Rh2DG333100
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
42547492 .. 42548175
684 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG333100.1

Sequence Viewer

Length: 528 bp
ATGCGTGGACACTTGACACAGAAGACTGATGTGTTTGCCTTTGGTGTTCTTGCTCTAGAAATTGTCAGTGGTAGGCCAAATTCTGACCGGAGCTTGGATGGCGAGATGATTTATCTTCTCGAATGGGCTTGGCACTTGCATGAAAACAAACGCGAAGTTGAACTAGTGGACTCTAGGTTATCAGAATTCAATGAGGAAGAGGCAAGACGAATAACCAAGATAGGACTTTTGTGCACTCAAACATCACCAGTGCAACGACCACCGATGTCGCGTGTGGTGGGAATGCTTTCAGGAGATATTGAAGTAATGACAGTAACTTCAAAGCCTAGTTACTTGACAGACTGGGAATTTGACGATACAAGTACTTTCACCAGTCTAGCCACTGATATGTCAGCAAAAGGAACTGATCCGAGCTTTTACAACTCACCGGCGAGTACAAGCACTTTGGGGGATCCAGGGCAGCTTTCTAAAAATGCCACGGATGCCTTGCTTCATAATGTTGTTGATACCCAATCCCTACCGACTTAA

Protein Analysis

175

Amino Acids

19.4

Weight (kDa)

4.75

Isoelectric Point (pI)

