Rh5AG181600
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
20557058 .. 20581220
24163 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG181600.1

Sequence Viewer

Length: 1320 bp
ATGGGCAGCCTCTATCCAAATCGAGCTTCATATTCAACCGACCTCGGCGGGGGAATTGAAATCACAGTAAGAATTGGAGACTTGTCTTACAATAATCTAGTCGGGAGATTTCCTTCTTGGGTGAATGAAGAGTATTTACAGCTTAACTTAGTTGCCAACAACTTTAGCATCGAAACTTCAAACAGCAGTGGTCTGCCTTCAGGGTTGATTTGTCTTCAAAAAAACTTTCCCTGCATTCGCGGCCCTGGAATCAATTATAATTTTGGGATCAAATGTGGTGGTCCTCAGGTTAGATCTTCCAATGGAATTGTGTATGACAAGGAAAATGAGACCCTTGGTCCAGCTACATATATTGTCAATGACGAGAACAGATGGGGAGTTAGCAACACTGGAATTTTCACTCGGAGCAATAACAATCAGTATACAATTAACTCCTCCCTTCAATTCACAAGTACTTTTGATCCTGTGCTATTCCAAACTGCAAGACTCTCTGCTTCGTCACTAAGATATTATGGCTTGGGGCTTCAGAATGGTAATTACACCGTGAACCTCCAATTTGCAGAACAAGTTATCCTAGATTCTACTTCTTGGAGAAGTCTTGGGAGACGTGTTTTTGATATTTATATTCAGGGTATCCTGGTTTTGAAGGATTTTGATATACGAAAGGAGGCAGGGGCATCTCTCCTACCTCTTCGGAAGGAATACAAGGCTCATGTTTCAGAGAACTACCTTGAAATCCATCTCTTTTGGGCTGGAAAGGGGACTTGTTGTGTACCTGTTCCTGGTACTTATGGACCTGCTATTTCAGCCATCAGGGCCACACCAGATTTCATTCCTGATGACAATAACAATAATACAAATGAAAAGAAGATTAGGACATGGTTGATTGTGGGGTTTGCTATTGGTGGTGGAGTTTTACTTCTGGGATTACTTAGTGATGGAAGAGTTATTGCCGTGAAGCAATTGTCTGCAGCATCCCATCAAGGAAAGAACCAGTTTATAACTGAGATTGCTACTATATCTGCAGTGCAACACAATAACCTAGTGACTTTGTATGGATTCTGCACTGAGGGAGATAAGCGACTCCTTGTGTATGAGTATCTAGTGAACAAGAGTCTTGATCAAGCACTATTTGCGGCTGCACACCATCGATGCCGGAACTCACCGGTGAAAAAGGCCGATGACTGGAAGTGGCCACCAACGATTTTTTGGAAGAATTTTCATGAGTTGAAGTTGAGTCTCCGTCAATTCCTCTCACAATTGAAGAAGATCTCCTTCTCTAACATTACCAGTATGAGCCACATCAAAATTACTGCTTGA

Protein Analysis

439

Amino Acids

48.89

Weight (kDa)

9.07

Isoelectric Point (pI)

