Rmu_sc0001296.1_g000003

Di-glucose binding within endoplasmic reticulum

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001296.1
OG0000088
Physical Location & Seq
Reverse (-)
6329 .. 14214
7886 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001296.1_g000003.1.cds

Sequence Viewer

Length: 3132 bp
atgaagcaagtagctaccttctctttcggtagaatatgtgatgactacttctacttctgtcttatcttcttcctgggttgcttctggttccatgcttccactgcccaaaatgctactacggacccaaccgaagtggcggcgttgaactctatattactacaatgggacgcgccagcggtgcctctgtggaacatcagtggagagccatgcagtggatcggccatcaatggcaccgccttcgaggacggcctcaataacccagccatcacttgcgactgtagttttgaaagtaacaccacctgccatatcactcaattgagagtttatgctttggacaaaacaggagtgttacctgaagaacttgtggctttgaaatatcttacttttttcaaaatcgatcagaactttttcaccggtcccctaccagcatggattggcaacatgtctgagttgactacgttgtcgattgcccacaatgacttctatggacccatccccaaggagcttggaaaccttcagaaactaaatctgctgtcctttggaataaataatttctctggaacactgcctccagaacttggtaatttagtcaatctcgaagagctttacataaacagctgtggacttggtggtgaaattccttcaacatttgctaaacttaaaaaaatgcgaatcctaggggcatcagacagtcctttctcaggaaagataccggatttcatagggaattggacaaagttaacctccttgagatttgaagggaattcttttgaaggcccaataccaagcagtttttctcagttgacctcaatgaattctctacgaatcagtgatatctgtaatgtgagctcctctcttgacttcataaagaatttgaagaaattgactgatttagctcttcgaaatgccttagtcactggccgcatcccttctgatattagagaatatcaaagtttaaatatactggatttgggtttcaacaatataacaggtcaactcccaagtgacttgttcaacatgagttctctcacatccttatttcttggaaataatagtttgtctggagttctgcctagccaaaagagtgatcgtcttcaaaccatagatttatcttataactatttatcaggaagtcttcccccatgggtaaccacaatatcgcaactgaacttggtggtcaacaacttcacttttaacgaaagttcagaaataatgtttcccggattgaattgccttcaaagaaattttccttgcaatagatatcccccgcgctatgcaaacttctcaatcaactgtggaggaccagacatgaaaggaagtgatggcatattatatgaggcagaaaactcaactcttggcccagcaacatataatgtaaccagtacagagaaatgggctgttagcaatgtgggtttgtttgctgagaggaagaatccaagctatttgctaacctccttggcacaggttactgggtcggatgtgaccccagagcttttccagactgcaagattatctgcaggatcactgagatactacggcttgggtctccagaatgggccttatacagtaaaattacaatttgcagaaatggtttttgatgatcgtgcatcacaaacttggaaaagtttaggaaggcgagtatttgatatctatattcaggggcatctagtagtgaaggactttgacatatccaaggaggcaggtggtgttttaagagtagcagcgaaaaacttcaatgtaaacgtgtcggacaattatgttgaaattcatttgttctgggcgggtaaggggacctgctgcatacctaatcaaggtgattatggtccactaatatcaacggtcaatgctgttccagattttaaaccaactgtttctgggattccaccaactactccaggaaagaagagcatgacaggggtgattgttggcgttgcagtctctgtcggagttgtgagcttgctattaatatttgcagttttatatttgaggagaaaaataccagacaaagatgacgatgaagaacttcaaggattagacccgcgaccaaatacattcagttatagtgagttaaaagctgcaacaggagattttaatctttcaaataaactaggggagggaggatatggcgccgtttacaagggcatactttctgaagcaaggttagtggctgtgaagcaactttcagtagcatctcaccaagggaagagtcaatttgcagcagaaattgctgccatatctgcagtgcaacatcgcaatctagtgaaactgtatggatgctgtatcgaaggaaaccagcgaattttggtttatgaatatcttgaaaacaagagccttgatcaggcactttttggaaacaacttgcatcttgattggcataccagattcaatatcttgttgggaacagcaagaggacttgcctatcttcatgaggagtcgaggccaaggattgtacatagagatgtcaaagccagtaatattttgcttgatgcagacctctgcccaaaaatatcagattttggactggcaaagctttatgatgatgagaaaacccacatcagcacccgagttgcagggacaataggctatttggcaccggagtatgcaatgcggggacatctgactgaaaaggctgatgtattcggttttggagttgtcattttggagactcttagtggcagaccaaacactgacaatgacttggatgccggagagatttatctccttgattgggcatggactctacatgaaaaaaatgagcgtttggggcttgtggatccgagactgaccgactttgatgaagaagaagcaaatagattgataagattagctttcctgtgtactcaggcatccccattgatgcggccatctatgtctcgtgtggtggccatgcttgctggagatattgaagtaggtaatgttatggcaaagccaagttatttgacagactgggatttcaaagatgtaacaggaagcttcttgattgatggtggtaccccctcaactgggatgactcaccccaacaatcagtctactggcatcacaaccggtgctaacaccggaattgacctgatgcagtctcctgtgaattctaatcattcattgctcactgggattttaggagaaggaaggtga

Protein Analysis

1043

Amino Acids

114.35

Weight (kDa)

5.31

Isoelectric Point (pI)

31.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1116
AarI CACCTGC 2 cut(s) 308, 1691
AasI GACNNNNNNGTC 1 cut(s) 460
Acc36I ACCTGC 3 cut(s) 308, 1691, 1802
Acc65I GGTACC 1 cut(s) 2990
AccB1I GGYRCC 5 cut(s) 178, 230, 2126, 2590, 2990
AccB7I CCANNNNNTGG 2 cut(s) 212, 578
AccI GTMKAC 1 cut(s) 3029
AccII CGCG 3 cut(s) 170, 1270, 2041
AciI CCGC 9 cut(s) 137, 176, 234, 922, 1268, 1781, 2039, 2608, 2860
AclWI GGATC 4 cut(s) 223, 1528, 2768, 2781
AcoI YGGCCR 4 cut(s) 219, 919, 2861, 2883
AcsI RAATTY 8 cut(s) 636, 763, 814, 871, 1243, 1764, 2298, 3085
AcuI CTGAAG 3 cut(s) 375, 500, 2172
AcyI GRCGYC 1 cut(s) 2127
AfaI GTAC 4 cut(s) 1384, 2451, 2839, 2992
AfiI CCNNNNNNNGG 8 cut(s) 212, 578, 701, 1811, 2338, 2728, 3002, 3003
AflIII ACRYGT 2 cut(s) 441, 1743
AgeI ACCGGT 2 cut(s) 413, 3044
AjnI CCWGG 2 cut(s) 72, 1894
AjuI GAANNNNNNNTTGG 2 cut(s) 778, 810
AloI GAACNNNNNNTCC 2 cut(s) 553, 585
Alw21I GWGCWC 1 cut(s) 851
Alw26I GTCTC 6 cut(s) 1550, 1942, 2657, 2773, 2877, 3081
AlwI GGATC 4 cut(s) 223, 1528, 2768, 2781
AlwNI CAGNNNCTG 1 cut(s) 1940
Ama87I CYCGRG 1 cut(s) 2562
AoxI GGCC 9 cut(s) 219, 247, 775, 919, 1357, 1556, 2438, 2861, 2883
