87I CYCGRG 1 cut(s) 671
Aor13HI TCCGGA 1 cut(s) 632
AoxI GGCC 1 cut(s) 281
ApaI GGGCCC 1 cut(s) 285
ApeKI GCWGC 1 cut(s) 496
ApoI RAATTY 1 cut(s) 317
AsiGI ACCGGT 1 cut(s) 56
Asp700I GAANNNNTTC 1 cut(s) 50
AspS9I GGNCC 2 cut(s) 281, 282
AsuHPI GGTGA 3 cut(s) 37, 46, 53
AvaI CYCGRG 1 cut(s) 671
BaeGI GKGCMC 1 cut(s) 285
BanII GRGCYC 1 cut(s) 285
BbvI GCAGC 1 cut(s) 483
BccI CCATC 1 cut(s) 293
BciT130I CCWGG 1 cut(s) 607
BclI TGATCA 1 cut(s) 40
BcoDI GTCTC 1 cut(s) 100
BcuI ACTAGT 1 cut(s) 235
BfaI CTAG 2 cut(s) 236, 369
BfmI CTRYAG 2 cut(s) 149, 523
BfrI CTTAAG 1 cut(s) 308
BisI GCNGC 1 cut(s) 497
BlsI GCNGC 1 cut(s) 498
BmcAI AGTACT 1 cut(s) 234
Bme1390I CCNGG 1 cut(s) 607
BmeT110I CYCGRG 1 cut(s) 671
BmgT120I GGNCC 2 cut(s) 281, 282
BmiI GGNNCC 1 cut(s) 283
BmrFI CCNGG 1 cut(s) 607
BpmI CTGGAG 2 cut(s) 589, 630
BsaI GGTCTC 1 cut(s) 100
BsaJI CCNNGG 3 cut(s) 291, 439, 606
BsaWI WCCGGW 2 cut(s) 56, 632
BsaXI ACNNNNNCTCC 4 cut(s) 587, 617, 628, 658
Bsc4I CCNNNNNNNGG 1 cut(s) 653
Bse118I RCCGGY 2 cut(s) 56, 67
BseAI TCCGGA 1 cut(s) 632
BseBI CCWGG 1 cut(s) 607
BseDI CCNNGG 3 cut(s) 291, 439, 606
BseGI GGATG 1 cut(s) 285
BseLI CCNNNNNNNGG 1 cut(s) 653
BseSI GKGCMC 1 cut(s) 285
BseXI GCAGC 1 cut(s) 483
BsgI GTGCAG 1 cut(s) 482
BshFI GGCC 1 cut(s) 283
BshTI ACCGGT 1 cut(s) 56
BsiHKCI CYCGRG 1 cut(s) 671
BsiSI CCGG 3 cut(s) 57, 68, 633
BslFI GGGAC 1 cut(s) 623
BslI CCNNNNNNNGG 1 cut(s) 653
BsmAI GTCTC 1 cut(s) 100
BsmFI GGGAC 1 cut(s) 623
BsmI GAATGC 1 cut(s) 71
BsnI GGCC 1 cut(s) 283
Bso31I GGTCTC 1 cut(s) 100
BsoBI CYCGRG 1 cut(s) 671
Bsp120I GGGCCC 1 cut(s) 281
Bsp1286I GDGCHC 1 cut(s) 285
Bsp13I TCCGGA 1 cut(s) 632
Bsp143I GATC 2 cut(s) 40, 617
BspANI GGCC 1 cut(s) 283
BspEI TCCGGA 1 cut(s) 632
BspLI GGNNCC 1 cut(s) 283
BspPI GGATC 1 cut(s) 625
BspTI CTTAAG 1 cut(s) 308
BspTNI GGTCTC 1 cut(s) 100
BsrFI RCCGGY 2 cut(s) 56, 67
BssAI RCCGGY 2 cut(s) 56, 67
BssECI CCNNGG 3 cut(s) 291, 439, 606
BssMI GATC 2 cut(s) 40, 617
BssNAI GTATAC 1 cut(s) 125
BssT1I CCWWGG 2 cut(s) 291, 439
Bst1107I GTATAC 1 cut(s) 125
Bst2UI CCWGG 1 cut(s) 607
Bst4CI ACNGT 3 cut(s) 153, 430, 681
