MD00G1024500.v1.1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
OG0000088
Physical Location & Seq
Forward (+)
3990984 .. 3994595
3612 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1024500.v1.1.491

Sequence Viewer

Length: 1602 bp
ATGTCACAAATGAACTTAGTGGTCAACAACTTCACATTTGACAGTTCAAACATAACTCTTCCTGGATTGAATTGCCTCCAGAGAAATTTTCCATGCAATCGAAATGCTCCACGATATGCAAACTTCTCAATCAATTGTGGTGGAAAACAAATGACGGGAAGTGATGGCATATTGTATGAGACTGAAGACTCAGCTCTTGGCCCAGCAACATTCAATGTAACCAGTACAGAGAAATTGGCTGTCAGCAATGCCGGTTTGTTTTCTGAGAGAAAGGACCCATTTTTTCTGGTAAACACCCTTGCACAAGTCACTAGAACAGATGTGACCCCGGAGCTTTTCCAGACTTCAAGAGTGTCCCCAGGATCACTGAGATACTATGGCATGGGCCTTGAGAATGGGCCTTACACTGTAACATTGCACTTTGCAGAGACGGTTTATGAAAGTCGCACTTCTCAAAAATGGGAAAGTCTAGGACGGCGTGTATTTGATATCTATATTCCGGGTACCCGAAGGACGAAGGACTTTGACATATCCAAGGAGGCAGGTGGGGCTAAACTAGGAATTATGAAAAGATTCAATGTTAGCGTGTCAGAGAATTATCTTGAAATTCATCTATTCTGGGCTGGTAAAGGGAGTTGTTGCACACCTTCGGCAGGTGATTACGGCCCACTAATAGCAGCCGTCCATGCTGCTTCAGATTTTACACTAACAGTTTCTGGGCTTCCACCAACTACTCCAGGAAAGAAGAGCAGGAATGGGTTGATAGTTGGAATTGCAGTTCTTGTTGGAGTTGTGAGCTTACTATTAATATTTGCGATTCTATATACGAGGGGGGGGGGAAATCAGAAAAAAGGACGACGAAGTAAAACTTATGTCACACTGTTTCGTGAATGTGCAGATATTTTAGGATTAGGCCCTCAACCAAATATTTTCAGTTATGCTGAGTTGAGAGCTGCAACCGAAGATTTTAATCCTTCAAATAAGTCAGGAGAGGGAGGATATGGCCCTGTTTATGAGGGTACACTTTCTGATGGGAGAGTAAGTCAATTTGTATCTGAAATTGCTACCATATCTGCTGTGCAACATCGGAATCTAGTGAAATTGTATGGATGCTGCATCGAAGGCAGCCACCGCATTTTGGTTTATGAGTATCTTGAAAACAAGAGCCTGGATCAGGCACTTTTTGGAACAAGTAACTTGCACCTTGACTGGCCTACTCGATTCAATATATTGTTGGGAACAGCAAGAGGACTTGCTTACATTCATGAGGAGTCAAGGCCAAGGATTGTACATCGAGATGTCAAAGCGAGTAATATTTTGCTCGATGCAAAACTCTCCCCAAAAATATCAGATTTTGGACTGGCAAAGCTTTATGATGACGAAAAAACCCACATCAGCACCCGGGTTGCAGGGACAATAGGCTATTTGGCACCGGAGTATGCATTGTTTGGACATTTGACAGAGAAGGCTAATGTGTTTGGTTTTGGAGTCGTCGTTTTGGAGATCCTCAGCGGGAGACCAAATTCTTACAATAACTTGGATCCAGAAAAGATTTATCTTCTTGAATGGGTGGGACTCTACATGAAAACGACCAAACTCTAG

Protein Analysis

534

Amino Acids

58.65

Weight (kDa)

8.58

Isoelectric Point (pI)

39.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 42 - 228 9.3e-35 Malectin domain
PK_Tyr_Ser-Thr PF07714 346 - 519 3e-34 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 348 - 512 1.2e-33 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 533, 644