ApeKI GCWGC 5 cut(s) 1721, 1797, 2075, 2216, 2228
ApoI RAATTY 8 cut(s) 636, 763, 814, 871, 1243, 1764, 2298, 3085
ArsI GACNNNNNNTTYG 2 cut(s) 266, 298
AseI ATTAAT 1 cut(s) 1964
AsiGI ACCGGT 2 cut(s) 413, 3044
Asp700I GAANNNNTTC 3 cut(s) 407, 1730, 2022
Asp718I GGTACC 1 cut(s) 2990
AspA2I CCTAGG 1 cut(s) 676
AspLEI GCGC 3 cut(s) 172, 1272, 2129
AspS9I GGNCC 9 cut(s) 121, 416, 488, 776, 1301, 1358, 1556, 1791, 1823
AsuC2I CCSGG 1 cut(s) 1221
AsuHPI GGTGA 6 cut(s) 403, 644, 1826, 1930, 2186, 3005
AsuII TTCGAA 1 cut(s) 901
AvaI CYCGRG 1 cut(s) 2562
AvaII GGWCC 6 cut(s) 121, 416, 488, 1301, 1791, 1823
AvrII CCTAGG 1 cut(s) 676
BalI TGGCCA 1 cut(s) 2885
BamHI GGATCC 1 cut(s) 2773
BanI GGYRCC 5 cut(s) 178, 230, 2126, 2590, 2990
BanII GRGCYC 1 cut(s) 851
BarI GAAGNNNNNNTAC 2 cut(s) 765, 797
BauI CACGAG 1 cut(s) 2874
BbsI GAAGAC 2 cut(s) 1085, 1127
Bbv12I GWGCWC 1 cut(s) 851
BbvI GCAGC 5 cut(s) 1733, 1784, 2062, 2215, 2228
BccI CCATC 6 cut(s) 230, 272, 500, 1316, 2872, 2978
BceAI ACGGC 3 cut(s) 262, 1552, 2114
BcgI CGANNNNNNTGC 2 cut(s) 220, 254
BciT130I CCWGG 2 cut(s) 74, 1896
BclI TGATCA 1 cut(s) 2335
BcnI CCSGG 1 cut(s) 1221
BcoDI GTCTC 6 cut(s) 1550, 1942, 2657, 2773, 2877, 3081
BfaI CTAG 5 cut(s) 677, 1074, 1667, 2108, 2258
BfmI CTRYAG 3 cut(s) 277, 1515, 2238
BfoI RGCGCY 1 cut(s) 2130
BfuAI ACCTGC 3 cut(s) 308, 1691, 1802
BisI GCNGC 8 cut(s) 138, 922, 1722, 1798, 2076, 2217, 2229, 2861
BlnI CCTAGG 1 cut(s) 676
BlsI GCNGC 8 cut(s) 139, 923, 1723, 1799, 2077, 2218, 2230, 2862
Bme1390I CCNGG 3 cut(s) 74, 1221, 1896
Bme18I GGWCC 6 cut(s) 121, 416, 488, 1301, 1791, 1823
BmeT110I CYCGRG 1 cut(s) 2562
BmgT120I GGNCC 9 cut(s) 121, 416, 488, 776, 1301, 1358, 1556, 1791, 1823
BmrFI CCNGG 3 cut(s) 74, 1221, 1896
BmrI ACTGGG 4 cut(s) 1479, 2956, 3012, 3117
BmuI ACTGGG 4 cut(s) 1479, 2956, 3012, 3117
BpiI GAAGAC 2 cut(s) 1085, 1127
BplI GAGNNNNNCTC 2 cut(s) 838, 870
BpmI CTGGAG 5 cut(s) 555, 1083, 1532, 1878, 2916
Bpu14I TTCGAA 1 cut(s) 901
BpuEI CTTGAG 1 cut(s) 769
BpuMI CCSGG 1 cut(s) 1221
Bsa29I ATCGAT 1 cut(s) 396
BsaBI GATNNNNATC 1 cut(s) 2091
BsaHI GRCGYC 1 cut(s) 2127
BsaI GGTCTC 1 cut(s) 1550
BsaJI CCNNGG 8 cut(s) 73, 498, 676, 1142, 1455, 1692, 2197, 2441
BsaWI WCCGGW 5 cut(s) 413, 712, 2593, 3044, 3056
BsaXI ACNNNNNCTCC 2 cut(s) 553, 583
Bsc4I CCNNNNNNNGG 8 cut(s) 212, 578, 701, 1811, 2338, 2728, 3002, 3003
Bse118I RCCGGY 2 cut(s) 413, 3044