47.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 153, 271
AclWI GGATC 3 cut(s) 401, 446, 459
AcsI RAATTY 3 cut(s) 79, 185, 347
AfaI GTAC 2 cut(s) 364, 436
AfiI CCNNNNNNNGG 1 cut(s) 94
AgsI TTSAA 4 cut(s) 161, 190, 302, 321
AhlI ACTAGT 1 cut(s) 163
AjnI CCWGG 1 cut(s) 454
AluBI AGCT 3 cut(s) 93, 414, 463
AluI AGCT 3 cut(s) 93, 414, 463
Alw21I GWGCWC 1 cut(s) 236
Alw44I GTGCAC 1 cut(s) 232
AlwI GGATC 3 cut(s) 401, 446, 459
AoxI GGCC 1 cut(s) 74
ApaLI GTGCAC 1 cut(s) 232
ApeKI GCWGC 1 cut(s) 460
ApoI RAATTY 3 cut(s) 79, 185, 347
ArsI GACNNNNNNTTYG 2 cut(s) 332, 364
Asp700I GAANNNNTTC 1 cut(s) 286
AsuHPI GGTGA 3 cut(s) 237, 361, 417
BaeGI GKGCMC 1 cut(s) 236
BamHI GGATCC 1 cut(s) 451
BbsI GAAGAC 1 cut(s) 29
Bbv12I GWGCWC 1 cut(s) 236
BbvI GCAGC 1 cut(s) 472
BccI CCATC 1 cut(s) 92
BciT130I CCWGG 1 cut(s) 456
BcuI ACTAGT 1 cut(s) 163
BfaI CTAG 5 cut(s) 56, 164, 174, 327, 377
BisI GCNGC 1 cut(s) 461
BlsI GCNGC 1 cut(s) 462
BmcAI AGTACT 1 cut(s) 364
Bme1390I CCNGG 1 cut(s) 456
BmiI GGNNCC 1 cut(s) 453
BmrFI CCNGG 1 cut(s) 456
BmrI ACTGGG 1 cut(s) 352
BmsI GCATC 1 cut(s) 472
BmuI ACTGGG 1 cut(s) 352
BpiI GAAGAC 1 cut(s) 29
BsaJI CCNNGG 2 cut(s) 455, 477
BsaWI WCCGGW 1 cut(s) 87
Bsc4I CCNNNNNNNGG 1 cut(s) 94
Bse118I RCCGGY 1 cut(s) 427
Bse1I ACTGG 3 cut(s) 248, 347, 372
BseBI CCWGG 1 cut(s) 456
BseDI CCNNGG 2 cut(s) 455, 477
BseGI GGATG 2 cut(s) 103, 487
BseLI CCNNNNNNNGG 1 cut(s) 94
BseNI ACTGG 3 cut(s) 248, 347, 372
BseSI GKGCMC 1 cut(s) 236
BseXI GCAGC 1 cut(s) 472
Bsh1236I CGCG 2 cut(s) 153, 271
BshFI GGCC 1 cut(s) 76
BsiHKAI GWGCWC 1 cut(s) 236
BsiSI CCGG 2 cut(s) 88, 428
BslI CCNNNNNNNGG 1 cut(s) 94
BsmI GAATGC 1 cut(s) 288
BsnI GGCC 1 cut(s) 76
Bsp1286I GDGCHC 1 cut(s) 236
Bsp143I GATC 2 cut(s) 406, 451
BspANI GGCC 1 cut(s) 76
BspFNI CGCG 2 cut(s) 153, 271
BspLI GGNNCC 1 cut(s) 453
BspPI GGATC 3 cut(s) 401, 446, 459
BsrFI RCCGGY 1 cut(s) 427
BsrI ACTGG 3 cut(s) 248, 347, 372
BssAI RCCGGY 1 cut(s) 427
BssECI CCNNGG 2 cut(s) 455, 477
BssMI GATC 2 cut(s) 406, 451
Bst2UI CCWGG 1 cut(s) 456
Bst4CI ACNGT 1 cut(s) 313
Bst6I CTCTTC 1 cut(s) 192
BstDSI CCRYGG 1 cut(s) 477
BstF5I GGATG 2 cut(s) 103, 487
BstFNI CGCG 2 cut(s) 153, 271
BstKTI GATC 2 cut(s) 409, 454
BstMBI GATC 2 cut(s) 406, 451
BstMWI GCNNNNNNNGC 2 cut(s) 99, 482
BstNI CCWGG 1 cut(s) 456
BstSCI CCNGG 1 cut(s) 454
BstSLI GKGCMC 1 cut(s) 236
BstUI CGCG 2 cut(s) 153, 271
BstV1I GCAGC 1 cut(s) 472
BstV2I GAAGAC 1 cut(s) 29
BstX2I RGATCY 1 cut(s) 451
BstYI RGATCY 1 cut(s) 451
BsuRI GGCC 1 cut(s) 76
BtgI CCRYGG 1 cut(s) 477
BtsCI GGATG 2 cut(s) 103, 487
BtsIMutI CAGTG 3 cut(s) 73, 255, 381
Cfr10I RCCGGY 1 cut(s) 427
Csp6I GTAC 2 cut(s) 363, 435
CviAII CATG 1 cut(s) 140
CviJI RGCY 7 cut(s) 76, 93, 128, 325, 380, 414, 463
CviKI_1 RGCY 7 cut(s) 76, 93, 128, 325, 380, 414, 463
CviQI GTAC 2 cut(s) 363, 435
DpnI GATC 2 cut(s) 408, 453
DpnII GATC 2 cut(s) 406, 451