Acc36I ACCTGC 2 cut(s) 533, 644
Acc65I GGTACC 1 cut(s) 503
AccB1I GGYRCC 2 cut(s) 503, 1429
AciI CCGC 2 cut(s) 1132, 1512
AclWI GGATC 5 cut(s) 370, 1179, 1498, 1535, 1548
AcsI RAATTY 3 cut(s) 85, 606, 1522
AcuI CTGAAG 2 cut(s) 204, 678
AfaI GTAC 4 cut(s) 226, 505, 1021, 1290
AfiI CCNNNNNNNGG 3 cut(s) 653, 1138, 1174
AjnI CCWGG 4 cut(s) 61, 358, 736, 1167
AloI GAACNNNNNNTCC 2 cut(s) 762, 794
AluBI AGCT 5 cut(s) 194, 334, 798, 953, 1369
AluI AGCT 5 cut(s) 194, 334, 798, 953, 1369
Alw26I GTCTC 3 cut(s) 173, 422, 1510
AlwI GGATC 5 cut(s) 370, 1179, 1498, 1535, 1548
AlwNI CAGNNNCTG 1 cut(s) 716
Ama87I CYCGRG 1 cut(s) 1401
AoxI GGCC 8 cut(s) 199, 385, 398, 664, 913, 1003, 1211, 1277
ApeKI GCWGC 5 cut(s) 677, 689, 953, 1113, 1125
ApoI RAATTY 3 cut(s) 85, 606, 1522
AseI ATTAAT 1 cut(s) 806
Asp700I GAANNNNTTC 1 cut(s) 572
Asp718I GGTACC 1 cut(s) 503
AspS9I GGNCC 7 cut(s) 200, 274, 385, 398, 665, 914, 1004
AsuC2I CCSGG 4 cut(s) 329, 501, 1402, 1403
AsuHPI GGTGA 1 cut(s) 668
AvaI CYCGRG 1 cut(s) 1401
AvaII GGWCC 1 cut(s) 274
BamHI GGATCC 1 cut(s) 1540
BanI GGYRCC 2 cut(s) 503, 1429
BbsI GAAGAC 1 cut(s) 192
BbvCI CCTCAGC 1 cut(s) 1508
BbvI GCAGC 5 cut(s) 676, 689, 940, 1100, 1137
BccI CCATC 2 cut(s) 158, 1025
BceAI ACGGC 3 cut(s) 491, 665, 679
BciT130I CCWGG 4 cut(s) 63, 360, 738, 1169
BcnI CCSGG 4 cut(s) 329, 501, 1402, 1403
BcoDI GTCTC 3 cut(s) 173, 422, 1510
BfaI CTAG 5 cut(s) 312, 470, 557, 1094, 1600
BfuAI ACCTGC 2 cut(s) 533, 644
BisI GCNGC 5 cut(s) 678, 690, 954, 1114, 1126
BlsI GCNGC 5 cut(s) 679, 691, 955, 1115, 1127
Bme1390I CCNGG 8 cut(s) 63, 329, 360, 501, 738, 1169, 1402, 1403
Bme18I GGWCC 1 cut(s) 274
BmeT110I CYCGRG 1 cut(s) 1401
BmgT120I GGNCC 7 cut(s) 200, 274, 385, 398, 665, 914, 1004
BmiI GGNNCC 4 cut(s) 276, 505, 1431, 1542
BmrFI CCNGG 8 cut(s) 63, 329, 360, 501, 738, 1169, 1402, 1403
BmsI GCATC 3 cut(s) 1100, 1125, 1315
BpiI GAAGAC 1 cut(s) 192
BpmI CTGGAG 2 cut(s) 62, 720
Bpu10I CCTNAGC 1 cut(s) 1508
BpuEI CTTGAG 1 cut(s) 410
BpuMI CCSGG 4 cut(s) 329, 501, 1402, 1403
BsaBI GATNNNNATC 1 cut(s) 969
