Rh5DG137700

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
13862782 .. 13864710
1929 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG137700.1

Sequence Viewer

Length: 720 bp
ATGAAAGGAAGTGATGGCATATTATATGAGGCAGAAAACTCAACTCTTGGCCCAGCAACATATAATGTAACCAGTACAGAGAAATGGGCTGTTAGCAATGTGGGTTTGTTTGCTGAGAAGAAGAATCCAAGCTATTTGCTAACCTCCTTGGCACAGGTTACTGGGTCGGATGTGACCCCAGAGCTTTTCCAGACTGCAAGATTATCTGCAGGATCACTGAGATACTACGGCTTGGGTCTCCAGAATGGGCCTTATACAGTAAAATTACAATTTGCAGAAATGGTTTTTGATGATCGTGCATCACAAACTTGGAAAAGTTTAGGAAGGCGAGTATTTGATATCTATATTCAGGGGCATCTAGTAGTGAAGGACTTTGACATATCCAAGGAGGCAGGTGGTGTTTTAAGAGTAGCAGCGAAAAACTTCAATGTAAACGTGTCGGACAATTATGTTGAAATTCATTTGTTCTGGGCTGGTAAGGGGACCTGCTGCATACCTTATCAAGGTGATTATGGTCCACTAATATCAACGGTCAATGCTGTTCCAGATTTTAAACCAACTGTTTCTGGGATTCCACCAACTACTCCAGGAAAGAAGAGCATGACAGGGGTGATTGTTGGCGTTGCAGTCTCTGTCGGAGTTGTGAGCTTGCTATTAATATTTGCAGTTTTATATTTGAGGAGAAAAATACCAGACAAAGATGACGATGAAGAAGAGTGA

Protein Analysis

239

Amino Acids

26.01

Weight (kDa)

5.78

Isoelectric Point (pI)

