Rw5G044930
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
78672006 .. 78672720
715 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G044930.1

Sequence Viewer

Length: 540 bp
ATGCGTGGACACCTGACAGAGAAAACCGATGTGTTTGCCTATGGTGTTGTCATTCTAGAAATTGTCAGCGGTAGGCCAAATTCTGATCCAAGTTTGGAAGGCGATATGGTTTATCTTCTTGAATTGGCTTGGAACTTGCATGAAAACGAACGTGAAGTTGATCTAGTAGACTCTAGATTATCCGAATTCAATGAGGAAGAAGCAAGACGAATTATCAACATAGGACTTTTGTGCACTCAATCATCACCAATGCTACGACCACCTATGTCTCGCGTGATTGGAATGCTTGCAGGAGATATTGAAGTGACTCCTGCTATTTCAAAGCCCGGTTACTTGACAGACTGGAGATTTGATGATGTAACCAGCCAAACGAAATATGGGAGTACTGGCACCAGTCTAGGAACTGATATGTCAACTAGAGGAACTGACTTCAGCTTTTACGACTCATCGGCAAGTACAAGCGTGATGGGGGATGCAGGGCAATTACCTTCAAATGCCACTCTTCCCATACTCAATAATACTAATGGTGATGGTAGGTGA

Protein Analysis

179

Amino Acids

19.58

Weight (kDa)

4.45

Isoelectric Point (pI)

