Rmu_sc0009248.1_g000007
ERF Family

Belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009248.1
OG0000088
Physical Location & Seq
Forward (+)
24630 .. 34226
9597 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009248.1_g000007.1.cds

Sequence Viewer

Length: 2991 bp
atgtcactggtggtgtggttttggtatgctgcagcagcctgcagcatattcatctctgggtttgttgcacaggctcaacccaccacagatacctctgaagtgagagcgctgaatgcaatctttcagaaatggaatattacggccaatacaaagcaatggaacacaactggtgatccatgcagtgaacttgcggtagatgaagatgatgagaccgcttatttccatgacgatgattacaatctcctcgtcaaatgcaactgctcttatgattcaaactcaacttgccacattacccaactgaaagcaatcactttggacattgttgctccaattccagaagagctctatgctttgactttccttcaatatctgaatgtgaaaaaaaattacttgacaggacctatctctgcatcgattggaaatctaaccagcatcaaatacttggacttgggacacaacgacttatcaggggaactaccaaaggaaattgaaaaactcaccaatttgacattcttgggtgttggaacactcaacctttctggttctctgcctcctgagatggggtatttaaaaacattaaaagagatttacattgataactctggacttagtggtgagattccaccaacatttgctaatctaacaaacttggaaatattttgggcaacagatataaacctcactggcaggataccggacttcgtaggagattggacaaagcttactaaattgaggttacagggaacctcatttgaaggttccataccatcttcactgtccagattgactcttttgacagagctgcgaattactgatttaacgattgccaacgacaactcttcccttggatttatcaagaatatgacgtttctagaagttttaatgctgaggaataacaatatttctgattcaattccttccaacattggagattaccgaaacttgtttcaactggatttgagcttcaacaatttgaatggacaaataccagactcactatttcatatgagtgagcttgccgtcttgtttcttggaaacaataagttgaatggtagccttcctgagtctaaaagctcgtctcttctcgttgtagatttgtcttacaataatctagtaggccagagctttccaagctgggtcaacgaacaaagcctagaccttaacttggtggccaacaacttcagcatagacagttcagagagcagtggtctaccttcagggttgaattgccttcaaaggggcttcccttgccaccgtggtagtccagtttactataacttcatgattaactgcggtggtcctcaggctacaatatccaatgggactgtgtatgagaaggacattgagccccttggtccagctacatattatgtgactgacacaaacagatggggagttagcaatgtcggtcttaaaacacagtttgtagctgcatcatatttgactgggaccaacattccaaagtatacaatatccacttcatctccaatcggaaatacttcagaccctacgctatttcagagtgcaaggatctctgcttcatcactcagatactatggcttgggtcttgagaatggaaactataccgtgaagcttgaatttgcagaacaagctatcctagatacccttaaaagaaaaagtcttggaagacgtgtgtttgatatatatatccaggatgttcttgttgttaaagattttgatatacggaaggagacaaataagagatctttgctagctattgaaaaggtatacaaggctcaggtggtttcagagaattaccttgaaatccatttcttctgggctggaaaggggacttgctgtataccagaggagggtacttatggacctcttgtttcagccatcagtgctacacctgaattcaaacctaccgtcagcaacaagctgccaagtagtaagaagaataggactgggctgattgtgggaattgttgttggtggtggagttttaattctggtggtgctgcttttctatatttttcaaagaagaaagaggcacaacaccgatgatgactatgatgaagagctagtggggatagatcttggacctctcactttcagtttttctgaactgaaggcagctacaaatgactttagtccagataataagcttggagagggaggatttgggcctgtcttcaaaggtgctctaaatgatggaagagtaattgccgtaaaacaattggctgcatcatccctccaaggaaagaaccggtttgtgactgagattgccactatatcttctgtgcgacacaataacctagtaaatttgtatggattctgcaccgagggagctaaacggctccttgtctatgagtatctggagaacaagagtcttgatcaagcattatttggaaaaagaaccttgcatcttgattggcagacacgttttgatatatgcttgggtgtagctagaggtttaacttatcttcatgaagaatcaaggcttcgaattgtacacagagatgtgaaggcaagtaacattctgcttgactctaatctcattgccaaaatatcagattttggtttggcgaagcattatgatgataaaaagacccacatgaatactcgggttgcgggaacaattgggtatcttgcaccggaatatgctatgcgtggacacttgacagagaaaaccgatgtgtttgcctatggtgttgtcattctagaaattgtcagcggtaggccaaattctgatccaagtttggaaggcgatatggtttatcttcttgaattggcttggaacttgcatgaaaacaaacgtgaagttgatctagtaactactatcaccagccaaacgaaatttggtgatgggagtattggcaacagtctaggaactgatatgtcaactagaggaactgacttcagcttttaccactcatcggcaagtacaagcgtgatgggggatgcagggcaattaccttcaaatgccacttttcccatactcaataatactaatggtgatggtaggtga

Protein Analysis

996

Amino Acids

109.87

Weight (kDa)

5.36

Isoelectric Point (pI)

37.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 4 cut(s) 1210, 1466, 1749, 1822
AciI CCGC 5 cut(s) 191, 213, 1293, 2594, 2697
AclWI GGATC 3 cut(s) 167, 1538, 2708
AcoI YGGCCR 2 cut(s) 141, 1170
AcsI RAATTY 5 cut(s) 1598, 1877, 2284, 2707, 2819
AcuI CTGAAG 6 cut(s) 117, 1165, 1200, 1485, 2111, 2866
AfaI GTAC 3 cut(s) 1837, 2475, 2908
AfeI AGCGCT 1 cut(s) 108
AfiI CCNNNNNNNGG 5 cut(s) 560, 1165, 1237, 1832, 2899
AflIII ACRYGT 2 cut(s) 1651, 2402
AgeI ACCGGT 1 cut(s) 2229
AjiI CACGTC 1 cut(s) 1652
AjnI CCWGG 1 cut(s) 1671
AjuI GAANNNNNNNTTGG 2 cut(s) 494, 526
AloI GAACNNNNNNTCC 2 cut(s) 1599, 1631
Alw21I GWGCWC 2 cut(s) 345, 2167
Alw26I GTCTC 3 cut(s) 203, 1083, 1706
AlwI GGATC 3 cut(s) 167, 1538, 2708
Ama87I CYCGRG 1 cut(s) 2586
Aor51HI AGCGCT 1 cut(s) 108
AoxI GGCC 5 cut(s) 141, 1117, 1170, 2147, 2702
ApoI RAATTY 5 cut(s) 1598, 1877, 2284, 2707, 2819
ArsI GACNNNNNNTTYG 2 cut(s) 1875, 1907
AsiGI ACCGGT 1 cut(s) 2229
Asp700I GAANNNNTTC 1 cut(s) 1498
AspLEI GCGC 1 cut(s) 109
AspS9I GGNCC 7 cut(s) 398, 1298, 1355, 1449, 1844, 2063, 2147
AsuHPI GGTGA 6 cut(s) 182, 490, 626, 2797, 2837, 2990
