RLG00000032881
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
20350424 .. 20358491
8068 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032881

Sequence Viewer

Length: 2019 bp
ATGCAATACTTGAGCCTTGGCATTAATGCTTTATCGGGCGAGCTACCAAAGGAACTCGGAAATCTCACTGAATTGCTATCATTTGCTATTGGGACAAACAACTTTTCTGGTCCTCTGCCATCTGAACTAGGGAGTTTATCAAAATTACAACAACTTTACCTTGATAGTTCTGGAGTTAGCGGTGAGATTCCATCAACATTTGCTAATCTACAAAGCTTGCAGACACTTTGGGCATCAGACGTTGAACTCTCTGGCAGTATACCTGACTTCATAGGAAATTGGTCAAAGCTTACTTCCTTGAGGTTTCAAGGAAACTCCTTTGAAGGTCCTATACCATCTGCACTTTCCAATCTGACTTCTCTGACAGAGCTGTATATAACTGACATATCTACTACCAACGGGATCTCTTCTCTTGGGTTTATTAAGGATATGAAGTCTCTATCTGTCTTAGTGCTAAGAAATAACAACATTTCTGATTCAATTCCTTCCAACATTGGAGAATACCAAAGTTTATCTCAGCTATGGGGAGTTAGCAACGTTGGGTATTTCACTGGAAGCAGCAATCCTCAGTACACAATTTTCTCCTCATCTCAATTTAAAAATACTCTAGATTCTGAGCTATTCCAGACTGCAAGGCTCTCTGCTTCATCACTTAGATATTACGGCTTGGGGCTTGAGAATGGTAACTACACAGTGAACCTACAGTTTGCTGAACAAGCTATCCTAGATTCTACTACATGGAAAAGTCTTGGGAGGCGCGTGTTTAATATTTATATCCAGGGAAATCTGGTTCTAAAGGATTTTGACATACGAAAGGAGGCAGGGGGATCTTTCCTAGCTGTTCAGAAGGAATACACGGCTCAGGTTTCAGAGAACTACCTTGAAATCCATCTCTTTTGGGCCGGAAAGGGGACTTGTTGTGTACCTGCGCAGGGTACTTATGGACCTATTATTTCAGCCATTAGTGCTACACCAGACATCGCTTGCTCAAGTCTAAATGGACTTGAGGATATTGGGAACAAGTTTATATTAGGTATCCTTAACGACGGAAGAGTAATTGCCGTGAAGCAACTGTCTGCAGCATCCCACCAAGGAAAGAACCAGTTTGTAACTGAGATTGCCACTATATCTGCCGTGCAACACAATAACCTAGTGACTTTGTATGGGTTCTGCACTGAGGGAGTTAAAAGGCTCCTTGTCTATGAGTATCTGGAAAACAAGAGTCTTGATCAAGCATTATTTGGAAAGAAAAGTTTGAATCTTGATTGGTCAACACGATTTGACATATGCTTGGGAGTAGCTAGAGGTTTAACTTATCTTCATGAGGAATCAAGGCTTCGAATTGTTCATAGAGATGTGAAGGCTAGTAATATTCTGCTTGACTCTAATCTTATCCCCAAGATATCAGATTTTGGTTTGGCCAAGCTTTATGACAATAAAATGACCCACATAAGTACCGGGGTTGCGGGAACAATTGGGTATCTTGCACCGGAATATGCCATGCGTGGACACCTTACAGAAAAGACCGATGTGTTTGCATTTGGTGTTGTAGCTCTAGAGATTGTCAGTGGTAGGCCAAATTCTGACCCGAGTTTGGAAGAAGATAAGATGTATCTTCTGGAATGGGCTTGGAACTTGCATGAGAACAACCGTGAAGTCGAACTAGTGGACTACAGATTATCCGAATTCAATGAGGAAGAAGCAAAAAGAGTAATGAAGATAGGACTTTTGTGCACTCAAACATCACCAATTCTGCGACCGACAATGTCTGGTGTTGTGGGAATGTTTACAGGAGCTATTGAAGTGACAACAGTAACTTCAAAGCCCGGTTACTTGACCGACTGGAAATTCAATGATGCAAGTAGTGCCAGTAACATAACACTTGGTATGTCGACTCAAGGAACTAATTCTAGCTTGTACAACTCATCGGCTAGTACAAGCATGGTAGGGGATGCAAGGCAAACACCTACAAATGACACTCATGCCATTCTTCACAATACTGTTAATGATGGTCGGTGA