BsaI GGTCTC 1 cut(s) 1510
BsaJI CCNNGG 5 cut(s) 327, 358, 534, 1280, 1401
BsaWI WCCGGW 1 cut(s) 1432
BsaXI ACNNNNNCTCC 4 cut(s) 1027, 1057, 1479, 1509
Bsc4I CCNNNNNNNGG 3 cut(s) 653, 1138, 1174
Bse118I RCCGGY 1 cut(s) 251
Bse1I ACTGG 3 cut(s) 222, 1214, 1365
Bse3DI GCAATG 2 cut(s) 253, 413
Bse8I GATNNNNATC 1 cut(s) 969
BseBI CCWGG 4 cut(s) 63, 360, 738, 1169
BseDI CCNNGG 5 cut(s) 327, 358, 534, 1280, 1401
BseGI GGATG 1 cut(s) 1115
BseJI GATNNNNATC 1 cut(s) 969
BseLI CCNNNNNNNGG 3 cut(s) 653, 1138, 1174
BseMI GCAATG 2 cut(s) 253, 413
BseMII CTCAG 5 cut(s) 204, 255, 359, 933, 1522
BseNI ACTGG 3 cut(s) 222, 1214, 1365
BseRI GAGGAG 1 cut(s) 1283
BseXI GCAGC 5 cut(s) 676, 689, 940, 1100, 1137
BseYI CCCAGC 1 cut(s) 202
BsgI GTGCAG 1 cut(s) 915
BshFI GGCC 8 cut(s) 201, 387, 400, 666, 915, 1005, 1213, 1279
BshNI GGYRCC 2 cut(s) 503, 1429
BsiHKCI CYCGRG 1 cut(s) 1401
BsiSI CCGG 5 cut(s) 252, 329, 500, 1402, 1433
BslFI GGGAC 3 cut(s) 340, 1426, 1587
BslI CCNNNNNNNGG 3 cut(s) 653, 1138, 1174
BsmAI GTCTC 3 cut(s) 173, 422, 1510
BsmBI CGTCTC 1 cut(s) 422
BsmFI GGGAC 3 cut(s) 340, 1426, 1587
BsnI GGCC 8 cut(s) 201, 387, 400, 666, 915, 1005, 1213, 1279
Bso31I GGTCTC 1 cut(s) 1510
BsoBI CYCGRG 1 cut(s) 1401
Bsp1407I TGTACA 1 cut(s) 1288
Bsp143I GATC 4 cut(s) 362, 1171, 1503, 1540
BspACI CCGC 2 cut(s) 1132, 1512
BspANI GGCC 8 cut(s) 201, 387, 400, 666, 915, 1005, 1213, 1279
BspCNI CTCAG 5 cut(s) 203, 256, 360, 934, 1521
BspHI TCATGA 1 cut(s) 1264
BspLI GGNNCC 4 cut(s) 276, 505, 1431, 1542
BspMI ACCTGC 2 cut(s) 533, 644
BspPI GGATC 5 cut(s) 370, 1179, 1498, 1535, 1548
BspQI GCTCTTC 1 cut(s) 740
BspT107I GGYRCC 2 cut(s) 503, 1429
BspTNI GGTCTC 1 cut(s) 1510
BsrDI GCAATG 2 cut(s) 253, 413
BsrFI RCCGGY 1 cut(s) 251
BsrGI TGTACA 1 cut(s) 1288
BsrI ACTGG 3 cut(s) 222, 1214, 1365
BssAI RCCGGY 1 cut(s) 251
BssECI CCNNGG 5 cut(s) 327, 358, 534, 1280, 1401
BssMI GATC 4 cut(s) 362, 1171, 1503, 1540
BssT1I CCWWGG 2 cut(s) 534, 1280
Bst2UI CCWGG 4 cut(s) 63, 360, 738, 1169
Bst4CI ACNGT 5 cut(s) 44, 409, 433, 712, 882
Bst6I CTCTTC 2 cut(s) 63, 740
BstAUI TGTACA 1 cut(s) 1288
BstDEI CTNAG 6 cut(s) 16, 190, 264, 368, 942, 1508