AsuII TTCGAA 1 cut(s) 2467
AsuNHI GCTAGC 1 cut(s) 1732
AvaI CYCGRG 1 cut(s) 2586
AvaII GGWCC 6 cut(s) 398, 1298, 1355, 1449, 1844, 2063
AxyI CCTNAGG 1 cut(s) 1302
BalI TGGCCA 1 cut(s) 1172
BanII GRGCYC 2 cut(s) 345, 1350
BarI GAAGNNNNNNTAC 2 cut(s) 747, 779
BbsI GAAGAC 2 cut(s) 1654, 2146
Bbv12I GWGCWC 2 cut(s) 345, 2167
BbvCI CCTCAGC 1 cut(s) 887
BccI CCATC 8 cut(s) 553, 775, 1383, 1868, 2168, 2822, 2911, 2975
BceAI ACGGC 4 cut(s) 156, 1004, 2174, 2333
BcgI CGANNNNNNTGC 2 cut(s) 2645, 2679
BciT130I CCWGG 1 cut(s) 1673
BciVI GTATCC 1 cut(s) 684
BclI TGATCA 1 cut(s) 2356
BcoDI GTCTC 3 cut(s) 203, 1083, 1706
BfmI CTRYAG 2 cut(s) 30, 40
BfoI RGCGCY 1 cut(s) 110
BfuI GTATCC 1 cut(s) 684
BglII AGATCT 2 cut(s) 1724, 2056
Bme1390I CCNGG 1 cut(s) 1673
Bme18I GGWCC 6 cut(s) 398, 1298, 1355, 1449, 1844, 2063
BmeT110I CYCGRG 1 cut(s) 2586
BmgBI CACGTC 1 cut(s) 1652
BmgT120I GGNCC 7 cut(s) 398, 1298, 1355, 1449, 1844, 2063, 2147
BmiI GGNNCC 4 cut(s) 745, 760, 1450, 2321
BmrFI CCNGG 1 cut(s) 1673
BmrI ACTGGG 2 cut(s) 1455, 1938
BmsI GCATC 6 cut(s) 419, 441, 1442, 2216, 2395, 2914
BmtI GCTAGC 1 cut(s) 1736
BmuI ACTGGG 2 cut(s) 1455, 1938
BoxI GACNNNNGTC 1 cut(s) 2112
BpiI GAAGAC 2 cut(s) 1654, 2146
BpmI CTGGAG 1 cut(s) 2360
Bpu10I CCTNAGC 2 cut(s) 887, 1758
Bpu14I TTCGAA 1 cut(s) 2467
BpuEI CTTGAG 1 cut(s) 1589
Bsa29I ATCGAT 1 cut(s) 413
BsaBI GATNNNNATC 1 cut(s) 237
BsaI GGTCTC 1 cut(s) 203
BsaJI CCNNGG 5 cut(s) 844, 1255, 1351, 2218, 2304
BsaWI WCCGGW 3 cut(s) 694, 2229, 2617
BsaXI ACNNNNNCTCC 2 cut(s) 1468, 1498
Bsc4I CCNNNNNNNGG 5 cut(s) 560, 1165, 1237, 1832, 2899
Bse118I RCCGGY 1 cut(s) 2229
Bse1I ACTGG 7 cut(s) 12, 172, 688, 957, 1265, 1450, 1933
Bse21I CCTNAGG 1 cut(s) 1302
Bse3DI GCAATG 3 cut(s) 161, 1408, 2520
Bse8I GATNNNNATC 1 cut(s) 237
BseBI CCWGG 1 cut(s) 1673
BseCI ATCGAT 1 cut(s) 413
BseDI CCNNGG 5 cut(s) 844, 1255, 1351, 2218, 2304
BseGI GGATG 3 cut(s) 1681, 2210, 2929
BseJI GATNNNNATC 1 cut(s) 237
BseLI CCNNNNNNNGG 5 cut(s) 560, 1165, 1237, 1832, 2899
BseMI GCAATG 3 cut(s) 161, 1408, 2520
BseMII CTCAG 7 cut(s) 546, 878, 1053, 1316, 1561, 1772, 2232
BseNI ACTGG 7 cut(s) 12, 172, 688, 957, 1265, 1450, 1933
BseRI GAGGAG 2 cut(s) 233, 1844
BseYI CCCAGC 1 cut(s) 1134
BsgI GTGCAG 1 cut(s) 2284