Protein Analysis

673

Amino Acids

73.49

Weight (kDa)

5.2

Isoelectric Point (pI)

35.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 2 - 173 2.2e-13 Leucine-rich repeat region
LRR_14 PF23598 61 - 176 3e-09 Leucine-rich repeat region
Malectin PF11721 194 - 321 3.3e-39 Malectin domain
Pkinase PF00069 348 - 535 2.3e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 351 - 593 1.5e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 930
Acc36I ACCTGC 1 cut(s) 934
AccI GTMKAC 2 cut(s) 259, 1892
AccII CGCG 1 cut(s) 759
AciI CCGC 2 cut(s) 180, 1466
AclI AACGTT 1 cut(s) 537
AclWI GGATC 2 cut(s) 410, 835
AcoI YGGCCR 1 cut(s) 1419
AcsI RAATTY 3 cut(s) 1579, 1685, 1847
AfaI GTAC 6 cut(s) 572, 924, 937, 1456, 1919, 1936
AfiI CCNNNNNNNGG 3 cut(s) 909, 932, 1594
AhlI ACTAGT 1 cut(s) 1663
AjnI CCWGG 1 cut(s) 777
AloI GAACNNNNNNTCC 4 cut(s) 705, 737, 774, 806
Alw21I GWGCWC 1 cut(s) 1736
Alw26I GTCTC 1 cut(s) 441
Alw44I GTGCAC 1 cut(s) 1732
AlwI GGATC 2 cut(s) 410, 835
Ama87I CYCGRG 1 cut(s) 1588
AoxI GGCC 3 cut(s) 900, 1419, 1574
ApaLI GTGCAC 1 cut(s) 1732
ApeKI GCWGC 2 cut(s) 558, 1079
ApoI RAATTY 3 cut(s) 1579, 1685, 1847
AseI ATTAAT 1 cut(s) 24
Asp700I GAANNNNTTC 1 cut(s) 1906
AspLEI GCGC 2 cut(s) 759, 931
AspS9I GGNCC 4 cut(s) 110, 326, 900, 944
AsuC2I CCSGG 2 cut(s) 1459, 1827
AsuHPI GGTGA 2 cut(s) 194, 1737
AsuII TTCGAA 1 cut(s) 1339
AvaI CYCGRG 1 cut(s) 1588
AvaII GGWCC 3 cut(s) 110, 326, 944
BaeGI GKGCMC 1 cut(s) 1736
BaeI ACNNNNGTAYC 2 cut(s) 1438, 1471
BalI TGGCCA 1 cut(s) 1421
BarI GAAGNNNNNNTAC 2 cut(s) 315, 347
Bbv12I GWGCWC 1 cut(s) 1736
BbvI GCAGC 2 cut(s) 570, 1091
BccI CCATC 5 cut(s) 127, 199, 343, 897, 2003
BceAI ACGGC 4 cut(s) 679, 873, 1046, 1118
BcgI CGANNNNNNTGC 2 cut(s) 1517, 1551
BciT130I CCWGG 1 cut(s) 779
BciVI GTATCC 1 cut(s) 1046
BclI TGATCA 1 cut(s) 1228
BcnI CCSGG 2 cut(s) 1459, 1827
BcoDI GTCTC 1 cut(s) 441
BcuI ACTAGT 1 cut(s) 1663
BfmI CTRYAG 3 cut(s) 701, 1077, 1672
BfuAI ACCTGC 1 cut(s) 934
BfuI GTATCC 1 cut(s) 1046
BisI GCNGC 2 cut(s) 559, 1080
BlsI GCNGC 2 cut(s) 560, 1081
Bme1390I CCNGG 3 cut(s) 779, 1459, 1827
Bme18I GGWCC 3 cut(s) 110, 326, 944
BmeT110I CYCGRG 1 cut(s) 1588
BmgT120I GGNCC 4 cut(s) 110, 326, 900, 944
