Rw5G012180

Di-glucose binding within endoplasmic reticulum

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
14256116 .. 14264943
8828 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G012180.1

Sequence Viewer

Length: 3120 bp
ATGAAGCATTCTTCTCTTTCATTACTATGCTTCTGCCTAGGCTATCTGGGTAGTTTCTGGTTTCACGTTTCCATGGCTCAAAATGCTACAAATGCTACTACGGACCCATCTGAAGTGTCGGCTTTGAACTCGATCTTCCAACAGTGGGGAGCACAGTCCGTGGCGCTGTGGAATATCAGTGGAGAGCCATGCAGTGGATCAGCCATCAATGGAACTGAATTTGAGAGCCCTCCTAATAACCCTGCCATTACATGTGATTGTACCTTTGACAATAGTACCACCTGCCATATTACCCAACTGAGAGTTTATGCTCTAGACAAAACAGGAAGGTTTCCAGAAGAGCTTTTGGCTTTGAAATATCTGAACTTTTTGAAAATAGATCAGAACTTTTTCACAGGTCCCTTACCCGCATGGATTGGCAATATGTCTGCACTCACGTTGTTGTCAATTGCCCACAATGCATTCTCTGGGCCGATCCCCAAGGAACTCGGAAATCTGAAGGACCTAACTGTGCTGTCCTTTGGATCAAATAATTTCTCTGGAACACTCCCTCCAGGACTTGGTAATCTAACCAAGCTTGAGCAACTTTACATAAACAGCTGTGGACTTACTGGTGAAATTCCTTCAACATTTGCTAACCTTCGTAACATGCTAGTCCTTTGGGCATCAGACACTCCTTTCTCTGGAAAGATACCTGATTTCATTGGGAATTGGACGAAGCTAAACTCACTGAGACTTCAAGGAAACTCTTTAGAAGGCCCAATACCAACCAATTTTTCTCAGTTGACCTCATTGAATTCTCTGCGAATCAGTGATATATACAATGGGAGCTCCTCTCTTGGTTTCATAAAAAATTTGAAGAACTTGACTGATTTAGTTCTACGAAATGCATTGATTACCGGTAGCCTACCTTCTGATATTGCAGAATATCCAAGTTTACAGATACTGGATTTGAGTTTCAACAATTTGACAGGCCAACTCCCAAACGGCTTGTTCAACATGAGTTCTCTTACATACTTATTTCTTGGGAACAATAGTCTGTCTGGATCACTTCCTAACCAAAAGACCAGTATACTTCAGAACGTAGACTTGTCTTACAACTATTTATCAGGGAGTCTTCCTCCATGGGTAACCTCAACAGCGCAACTGAACTTAGTGGTGAACAACTTCACCTTTGACAGTTCAAACACAACTCTTCCTGGGTTGAATTGCCTTCAGAGAAATTTTCCATGCAATAGAAATGCCCCACGATATGCAAATTTTTCAATCAAGTGTGGTGGACAAGAACTTAGAGGAAGTGATGGTATATTGTATGAGGCAGAAAACTCAACTCTTGGCTCAGCTACATTTAGTGTAACCAGTACAGAGAAATGGGCGGTAAGCAATGTGGGTATGTTTGCTGACAGAAAGAATCCAGACTATGTGGTGAATACCCTGGCACAAGTCACTGGGACAGATGTGACCCCAGAGCTTTTCCAGACCTCAAGATTGTCTCCCGGATCGCTGAGGTACTTCGGCCTGGGTCTGGAGAATGGGCCTTATACTGTAACATTGCAATTTGCAGAAACGGTTTTTTTAGATCGTACCAGACAAACATGGAAAAGTCTTGGTCGGCGCCTATTTGATATCTATATTCAGGGGGATCTAAAATGGAAGGACTTTGACATCTCGAAGGAGGCAGGTGGAGTTTTCAGAGCTGTTGCTAGAAACTTCAATGTTAATGTGTCAGAAAATCATCTTGACATTCATCTGTTCTGGGCTGGTAAGGGGACCTGCTGCATACCCGAACAAGGTGATTATGGCCCTCTAATATCAGCGGTTAAAGTTGTTCCAGAATTTACTCCAACTGTTTCTGGGATTCCACCAACTACTCCAGGAAAGAAGAGCAACACAGGACTGATAGTTGGTATTGCAGTTCCTCTTGGAGTTGTGGGCTTGCTGTTAATATTTTCAGTTCTATATTTGAGGAGGAAAAAAGCAGAAAAATATGACGATGAAGACCTTCTAGCACTAGAGAACAGACCAAATACTTTCAGTTATTCCGAGTTGAAAGAAGCAACAGAAGATTTTAATCCTTCAAATAAGCTAGGAGAGGGAGGATATGGCCCTGTTTACAAGGGTACACTTTCCGATGGGAGGGTAGTGGCTGTGAAGCAACTTTCAGTGGCATCTCACCAAGGGAAGAGTCAATTTGGTGCAGAAATTGCTACTATATCTGCAGTGCAACATCGCAATCTAGTGAAATTGTATGGATGCTGTATCGAAGGAAGCCAGCGAATTTTGGTTTATGAATATCTTGAAAACAAGAGCCTTGATCAAGCTCTTTTTGGAAAAAATGACCTGCACCTTGACTGGCTTACACGCTTCAATATAATGTTGGGAACAGCAAGAGGACTTGCTTATCTTCATGAGGAGTCAAGCCCAAGGATTGTGCATAGAGATGTCAAAGCCAGTAATATTTTGCTCGATGCAGAACTCTGCCCAAAAATATCAGATTTTGGATTAGCAAAGCTATATGATGATGACAAAACCCATATCAGTACCCGAGTTGCAGGGACAATAGGCTATTTGGCACCAGAGTATGCAATGCGTGGACATCTGACCGAAAAGGCTGATGTTTTCAGTTTTGGGGTTGTTGTTTTGGAGATTCTCAGCGGAAGACCAAATGCTGACAGTGATTTGGATGCTGGAAAGACTTATCTCCTTGAATGGGCTTGGACTCTGCATGAAAATAACAAGACTTTGGAGTTGGTGGATCCCAGATTGACAGATTTTGATGATCAAGAAGCCATTAGGTTCATAAAAGTAGCTTTCCAATGCACACAGGGACCGCCAATGACGCGGCCATCTATGTCACGCGTTGTTGGGATGCTTTCTGGAGATATTGAAGTAGGCAGCACTGTCATGTCAAAGCCAAGTTATTTGACAGATTGGGACTATAAAGATGTAACAACAAGTAGCTTTTTGATTGATCGCGATACACCATCAACTGATAGTAAGAGTGAGCTCAACCTTCAGCCCGGCAGCACAACTGGTGCTAGCACCGATATTGACCTTTATCCATCTCATGTGGAAGTTAATCGATCAATGGTCACCGACATTATAAGAGAAGGAAGGTAA

Protein Analysis

1039

Amino Acids

114.05

Weight (kDa)

5.4

Isoelectric Point (pI)

30.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 92 - 198 2.7e-08 Leucine-rich repeat region
LRR_14 PF23598 182 - 270 2.3e-07 Leucine-rich repeat region
Malectin PF11721 421 - 607 6.8e-38 Malectin domain
Pkinase PF00069 692 - 954 5.7e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 693 - 955 1.6e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3104
AarI CACCTGC 2 cut(s) 290, 1670
Acc36I ACCTGC 4 cut(s) 290, 1670, 1781, 2349
AccB1I GGYRCC 2 cut(s) 1614, 2572
AccB7I CCANNNNNTGG 2 cut(s) 194, 560
AccI GTMKAC 2 cut(s) 1072, 1086
AccII CGCG 3 cut(s) 2842, 2859, 2976
AciI CCGC 6 cut(s) 408, 1376, 1817, 2655, 2831, 2842
AclWI GGATC 8 cut(s) 205, 469, 532, 1054, 1507, 1650, 2750, 2763
AcoI YGGCCR 1 cut(s) 2843
AcsI RAATTY 8 cut(s) 218, 618, 796, 853, 1222, 1258, 1835, 2277
AcuI CTGAAG 5 cut(s) 132, 518, 1061, 1199, 2999
AcyI GRCGYC 1 cut(s) 1615
AfaI GTAC 7 cut(s) 262, 277, 1363, 1511, 1585, 2122, 2542
AfiI CCNNNNNNNGG 8 cut(s) 145, 194, 560, 683, 1525, 1790, 2136, 2710
AflIII ACRYGT 2 cut(s) 251, 2857