17.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 3 - 176 3.2e-38 Malectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 383
Acc36I ACCTGC 2 cut(s) 383, 494
AclWI GGATC 1 cut(s) 220
AcsI RAATTY 1 cut(s) 456
AfaI GTAC 1 cut(s) 76
AfiI CCNNNNNNNGG 1 cut(s) 503
AflIII ACRYGT 1 cut(s) 435
AgsI TTSAA 2 cut(s) 427, 455
AjnI CCWGG 1 cut(s) 586
AluBI AGCT 3 cut(s) 132, 184, 648
AluI AGCT 3 cut(s) 132, 184, 648
Alw26I GTCTC 2 cut(s) 242, 634
AlwI GGATC 1 cut(s) 220
AlwNI CAGNNNCTG 1 cut(s) 632
AoxI GGCC 2 cut(s) 49, 248
ApeKI GCWGC 2 cut(s) 413, 489
ApoI RAATTY 1 cut(s) 456
AseI ATTAAT 1 cut(s) 656
Asp700I GAANNNNTTC 1 cut(s) 422
AspS9I GGNCC 4 cut(s) 50, 248, 483, 515
AsuHPI GGTGA 2 cut(s) 518, 622
AvaII GGWCC 2 cut(s) 483, 515
BbvI GCAGC 2 cut(s) 425, 476
BccI CCATC 1 cut(s) 8
BceAI ACGGC 1 cut(s) 244
BciT130I CCWGG 1 cut(s) 588
BcoDI GTCTC 2 cut(s) 242, 634
BfaI CTAG 1 cut(s) 359
BfmI CTRYAG 1 cut(s) 207
BfuAI ACCTGC 2 cut(s) 383, 494
BisI GCNGC 2 cut(s) 414, 490
BlsI GCNGC 2 cut(s) 415, 491
Bme1390I CCNGG 1 cut(s) 588
Bme18I GGWCC 2 cut(s) 483, 515
BmgT120I GGNCC 4 cut(s) 50, 248, 483, 515
BmiI GGNNCC 1 cut(s) 484
BmrFI CCNGG 1 cut(s) 588
BmrI ACTGGG 1 cut(s) 171
BmsI GCATC 2 cut(s) 308, 364
BmuI ACTGGG 1 cut(s) 171
BpmI CTGGAG 2 cut(s) 224, 570
BsaI GGTCTC 1 cut(s) 242
BsaJI CCNNGG 2 cut(s) 147, 384
Bsc4I CCNNNNNNNGG 1 cut(s) 503
Bse1I ACTGG 2 cut(s) 72, 166
Bse3DI GCAATG 1 cut(s) 103
BseBI CCWGG 1 cut(s) 588
BseDI CCNNGG 2 cut(s) 147, 384
BseGI GGATG 1 cut(s) 175
BseLI CCNNNNNNNGG 1 cut(s) 503
BseMI GCAATG 1 cut(s) 103
BseMII CTCAG 2 cut(s) 105, 209
BseNI ACTGG 2 cut(s) 72, 166
BseRI GAGGAG 1 cut(s) 694
BseXI GCAGC 2 cut(s) 425, 476
BseYI CCCAGC 1 cut(s) 52
BshFI GGCC 2 cut(s) 51, 250
BslFI GGGAC 1 cut(s) 496
BslI CCNNNNNNNGG 1 cut(s) 503
BsmAI GTCTC 2 cut(s) 242, 634
BsmFI GGGAC 1 cut(s) 496
BsnI GGCC 2 cut(s) 51, 250
Bso31I GGTCTC 1 cut(s) 242
Bsp143I GATC 2 cut(s) 212, 292
BspANI GGCC 2 cut(s) 51, 250
BspCNI CTCAG 2 cut(s) 106, 210
BspLI GGNNCC 1 cut(s) 484
BspMAI CTGCAG 1 cut(s) 211
BspMI ACCTGC 2 cut(s) 383, 494
BspPI GGATC 1 cut(s) 220
BspQI GCTCTTC 1 cut(s) 590
BspTNI GGTCTC 1 cut(s) 242
BsrDI GCAATG 1 cut(s) 103
BsrI ACTGG 2 cut(s) 72, 166
BssECI CCNNGG 2 cut(s) 147, 384
BssMI GATC 2 cut(s) 212, 292
BssT1I CCWWGG 2 cut(s) 147, 384
Bst2UI CCWGG 1 cut(s) 588
Bst4CI ACNGT 3 cut(s) 259, 532, 562
Bst6I CTCTTC 2 cut(s) 590, 708
BstC8I GCNNGC 1 cut(s) 650
BstDEI CTNAG 2 cut(s) 114, 218
BstENI CCTNNNNNAGG 1 cut(s) 501
BstF5I GGATG 1 cut(s) 175
BstKTI GATC 2 cut(s) 215, 295
BstMAI GTCTC 2 cut(s) 242, 634
BstMBI GATC 2 cut(s) 212, 292
BstNI CCWGG 1 cut(s) 588
BstSCI CCNGG 1 cut(s) 586
BstSFI CTRYAG 1 cut(s) 207
BstV1I GCAGC 2 cut(s) 425, 476
BsuRI GGCC 2 cut(s) 51, 250
BtsCI GGATG 1 cut(s) 175
BtsIMutI CAGTG 1 cut(s) 215
BveI ACCTGC 2 cut(s) 383, 494
Cac8I GCNNGC 1 cut(s) 650
CaiI CAGNNNCTG 1 cut(s) 632
Cfr13I GGNCC 4 cut(s) 50, 248, 483, 515
Csp6I GTAC 1 cut(s) 75
CviAII CATG 1 cut(s) 601
CviJI RGCY 8 cut(s) 51, 89, 132, 184, 231, 250, 473, 648
CviKI_1 RGCY 8 cut(s) 51, 89, 132, 184, 231, 250, 473, 648
CviQI GTAC 1 cut(s) 75
DdeI CTNAG 2 cut(s) 114, 218
DpnI GATC 2 cut(s) 214, 294
DpnII GATC 2 cut(s) 212, 292
DraI TTTAAA 1 cut(s) 553
Eam1104I CTCTTC 2 cut(s) 590, 708