BmiI GGNNCC 1 cut(s) 1193
BmrFI CCNGG 3 cut(s) 779, 1459, 1827
BmsI GCATC 4 cut(s) 242, 1091, 1846, 1942
BpmI CTGGAG 1 cut(s) 192
Bpu10I CCTNAGC 1 cut(s) 861
Bpu14I TTCGAA 1 cut(s) 1339
BpuEI CTTGAG 6 cut(s) 31, 319, 695, 973, 1025, 1881
BpuMI CCSGG 2 cut(s) 1459, 1827
BsaJI CCNNGG 4 cut(s) 16, 778, 1090, 1458
BsaWI WCCGGW 1 cut(s) 1489
Bsc4I CCNNNNNNNGG 3 cut(s) 909, 932, 1594
Bse1I ACTGG 4 cut(s) 556, 1102, 1847, 1869
BseBI CCWGG 1 cut(s) 779
BseDI CCNNGG 4 cut(s) 16, 778, 1090, 1458
BseGI GGATG 2 cut(s) 1082, 1957
BseLI CCNNNNNNNGG 3 cut(s) 909, 932, 1594
BseMII CTCAG 6 cut(s) 530, 581, 606, 875, 1104, 1167
BseNI ACTGG 4 cut(s) 556, 1102, 1847, 1869
BseRI GAGGAG 1 cut(s) 574
BseSI GKGCMC 1 cut(s) 1736
BseXI GCAGC 2 cut(s) 570, 1091
BsgI GTGCAG 2 cut(s) 324, 1156
Bsh1236I CGCG 1 cut(s) 759
Bsh1285I CGRYCG 1 cut(s) 1760
BshFI GGCC 3 cut(s) 902, 1421, 1576
BsiEI CGRYCG 1 cut(s) 1760
BsiHKAI GWGCWC 1 cut(s) 1736
BsiHKCI CYCGRG 1 cut(s) 1588
BsiSI CCGG 4 cut(s) 903, 1458, 1490, 1827
BslFI GGGAC 2 cut(s) 106, 925
BslI CCNNNNNNNGG 3 cut(s) 909, 932, 1594
BsmAI GTCTC 1 cut(s) 441
BsmFI GGGAC 2 cut(s) 106, 925
BsnI GGCC 3 cut(s) 902, 1421, 1576
BsoBI CYCGRG 1 cut(s) 1588
Bsp119I TTCGAA 1 cut(s) 1339
Bsp1286I GDGCHC 1 cut(s) 1736
Bsp1407I TGTACA 1 cut(s) 1917
Bsp143I GATC 3 cut(s) 402, 827, 1228
BspACI CCGC 2 cut(s) 180, 1466
BspANI GGCC 3 cut(s) 902, 1421, 1576
BspCNI CTCAG 6 cut(s) 529, 580, 607, 874, 1105, 1168
BspFNI CGCG 1 cut(s) 759
BspHI TCATGA 1 cut(s) 1321
BspLI GGNNCC 1 cut(s) 1193
BspMAI CTGCAG 1 cut(s) 1081
BspMI ACCTGC 1 cut(s) 934
BspPI GGATC 2 cut(s) 410, 835
BspT104I TTCGAA 1 cut(s) 1339
BsrGI TGTACA 1 cut(s) 1917
BsrI ACTGG 4 cut(s) 556, 1102, 1847, 1869
BssECI CCNNGG 4 cut(s) 16, 778, 1090, 1458
BssMI GATC 3 cut(s) 402, 827, 1228
BssNAI GTATAC 1 cut(s) 260
BssT1I CCWWGG 2 cut(s) 16, 1090
Bst1107I GTATAC 1 cut(s) 260
Bst2UI CCWGG 1 cut(s) 779
Bst4CI ACNGT 6 cut(s) 694, 705, 1074, 1652, 1813, 2002
Bst6I CTCTTC 2 cut(s) 412, 1045
BstAPI GCANNNNNTGC 1 cut(s) 1865
BstAUI TGTACA 1 cut(s) 1917
BstBI TTCGAA 1 cut(s) 1339
BstC8I GCNNGC 3 cut(s) 41, 218, 985
BstDEI CTNAG 9 cut(s) 448, 455, 516, 567, 615, 653, 861, 1113, 1176