AgeI ACCGGT 1 cut(s) 899
AjnI CCWGG 5 cut(s) 553, 1198, 1434, 1518, 1873
AjuI GAANNNNNNNTTGG 2 cut(s) 760, 792
AloI GAACNNNNNNTCC 2 cut(s) 535, 567
Alw21I GWGCWC 3 cut(s) 154, 833, 3009
Alw26I GTCTC 2 cut(s) 727, 1497
AlwI GGATC 8 cut(s) 205, 469, 532, 1054, 1507, 1650, 2750, 2763
AlwNI CAGNNNCTG 1 cut(s) 946
Ama87I CYCGRG 1 cut(s) 2544
AoxI GGCC 8 cut(s) 470, 757, 973, 1516, 1535, 1801, 2104, 2843
ApeKI GCWGC 3 cut(s) 1776, 2895, 3024
ApoI RAATTY 8 cut(s) 218, 618, 796, 853, 1222, 1258, 1835, 2277
AsiGI ACCGGT 1 cut(s) 899
Asp700I GAANNNNTTC 3 cut(s) 389, 1166, 2001
AspA2I CCTAGG 1 cut(s) 37
AspLEI GCGC 3 cut(s) 166, 1144, 1617
AsuC2I CCSGG 2 cut(s) 1497, 3021
AsuHPI GGTGA 7 cut(s) 626, 1162, 1171, 1438, 1805, 2165, 3085
AsuNHI GCTAGC 1 cut(s) 3038
AvaI CYCGRG 1 cut(s) 2544
AvaII GGWCC 5 cut(s) 103, 398, 502, 1770, 2828
AvrII CCTAGG 1 cut(s) 37
BaeI ACNNNNGTAYC 2 cut(s) 259, 292
BamHI GGATCC 1 cut(s) 2755
BanI GGYRCC 2 cut(s) 1614, 2572
BanII GRGCYC 3 cut(s) 230, 833, 3009
BarI GAAGNNNNNNTAC 4 cut(s) 747, 779, 895, 927
BbsI GAAGAC 3 cut(s) 1109, 2004, 2665
Bbv12I GWGCWC 3 cut(s) 154, 833, 3009
BbvCI CCTCAGC 1 cut(s) 1505
BbvI GCAGC 3 cut(s) 1763, 2907, 3036
BccI CCATC 7 cut(s) 115, 212, 1295, 2126, 2854, 2992, 3070
BceAI ACGGC 1 cut(s) 1003
BciT130I CCWGG 5 cut(s) 555, 1200, 1436, 1520, 1875
BclI TGATCA 2 cut(s) 2314, 2779
BcnI CCSGG 2 cut(s) 1497, 3021
BcoDI GTCTC 2 cut(s) 727, 1497
BfaI CTAG 9 cut(s) 38, 314, 653, 1704, 2006, 2012, 2087, 2237, 3039
BfmI CTRYAG 1 cut(s) 2217
BfoI RGCGCY 2 cut(s) 167, 1618
BfuAI ACCTGC 4 cut(s) 290, 1670, 1781, 2349
BisI GCNGC 4 cut(s) 1777, 2843, 2896, 3025
BlnI CCTAGG 1 cut(s) 37
BlpI GCTNAGC 1 cut(s) 1339
BlsI GCNGC 4 cut(s) 1778, 2844, 2897, 3026
Bme1390I CCNGG 7 cut(s) 555, 1200, 1436, 1497, 1520, 1875, 3021
Bme18I GGWCC 5 cut(s) 103, 398, 502, 1770, 2828
BmeT110I CYCGRG 1 cut(s) 2544
BmiI GGNNCC 7 cut(s) 105, 400, 1616, 1771, 2574, 2757, 2829
BmrFI CCNGG 7 cut(s) 555, 1200, 1436, 1497, 1520, 1875, 3021
BmrI ACTGGG 1 cut(s) 1458
BmsI GCATC 6 cut(s) 674, 2177, 2243, 2458, 2674, 2859
BmtI GCTAGC 1 cut(s) 3042
BmuI ACTGGG 1 cut(s) 1458
BpiI GAAGAC 3 cut(s) 1109, 2004, 2665
BplI GAGNNNNNCTC 4 cut(s) 820, 852, 1105, 1137
BpmI CTGGAG 4 cut(s) 537, 1547, 1857, 2898