BstENI CCTNNNNNAGG 2 cut(s) 651, 1172
BstF5I GGATG 1 cut(s) 1115
BstKTI GATC 4 cut(s) 365, 1174, 1506, 1543
BstMAI GTCTC 3 cut(s) 173, 422, 1510
BstMBI GATC 4 cut(s) 362, 1171, 1503, 1540
BstMWI GCNNNNNNNGC 4 cut(s) 548, 686, 1122, 1131
BstNI CCWGG 4 cut(s) 63, 360, 738, 1169
BstSCI CCNGG 8 cut(s) 61, 327, 358, 499, 736, 1167, 1400, 1401
BstV1I GCAGC 5 cut(s) 676, 689, 940, 1100, 1137
BstV2I GAAGAC 1 cut(s) 192
BstX2I RGATCY 2 cut(s) 1503, 1540
BstYI RGATCY 2 cut(s) 1503, 1540
BsuRI GGCC 8 cut(s) 201, 387, 400, 666, 915, 1005, 1213, 1279
BtsCI GGATG 1 cut(s) 1115
BtsIMutI CAGTG 3 cut(s) 365, 405, 878
BveI ACCTGC 2 cut(s) 533, 644
CaiI CAGNNNCTG 1 cut(s) 716
CciI TCATGA 1 cut(s) 1264
Cfr10I RCCGGY 1 cut(s) 251
Cfr13I GGNCC 7 cut(s) 200, 274, 385, 398, 665, 914, 1004
Cfr9I CCCGGG 1 cut(s) 1401
Csp6I GTAC 4 cut(s) 225, 504, 1020, 1289
CspCI CAANNNNNGTGG 2 cut(s) 121, 156
CviAII CATG 5 cut(s) 93, 382, 686, 1265, 1582
CviQI GTAC 4 cut(s) 225, 504, 1020, 1289
DdeI CTNAG 6 cut(s) 16, 190, 264, 368, 942, 1508
DpnI GATC 4 cut(s) 364, 1173, 1505, 1542
DpnII GATC 4 cut(s) 362, 1171, 1503, 1540
Eam1104I CTCTTC 2 cut(s) 63, 740
EarI CTCTTC 2 cut(s) 63, 740
Eco130I CCWWGG 2 cut(s) 534, 1280
Eco31I GGTCTC 1 cut(s) 1510
Eco32I GATATC 1 cut(s) 490
Eco47I GGWCC 1 cut(s) 274
Eco57I CTGAAG 2 cut(s) 204, 678
Eco88I CYCGRG 1 cut(s) 1401
EcoNI CCTNNNNNAGG 2 cut(s) 651, 1172
EcoO109I RGGNCCY 2 cut(s) 274, 914
EcoRII CCWGG 4 cut(s) 61, 358, 736, 1167
EcoRV GATATC 1 cut(s) 490
EcoT14I CCWWGG 2 cut(s) 534, 1280
EcoT22I ATGCAT 1 cut(s) 1444
ErhI CCWWGG 2 cut(s) 534, 1280
Esp3I CGTCTC 1 cut(s) 422
FaeI CATG 5 cut(s) 96, 385, 689, 1268, 1585
FalI AAGNNNNNCTT 4 cut(s) 433, 465, 853, 885
FaqI GGGAC 3 cut(s) 340, 1426, 1587
FatI CATG 5 cut(s) 92, 381, 685, 1264, 1581
FauI CCCGC 1 cut(s) 1505
Fnu4HI GCNGC 5 cut(s) 678, 690, 954, 1114, 1126
FokI GGATG 1 cut(s) 1122
Fsp4HI GCNGC 5 cut(s) 678, 690, 954, 1114, 1126
FspBI CTAG 5 cut(s) 312, 470, 557, 1094, 1600
GluI GCNGC 5 cut(s) 678, 690, 954, 1114, 1126
GsaI CCCAGC 1 cut(s) 206
GsuI CTGGAG 2 cut(s) 62, 720
HaeIII GGCC 8 cut(s) 201, 387, 400, 666, 915, 1005, 1213, 1279