47.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 389
AccI GTMKAC 1 cut(s) 168
AccII CGCG 1 cut(s) 273
AciI CCGC 1 cut(s) 69
AclWI GGATC 1 cut(s) 80
AcsI RAATTY 2 cut(s) 79, 185
AcuI CTGAAG 1 cut(s) 415
AfaI GTAC 2 cut(s) 385, 457
AgsI TTSAA 5 cut(s) 122, 190, 302, 321, 492
AluBI AGCT 1 cut(s) 435
AluI AGCT 1 cut(s) 435
Alw21I GWGCWC 1 cut(s) 236
Alw26I GTCTC 1 cut(s) 273
Alw44I GTGCAC 1 cut(s) 232
AlwI GGATC 1 cut(s) 80
AoxI GGCC 1 cut(s) 74
ApaLI GTGCAC 1 cut(s) 232
ApoI RAATTY 2 cut(s) 79, 185
ArsI GACNNNNNNTTYG 2 cut(s) 332, 364
AsuC2I CCSGG 1 cut(s) 327
AsuHPI GGTGA 2 cut(s) 237, 539
BaeGI GKGCMC 1 cut(s) 236
BanI GGYRCC 1 cut(s) 389
Bbv12I GWGCWC 1 cut(s) 236
BccI CCATC 2 cut(s) 460, 524
BcgI CGANNNNNNTGC 2 cut(s) 17, 51
BcnI CCSGG 1 cut(s) 327
BcoDI GTCTC 1 cut(s) 273
BfaI CTAG 5 cut(s) 56, 164, 174, 398, 417
BmcAI AGTACT 1 cut(s) 385
Bme1390I CCNGG 1 cut(s) 327
BmiI GGNNCC 1 cut(s) 391
BmrFI CCNGG 1 cut(s) 327
BmsI GCATC 1 cut(s) 463
BpmI CTGGAG 1 cut(s) 364
BpuMI CCSGG 1 cut(s) 327
Bse1I ACTGG 3 cut(s) 347, 391, 393
BseGI GGATG 1 cut(s) 478
BseNI ACTGG 3 cut(s) 347, 391, 393
BseSI GKGCMC 1 cut(s) 236
Bsh1236I CGCG 1 cut(s) 273
BshFI GGCC 1 cut(s) 76
BshNI GGYRCC 1 cut(s) 389
BsiHKAI GWGCWC 1 cut(s) 236
BsiSI CCGG 1 cut(s) 327
BsmAI GTCTC 1 cut(s) 273
BsmI GAATGC 1 cut(s) 288
BsnI GGCC 1 cut(s) 76
Bsp1286I GDGCHC 1 cut(s) 236
Bsp143I GATC 2 cut(s) 85, 160
BspACI CCGC 1 cut(s) 69
BspANI GGCC 1 cut(s) 76
BspFNI CGCG 1 cut(s) 273
BspLI GGNNCC 1 cut(s) 391
BspPI GGATC 1 cut(s) 80
BspT107I GGYRCC 1 cut(s) 389
BsrI ACTGG 3 cut(s) 347, 391, 393
BssMI GATC 2 cut(s) 85, 160
Bst6I CTCTTC 1 cut(s) 507
BstC8I GCNNGC 1 cut(s) 288
BstF5I GGATG 1 cut(s) 478
BstFNI CGCG 1 cut(s) 273
BstKTI GATC 2 cut(s) 88, 163
BstMAI GTCTC 1 cut(s) 273
BstMBI GATC 2 cut(s) 85, 160
BstSCI CCNGG 1 cut(s) 325
BstSLI GKGCMC 1 cut(s) 236
BstUI CGCG 1 cut(s) 273
BsuRI GGCC 1 cut(s) 76
BtsCI GGATG 1 cut(s) 478
Cac8I GCNNGC 1 cut(s) 288
Csp6I GTAC 2 cut(s) 384, 456
CviAII CATG 1 cut(s) 140
CviJI RGCY 5 cut(s) 76, 128, 325, 366, 435
CviKI_1 RGCY 5 cut(s) 76, 128, 325, 366, 435
CviQI GTAC 2 cut(s) 384, 456
DpnI GATC 2 cut(s) 87, 162
DpnII GATC 2 cut(s) 85, 160
Eam1104I CTCTTC 1 cut(s) 507
EarI CTCTTC 1 cut(s) 507
Eco57I CTGAAG 1 cut(s) 415
EcoRI GAATTC 1 cut(s) 185
FaeI CATG 1 cut(s) 143
FaiI YATR 8 cut(s) 42, 107, 141, 221, 266, 378, 410, 509
FatI CATG 1 cut(s) 139
FblI GTMKAC 1 cut(s) 168
FokI GGATG 1 cut(s) 485
FspBI CTAG 5 cut(s) 56, 164, 174, 398, 417
GsuI CTGGAG 1 cut(s) 364
HaeIII GGCC 1 cut(s) 76
HapII CCGG 1 cut(s) 327
Hin1II CATG 1 cut(s) 143
HincII GTYRAC 1 cut(s) 414
HindII GTYRAC 1 cut(s) 414
HinfI GANTC 3 cut(s) 170, 307, 443
HpaII CCGG 1 cut(s) 327
HphI GGTGA 2 cut(s) 237, 539
Hpy166II GTNNAC 4 cut(s) 8, 169, 234, 414
Hpy188I TCNGA 2 cut(s) 85, 184
Hpy188III TCNNGA 3 cut(s) 56, 119, 174
Hpy8I GTNNAC 4 cut(s) 8, 169, 234, 414
HpyAV CCTTC 2 cut(s) 92, 498
HpyCH4IV ACGT 1 cut(s) 151
HpyCH4V TGCA 4 cut(s) 139, 234, 290, 476
HpySE526I ACGT 1 cut(s) 151
Hsp92II CATG 1 cut(s) 143
Kzo9I GATC 2 cut(s) 85, 160
LpnPI CCDG 9 cut(s) 26, 276, 324, 328, 340, 372, 376, 406, 462
LweI GCATC 1 cut(s) 463
MaeI CTAG 5 cut(s) 56, 164, 174, 398, 417
MaeII ACGT 1 cut(s) 151
MaeIII GTNAC 3 cut(s) 304, 329, 358
MalI GATC 2 cut(s) 87, 162
MboI GATC 2 cut(s) 85, 160
MboII GAAGA 3 cut(s) 107, 209, 494
MhlI GDGCHC 1 cut(s) 236
MluCI AATT 6 cut(s) 60, 79, 122, 185, 210, 482
MlyI GAGTC 3 cut(s) 164, 301, 437
MnlI CCTC 2 cut(s) 187, 413
MspA1I CMGCKG 1 cut(s) 69
MspI CCGG 1 cut(s) 327
MspR9I CCNGG 1 cut(s) 327
Mva1269I GAATGC 1 cut(s) 288
MvnI CGCG 1 cut(s) 273
NciI CCSGG 1 cut(s) 327
NdeII GATC 2 cut(s) 85, 160
NlaIII CATG 1 cut(s) 143
NlaIV GGNNCC 1 cut(s) 391
NmuCI GTSAC 1 cut(s) 304
PctI GAATGC 1 cut(s) 288
PleI GAGTC 3 cut(s) 164, 301, 437
PpsI GAGTC 3 cut(s) 164, 301, 437
PspN4I GGNNCC 1 cut(s) 391
RsaI GTAC 2 cut(s) 385, 457
RsaNI GTAC 2 cut(s) 384, 456
Sau3AI GATC 2 cut(s) 85, 160
ScaI AGTACT 1 cut(s) 385
SchI GAGTC 3 cut(s) 164, 301, 437
ScrFI CCNGG 1 cut(s) 327
SduI GDGCHC 1 cut(s) 236
SetI ASST 6 cut(s) 15, 154, 265, 437, 490, 539
SfaNI GCATC 1 cut(s) 463
Sse9I AATT 6 cut(s) 60, 79, 122, 185, 210, 482
SsiI CCGC 1 cut(s) 69
SspMI CTAG 5 cut(s) 56, 164, 174, 398, 417
StyD4I CCNGG 1 cut(s) 325
TaiI ACGT 1 cut(s) 154
TasI AATT 6 cut(s) 60, 79, 122, 185, 210, 482
TatI WGTACW 2 cut(s) 383, 455
TseFI GTSAC 1 cut(s) 304
Tsp45I GTSAC 1 cut(s) 304
TspDTI ATGAA 1 cut(s) 156
VneI GTGCAC 1 cut(s) 232
XapI RAATTY 2 cut(s) 79, 185
XbaI TCTAGA 2 cut(s) 55, 173
XcmI CCANNNNNNNNNTGG 1 cut(s) 374
XmiI GTMKAC 1 cut(s) 168
XspI CTAG 5 cut(s) 56, 164, 174, 398, 417
ZrmI AGTACT 1 cut(s) 385
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.