BshFI GGCC 5 cut(s) 143, 1119, 1172, 2149, 2704
BshTI ACCGGT 1 cut(s) 2229
BshVI ATCGAT 1 cut(s) 413
BsiHKAI GWGCWC 2 cut(s) 345, 2167
BsiHKCI CYCGRG 1 cut(s) 2586
BsiSI CCGG 3 cut(s) 695, 2230, 2618
BslFI GGGAC 4 cut(s) 465, 1336, 1462, 1825
BslI CCNNNNNNNGG 5 cut(s) 560, 1165, 1237, 1832, 2899
BsmAI GTCTC 3 cut(s) 203, 1083, 1706
BsmBI CGTCTC 1 cut(s) 1083
BsmFI GGGAC 4 cut(s) 465, 1336, 1462, 1825
BsmI GAATGC 1 cut(s) 118
BsnI GGCC 5 cut(s) 143, 1119, 1172, 2149, 2704
Bso31I GGTCTC 1 cut(s) 203
BsoBI CYCGRG 1 cut(s) 2586
Bsp119I TTCGAA 1 cut(s) 2467
Bsp1286I GDGCHC 3 cut(s) 345, 1350, 2167
Bsp1407I TGTACA 1 cut(s) 2473
Bsp143I GATC 7 cut(s) 172, 1530, 1724, 2056, 2356, 2713, 2788
BspACI CCGC 5 cut(s) 191, 213, 1293, 2594, 2697
BspANI GGCC 5 cut(s) 143, 1119, 1172, 2149, 2704
BspCNI CTCAG 7 cut(s) 547, 879, 1054, 1315, 1560, 1771, 2233
BspDI ATCGAT 1 cut(s) 413
BspHI TCATGA 2 cut(s) 1281, 2449
BspLI GGNNCC 4 cut(s) 745, 760, 1450, 2321
BspMAI CTGCAG 2 cut(s) 34, 44
BspOI GCTAGC 1 cut(s) 1736
BspPI GGATC 3 cut(s) 167, 1538, 2708
BspQI GCTCTTC 2 cut(s) 333, 2034
BspT104I TTCGAA 1 cut(s) 2467
BspTNI GGTCTC 1 cut(s) 203
BsrDI GCAATG 3 cut(s) 161, 1408, 2520
BsrFI RCCGGY 1 cut(s) 2229
BsrGI TGTACA 1 cut(s) 2473
BsrI ACTGG 7 cut(s) 12, 172, 688, 957, 1265, 1450, 1933
BssAI RCCGGY 1 cut(s) 2229
BssECI CCNNGG 5 cut(s) 844, 1255, 1351, 2218, 2304
BssMI GATC 7 cut(s) 172, 1530, 1724, 2056, 2356, 2713, 2788
BssNAI GTATAC 3 cut(s) 1467, 1750, 1823
BssT1I CCWWGG 3 cut(s) 844, 1351, 2218
Bst1107I GTATAC 3 cut(s) 1467, 1750, 1823
Bst2UI CCWGG 1 cut(s) 1673
Bst4CI ACNGT 8 cut(s) 777, 1193, 1256, 1327, 1422, 1588, 1891, 2846
Bst6I CTCTTC 5 cut(s) 333, 844, 1086, 2034, 2173
BstAUI TGTACA 1 cut(s) 2473
BstBI TTCGAA 1 cut(s) 2467
BstC8I GCNNGC 3 cut(s) 40, 1017, 1734
BstDEI CTNAG 8 cut(s) 555, 608, 887, 1062, 1302, 1547, 1758, 2241
BstDSI CCRYGG 1 cut(s) 1255
BstF5I GGATG 3 cut(s) 1681, 2210, 2929
BstH2I RGCGCY 1 cut(s) 110
BstHHI GCGC 1 cut(s) 109
BstKTI GATC 7 cut(s) 175, 1533, 1727, 2059, 2359, 2716, 2791
BstMAI GTCTC 3 cut(s) 203, 1083, 1706
BstMBI GATC 7 cut(s) 172, 1530, 1724, 2056, 2356, 2713, 2788
BstMWI GCNNNNNNNGC 6 cut(s) 35, 113, 1131, 1248, 1610, 1865
BstNI CCWGG 1 cut(s) 1673