HapII CCGG 5 cut(s) 252, 329, 500, 1402, 1433
Hin1II CATG 5 cut(s) 96, 385, 689, 1268, 1585
HincII GTYRAC 1 cut(s) 25
HindII GTYRAC 1 cut(s) 25
HindIII AAGCTT 1 cut(s) 1367
HinfI GANTC 8 cut(s) 188, 573, 817, 1090, 1221, 1271, 1488, 1575
HpaII CCGG 5 cut(s) 252, 329, 500, 1402, 1433
HphI GGTGA 1 cut(s) 668
Hpy166II GTNNAC 3 cut(s) 25, 292, 1022
Hpy188I TCNGA 8 cut(s) 265, 592, 697, 846, 1030, 1057, 1089, 1351
Hpy8I GTNNAC 3 cut(s) 25, 292, 1022
Hpy99I CGWCG 2 cut(s) 861, 1496
HpyAV CCTTC 6 cut(s) 504, 511, 657, 984, 1115, 1459
HpyCH4III ACNGT 5 cut(s) 44, 409, 433, 712, 882
HpyF10VI GCNNNNNNNGC 4 cut(s) 548, 686, 1122, 1131
HpyF3I CTNAG 6 cut(s) 16, 190, 264, 368, 942, 1508
Hsp92II CATG 5 cut(s) 96, 385, 689, 1268, 1585
KpnI GGTACC 1 cut(s) 507
Kzo9I GATC 4 cut(s) 362, 1171, 1503, 1540
LguI GCTCTTC 1 cut(s) 740
LmnI GCTCC 2 cut(s) 112, 331
Lsp1109I GCAGC 5 cut(s) 676, 689, 940, 1100, 1137
LweI GCATC 3 cut(s) 1100, 1125, 1315
MaeI CTAG 5 cut(s) 312, 470, 557, 1094, 1600
MaeIII GTNAC 7 cut(s) 3, 217, 307, 322, 409, 874, 1193
MalI GATC 4 cut(s) 364, 1173, 1505, 1542
MboI GATC 4 cut(s) 362, 1171, 1503, 1540
MboII GAAGA 5 cut(s) 50, 197, 757, 974, 1550
MfeI CAATTG 1 cut(s) 133
MflI RGATCY 2 cut(s) 1503, 1540
MlyI GAGTC 4 cut(s) 182, 1280, 1497, 1569
MmeI TCCRAC 2 cut(s) 748, 766
Mph1103I ATGCAT 1 cut(s) 1444
MroXI GAANNNNTTC 1 cut(s) 572
MseI TTAA 2 cut(s) 806, 969
MslI CAYNNNNRTG 1 cut(s) 1296
MspA1I CMGCKG 1 cut(s) 1512
MspI CCGG 5 cut(s) 252, 329, 500, 1402, 1433
MspR9I CCNGG 8 cut(s) 63, 329, 360, 501, 738, 1169, 1402, 1403
MunI CAATTG 1 cut(s) 133
MvaI CCWGG 4 cut(s) 63, 360, 738, 1169
MwoI GCNNNNNNNGC 4 cut(s) 548, 686, 1122, 1131
NciI CCSGG 4 cut(s) 329, 501, 1402, 1403
NdeII GATC 4 cut(s) 362, 1171, 1503, 1540
NlaIII CATG 5 cut(s) 96, 385, 689, 1268, 1585
NlaIV GGNNCC 4 cut(s) 276, 505, 1431, 1542
NmuCI GTSAC 4 cut(s) 3, 307, 322, 874
NsiI ATGCAT 1 cut(s) 1444
PagI TCATGA 1 cut(s) 1264
PaqCI CACCTGC 2 cut(s) 533, 644
PciSI GCTCTTC 1 cut(s) 740
PdmI GAANNNNTTC 1 cut(s) 572
PfeI GAWTC 4 cut(s) 573, 817, 1090, 1221
PfoI TCCNGGA 2 cut(s) 61, 736
PkrI GCNGC 5 cut(s) 679, 691, 955, 1115, 1127