Bse3DI GCAATG 3 cut(s) 1411, 2610, 3098
Bse8I GATNNNNATC 1 cut(s) 2091
BseBI CCWGG 2 cut(s) 74, 1896
BseCI ATCGAT 1 cut(s) 396
BseDI CCNNGG 8 cut(s) 73, 498, 676, 1142, 1455, 1692, 2197, 2441
BseGI GGATG 8 cut(s) 492, 924, 1031, 1483, 2279, 2707, 2846, 3012
BseJI GATNNNNATC 1 cut(s) 2091
BseLI CCNNNNNNNGG 8 cut(s) 212, 578, 701, 1811, 2338, 2728, 3002, 3003
BseMI GCAATG 3 cut(s) 1411, 2610, 3098
BseMII CTCAG 6 cut(s) 438, 714, 812, 1413, 1517, 2855
BseRI GAGGAG 3 cut(s) 841, 2002, 2444
BseXI GCAGC 5 cut(s) 1733, 1784, 2062, 2215, 2228
BseYI CCCAGC 2 cut(s) 259, 1360
Bsh1236I CGCG 3 cut(s) 170, 1270, 2041
BshFI GGCC 9 cut(s) 221, 249, 777, 921, 1359, 1558, 2440, 2863, 2885
BshNI GGYRCC 5 cut(s) 178, 230, 2126, 2590, 2990
BshTI ACCGGT 2 cut(s) 413, 3044
BshVI ATCGAT 1 cut(s) 396
BsiHKAI GWGCWC 1 cut(s) 851
BsiHKCI CYCGRG 1 cut(s) 2562
BsiSI CCGG 7 cut(s) 414, 713, 1221, 2594, 2706, 3045, 3057
BslFI GGGAC 5 cut(s) 179, 402, 1804, 2587, 2625
BslI CCNNNNNNNGG 8 cut(s) 212, 578, 701, 1811, 2338, 2728, 3002, 3003
BsmAI GTCTC 6 cut(s) 1550, 1942, 2657, 2773, 2877, 3081
BsmFI GGGAC 5 cut(s) 179, 402, 1804, 2587, 2625
BsnI GGCC 9 cut(s) 221, 249, 777, 921, 1359, 1558, 2440, 2863, 2885
Bso31I GGTCTC 1 cut(s) 1550
BsoBI CYCGRG 1 cut(s) 2562
Bsp119I TTCGAA 1 cut(s) 901
Bsp1286I GDGCHC 1 cut(s) 851
Bsp1407I TGTACA 1 cut(s) 2449
Bsp143I GATC 7 cut(s) 215, 397, 1087, 1520, 1600, 2335, 2773
Bsp19I CCATGG 1 cut(s) 1142
BspACI CCGC 9 cut(s) 137, 176, 234, 922, 1268, 1781, 2039, 2608, 2860
BspANI GGCC 9 cut(s) 221, 249, 777, 921, 1359, 1558, 2440, 2863, 2885
BspCNI CTCAG 6 cut(s) 439, 713, 811, 1414, 1518, 2854
BspDI ATCGAT 1 cut(s) 396
BspFNI CGCG 3 cut(s) 170, 1270, 2041
BspHI TCATGA 1 cut(s) 2425
BspMAI CTGCAG 2 cut(s) 1519, 2242
BspMI ACCTGC 3 cut(s) 308, 1691, 1802
BspPI GGATC 4 cut(s) 223, 1528, 2768, 2781
BspQI GCTCTTC 3 cut(s) 594, 903, 1898
BspT104I TTCGAA 1 cut(s) 901
BspT107I GGYRCC 5 cut(s) 178, 230, 2126, 2590, 2990
BspTNI GGTCTC 1 cut(s) 1550
BsrDI GCAATG 3 cut(s) 1411, 2610, 3098
BsrFI RCCGGY 2 cut(s) 413, 3044
BsrGI TGTACA 1 cut(s) 2449
BssAI RCCGGY 2 cut(s) 413, 3044
BssECI CCNNGG 8 cut(s) 73, 498, 676, 1142, 1455, 1692, 2197, 2441
BssMI GATC 7 cut(s) 215, 397, 1087, 1520, 1600, 2335, 2773
BssNI GRCGYC 1 cut(s) 2127
BssSI CACGAG 1 cut(s) 2874
BssT1I CCWWGG 7 cut(s) 498, 676, 1142, 1455, 1692, 2197, 2441