Bpu10I CCTNAGC 1 cut(s) 1505
Bpu1102I GCTNAGC 1 cut(s) 1339
BpuEI CTTGAG 2 cut(s) 599, 1468
BpuMI CCSGG 2 cut(s) 1497, 3021
Bsa29I ATCGAT 1 cut(s) 3082
BsaBI GATNNNNATC 1 cut(s) 2070
BsaHI GRCGYC 1 cut(s) 1615
BsaWI WCCGGW 1 cut(s) 899
BsaXI ACNNNNNCTCC 2 cut(s) 535, 565
Bsc4I CCNNNNNNNGG 8 cut(s) 145, 194, 560, 683, 1525, 1790, 2136, 2710
Bse118I RCCGGY 1 cut(s) 899
Bse1I ACTGG 8 cut(s) 616, 951, 1068, 1359, 1453, 2357, 2451, 3037
Bse3DI GCAATG 3 cut(s) 1390, 1550, 2592
Bse8I GATNNNNATC 1 cut(s) 2070
BseBI CCWGG 5 cut(s) 555, 1200, 1436, 1520, 1875
BseCI ATCGAT 1 cut(s) 3082
BseGI GGATG 3 cut(s) 2258, 2689, 2874
BseJI GATNNNNATC 1 cut(s) 2070
BseLI CCNNNNNNNGG 8 cut(s) 145, 194, 560, 683, 1525, 1790, 2136, 2710
BseMI GCAATG 3 cut(s) 1390, 1550, 2592
BseMII CTCAG 6 cut(s) 290, 722, 794, 1353, 1496, 2665
BseNI ACTGG 8 cut(s) 616, 951, 1068, 1359, 1453, 2357, 2451, 3037
BseRI GAGGAG 3 cut(s) 823, 1981, 2426
BseXI GCAGC 3 cut(s) 1763, 2907, 3036
BsgI GTGCAG 3 cut(s) 414, 2217, 2327
Bsh1236I CGCG 3 cut(s) 2842, 2859, 2976
BshFI GGCC 8 cut(s) 472, 759, 975, 1518, 1537, 1803, 2106, 2845
BshNI GGYRCC 2 cut(s) 1614, 2572
BshTI ACCGGT 1 cut(s) 899
BshVI ATCGAT 1 cut(s) 3082
BsiHKAI GWGCWC 3 cut(s) 154, 833, 3009
BsiHKCI CYCGRG 1 cut(s) 2544
BsiSI CCGG 3 cut(s) 900, 1497, 3021
BslFI GGGAC 6 cut(s) 384, 1465, 1783, 2569, 2841, 2948
BslI CCNNNNNNNGG 8 cut(s) 145, 194, 560, 683, 1525, 1790, 2136, 2710
BsmAI GTCTC 2 cut(s) 727, 1497
BsmFI GGGAC 6 cut(s) 384, 1465, 1783, 2569, 2841, 2948
BsmI GAATGC 2 cut(s) 7, 461
BsnI GGCC 8 cut(s) 472, 759, 975, 1518, 1537, 1803, 2106, 2845
BsoBI CYCGRG 1 cut(s) 2544
Bsp1286I GDGCHC 4 cut(s) 154, 230, 833, 3009
Bsp1720I GCTNAGC 1 cut(s) 1339
Bsp19I CCATGG 2 cut(s) 72, 1124
Bsp68I TCGCGA 1 cut(s) 2976
BspACI CCGC 6 cut(s) 408, 1376, 1817, 2655, 2831, 2842
BspANI GGCC 8 cut(s) 472, 759, 975, 1518, 1537, 1803, 2106, 2845
BspCNI CTCAG 6 cut(s) 291, 723, 793, 1352, 1497, 2664
BspDI ATCGAT 1 cut(s) 3082
BspFNI CGCG 3 cut(s) 2842, 2859, 2976
BspHI TCATGA 1 cut(s) 2407
BspLI GGNNCC 7 cut(s) 105, 400, 1616, 1771, 2574, 2757, 2829
BspMAI CTGCAG 1 cut(s) 2221
BspMI ACCTGC 4 cut(s) 290, 1670, 1781, 2349
BspOI GCTAGC 1 cut(s) 3042
BspPI GGATC 8 cut(s) 205, 469, 532, 1054, 1507, 1650, 2750, 2763