BstF5I GGATG 2 cut(s) 1082, 1957
BstFNI CGCG 1 cut(s) 759
BstHHI GCGC 2 cut(s) 759, 931
BstKTI GATC 3 cut(s) 405, 830, 1231
BstMAI GTCTC 1 cut(s) 441
BstMBI GATC 3 cut(s) 402, 827, 1228
BstMCI CGRYCG 1 cut(s) 1760
BstMWI GCNNNNNNNGC 3 cut(s) 716, 965, 1865
BstNI CCWGG 1 cut(s) 779
BstSCI CCNGG 3 cut(s) 777, 1457, 1825
BstSFI CTRYAG 3 cut(s) 701, 1077, 1672
BstSLI GKGCMC 1 cut(s) 1736
BstUI CGCG 1 cut(s) 759
BstV1I GCAGC 2 cut(s) 570, 1091
BstX2I RGATCY 2 cut(s) 402, 827
BstYI RGATCY 2 cut(s) 402, 827
BstZ17I GTATAC 1 cut(s) 260
BsuI GTATCC 1 cut(s) 1046
BsuRI GGCC 3 cut(s) 902, 1421, 1576
BtgZI GCGATG 1 cut(s) 964
BtsCI GGATG 2 cut(s) 1082, 1957
BtsIMutI CAGTG 5 cut(s) 66, 549, 699, 1173, 1573
BveI ACCTGC 1 cut(s) 934
Cac8I GCNNGC 3 cut(s) 41, 218, 985
CciI TCATGA 1 cut(s) 1321
CfoI GCGC 2 cut(s) 759, 931
Cfr13I GGNCC 4 cut(s) 110, 326, 900, 944
Csp6I GTAC 6 cut(s) 571, 923, 936, 1455, 1918, 1935
CviAII CATG 6 cut(s) 738, 1322, 1501, 1640, 1942, 1982
CviQI GTAC 6 cut(s) 571, 923, 936, 1455, 1918, 1935
DdeI CTNAG 9 cut(s) 448, 455, 516, 567, 615, 653, 861, 1113, 1176
DpnI GATC 3 cut(s) 404, 829, 1230
DpnII GATC 3 cut(s) 402, 827, 1228
DraI TTTAAA 1 cut(s) 598
EaeI YGGCCR 1 cut(s) 1419
Eam1104I CTCTTC 2 cut(s) 412, 1045
EarI CTCTTC 2 cut(s) 412, 1045
Eco130I CCWWGG 2 cut(s) 16, 1090
Eco32I GATATC 1 cut(s) 1404
Eco47I GGWCC 3 cut(s) 110, 326, 944
Eco88I CYCGRG 1 cut(s) 1588
EcoO109I RGGNCCY 1 cut(s) 326
EcoRI GAATTC 1 cut(s) 1685
EcoRII CCWGG 1 cut(s) 777
EcoRV GATATC 1 cut(s) 1404
EcoT14I CCWWGG 2 cut(s) 16, 1090
ErhI CCWWGG 2 cut(s) 16, 1090
FaeI CATG 6 cut(s) 741, 1325, 1504, 1643, 1945, 1985
FaqI GGGAC 2 cut(s) 106, 925
FatI CATG 6 cut(s) 737, 1321, 1500, 1639, 1941, 1981
FauI CCCGC 1 cut(s) 1459
FauNDI CATATG 1 cut(s) 1286
FbaI TGATCA 1 cut(s) 1228
FblI GTMKAC 2 cut(s) 259, 1892
Fnu4HI GCNGC 2 cut(s) 559, 1080
FokI GGATG 2 cut(s) 1069, 1964
Fsp4HI GCNGC 2 cut(s) 559, 1080
FspI TGCGCA 1 cut(s) 930
GlaI GCGC 2 cut(s) 758, 930
GluI GCNGC 2 cut(s) 559, 1080
GsuI CTGGAG 1 cut(s) 192
HaeIII GGCC 3 cut(s) 902, 1421, 1576
HapII CCGG 4 cut(s) 903, 1458, 1490, 1827
HhaI GCGC 2 cut(s) 759, 931
Hin1II CATG 6 cut(s) 741, 1325, 1504, 1643, 1945, 1985
Hin6I GCGC 2 cut(s) 757, 929