Bst2BI CACGAG 1 cut(s) 2874
Bst2UI CCWGG 2 cut(s) 74, 1896
Bst4CI ACNGT 7 cut(s) 278, 692, 1295, 1567, 1840, 1870, 2268
Bst6I CTCTTC 4 cut(s) 594, 903, 1898, 2198
BstACI GRCGYC 1 cut(s) 2127
BstAPI GCANNNNNTGC 1 cut(s) 2225
BstAUI TGTACA 1 cut(s) 2449
BstBI TTCGAA 1 cut(s) 901
BstC8I GCNNGC 3 cut(s) 174, 1958, 2892
BstDEI CTNAG 8 cut(s) 447, 700, 798, 910, 1422, 1526, 2669, 2841
BstDSI CCRYGG 1 cut(s) 1142
BstEII GGTNACC 1 cut(s) 1147
BstENI CCTNNNNNAGG 3 cut(s) 699, 1809, 2336
BstF5I GGATG 8 cut(s) 492, 924, 1031, 1483, 2279, 2707, 2846, 3012
BstFNI CGCG 3 cut(s) 170, 1270, 2041
BstH2I RGCGCY 1 cut(s) 2130
BstHHI GCGC 3 cut(s) 172, 1272, 2129
BstKTI GATC 7 cut(s) 218, 400, 1090, 1523, 1603, 2338, 2776
BstMAI GTCTC 6 cut(s) 1550, 1942, 2657, 2773, 2877, 3081
BstMBI GATC 7 cut(s) 215, 397, 1087, 1520, 1600, 2335, 2773
BstMWI GCNNNNNNNGC 7 cut(s) 101, 110, 178, 2225, 2237, 2764, 2891
BstNI CCWGG 2 cut(s) 74, 1896
BstNSI RCATGY 1 cut(s) 445
BstPI GGTNACC 1 cut(s) 1147
BstSCI CCNGG 3 cut(s) 72, 1219, 1894
BstSFI CTRYAG 3 cut(s) 277, 1515, 2238
BstUI CGCG 3 cut(s) 170, 1270, 2041
BstV1I GCAGC 5 cut(s) 1733, 1784, 2062, 2215, 2228
BstV2I GAAGAC 2 cut(s) 1085, 1127
BstX2I RGATCY 1 cut(s) 2773
BstYI RGATCY 1 cut(s) 2773
Bsu15I ATCGAT 1 cut(s) 396
BsuRI GGCC 9 cut(s) 221, 249, 777, 921, 1359, 1558, 2440, 2863, 2885
BsuTUI ATCGAT 1 cut(s) 396
BtgI CCRYGG 1 cut(s) 1142
BtgZI GCGATG 1 cut(s) 2234
BtsCI GGATG 8 cut(s) 492, 924, 1031, 1483, 2279, 2707, 2846, 3012
BtsI GCAGTG 4 cut(s) 99, 217, 563, 2247
BveI ACCTGC 3 cut(s) 308, 1691, 1802
Cac8I GCNNGC 3 cut(s) 174, 1958, 2892
CaiI CAGNNNCTG 1 cut(s) 1940
CciI TCATGA 1 cut(s) 2425
CfoI GCGC 3 cut(s) 172, 1272, 2129
Cfr10I RCCGGY 2 cut(s) 413, 3044
Cfr13I GGNCC 9 cut(s) 121, 416, 488, 776, 1301, 1358, 1556, 1791, 1823
ClaI ATCGAT 1 cut(s) 396
CseI GACGC 1 cut(s) 176
Csp6I GTAC 4 cut(s) 1383, 2450, 2838, 2991
CspAI ACCGGT 2 cut(s) 413, 3044
CspCI CAANNNNNGTGG 4 cut(s) 114, 149, 2145, 2180
CviQI GTAC 4 cut(s) 1383, 2450, 2838, 2991
DdeI CTNAG 8 cut(s) 447, 700, 798, 910, 1422, 1526, 2669, 2841
DinI GGCGCC 1 cut(s) 2128
DpnI GATC 7 cut(s) 217, 399, 1089, 1522, 1602, 2337, 2775
DpnII GATC 7 cut(s) 215, 397, 1087, 1520, 1600, 2335, 2773
DraI TTTAAA 2 cut(s) 957, 1861
DrdI GACNNNNNNGTC 1 cut(s) 460
DseDI GACNNNNNNGTC 1 cut(s) 460
EaeI YGGCCR 4 cut(s) 219, 919, 2861, 2883