BspQI GCTCTTC 2 cut(s) 333, 1877
BspT107I GGYRCC 2 cut(s) 1614, 2572
BsrDI GCAATG 3 cut(s) 1390, 1550, 2592
BsrFI RCCGGY 1 cut(s) 899
BsrI ACTGG 8 cut(s) 616, 951, 1068, 1359, 1453, 2357, 2451, 3037
BssAI RCCGGY 1 cut(s) 899
BssNAI GTATAC 1 cut(s) 1073
BssNI GRCGYC 1 cut(s) 1615
BssT1I CCWWGG 6 cut(s) 37, 72, 480, 1124, 2176, 2423
Bst1107I GTATAC 1 cut(s) 1073
Bst2UI CCWGG 5 cut(s) 555, 1200, 1436, 1520, 1875
Bst4CI ACNGT 9 cut(s) 144, 156, 511, 1181, 1546, 1570, 1849, 2675, 2902
Bst6I CTCTTC 4 cut(s) 333, 1200, 1877, 2177
BstACI GRCGYC 1 cut(s) 1615
BstAPI GCANNNNNTGC 1 cut(s) 2204
BstC8I GCNNGC 3 cut(s) 1937, 2273, 3040
BstDEI CTNAG 8 cut(s) 299, 731, 780, 1153, 1289, 1339, 1505, 2651
BstDSI CCRYGG 3 cut(s) 72, 159, 1124
BstEII GGTNACC 2 cut(s) 1129, 3091
BstF5I GGATG 3 cut(s) 2258, 2689, 2874
BstFNI CGCG 3 cut(s) 2842, 2859, 2976
BstH2I RGCGCY 2 cut(s) 167, 1618
BstHHI GCGC 3 cut(s) 166, 1144, 1617
BstMAI GTCTC 2 cut(s) 727, 1497
BstMWI GCNNNNNNNGC 5 cut(s) 83, 92, 458, 2204, 2839
BstNI CCWGG 5 cut(s) 555, 1200, 1436, 1520, 1875
BstNSI RCATGY 2 cut(s) 255, 652
BstPI GGTNACC 2 cut(s) 1129, 3091
BstSCI CCNGG 7 cut(s) 553, 1198, 1434, 1495, 1518, 1873, 3019
BstSFI CTRYAG 1 cut(s) 2217
BstUI CGCG 3 cut(s) 2842, 2859, 2976
BstV1I GCAGC 3 cut(s) 1763, 2907, 3036
BstV2I GAAGAC 3 cut(s) 1109, 2004, 2665
BstX2I RGATCY 2 cut(s) 1642, 2755
BstYI RGATCY 2 cut(s) 1642, 2755
BstZ17I GTATAC 1 cut(s) 1073
Bsu15I ATCGAT 1 cut(s) 3082
BsuRI GGCC 8 cut(s) 472, 759, 975, 1518, 1537, 1803, 2106, 2845
BsuTUI ATCGAT 1 cut(s) 3082
BtgI CCRYGG 3 cut(s) 72, 159, 1124
BtgZI GCGATG 1 cut(s) 2213
BtsCI GGATG 3 cut(s) 2258, 2689, 2874
BtsI GCAGTG 2 cut(s) 199, 2226
BtuMI TCGCGA 1 cut(s) 2976
BveI ACCTGC 4 cut(s) 290, 1670, 1781, 2349
Cac8I GCNNGC 3 cut(s) 1937, 2273, 3040
CaiI CAGNNNCTG 1 cut(s) 946
CciI TCATGA 1 cut(s) 2407
CfoI GCGC 3 cut(s) 166, 1144, 1617
Cfr10I RCCGGY 1 cut(s) 899
ClaI ATCGAT 1 cut(s) 3082
CseI GACGC 1 cut(s) 2848
Csp6I GTAC 7 cut(s) 261, 276, 1362, 1510, 1584, 2121, 2541
CspAI ACCGGT 1 cut(s) 899
CspCI CAANNNNNGTGG 2 cut(s) 1258, 1293
CviQI GTAC 7 cut(s) 261, 276, 1362, 1510, 1584, 2121, 2541
DdeI CTNAG 8 cut(s) 299, 731, 780, 1153, 1289, 1339, 1505, 2651
DinI GGCGCC 1 cut(s) 1616
EaeI YGGCCR 1 cut(s) 2843