Eam1104I CTCTTC 1 cut(s) 192
EarI CTCTTC 1 cut(s) 192
EcoRI GAATTC 1 cut(s) 185
EcoRII CCWGG 1 cut(s) 454
FaeI CATG 1 cut(s) 143
FaiI YATR 3 cut(s) 141, 389, 495
FatI CATG 1 cut(s) 139
Fnu4HI GCNGC 1 cut(s) 461
FokI GGATG 2 cut(s) 110, 494
Fsp4HI GCNGC 1 cut(s) 461
FspBI CTAG 5 cut(s) 56, 164, 174, 327, 377
GluI GCNGC 1 cut(s) 461
HaeIII GGCC 1 cut(s) 76
HapII CCGG 2 cut(s) 88, 428
Hin1II CATG 1 cut(s) 143
HinfI GANTC 1 cut(s) 170
HpaII CCGG 2 cut(s) 88, 428
HphI GGTGA 3 cut(s) 237, 361, 417
Hpy166II GTNNAC 3 cut(s) 8, 169, 234
Hpy188I TCNGA 3 cut(s) 85, 184, 411
Hpy188III TCNNGA 3 cut(s) 56, 119, 291
Hpy8I GTNNAC 3 cut(s) 8, 169, 234
HpyCH4III ACNGT 1 cut(s) 313
HpyCH4V TGCA 3 cut(s) 139, 234, 253
HpyF10VI GCNNNNNNNGC 2 cut(s) 99, 482
Hsp92II CATG 1 cut(s) 143
Kzo9I GATC 2 cut(s) 406, 451
LmnI GCTCC 1 cut(s) 90
LpnPI CCDG 8 cut(s) 101, 261, 276, 328, 385, 441, 441, 468
Lsp1109I GCAGC 1 cut(s) 472
LweI GCATC 1 cut(s) 472
MaeI CTAG 5 cut(s) 56, 164, 174, 327, 377
MaeIII GTNAC 2 cut(s) 313, 329
MalI GATC 2 cut(s) 408, 453
MboI GATC 2 cut(s) 406, 451
MboII GAAGA 3 cut(s) 34, 107, 209
MflI RGATCY 1 cut(s) 451
MhlI GDGCHC 1 cut(s) 236
MluCI AATT 4 cut(s) 60, 79, 185, 347
MlyI GAGTC 1 cut(s) 164
MnlI CCTC 2 cut(s) 187, 193
MroXI GAANNNNTTC 1 cut(s) 286
MseI TTAA 1 cut(s) 526
MslI CAYNNNNRTG 2 cut(s) 138, 386
MspI CCGG 2 cut(s) 88, 428
MspR9I CCNGG 1 cut(s) 456
Mva1269I GAATGC 1 cut(s) 288
MvaI CCWGG 1 cut(s) 456
MvnI CGCG 2 cut(s) 153, 271
MwoI GCNNNNNNNGC 2 cut(s) 99, 482
NdeII GATC 2 cut(s) 406, 451
NlaIII CATG 1 cut(s) 143
NlaIV GGNNCC 1 cut(s) 453
PctI GAATGC 1 cut(s) 288
PdmI GAANNNNTTC 1 cut(s) 286
PkrI GCNGC 1 cut(s) 462
PleI GAGTC 1 cut(s) 164
PpsI GAGTC 1 cut(s) 164
Psp6I CCWGG 1 cut(s) 454
PspGI CCWGG 1 cut(s) 454
PspN4I GGNNCC 1 cut(s) 453
PsuI RGATCY 1 cut(s) 451
RsaI GTAC 2 cut(s) 364, 436
RsaNI GTAC 2 cut(s) 363, 435
RseI CAYNNNNRTG 2 cut(s) 138, 386
SaqAI TTAA 1 cut(s) 526
SatI GCNGC 1 cut(s) 461
Sau3AI GATC 2 cut(s) 406, 451
ScaI AGTACT 1 cut(s) 364
SchI GAGTC 1 cut(s) 164
ScrFI CCNGG 1 cut(s) 456
SduI GDGCHC 1 cut(s) 236
SetI ASST 4 cut(s) 95, 179, 416, 465
SfaNI GCATC 1 cut(s) 472
SgrAI CRCCGGYG 1 cut(s) 427
SmiMI CAYNNNNRTG 2 cut(s) 138, 386
SpeI ACTAGT 1 cut(s) 163
Sse9I AATT 4 cut(s) 60, 79, 185, 347
SspMI CTAG 5 cut(s) 56, 164, 174, 327, 377
StyD4I CCNGG 1 cut(s) 454
TaaI ACNGT 1 cut(s) 313
TaqI TCGA 1 cut(s) 120
TasI AATT 4 cut(s) 60, 79, 185, 347
TatI WGTACW 2 cut(s) 362, 434
Tru1I TTAA 1 cut(s) 526
Tru9I TTAA 1 cut(s) 526
TscAI CASTG 3 cut(s) 73, 255, 388
TseI GCWGC 1 cut(s) 460
TspDTI ATGAA 2 cut(s) 156, 482
TspGWI ACGGA 1 cut(s) 494
TspRI CASTG 3 cut(s) 73, 255, 388
VneI GTGCAC 1 cut(s) 232
XapI RAATTY 3 cut(s) 79, 185, 347
XbaI TCTAGA 1 cut(s) 55
XmnI GAANNNNTTC 1 cut(s) 286
XspI CTAG 5 cut(s) 56, 164, 174, 327, 377
ZrmI AGTACT 1 cut(s) 364
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.