Eam1104I CTCTTC 4 cut(s) 594, 903, 1898, 2198
EarI CTCTTC 4 cut(s) 594, 903, 1898, 2198
Ecl136II GAGCTC 1 cut(s) 849
Eco130I CCWWGG 7 cut(s) 498, 676, 1142, 1455, 1692, 2197, 2441
Eco24I GRGCYC 1 cut(s) 851
Eco31I GGTCTC 1 cut(s) 1550
Eco32I GATATC 3 cut(s) 835, 1262, 1648
Eco47I GGWCC 6 cut(s) 121, 416, 488, 1301, 1791, 1823
Eco53kI GAGCTC 1 cut(s) 849
Eco57I CTGAAG 3 cut(s) 375, 500, 2172
Eco88I CYCGRG 1 cut(s) 2562
Eco91I GGTNACC 1 cut(s) 1147
EcoICRI GAGCTC 1 cut(s) 849
EcoNI CCTNNNNNAGG 3 cut(s) 699, 1809, 2336
EcoO109I RGGNCCY 1 cut(s) 1791
EcoO65I GGTNACC 1 cut(s) 1147
EcoRI GAATTC 3 cut(s) 763, 814, 3085
EcoRII CCWGG 2 cut(s) 72, 1894
EcoRV GATATC 3 cut(s) 835, 1262, 1648
EcoT14I CCWWGG 7 cut(s) 498, 676, 1142, 1455, 1692, 2197, 2441
EcoT38I GRGCYC 1 cut(s) 851
EgeI GGCGCC 1 cut(s) 2128
EheI GGCGCC 1 cut(s) 2128
ErhI CCWWGG 7 cut(s) 498, 676, 1142, 1455, 1692, 2197, 2441
FalI AAGNNNNNCTT 2 cut(s) 2812, 2844
FaqI GGGAC 5 cut(s) 179, 402, 1804, 2587, 2625
FauI CCCGC 4 cut(s) 1275, 1774, 2046, 2601
FbaI TGATCA 1 cut(s) 2335
FblI GTMKAC 1 cut(s) 3029
Fnu4HI GCNGC 8 cut(s) 138, 922, 1722, 1798, 2076, 2217, 2229, 2861
FokI GGATG 8 cut(s) 479, 911, 1018, 1490, 2286, 2714, 2833, 3019
FriOI GRGCYC 1 cut(s) 851
Fsp4HI GCNGC 8 cut(s) 138, 922, 1722, 1798, 2076, 2217, 2229, 2861
FspBI CTAG 5 cut(s) 677, 1074, 1667, 2108, 2258
GlaI GCGC 3 cut(s) 171, 1271, 2128
GluI GCNGC 8 cut(s) 138, 922, 1722, 1798, 2076, 2217, 2229, 2861
GsaI CCCAGC 2 cut(s) 263, 1364
GsuI CTGGAG 5 cut(s) 555, 1083, 1532, 1878, 2916
HaeII RGCGCY 1 cut(s) 2130
HaeIII GGCC 9 cut(s) 221, 249, 777, 921, 1359, 1558, 2440, 2863, 2885
HapII CCGG 7 cut(s) 414, 713, 1221, 2594, 2706, 3045, 3057
HgaI GACGC 1 cut(s) 176
HhaI GCGC 3 cut(s) 172, 1272, 2129
Hin1I GRCGYC 1 cut(s) 2127
Hin6I GCGC 3 cut(s) 170, 1270, 2127
HinP1I GCGC 3 cut(s) 170, 1270, 2127
HincII GTYRAC 5 cut(s) 453, 741, 804, 995, 1180
HindII GTYRAC 5 cut(s) 453, 741, 804, 995, 1180
HindIII AAGCTT 2 cut(s) 2528, 2971
HpaI GTTAAC 1 cut(s) 741
HpaII CCGG 7 cut(s) 414, 713, 1221, 2594, 2706, 3045, 3057
HphI GGTGA 6 cut(s) 403, 644, 1826, 1930, 2186, 3005
HpyCH4III ACNGT 7 cut(s) 278, 692, 1295, 1567, 1840, 1870, 2268
HpyCH4IV ACGT 2 cut(s) 458, 1743
HpyF10VI GCNNNNNNNGC 7 cut(s) 101, 110, 178, 2225, 2237, 2764, 2891
HpyF3I CTNAG 8 cut(s) 447, 700, 798, 910, 1422, 1526, 2669, 2841