33.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 88 - 271 1.6e-40 Malectin domain
Pkinase PF00069 305 - 378 8.9e-09 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 315 - 380 8.4e-10 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 258, 1001
Acc36I ACCTGC 1 cut(s) 805
AccI GTMKAC 1 cut(s) 422
AccII CGCG 1 cut(s) 240
AciI CCGC 3 cut(s) 48, 240, 1136
AclWI GGATC 2 cut(s) 275, 455
AcoI YGGCCR 1 cut(s) 1193
AcsI RAATTY 2 cut(s) 393, 1216
AcuI CTGAAG 2 cut(s) 183, 509
AfaI GTAC 3 cut(s) 454, 774, 787
AfiI CCNNNNNNNGG 3 cut(s) 49, 782, 1185
AflIII ACRYGT 1 cut(s) 607
AgeI ACCGGT 1 cut(s) 1165
AgsI TTSAA 9 cut(s) 36, 59, 180, 218, 443, 646, 734, 1231, 1264
AhdI GACNNNNNGTC 1 cut(s) 336
AjiI CACGTC 1 cut(s) 608
AjnI CCWGG 3 cut(s) 244, 636, 781
AjuI GAANNNNNNNTTGG 2 cut(s) 10, 42
AloI GAACNNNNNNTCC 2 cut(s) 555, 587
AluBI AGCT 3 cut(s) 26, 142, 344
AluI AGCT 3 cut(s) 26, 142, 344
Alw26I GTCTC 4 cut(s) 72, 323, 598, 1244
AlwI GGATC 2 cut(s) 275, 455
AoxI GGCC 4 cut(s) 241, 816, 1176, 1193
ApeKI GCWGC 3 cut(s) 6, 971, 1139
ApoI RAATTY 2 cut(s) 393, 1216
AsiGI ACCGGT 1 cut(s) 1165
AspS9I GGNCC 5 cut(s) 242, 281, 338, 794, 816
AsuHPI GGTGA 3 cut(s) 133, 1155, 1180
AvaII GGWCC 3 cut(s) 281, 338, 794
AxyI CCTNAGG 1 cut(s) 285
BalI TGGCCA 1 cut(s) 1195
BarI GAAGNNNNNNTAC 2 cut(s) 120, 152
BbsI GAAGAC 1 cut(s) 206
BbvI GCAGC 3 cut(s) 18, 983, 1126
BccI CCATC 6 cut(s) 366, 747, 818, 932, 987, 1155
BceAI ACGGC 1 cut(s) 938
BciT130I CCWGG 3 cut(s) 246, 638, 783
BciVI GTATCC 1 cut(s) 644
BclI TGATCA 1 cut(s) 1120
BcoDI GTCTC 4 cut(s) 72, 323, 598, 1244
BfaI CTAG 4 cut(s) 98, 575, 1043, 1103
BfmI CTRYAG 2 cut(s) 969, 1023
BfuAI ACCTGC 1 cut(s) 805
BfuI GTATCC 1 cut(s) 644
BglI GCCNNNNNGGC 1 cut(s) 815
BglII AGATCT 2 cut(s) 293, 1269
BisI GCNGC 5 cut(s) 7, 241, 972, 1137, 1140
BlsI GCNGC 5 cut(s) 8, 242, 973, 1138, 1141
BmcAI AGTACT 1 cut(s) 454
Bme1390I CCNGG 3 cut(s) 246, 638, 783
Bme18I GGWCC 3 cut(s) 281, 338, 794
BmeRI GACNNNNNGTC 1 cut(s) 336
BmgBI CACGTC 1 cut(s) 608
BmgT120I GGNCC 5 cut(s) 242, 281, 338, 794, 816
BmrFI CCNGG 3 cut(s) 246, 638, 783
BmsI GCATC 4 cut(s) 177, 686, 983, 1142
BpiI GAAGAC 1 cut(s) 206
Bsa29I ATCGAT 1 cut(s) 1150
BsaI GGTCTC 1 cut(s) 323
BsaJI CCNNGG 3 cut(s) 43, 244, 334
BsaWI WCCGGW 1 cut(s) 1165
Bsc4I CCNNNNNNNGG 3 cut(s) 49, 782, 1185
Bse118I RCCGGY 1 cut(s) 1165
Bse1I ACTGG 4 cut(s) 394, 994, 1190, 1290