Eam1104I CTCTTC 4 cut(s) 333, 1200, 1877, 2177
EarI CTCTTC 4 cut(s) 333, 1200, 1877, 2177
Ecl136II GAGCTC 2 cut(s) 831, 3007
Eco130I CCWWGG 6 cut(s) 37, 72, 480, 1124, 2176, 2423
Eco24I GRGCYC 3 cut(s) 230, 833, 3009
Eco32I GATATC 1 cut(s) 1627
Eco47I GGWCC 5 cut(s) 103, 398, 502, 1770, 2828
Eco53kI GAGCTC 2 cut(s) 831, 3007
Eco57I CTGAAG 5 cut(s) 132, 518, 1061, 1199, 2999
Eco88I CYCGRG 1 cut(s) 2544
Eco91I GGTNACC 2 cut(s) 1129, 3091
EcoICRI GAGCTC 2 cut(s) 831, 3007
EcoO109I RGGNCCY 3 cut(s) 398, 502, 1770
EcoO65I GGTNACC 2 cut(s) 1129, 3091
EcoRI GAATTC 1 cut(s) 796
EcoRII CCWGG 5 cut(s) 553, 1198, 1434, 1518, 1873
EcoRV GATATC 1 cut(s) 1627
EcoT14I CCWWGG 6 cut(s) 37, 72, 480, 1124, 2176, 2423
EcoT22I ATGCAT 2 cut(s) 463, 892
EcoT38I GRGCYC 3 cut(s) 230, 833, 3009
EgeI GGCGCC 1 cut(s) 1616
EheI GGCGCC 1 cut(s) 1616
ErhI CCWWGG 6 cut(s) 37, 72, 480, 1124, 2176, 2423
FaqI GGGAC 6 cut(s) 384, 1465, 1783, 2569, 2841, 2948
FauI CCCGC 1 cut(s) 415
FbaI TGATCA 2 cut(s) 2314, 2779
FblI GTMKAC 2 cut(s) 1072, 1086
Fnu4HI GCNGC 4 cut(s) 1777, 2843, 2896, 3025
FokI GGATG 3 cut(s) 2265, 2696, 2881
FriOI GRGCYC 3 cut(s) 230, 833, 3009
Fsp4HI GCNGC 4 cut(s) 1777, 2843, 2896, 3025
FspBI CTAG 9 cut(s) 38, 314, 653, 1704, 2006, 2012, 2087, 2237, 3039
GlaI GCGC 3 cut(s) 165, 1143, 1616
GluI GCNGC 4 cut(s) 1777, 2843, 2896, 3025
GsuI CTGGAG 4 cut(s) 537, 1547, 1857, 2898
HaeII RGCGCY 2 cut(s) 167, 1618
HaeIII GGCC 8 cut(s) 472, 759, 975, 1518, 1537, 1803, 2106, 2845
HapII CCGG 3 cut(s) 900, 1497, 3021
HgaI GACGC 1 cut(s) 2848
HhaI GCGC 3 cut(s) 166, 1144, 1617
Hin1I GRCGYC 1 cut(s) 1615
Hin6I GCGC 3 cut(s) 164, 1142, 1615
HinP1I GCGC 3 cut(s) 164, 1142, 1615
HincII GTYRAC 1 cut(s) 786
HindII GTYRAC 1 cut(s) 786
HindIII AAGCTT 1 cut(s) 575
HinfI GANTC 8 cut(s) 807, 1114, 1411, 1858, 2185, 2414, 2647, 2719
HpaII CCGG 3 cut(s) 900, 1497, 3021
HphI GGTGA 7 cut(s) 626, 1162, 1171, 1438, 1805, 2165, 3085
HpyCH4III ACNGT 9 cut(s) 144, 156, 511, 1181, 1546, 1570, 1849, 2675, 2902
HpyCH4IV ACGT 3 cut(s) 66, 437, 1083
HpyF10VI GCNNNNNNNGC 5 cut(s) 83, 92, 458, 2204, 2839
HpyF3I CTNAG 8 cut(s) 299, 731, 780, 1153, 1289, 1339, 1505, 2651
HpySE526I ACGT 3 cut(s) 66, 437, 1083
Hsp92I GRCGYC 1 cut(s) 1615