HinP1I GCGC 2 cut(s) 757, 929
HincII GTYRAC 2 cut(s) 1272, 1893
HindII GTYRAC 2 cut(s) 1272, 1893
HindIII AAGCTT 3 cut(s) 214, 287, 1424
HinfI GANTC 9 cut(s) 187, 476, 611, 728, 1222, 1258, 1328, 1382, 1894
HpaII CCGG 4 cut(s) 903, 1458, 1490, 1827
HphI GGTGA 2 cut(s) 194, 1737
Hpy188III TCNNGA 9 cut(s) 171, 608, 625, 1211, 1226, 1262, 1322, 1556, 1619
Hpy99I CGWCG 1 cut(s) 1049
HpyAV CCTTC 4 cut(s) 317, 495, 841, 1354
HpyCH4III ACNGT 6 cut(s) 694, 705, 1074, 1652, 1813, 2002
HpyCH4IV ACGT 2 cut(s) 240, 537
HpyF10VI GCNNNNNNNGC 3 cut(s) 716, 965, 1865
HpyF3I CTNAG 9 cut(s) 448, 455, 516, 567, 615, 653, 861, 1113, 1176
HpySE526I ACGT 2 cut(s) 240, 537
Hsp92II CATG 6 cut(s) 741, 1325, 1504, 1643, 1945, 1985
HspAI GCGC 2 cut(s) 757, 929
Ksp22I TGATCA 1 cut(s) 1228
Kzo9I GATC 3 cut(s) 402, 827, 1228
LmnI GCTCC 2 cut(s) 1197, 1793
Lsp1109I GCAGC 2 cut(s) 570, 1091
LweI GCATC 4 cut(s) 242, 1091, 1846, 1942
MaeII ACGT 2 cut(s) 240, 537
MaeIII GTNAC 7 cut(s) 683, 1108, 1153, 1804, 1813, 1829, 1871
MalI GATC 3 cut(s) 404, 829, 1230
MboI GATC 3 cut(s) 402, 827, 1228
MboII GAAGA 9 cut(s) 399, 1062, 1310, 1607, 1610, 1613, 1709, 1729, 1982
MfeI CAATTG 1 cut(s) 1473
MflI RGATCY 2 cut(s) 402, 827
MhlI GDGCHC 1 cut(s) 1736
MlsI TGGCCA 1 cut(s) 1421
MluNI TGGCCA 1 cut(s) 1421
MlyI GAGTC 3 cut(s) 1231, 1376, 1888
MmeI TCCRAC 1 cut(s) 513
Mox20I TGGCCA 1 cut(s) 1421
MroXI GAANNNNTTC 1 cut(s) 1906
MscI TGGCCA 1 cut(s) 1421
MseI TTAA 8 cut(s) 24, 423, 597, 765, 1041, 1185, 1310, 2004
MslI CAYNNNNRTG 1 cut(s) 1353
Msp20I TGGCCA 1 cut(s) 1421
MspI CCGG 4 cut(s) 903, 1458, 1490, 1827
MspR9I CCNGG 3 cut(s) 779, 1459, 1827
MunI CAATTG 1 cut(s) 1473
MvaI CCWGG 1 cut(s) 779
MvnI CGCG 1 cut(s) 759
MwoI GCNNNNNNNGC 3 cut(s) 716, 965, 1865
NciI CCSGG 2 cut(s) 1459, 1827
NdeI CATATG 1 cut(s) 1286
NdeII GATC 3 cut(s) 402, 827, 1228
NlaIII CATG 6 cut(s) 741, 1325, 1504, 1643, 1945, 1985
NlaIV GGNNCC 1 cut(s) 1193
NmuCI GTSAC 2 cut(s) 1153, 1804
NsbI TGCGCA 1 cut(s) 930
NspV TTCGAA 1 cut(s) 1339
PagI TCATGA 1 cut(s) 1321
PdmI GAANNNNTTC 1 cut(s) 1906
PfeI GAWTC 6 cut(s) 187, 476, 611, 728, 1258, 1328
PflFI GACNNNGTC 1 cut(s) 1765
PkrI GCNGC 2 cut(s) 560, 1081