BstPAI GACNNNNGTC 1 cut(s) 2112
BstSCI CCNGG 1 cut(s) 1671
BstSFI CTRYAG 2 cut(s) 30, 40
BstV2I GAAGAC 2 cut(s) 1654, 2146
BstX2I RGATCY 3 cut(s) 1530, 1724, 2056
BstYI RGATCY 3 cut(s) 1530, 1724, 2056
BstZ17I GTATAC 3 cut(s) 1467, 1750, 1823
Bsu15I ATCGAT 1 cut(s) 413
Bsu36I CCTNAGG 1 cut(s) 1302
BsuI GTATCC 1 cut(s) 684
BsuRI GGCC 5 cut(s) 143, 1119, 1172, 2149, 2704
BsuTUI ATCGAT 1 cut(s) 413
BtgI CCRYGG 1 cut(s) 1255
BtrI CACGTC 1 cut(s) 1652
BtsCI GGATG 3 cut(s) 1681, 2210, 2929
BtsI GCAGTG 2 cut(s) 187, 1210
BtsIMutI CAGTG 6 cut(s) 5, 187, 681, 773, 1210, 1870
Cac8I GCNNGC 3 cut(s) 40, 1017, 1734
CciI TCATGA 2 cut(s) 1281, 2449
CfoI GCGC 1 cut(s) 109
Cfr10I RCCGGY 1 cut(s) 2229
Cfr13I GGNCC 7 cut(s) 398, 1298, 1355, 1449, 1844, 2063, 2147
ClaI ATCGAT 1 cut(s) 413
Csp6I GTAC 3 cut(s) 1836, 2474, 2907
CspAI ACCGGT 1 cut(s) 2229
CviAII CATG 6 cut(s) 177, 224, 1282, 2450, 2578, 2768
CviQI GTAC 3 cut(s) 1836, 2474, 2907
DdeI CTNAG 8 cut(s) 555, 608, 887, 1062, 1302, 1547, 1758, 2241
DpnI GATC 7 cut(s) 174, 1532, 1726, 2058, 2358, 2715, 2790
DpnII GATC 7 cut(s) 172, 1530, 1724, 2056, 2356, 2713, 2788
DraI TTTAAA 1 cut(s) 570
EaeI YGGCCR 2 cut(s) 141, 1170
Eam1104I CTCTTC 5 cut(s) 333, 844, 1086, 2034, 2173
EarI CTCTTC 5 cut(s) 333, 844, 1086, 2034, 2173
Ecl136II GAGCTC 1 cut(s) 343
Eco130I CCWWGG 3 cut(s) 844, 1351, 2218
Eco24I GRGCYC 2 cut(s) 345, 1350
Eco31I GGTCTC 1 cut(s) 203
Eco47I GGWCC 6 cut(s) 398, 1298, 1355, 1449, 1844, 2063
Eco47III AGCGCT 1 cut(s) 108
Eco53kI GAGCTC 1 cut(s) 343
Eco57I CTGAAG 6 cut(s) 117, 1165, 1200, 1485, 2111, 2866
Eco81I CCTNAGG 1 cut(s) 1302
Eco88I CYCGRG 1 cut(s) 2586
EcoICRI GAGCTC 1 cut(s) 343
EcoO109I RGGNCCY 1 cut(s) 398
EcoRI GAATTC 1 cut(s) 1877
EcoRII CCWGG 1 cut(s) 1671
EcoT14I CCWWGG 3 cut(s) 844, 1351, 2218
EcoT38I GRGCYC 2 cut(s) 345, 1350
ErhI CCWWGG 3 cut(s) 844, 1351, 2218
Esp3I CGTCTC 1 cut(s) 1083
FaeI CATG 6 cut(s) 180, 227, 1285, 2453, 2581, 2771
FaqI GGGAC 4 cut(s) 465, 1336, 1462, 1825
FatI CATG 6 cut(s) 176, 223, 1281, 2449, 2577, 2767
FauI CCCGC 1 cut(s) 2587
FauNDI CATATG 1 cut(s) 1005
FbaI TGATCA 1 cut(s) 2356
FblI GTMKAC 4 cut(s) 1210, 1466, 1749, 1822
FokI GGATG 3 cut(s) 1688, 2197, 2936
FriOI GRGCYC 2 cut(s) 345, 1350
GlaI GCGC 1 cut(s) 108