HspAI GCGC 3 cut(s) 164, 1142, 1615
KasI GGCGCC 1 cut(s) 1614
Ksp22I TGATCA 2 cut(s) 2314, 2779
LguI GCTCTTC 2 cut(s) 333, 1877
LmnI GCTCC 3 cut(s) 149, 828, 836
Lsp1109I GCAGC 3 cut(s) 1763, 2907, 3036
LweI GCATC 6 cut(s) 674, 2177, 2243, 2458, 2674, 2859
MaeI CTAG 9 cut(s) 38, 314, 653, 1704, 2006, 2012, 2087, 2237, 3039
MaeII ACGT 3 cut(s) 66, 437, 1083
MaeIII GTNAC 9 cut(s) 644, 1129, 1354, 1444, 1459, 1546, 2853, 2947, 3091
MfeI CAATTG 1 cut(s) 447
MflI RGATCY 2 cut(s) 1642, 2755
MhlI GDGCHC 4 cut(s) 154, 230, 833, 3009
MluI ACGCGT 1 cut(s) 2857
Mly113I GGCGCC 1 cut(s) 1615
MlyI GAGTC 4 cut(s) 1123, 2194, 2423, 2713
MmeI TCCRAC 2 cut(s) 163, 1868
Mph1103I ATGCAT 2 cut(s) 463, 892
MroXI GAANNNNTTC 3 cut(s) 389, 1166, 2001
MseI TTAA 5 cut(s) 1719, 1821, 1943, 2070, 3078
MslI CAYNNNNRTG 3 cut(s) 25, 2439, 2903
MspA1I CMGCKG 3 cut(s) 600, 1817, 2655
MspI CCGG 3 cut(s) 900, 1497, 3021
MspR9I CCNGG 7 cut(s) 555, 1200, 1436, 1497, 1520, 1875, 3021
MunI CAATTG 1 cut(s) 447
Mva1269I GAATGC 2 cut(s) 7, 461
MvaI CCWGG 5 cut(s) 555, 1200, 1436, 1520, 1875
MvnI CGCG 3 cut(s) 2842, 2859, 2976
MwoI GCNNNNNNNGC 5 cut(s) 83, 92, 458, 2204, 2839
NarI GGCGCC 1 cut(s) 1615
NciI CCSGG 2 cut(s) 1497, 3021
NcoI CCATGG 2 cut(s) 72, 1124
NheI GCTAGC 1 cut(s) 3038
NlaIV GGNNCC 7 cut(s) 105, 400, 1616, 1771, 2574, 2757, 2829
NmuCI GTSAC 4 cut(s) 1444, 1459, 2853, 3091
NruI TCGCGA 1 cut(s) 2976
NsiI ATGCAT 2 cut(s) 463, 892
NspI RCATGY 2 cut(s) 255, 652
PagI TCATGA 1 cut(s) 2407
PaqCI CACCTGC 2 cut(s) 290, 1670
PciI ACATGT 1 cut(s) 251
PciSI GCTCTTC 2 cut(s) 333, 1877
PctI GAATGC 2 cut(s) 7, 461
PdmI GAANNNNTTC 3 cut(s) 389, 1166, 2001
PfeI GAWTC 4 cut(s) 807, 1411, 1858, 2647
PflMI CCANNNNNTGG 2 cut(s) 194, 560
PfoI TCCNGGA 3 cut(s) 553, 1495, 1873
PinAI ACCGGT 1 cut(s) 899
PkrI GCNGC 4 cut(s) 1778, 2844, 2897, 3026
PleI GAGTC 4 cut(s) 1122, 2193, 2422, 2713
PluTI GGCGCC 1 cut(s) 1618
PpsI GAGTC 4 cut(s) 1122, 2193, 2422, 2713
PpuMI RGGWCCY 3 cut(s) 398, 502, 1770
PscI ACATGT 1 cut(s) 251
PsiI TTATAA 1 cut(s) 3104
Psp124BI GAGCTC 2 cut(s) 833, 3009
Psp5II RGGWCCY 3 cut(s) 398, 502, 1770
Psp6I CCWGG 5 cut(s) 553, 1198, 1434, 1518, 1873
PspEI GGTNACC 2 cut(s) 1129, 3091
PspGI CCWGG 5 cut(s) 553, 1198, 1434, 1518, 1873