Bst6I CTCTTC 3 cut(s) 390, 461, 563
BstAFI CTTAAG 1 cut(s) 308
BstEII GGTNACC 1 cut(s) 59
BstF5I GGATG 1 cut(s) 285
BstKTI GATC 2 cut(s) 43, 620
BstMAI GTCTC 1 cut(s) 100
BstMBI GATC 2 cut(s) 40, 617
BstNI CCWGG 1 cut(s) 607
BstPI GGTNACC 1 cut(s) 59
BstSCI CCNGG 1 cut(s) 605
BstSFI CTRYAG 2 cut(s) 149, 523
BstSLI GKGCMC 1 cut(s) 285
BstV1I GCAGC 1 cut(s) 483
BstZ17I GTATAC 1 cut(s) 125
BsuRI GGCC 1 cut(s) 283
BtsCI GGATG 1 cut(s) 285
CaiI CAGNNNCTG 1 cut(s) 348
Cfr10I RCCGGY 2 cut(s) 56, 67
Cfr13I GGNCC 2 cut(s) 281, 282
Csp6I GTAC 1 cut(s) 233
CspAI ACCGGT 1 cut(s) 56
CviAII CATG 1 cut(s) 598
CviJI RGCY 4 cut(s) 283, 298, 496, 670
CviKI_1 RGCY 4 cut(s) 283, 298, 496, 670
CviQI GTAC 1 cut(s) 233
DpnI GATC 2 cut(s) 42, 619
DpnII GATC 2 cut(s) 40, 617
DraI TTTAAA 1 cut(s) 514
DraIII CACNNNGTG 1 cut(s) 415
Eam1104I CTCTTC 3 cut(s) 390, 461, 563
EarI CTCTTC 3 cut(s) 390, 461, 563
Eco130I CCWWGG 2 cut(s) 291, 439
Eco24I GRGCYC 1 cut(s) 285
Eco31I GGTCTC 1 cut(s) 100
Eco57I CTGAAG 1 cut(s) 113
Eco88I CYCGRG 1 cut(s) 671
Eco91I GGTNACC 1 cut(s) 59
EcoO65I GGTNACC 1 cut(s) 59
EcoRII CCWGG 1 cut(s) 605
EcoT14I CCWWGG 2 cut(s) 291, 439
EcoT38I GRGCYC 1 cut(s) 285
ErhI CCWWGG 2 cut(s) 291, 439
FaeI CATG 1 cut(s) 601
FaqI GGGAC 1 cut(s) 623
FatI CATG 1 cut(s) 597
FbaI TGATCA 1 cut(s) 40
FblI GTMKAC 1 cut(s) 124
Fnu4HI GCNGC 1 cut(s) 497
FokI GGATG 1 cut(s) 272
FriOI GRGCYC 1 cut(s) 285
Fsp4HI GCNGC 1 cut(s) 497
FspBI CTAG 2 cut(s) 236, 369
GluI GCNGC 1 cut(s) 497
GsuI CTGGAG 2 cut(s) 589, 630
HaeIII GGCC 1 cut(s) 283
HapII CCGG 3 cut(s) 57, 68, 633
Hin1II CATG 1 cut(s) 601
HinfI GANTC 2 cut(s) 435, 447
HpaII CCGG 3 cut(s) 57, 68, 633
HphI GGTGA 3 cut(s) 37, 46, 53
Hpy166II GTNNAC 1 cut(s) 125
Hpy188I TCNGA 2 cut(s) 45, 617
Hpy188III TCNNGA 2 cut(s) 633, 647
Hpy8I GTNNAC 1 cut(s) 125
HpyAV CCTTC 1 cut(s) 557
HpyCH4III ACNGT 3 cut(s) 153, 430, 681
HpyCH4V TGCA 3 cut(s) 92, 230, 499
Hsp92II CATG 1 cut(s) 601
Kpn2I TCCGGA 1 cut(s) 632
Ksp22I TGATCA 1 cut(s) 40
Kzo9I GATC 2 cut(s) 40, 617
LmnI GCTCC 1 cut(s) 295
LpnPI CCDG 9 cut(s) 70, 81, 256, 264, 361, 592, 619, 646, 660