HpySE526I ACGT 2 cut(s) 458, 1743
Hsp92I GRCGYC 1 cut(s) 2127
HspAI GCGC 3 cut(s) 170, 1270, 2127
KasI GGCGCC 1 cut(s) 2126
KpnI GGTACC 1 cut(s) 2994
Ksp22I TGATCA 1 cut(s) 2335
KspAI GTTAAC 1 cut(s) 741
Kzo9I GATC 7 cut(s) 215, 397, 1087, 1520, 1600, 2335, 2773
LguI GCTCTTC 3 cut(s) 594, 903, 1898
LmnI GCTCC 2 cut(s) 502, 854
Lsp1109I GCAGC 5 cut(s) 1733, 1784, 2062, 2215, 2228
MaeI CTAG 5 cut(s) 677, 1074, 1667, 2108, 2258
MaeII ACGT 2 cut(s) 458, 1743
MaeIII GTNAC 9 cut(s) 290, 348, 913, 1004, 1147, 1375, 1465, 1480, 2962
MalI GATC 7 cut(s) 217, 399, 1089, 1522, 1602, 2337, 2775
MboI GATC 7 cut(s) 215, 397, 1087, 1520, 1600, 2335, 2773
MfeI CAATTG 1 cut(s) 314
MflI RGATCY 1 cut(s) 2773
MhlI GDGCHC 1 cut(s) 851
MlsI TGGCCA 1 cut(s) 2885
MluNI TGGCCA 1 cut(s) 2885
Mly113I GGCGCC 1 cut(s) 2127
MlyI GAGTC 5 cut(s) 2215, 2441, 2659, 2731, 3004
MmeI TCCRAC 3 cut(s) 1455, 1728, 1924
Mox20I TGGCCA 1 cut(s) 2885
MroXI GAANNNNTTC 3 cut(s) 407, 1730, 2022
MscI TGGCCA 1 cut(s) 2885
MseI TTAA 9 cut(s) 660, 740, 956, 1194, 1712, 1860, 1964, 2069, 2091
MslI CAYNNNNRTG 1 cut(s) 2457
Msp20I TGGCCA 1 cut(s) 2885
MspA1I CMGCKG 2 cut(s) 176, 618
MspI CCGG 7 cut(s) 414, 713, 1221, 2594, 2706, 3045, 3057
MspR9I CCNGG 3 cut(s) 74, 1221, 1896
MunI CAATTG 1 cut(s) 314
MvaI CCWGG 2 cut(s) 74, 1896
MvnI CGCG 3 cut(s) 170, 1270, 2041
MwoI GCNNNNNNNGC 7 cut(s) 101, 110, 178, 2225, 2237, 2764, 2891
NarI GGCGCC 1 cut(s) 2127
NciI CCSGG 1 cut(s) 1221
NcoI CCATGG 1 cut(s) 1142
NdeII GATC 7 cut(s) 215, 397, 1087, 1520, 1600, 2335, 2773
NmuCI GTSAC 3 cut(s) 913, 1004, 1480
NspI RCATGY 1 cut(s) 445
NspV TTCGAA 1 cut(s) 901
PagI TCATGA 1 cut(s) 2425
PaqCI CACCTGC 2 cut(s) 308, 1691
PciI ACATGT 1 cut(s) 441
PciSI GCTCTTC 3 cut(s) 594, 903, 1898
PdmI GAANNNNTTC 3 cut(s) 407, 1730, 2022
PfeI GAWTC 5 cut(s) 672, 825, 1432, 1879, 2382
PflMI CCANNNNNTGG 2 cut(s) 212, 578
PfoI TCCNGGA 2 cut(s) 1219, 1894
PinAI ACCGGT 2 cut(s) 413, 3044
PkrI GCNGC 8 cut(s) 139, 923, 1723, 1799, 2077, 2218, 2230, 2862
PleI GAGTC 5 cut(s) 2214, 2440, 2659, 2731, 3004
PluTI GGCGCC 1 cut(s) 2130
PpsI GAGTC 5 cut(s) 2214, 2440, 2659, 2731, 3004
PpuMI RGGWCCY 1 cut(s) 1791
PscI ACATGT 1 cut(s) 441
PshBI ATTAAT 1 cut(s) 1964
PsiI TTATAA 1 cut(s) 1116
Psp124BI GAGCTC 1 cut(s) 851
Psp5II RGGWCCY 1 cut(s) 1791
Psp6I CCWGG 2 cut(s) 72, 1894
PspEI GGTNACC 1 cut(s) 1147
PspFI CCCAGC 2 cut(s) 259, 1360