Bse21I CCTNAGG 1 cut(s) 285
BseBI CCWGG 3 cut(s) 246, 638, 783
BseCI ATCGAT 1 cut(s) 1150
BseDI CCNNGG 3 cut(s) 43, 244, 334
BseGI GGATG 1 cut(s) 974
BseLI CCNNNNNNNGG 3 cut(s) 49, 782, 1185
BseMII CTCAG 3 cut(s) 299, 996, 1059
BseNI ACTGG 4 cut(s) 394, 994, 1190, 1290
BseRI GAGGAG 1 cut(s) 424
BseXI GCAGC 3 cut(s) 18, 983, 1126
BsgI GTGCAG 2 cut(s) 1048, 1125
Bsh1236I CGCG 1 cut(s) 240
BshFI GGCC 4 cut(s) 243, 818, 1178, 1195
BshTI ACCGGT 1 cut(s) 1165
BshVI ATCGAT 1 cut(s) 1150
BsiSI CCGG 2 cut(s) 1156, 1166
BslFI GGGAC 1 cut(s) 775
BslI CCNNNNNNNGG 3 cut(s) 49, 782, 1185
BsmAI GTCTC 4 cut(s) 72, 323, 598, 1244
BsmBI CGTCTC 1 cut(s) 598
BsmFI GGGAC 1 cut(s) 775
BsmI GAATGC 1 cut(s) 234
BsnI GGCC 4 cut(s) 243, 818, 1178, 1195
Bso31I GGTCTC 1 cut(s) 323
Bsp143I GATC 5 cut(s) 267, 293, 460, 1120, 1269
BspACI CCGC 3 cut(s) 48, 240, 1136
BspANI GGCC 4 cut(s) 243, 818, 1178, 1195
BspCNI CTCAG 3 cut(s) 298, 997, 1060
BspDI ATCGAT 1 cut(s) 1150
BspFNI CGCG 1 cut(s) 240
BspHI TCATGA 1 cut(s) 1222
BspMAI CTGCAG 2 cut(s) 973, 1027
BspMI ACCTGC 1 cut(s) 805
BspPI GGATC 2 cut(s) 275, 455
BspTNI GGTCTC 1 cut(s) 323
BsrFI RCCGGY 1 cut(s) 1165
BsrI ACTGG 4 cut(s) 394, 994, 1190, 1290
BssAI RCCGGY 1 cut(s) 1165
BssECI CCNNGG 3 cut(s) 43, 244, 334
BssMI GATC 5 cut(s) 267, 293, 460, 1120, 1269
BssNAI GTATAC 1 cut(s) 423
BssT1I CCWWGG 1 cut(s) 334
Bst1107I GTATAC 1 cut(s) 423
Bst2UI CCWGG 3 cut(s) 246, 638, 783
Bst4CI ACNGT 2 cut(s) 67, 544
Bst6I CTCTTC 3 cut(s) 123, 696, 937
BstAPI GCANNNNNTGC 1 cut(s) 1133
BstDEI CTNAG 6 cut(s) 148, 285, 503, 932, 1005, 1068
BstF5I GGATG 1 cut(s) 974
BstFNI CGCG 1 cut(s) 240
BstKTI GATC 5 cut(s) 270, 296, 463, 1123, 1272
BstMAI GTCTC 4 cut(s) 72, 323, 598, 1244
BstMBI GATC 5 cut(s) 267, 293, 460, 1120, 1269
BstMWI GCNNNNNNNGC 4 cut(s) 240, 806, 815, 1133
BstNI CCWGG 3 cut(s) 246, 638, 783
BstSCI CCNGG 3 cut(s) 244, 636, 781
BstSFI CTRYAG 2 cut(s) 969, 1023
BstUI CGCG 1 cut(s) 240
BstV1I GCAGC 3 cut(s) 18, 983, 1126
BstV2I GAAGAC 1 cut(s) 206
BstX2I RGATCY 2 cut(s) 293, 1269
BstYI RGATCY 2 cut(s) 293, 1269
BstZ17I GTATAC 1 cut(s) 423
Bsu15I ATCGAT 1 cut(s) 1150
Bsu36I CCTNAGG 1 cut(s) 285
BsuI GTATCC 1 cut(s) 644
BsuRI GGCC 4 cut(s) 243, 818, 1178, 1195
BsuTUI ATCGAT 1 cut(s) 1150
BtrI CACGTC 1 cut(s) 608
BtsCI GGATG 1 cut(s) 974
BtsI GCAGTG 2 cut(s) 193, 1032
BtsIMutI CAGTG 4 cut(s) 193, 387, 1032, 1065