EarI CTCTTC 2 cut(s) 590, 708
Eco130I CCWWGG 2 cut(s) 147, 384
Eco31I GGTCTC 1 cut(s) 242
Eco32I GATATC 1 cut(s) 340
Eco47I GGWCC 2 cut(s) 483, 515
EcoNI CCTNNNNNAGG 1 cut(s) 501
EcoO109I RGGNCCY 1 cut(s) 483
EcoRII CCWGG 1 cut(s) 586
EcoRV GATATC 1 cut(s) 340
EcoT14I CCWWGG 2 cut(s) 147, 384
ErhI CCWWGG 2 cut(s) 147, 384
FaeI CATG 1 cut(s) 604
FaqI GGGAC 1 cut(s) 496
FatI CATG 1 cut(s) 600
Fnu4HI GCNGC 2 cut(s) 414, 490
FokI GGATG 1 cut(s) 182
Fsp4HI GCNGC 2 cut(s) 414, 490
FspBI CTAG 1 cut(s) 359
GluI GCNGC 2 cut(s) 414, 490
GsaI CCCAGC 1 cut(s) 56
GsuI CTGGAG 2 cut(s) 224, 570
HaeIII GGCC 2 cut(s) 51, 250
Hin1II CATG 1 cut(s) 604
HinfI GANTC 2 cut(s) 124, 571
HphI GGTGA 2 cut(s) 518, 622
Hpy166II GTNNAC 2 cut(s) 433, 518
Hpy188I TCNGA 3 cut(s) 169, 442, 638
Hpy188III TCNNGA 3 cut(s) 190, 241, 545
Hpy8I GTNNAC 2 cut(s) 433, 518
HpyAV CCTTC 2 cut(s) 318, 361
HpyCH4III ACNGT 3 cut(s) 259, 532, 562
HpyCH4IV ACGT 1 cut(s) 435
HpyCH4V TGCA 7 cut(s) 197, 209, 275, 299, 492, 626, 665
HpyF3I CTNAG 2 cut(s) 114, 218
HpySE526I ACGT 1 cut(s) 435
Hsp92II CATG 1 cut(s) 604
Kzo9I GATC 2 cut(s) 212, 292
LguI GCTCTTC 1 cut(s) 590
Lsp1109I GCAGC 2 cut(s) 425, 476
LweI GCATC 2 cut(s) 308, 364
MaeI CTAG 1 cut(s) 359
MaeII ACGT 1 cut(s) 435
MaeIII GTNAC 3 cut(s) 67, 157, 172
MalI GATC 2 cut(s) 214, 294
MboI GATC 2 cut(s) 212, 292
MboII GAAGA 3 cut(s) 130, 133, 607
MluCI AATT 4 cut(s) 263, 269, 445, 456
MmeI TCCRAC 3 cut(s) 147, 420, 616
MnlI CCTC 4 cut(s) 22, 154, 382, 672
MroXI GAANNNNTTC 1 cut(s) 422
MseI TTAA 3 cut(s) 404, 552, 656
MspR9I CCNGG 1 cut(s) 588
MvaI CCWGG 1 cut(s) 588
NdeII GATC 2 cut(s) 212, 292
NlaIII CATG 1 cut(s) 604
NlaIV GGNNCC 1 cut(s) 484
NmuCI GTSAC 1 cut(s) 172
PaqCI CACCTGC 1 cut(s) 383
PciSI GCTCTTC 1 cut(s) 590
PdmI GAANNNNTTC 1 cut(s) 422
PfeI GAWTC 2 cut(s) 124, 571
PfoI TCCNGGA 1 cut(s) 586
PkrI GCNGC 2 cut(s) 415, 491
PpuMI RGGWCCY 1 cut(s) 483
PshBI ATTAAT 1 cut(s) 656
Psp5II RGGWCCY 1 cut(s) 483
Psp6I CCWGG 1 cut(s) 586
PspFI CCCAGC 1 cut(s) 52
PspGI CCWGG 1 cut(s) 586
PspN4I GGNNCC 1 cut(s) 484
PspPI GGNCC 4 cut(s) 50, 248, 483, 515
PspPPI RGGWCCY 1 cut(s) 483
PstI CTGCAG 1 cut(s) 211
PstNI CAGNNNCTG 1 cut(s) 632
RsaI GTAC 1 cut(s) 76
RsaNI GTAC 1 cut(s) 75
SapI GCTCTTC 1 cut(s) 590
SaqAI TTAA 3 cut(s) 404, 552, 656
SatI GCNGC 2 cut(s) 414, 490
Sau3AI GATC 2 cut(s) 212, 292
Sau96I GGNCC 4 cut(s) 50, 248, 483, 515
ScrFI CCNGG 1 cut(s) 588
SfaNI GCATC 2 cut(s) 308, 364
SfcI CTRYAG 1 cut(s) 207
SinI GGWCC 2 cut(s) 483, 515
Sse9I AATT 4 cut(s) 263, 269, 445, 456
SspI AATATT 1 cut(s) 660
SspMI CTAG 1 cut(s) 359
StyD4I CCNGG 1 cut(s) 586
StyI CCWWGG 2 cut(s) 147, 384
TaaI ACNGT 3 cut(s) 259, 532, 562
TaiI ACGT 1 cut(s) 438
TasI AATT 4 cut(s) 263, 269, 445, 456
TatI WGTACW 1 cut(s) 74
TfiI GAWTC 2 cut(s) 124, 571
Tru1I TTAA 3 cut(s) 404, 552, 656
Tru9I TTAA 3 cut(s) 404, 552, 656
TscAI CASTG 1 cut(s) 222
TseFI GTSAC 1 cut(s) 172
TseI GCWGC 2 cut(s) 413, 489
Tsp45I GTSAC 1 cut(s) 172
TspDTI ATGAA 2 cut(s) 17, 449
TspRI CASTG 1 cut(s) 222
VpaK11BI GGWCC 2 cut(s) 483, 515
VspI ATTAAT 1 cut(s) 656
XagI CCTNNNNNAGG 1 cut(s) 501
XapI RAATTY 1 cut(s) 456
XmnI GAANNNNTTC 1 cut(s) 422
XspI CTAG 1 cut(s) 359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.