PspGI CCWGG 2 cut(s) 72, 1894
PspPI GGNCC 9 cut(s) 121, 416, 488, 776, 1301, 1358, 1556, 1791, 1823
PspPPI RGGWCCY 1 cut(s) 1791
PstI CTGCAG 2 cut(s) 1519, 2242
PstNI CAGNNNCTG 1 cut(s) 1940
PsuI RGATCY 1 cut(s) 2773
PvuII CAGCTG 1 cut(s) 618
RsaI GTAC 4 cut(s) 1384, 2451, 2839, 2992
RsaNI GTAC 4 cut(s) 1383, 2450, 2838, 2991
RseI CAYNNNNRTG 1 cut(s) 2457
SacI GAGCTC 1 cut(s) 851
SapI GCTCTTC 3 cut(s) 594, 903, 1898
SaqAI TTAA 9 cut(s) 660, 740, 956, 1194, 1712, 1860, 1964, 2069, 2091
SatI GCNGC 8 cut(s) 138, 922, 1722, 1798, 2076, 2217, 2229, 2861
Sau3AI GATC 7 cut(s) 215, 397, 1087, 1520, 1600, 2335, 2773
Sau96I GGNCC 9 cut(s) 121, 416, 488, 776, 1301, 1358, 1556, 1791, 1823
SchI GAGTC 5 cut(s) 2215, 2441, 2659, 2731, 3004
ScrFI CCNGG 3 cut(s) 74, 1221, 1896
SduI GDGCHC 1 cut(s) 851
SfcI CTRYAG 3 cut(s) 277, 1515, 2238
SfoI GGCGCC 1 cut(s) 2128
SfuI TTCGAA 1 cut(s) 901
SinI GGWCC 6 cut(s) 121, 416, 488, 1301, 1791, 1823
SmiMI CAYNNNNRTG 1 cut(s) 2457
SmlI CTYRAG 1 cut(s) 748
SmoI CTYRAG 1 cut(s) 748
SsiI CCGC 9 cut(s) 137, 176, 234, 922, 1268, 1781, 2039, 2608, 2860
SspDI GGCGCC 1 cut(s) 2126
SspI AATATT 2 cut(s) 1968, 2476
SspMI CTAG 5 cut(s) 677, 1074, 1667, 2108, 2258
SstI GAGCTC 1 cut(s) 851
StyD4I CCNGG 3 cut(s) 72, 1219, 1894
StyI CCWWGG 7 cut(s) 498, 676, 1142, 1455, 1692, 2197, 2441
TaaI ACNGT 7 cut(s) 278, 692, 1295, 1567, 1840, 1870, 2268
TaiI ACGT 2 cut(s) 461, 1746
TaqI TCGA 7 cut(s) 240, 396, 464, 597, 901, 2283, 2435
TaqII GACCGA 1 cut(s) 2801
TatI WGTACW 3 cut(s) 1382, 2449, 2837
TauI GCSGC 3 cut(s) 140, 924, 2863
TfiI GAWTC 5 cut(s) 672, 825, 1432, 1879, 2382
Tru1I TTAA 9 cut(s) 660, 740, 956, 1194, 1712, 1860, 1964, 2069, 2091
Tru9I TTAA 9 cut(s) 660, 740, 956, 1194, 1712, 1860, 1964, 2069, 2091
TseFI GTSAC 3 cut(s) 913, 1004, 1480
TseI GCWGC 5 cut(s) 1721, 1797, 2075, 2216, 2228
Tsp45I GTSAC 3 cut(s) 913, 1004, 1480
TspGWI ACGGA 1 cut(s) 134
Van91I CCANNNNNTGG 2 cut(s) 212, 578
VpaK11BI GGWCC 6 cut(s) 121, 416, 488, 1301, 1791, 1823
VspI ATTAAT 1 cut(s) 1964
XagI CCTNNNNNAGG 3 cut(s) 699, 1809, 2336
XapI RAATTY 8 cut(s) 636, 763, 814, 871, 1243, 1764, 2298, 3085
XceI RCATGY 1 cut(s) 445
XmaJI CCTAGG 1 cut(s) 676
XmiI GTMKAC 1 cut(s) 3029
XmnI GAANNNNTTC 3 cut(s) 407, 1730, 2022
XspI CTAG 5 cut(s) 677, 1074, 1667, 2108, 2258
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.