GsaI CCCAGC 1 cut(s) 1138
GsuI CTGGAG 1 cut(s) 2360
HaeII RGCGCY 1 cut(s) 110
HaeIII GGCC 5 cut(s) 143, 1119, 1172, 2149, 2704
HapII CCGG 3 cut(s) 695, 2230, 2618
HhaI GCGC 1 cut(s) 109
Hin1II CATG 6 cut(s) 180, 227, 1285, 2453, 2581, 2771
Hin6I GCGC 1 cut(s) 107
HinP1I GCGC 1 cut(s) 107
HincII GTYRAC 2 cut(s) 1141, 2865
HindII GTYRAC 2 cut(s) 1141, 2865
HindIII AAGCTT 3 cut(s) 719, 1592, 2126
HpaII CCGG 3 cut(s) 695, 2230, 2618
HphI GGTGA 6 cut(s) 182, 490, 626, 2797, 2837, 2990
HpyCH4III ACNGT 8 cut(s) 777, 1193, 1256, 1327, 1422, 1588, 1891, 2846
HpyCH4IV ACGT 4 cut(s) 866, 1651, 2404, 2779
HpyF10VI GCNNNNNNNGC 6 cut(s) 35, 113, 1131, 1248, 1610, 1865
HpyF3I CTNAG 8 cut(s) 555, 608, 887, 1062, 1302, 1547, 1758, 2241
HpySE526I ACGT 4 cut(s) 866, 1651, 2404, 2779
Hsp92II CATG 6 cut(s) 180, 227, 1285, 2453, 2581, 2771
HspAI GCGC 1 cut(s) 107
Ksp22I TGATCA 1 cut(s) 2356
Kzo9I GATC 7 cut(s) 172, 1530, 1724, 2056, 2356, 2713, 2788
LguI GCTCTTC 2 cut(s) 333, 2034
LmnI GCTCC 3 cut(s) 331, 2309, 2325
LweI GCATC 6 cut(s) 419, 441, 1442, 2216, 2395, 2914
MaeII ACGT 4 cut(s) 866, 1651, 2404, 2779
MaeIII GTNAC 6 cut(s) 3, 735, 1372, 2236, 2495, 2794
MalI GATC 7 cut(s) 174, 1532, 1726, 2058, 2358, 2715, 2790
MboI GATC 7 cut(s) 172, 1530, 1724, 2056, 2356, 2713, 2788
MfeI CAATTG 2 cut(s) 2198, 2601
MflI RGATCY 3 cut(s) 1530, 1724, 2056
MhlI GDGCHC 3 cut(s) 345, 1350, 2167
MlsI TGGCCA 1 cut(s) 1172
MluNI TGGCCA 1 cut(s) 1172
MlyI GAGTC 5 cut(s) 781, 986, 1073, 2359, 2504
MmeI TCCRAC 2 cut(s) 502, 945
Mox20I TGGCCA 1 cut(s) 1172
MroXI GAANNNNTTC 1 cut(s) 1498
MscI TGGCCA 1 cut(s) 1172
MslI CAYNNNNRTG 4 cut(s) 228, 1008, 2481, 2559
Msp20I TGGCCA 1 cut(s) 1172
MspA1I CMGCKG 1 cut(s) 2697
MspI CCGG 3 cut(s) 695, 2230, 2618
MspR9I CCNGG 1 cut(s) 1673
MunI CAATTG 2 cut(s) 2198, 2601
Mva1269I GAATGC 1 cut(s) 118
MvaI CCWGG 1 cut(s) 1673
MwoI GCNNNNNNNGC 6 cut(s) 35, 113, 1131, 1248, 1610, 1865
NdeI CATATG 1 cut(s) 1005
NdeII GATC 7 cut(s) 172, 1530, 1724, 2056, 2356, 2713, 2788
NheI GCTAGC 1 cut(s) 1732
NlaIII CATG 6 cut(s) 180, 227, 1285, 2453, 2581, 2771
NlaIV GGNNCC 4 cut(s) 745, 760, 1450, 2321
NmuCI GTSAC 3 cut(s) 3, 1372, 2236
NspV TTCGAA 1 cut(s) 2467
PagI TCATGA 2 cut(s) 1281, 2449
PciSI GCTCTTC 2 cut(s) 333, 2034