PleI GAGTC 4 cut(s) 182, 1279, 1496, 1569
PpsI GAGTC 4 cut(s) 182, 1279, 1496, 1569
PpuMI RGGWCCY 1 cut(s) 274
PshBI ATTAAT 1 cut(s) 806
Psp5II RGGWCCY 1 cut(s) 274
Psp6I CCWGG 4 cut(s) 61, 358, 736, 1167
PspFI CCCAGC 1 cut(s) 202
PspGI CCWGG 4 cut(s) 61, 358, 736, 1167
PspN4I GGNNCC 4 cut(s) 276, 505, 1431, 1542
PspPI GGNCC 7 cut(s) 200, 274, 385, 398, 665, 914, 1004
PspPPI RGGWCCY 1 cut(s) 274
PstNI CAGNNNCTG 1 cut(s) 716
PsuI RGATCY 2 cut(s) 1503, 1540
RsaI GTAC 4 cut(s) 226, 505, 1021, 1290
RsaNI GTAC 4 cut(s) 225, 504, 1020, 1289
RseI CAYNNNNRTG 1 cut(s) 1296
SapI GCTCTTC 1 cut(s) 740
SaqAI TTAA 2 cut(s) 806, 969
SatI GCNGC 5 cut(s) 678, 690, 954, 1114, 1126
Sau3AI GATC 4 cut(s) 362, 1171, 1503, 1540
Sau96I GGNCC 7 cut(s) 200, 274, 385, 398, 665, 914, 1004
SchI GAGTC 4 cut(s) 182, 1280, 1497, 1569
ScrFI CCNGG 8 cut(s) 63, 329, 360, 501, 738, 1169, 1402, 1403
SetI ASST 9 cut(s) 196, 336, 547, 649, 658, 800, 955, 1206, 1371
SfaNI GCATC 3 cut(s) 1100, 1125, 1315
SinI GGWCC 1 cut(s) 274
SmaI CCCGGG 1 cut(s) 1403
SmiMI CAYNNNNRTG 1 cut(s) 1296
SmlI CTYRAG 1 cut(s) 389
SmoI CTYRAG 1 cut(s) 389
SsiI CCGC 2 cut(s) 1132, 1512
SspI AATATT 3 cut(s) 810, 928, 1315
SspMI CTAG 5 cut(s) 312, 470, 557, 1094, 1600
StyD4I CCNGG 8 cut(s) 61, 327, 358, 499, 736, 1167, 1400, 1401
StyI CCWWGG 2 cut(s) 534, 1280
TaaI ACNGT 5 cut(s) 44, 409, 433, 712, 882
TaqI TCGA 5 cut(s) 100, 1119, 1219, 1294, 1323
TatI WGTACW 2 cut(s) 224, 1288
TfiI GAWTC 4 cut(s) 573, 817, 1090, 1221
Tru1I TTAA 2 cut(s) 806, 969
Tru9I TTAA 2 cut(s) 806, 969
TscAI CASTG 3 cut(s) 372, 412, 885
TseFI GTSAC 4 cut(s) 3, 307, 322, 874
TseI GCWGC 5 cut(s) 677, 689, 953, 1113, 1125
Tsp45I GTSAC 4 cut(s) 3, 307, 322, 874
TspDTI ATGAA 6 cut(s) 26, 453, 581, 599, 1253, 1598
TspMI CCCGGG 1 cut(s) 1401
TspRI CASTG 3 cut(s) 372, 412, 885
VpaK11BI GGWCC 1 cut(s) 274
VspI ATTAAT 1 cut(s) 806
XagI CCTNNNNNAGG 2 cut(s) 651, 1172
XapI RAATTY 3 cut(s) 85, 606, 1522
XmaI CCCGGG 1 cut(s) 1401
XmnI GAANNNNTTC 1 cut(s) 572
XspI CTAG 5 cut(s) 312, 470, 557, 1094, 1600
Zsp2I ATGCAT 1 cut(s) 1444
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.