PspN4I GGNNCC 7 cut(s) 105, 400, 1616, 1771, 2574, 2757, 2829
PspPPI RGGWCCY 3 cut(s) 398, 502, 1770
PstI CTGCAG 1 cut(s) 2221
PstNI CAGNNNCTG 1 cut(s) 946
PsuI RGATCY 2 cut(s) 1642, 2755
PvuII CAGCTG 1 cut(s) 600
RruI TCGCGA 1 cut(s) 2976
RsaI GTAC 7 cut(s) 262, 277, 1363, 1511, 1585, 2122, 2542
RsaNI GTAC 7 cut(s) 261, 276, 1362, 1510, 1584, 2121, 2541
RseI CAYNNNNRTG 3 cut(s) 25, 2439, 2903
SacI GAGCTC 2 cut(s) 833, 3009
SapI GCTCTTC 2 cut(s) 333, 1877
SaqAI TTAA 5 cut(s) 1719, 1821, 1943, 2070, 3078
SatI GCNGC 4 cut(s) 1777, 2843, 2896, 3025
SchI GAGTC 4 cut(s) 1123, 2194, 2423, 2713
ScrFI CCNGG 7 cut(s) 555, 1200, 1436, 1497, 1520, 1875, 3021
SduI GDGCHC 4 cut(s) 154, 230, 833, 3009
SfaNI GCATC 6 cut(s) 674, 2177, 2243, 2458, 2674, 2859
SfcI CTRYAG 1 cut(s) 2217
SfoI GGCGCC 1 cut(s) 1616
SinI GGWCC 5 cut(s) 103, 398, 502, 1770, 2828
SmiMI CAYNNNNRTG 3 cut(s) 25, 2439, 2903
SmlI CTYRAG 2 cut(s) 578, 1483
SmoI CTYRAG 2 cut(s) 578, 1483
SsiI CCGC 6 cut(s) 408, 1376, 1817, 2655, 2831, 2842
SspDI GGCGCC 1 cut(s) 1614
SspI AATATT 2 cut(s) 1947, 2458
SspMI CTAG 9 cut(s) 38, 314, 653, 1704, 2006, 2012, 2087, 2237, 3039
SstI GAGCTC 2 cut(s) 833, 3009
StyD4I CCNGG 7 cut(s) 553, 1198, 1434, 1495, 1518, 1873, 3019
StyI CCWWGG 6 cut(s) 37, 72, 480, 1124, 2176, 2423
TaaI ACNGT 9 cut(s) 144, 156, 511, 1181, 1546, 1570, 1849, 2675, 2902
TaiI ACGT 3 cut(s) 69, 440, 1086
TaqI TCGA 5 cut(s) 131, 1670, 2262, 2466, 3082
TaqII GACCGA 1 cut(s) 2618
TatI WGTACW 1 cut(s) 1361
TauI GCSGC 1 cut(s) 2845
TfiI GAWTC 4 cut(s) 807, 1411, 1858, 2647
Tru1I TTAA 5 cut(s) 1719, 1821, 1943, 2070, 3078
Tru9I TTAA 5 cut(s) 1719, 1821, 1943, 2070, 3078
TseFI GTSAC 4 cut(s) 1444, 1459, 2853, 3091
TseI GCWGC 3 cut(s) 1776, 2895, 3024
Tsp45I GTSAC 4 cut(s) 1444, 1459, 2853, 3091
TspGWI ACGGA 2 cut(s) 116, 148
Van91I CCANNNNNTGG 2 cut(s) 194, 560
VpaK11BI GGWCC 5 cut(s) 103, 398, 502, 1770, 2828
XapI RAATTY 8 cut(s) 218, 618, 796, 853, 1222, 1258, 1835, 2277
XbaI TCTAGA 1 cut(s) 313
XceI RCATGY 2 cut(s) 255, 652
XmaJI CCTAGG 1 cut(s) 37
XmiI GTMKAC 2 cut(s) 1072, 1086
XmnI GAANNNNTTC 3 cut(s) 389, 1166, 2001
XspI CTAG 9 cut(s) 38, 314, 653, 1704, 2006, 2012, 2087, 2237, 3039
Zsp2I ATGCAT 2 cut(s) 463, 892
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.