PctI GAATGC 1 cut(s) 118
PdmI GAANNNNTTC 1 cut(s) 1498
PfeI GAWTC 5 cut(s) 269, 619, 908, 2295, 2456
PfoI TCCNGGA 1 cut(s) 1671
PinAI ACCGGT 1 cut(s) 2229
PleI GAGTC 5 cut(s) 781, 986, 1072, 2358, 2504
PpsI GAGTC 5 cut(s) 781, 986, 1072, 2358, 2504
PpuMI RGGWCCY 1 cut(s) 398
PshAI GACNNNNGTC 1 cut(s) 2112
Psp124BI GAGCTC 1 cut(s) 345
Psp5II RGGWCCY 1 cut(s) 398
Psp6I CCWGG 1 cut(s) 1671
PspFI CCCAGC 1 cut(s) 1134
PspGI CCWGG 1 cut(s) 1671
PspN4I GGNNCC 4 cut(s) 745, 760, 1450, 2321
PspPI GGNCC 7 cut(s) 398, 1298, 1355, 1449, 1844, 2063, 2147
PspPPI RGGWCCY 1 cut(s) 398
PstI CTGCAG 2 cut(s) 34, 44
PsuI RGATCY 3 cut(s) 1530, 1724, 2056
RsaI GTAC 3 cut(s) 1837, 2475, 2908
RsaNI GTAC 3 cut(s) 1836, 2474, 2907
RseI CAYNNNNRTG 4 cut(s) 228, 1008, 2481, 2559
SacI GAGCTC 1 cut(s) 345
SapI GCTCTTC 2 cut(s) 333, 2034
Sau3AI GATC 7 cut(s) 172, 1530, 1724, 2056, 2356, 2713, 2788
Sau96I GGNCC 7 cut(s) 398, 1298, 1355, 1449, 1844, 2063, 2147
SchI GAGTC 5 cut(s) 781, 986, 1073, 2359, 2504
ScrFI CCNGG 1 cut(s) 1673
SduI GDGCHC 3 cut(s) 345, 1350, 2167
SfaNI GCATC 6 cut(s) 419, 441, 1442, 2216, 2395, 2914
SfcI CTRYAG 2 cut(s) 30, 40
SfuI TTCGAA 1 cut(s) 2467
SinI GGWCC 6 cut(s) 398, 1298, 1355, 1449, 1844, 2063
SmiMI CAYNNNNRTG 4 cut(s) 228, 1008, 2481, 2559
SmlI CTYRAG 1 cut(s) 1568
SmoI CTYRAG 1 cut(s) 1568
SsiI CCGC 5 cut(s) 191, 213, 1293, 2594, 2697
SspI AATATT 3 cut(s) 136, 657, 901
SstI GAGCTC 1 cut(s) 345
StyD4I CCNGG 1 cut(s) 1671
StyI CCWWGG 3 cut(s) 844, 1351, 2218
TaaI ACNGT 8 cut(s) 777, 1193, 1256, 1327, 1422, 1588, 1891, 2846
TaiI ACGT 4 cut(s) 869, 1654, 2407, 2782
TaqI TCGA 2 cut(s) 413, 2467
TaqII GACCGA 1 cut(s) 1397
TatI WGTACW 2 cut(s) 2473, 2906
TfiI GAWTC 5 cut(s) 269, 619, 908, 2295, 2456
TscAI CASTG 6 cut(s) 12, 187, 688, 780, 1210, 1870
TseFI GTSAC 3 cut(s) 3, 1372, 2236
Tsp45I GTSAC 3 cut(s) 3, 1372, 2236
TspGWI ACGGA 1 cut(s) 1720
TspRI CASTG 6 cut(s) 12, 187, 688, 780, 1210, 1870
VpaK11BI GGWCC 6 cut(s) 398, 1298, 1355, 1449, 1844, 2063
XapI RAATTY 5 cut(s) 1598, 1877, 2284, 2707, 2819
XbaI TCTAGA 2 cut(s) 871, 2683
XcmI CCANNNNNNNNNTGG 1 cut(s) 2819
XmiI GTMKAC 4 cut(s) 1210, 1466, 1749, 1822
XmnI GAANNNNTTC 1 cut(s) 1498
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.