PleI GAGTC 3 cut(s) 1230, 1376, 1888
PpsI GAGTC 3 cut(s) 1230, 1376, 1888
PpuMI RGGWCCY 1 cut(s) 326
PshBI ATTAAT 1 cut(s) 24
Psp1406I AACGTT 1 cut(s) 537
Psp5II RGGWCCY 1 cut(s) 326
Psp6I CCWGG 1 cut(s) 777
PspGI CCWGG 1 cut(s) 777
PspN4I GGNNCC 1 cut(s) 1193
PspPI GGNCC 4 cut(s) 110, 326, 900, 944
PspPPI RGGWCCY 1 cut(s) 326
PstI CTGCAG 1 cut(s) 1081
PsuI RGATCY 2 cut(s) 402, 827
PsyI GACNNNGTC 1 cut(s) 1765
RsaI GTAC 6 cut(s) 572, 924, 937, 1456, 1919, 1936
RsaNI GTAC 6 cut(s) 571, 923, 936, 1455, 1918, 1935
RseI CAYNNNNRTG 1 cut(s) 1353
SalI GTCGAC 1 cut(s) 1891
SaqAI TTAA 8 cut(s) 24, 423, 597, 765, 1041, 1185, 1310, 2004
SatI GCNGC 2 cut(s) 559, 1080
Sau3AI GATC 3 cut(s) 402, 827, 1228
Sau96I GGNCC 4 cut(s) 110, 326, 900, 944
SchI GAGTC 3 cut(s) 1231, 1376, 1888
ScrFI CCNGG 3 cut(s) 779, 1459, 1827
SduI GDGCHC 1 cut(s) 1736
SfaNI GCATC 4 cut(s) 242, 1091, 1846, 1942
SfcI CTRYAG 3 cut(s) 701, 1077, 1672
SfuI TTCGAA 1 cut(s) 1339
SinI GGWCC 3 cut(s) 110, 326, 944
SmiMI CAYNNNNRTG 1 cut(s) 1353
SmlI CTYRAG 6 cut(s) 10, 298, 674, 988, 1004, 1896
SmoI CTYRAG 6 cut(s) 10, 298, 674, 988, 1004, 1896
SpeI ACTAGT 1 cut(s) 1663
SsiI CCGC 2 cut(s) 180, 1466
SspI AATATT 2 cut(s) 769, 1372
StyD4I CCNGG 3 cut(s) 777, 1457, 1825
StyI CCWWGG 2 cut(s) 16, 1090
TaaI ACNGT 6 cut(s) 694, 705, 1074, 1652, 1813, 2002
TaiI ACGT 2 cut(s) 243, 540
TaqI TCGA 3 cut(s) 1339, 1659, 1892
TaqII GACCGA 3 cut(s) 1541, 1774, 1853
TatI WGTACW 3 cut(s) 570, 1917, 1934
TfiI GAWTC 6 cut(s) 187, 476, 611, 728, 1258, 1328
Tru1I TTAA 8 cut(s) 24, 423, 597, 765, 1041, 1185, 1310, 2004
Tru9I TTAA 8 cut(s) 24, 423, 597, 765, 1041, 1185, 1310, 2004
TscAI CASTG 5 cut(s) 73, 556, 699, 1180, 1573
TseFI GTSAC 2 cut(s) 1153, 1804
TseI GCWGC 2 cut(s) 558, 1079
Tsp45I GTSAC 2 cut(s) 1153, 1804
TspDTI ATGAA 6 cut(s) 259, 446, 636, 1310, 1337, 1730
TspGWI ACGGA 1 cut(s) 1062
TspRI CASTG 5 cut(s) 73, 556, 699, 1180, 1573
Tth111I GACNNNGTC 1 cut(s) 1765
VneI GTGCAC 1 cut(s) 1732
VpaK11BI GGWCC 3 cut(s) 110, 326, 944
VspI ATTAAT 1 cut(s) 24
XapI RAATTY 3 cut(s) 1579, 1685, 1847
XbaI TCTAGA 2 cut(s) 607, 1555
XmiI GTMKAC 2 cut(s) 259, 1892
XmnI GAANNNNTTC 1 cut(s) 1906
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.