Lsp1109I GCAGC 1 cut(s) 483
MaeI CTAG 2 cut(s) 236, 369
MaeIII GTNAC 1 cut(s) 59
MalI GATC 2 cut(s) 42, 619
MboI GATC 2 cut(s) 40, 617
MboII GAAGA 3 cut(s) 377, 448, 550
MhlI GDGCHC 1 cut(s) 285
MmeI TCCRAC 1 cut(s) 412
MnlI CCTC 2 cut(s) 613, 654
MroI TCCGGA 1 cut(s) 632
MroXI GAANNNNTTC 1 cut(s) 50
MseI TTAA 3 cut(s) 221, 309, 513
MspCI CTTAAG 1 cut(s) 308
MspI CCGG 3 cut(s) 57, 68, 633
MspR9I CCNGG 1 cut(s) 607
Mva1269I GAATGC 1 cut(s) 71
MvaI CCWGG 1 cut(s) 607
NdeII GATC 2 cut(s) 40, 617
NlaIII CATG 1 cut(s) 601
NlaIV GGNNCC 1 cut(s) 283
NmuCI GTSAC 1 cut(s) 59
PaeR7I CTCGAG 1 cut(s) 671
PctI GAATGC 1 cut(s) 71
PdmI GAANNNNTTC 1 cut(s) 50
PfeI GAWTC 2 cut(s) 435, 447
PflMI CCANNNNNTGG 1 cut(s) 653
PinAI ACCGGT 1 cut(s) 56
PkrI GCNGC 1 cut(s) 498
PsiI TTATAA 1 cut(s) 357
Psp6I CCWGG 1 cut(s) 605
PspEI GGTNACC 1 cut(s) 59
PspGI CCWGG 1 cut(s) 605
PspN4I GGNNCC 1 cut(s) 283
PspOMI GGGCCC 1 cut(s) 281
PspPI GGNCC 2 cut(s) 281, 282
PspXI VCTCGAGB 1 cut(s) 671
PstNI CAGNNNCTG 1 cut(s) 348
RsaI GTAC 1 cut(s) 234
RsaNI GTAC 1 cut(s) 233
SaqAI TTAA 3 cut(s) 221, 309, 513
SatI GCNGC 1 cut(s) 497
Sau3AI GATC 2 cut(s) 40, 617
Sau96I GGNCC 2 cut(s) 281, 282
ScaI AGTACT 1 cut(s) 234
ScrFI CCNGG 1 cut(s) 607
SduI GDGCHC 1 cut(s) 285
SfcI CTRYAG 2 cut(s) 149, 523
Sfr274I CTCGAG 1 cut(s) 671
SlaI CTCGAG 1 cut(s) 671
SmlI CTYRAG 2 cut(s) 308, 671
SmoI CTYRAG 2 cut(s) 308, 671
SpeI ACTAGT 1 cut(s) 235
SspI AATATT 1 cut(s) 334
SspMI CTAG 2 cut(s) 236, 369
StyD4I CCNGG 1 cut(s) 605
StyI CCWWGG 2 cut(s) 291, 439
TaaI ACNGT 3 cut(s) 153, 430, 681
TaqI TCGA 1 cut(s) 672
TatI WGTACW 1 cut(s) 232
TfiI GAWTC 2 cut(s) 435, 447
Tru1I TTAA 3 cut(s) 221, 309, 513
Tru9I TTAA 3 cut(s) 221, 309, 513
TseFI GTSAC 1 cut(s) 59
TseI GCWGC 1 cut(s) 496
Tsp45I GTSAC 1 cut(s) 59
TspDTI ATGAA 3 cut(s) 64, 261, 377
Van91I CCANNNNNTGG 1 cut(s) 653
Vha464I CTTAAG 1 cut(s) 308
XapI RAATTY 1 cut(s) 317
XhoI CTCGAG 1 cut(s) 671
XmiI GTMKAC 1 cut(s) 124
XmnI GAANNNNTTC 1 cut(s) 50
XspI CTAG 2 cut(s) 236, 369
ZrmI AGTACT 1 cut(s) 234
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.