BveI ACCTGC 1 cut(s) 805
CciI TCATGA 1 cut(s) 1222
Cfr10I RCCGGY 1 cut(s) 1165
Cfr13I GGNCC 5 cut(s) 242, 281, 338, 794, 816
ClaI ATCGAT 1 cut(s) 1150
Csp6I GTAC 3 cut(s) 453, 773, 786
CspAI ACCGGT 1 cut(s) 1165
CspCI CAANNNNNGTGG 2 cut(s) 259, 294
CviAII CATG 3 cut(s) 713, 879, 1223
CviQI GTAC 3 cut(s) 453, 773, 786
DdeI CTNAG 6 cut(s) 148, 285, 503, 932, 1005, 1068
DpnI GATC 5 cut(s) 269, 295, 462, 1122, 1271
DpnII GATC 5 cut(s) 267, 293, 460, 1120, 1269
DriI GACNNNNNGTC 1 cut(s) 336
EaeI YGGCCR 1 cut(s) 1193
Eam1104I CTCTTC 3 cut(s) 123, 696, 937
Eam1105I GACNNNNNGTC 1 cut(s) 336
EarI CTCTTC 3 cut(s) 123, 696, 937
Eco130I CCWWGG 1 cut(s) 334
Eco31I GGTCTC 1 cut(s) 323
Eco47I GGWCC 3 cut(s) 281, 338, 794
Eco57I CTGAAG 2 cut(s) 183, 509
Eco81I CCTNAGG 1 cut(s) 285
EcoRII CCWGG 3 cut(s) 244, 636, 781
EcoT14I CCWWGG 1 cut(s) 334
ErhI CCWWGG 1 cut(s) 334
Esp3I CGTCTC 1 cut(s) 598
FaeI CATG 3 cut(s) 716, 882, 1226
FalI AAGNNNNNCTT 2 cut(s) 1259, 1291
FaqI GGGAC 1 cut(s) 775
FatI CATG 3 cut(s) 712, 878, 1222
FauI CCCGC 1 cut(s) 41
FbaI TGATCA 1 cut(s) 1120
FblI GTMKAC 1 cut(s) 422
Fnu4HI GCNGC 5 cut(s) 7, 241, 972, 1137, 1140
FokI GGATG 1 cut(s) 961
Fsp4HI GCNGC 5 cut(s) 7, 241, 972, 1137, 1140
FspBI CTAG 4 cut(s) 98, 575, 1043, 1103
GluI GCNGC 5 cut(s) 7, 241, 972, 1137, 1140
HaeIII GGCC 4 cut(s) 243, 818, 1178, 1195
HapII CCGG 2 cut(s) 1156, 1166
Hin1II CATG 3 cut(s) 716, 882, 1226
HinfI GANTC 7 cut(s) 249, 486, 578, 1059, 1083, 1114, 1237
HpaII CCGG 2 cut(s) 1156, 1166
HphI GGTGA 3 cut(s) 133, 1155, 1180
Hpy166II GTNNAC 4 cut(s) 423, 547, 773, 1108
Hpy188I TCNGA 4 cut(s) 405, 528, 696, 721
Hpy188III TCNNGA 4 cut(s) 103, 836, 1118, 1223
Hpy8I GTNNAC 4 cut(s) 423, 547, 773, 1108
HpyAV CCTTC 6 cut(s) 123, 207, 449, 640, 691, 1285
HpyCH4III ACNGT 2 cut(s) 67, 544
HpyCH4IV ACGT 1 cut(s) 607
HpyCH4V TGCA 8 cut(s) 234, 482, 560, 971, 1025, 1030, 1065, 1142
HpyF10VI GCNNNNNNNGC 4 cut(s) 240, 806, 815, 1133
HpyF3I CTNAG 6 cut(s) 148, 285, 503, 932, 1005, 1068
HpySE526I ACGT 1 cut(s) 607
Hsp92II CATG 3 cut(s) 716, 882, 1226
Ksp22I TGATCA 1 cut(s) 1120
Kzo9I GATC 5 cut(s) 267, 293, 460, 1120, 1269
LmnI GCTCC 1 cut(s) 405
Lsp1109I GCAGC 3 cut(s) 18, 983, 1126
LweI GCATC 4 cut(s) 177, 686, 983, 1142
MaeI CTAG 4 cut(s) 98, 575, 1043, 1103
MaeII ACGT 1 cut(s) 607
MaeIII GTNAC 2 cut(s) 498, 1045
MalI GATC 5 cut(s) 269, 295, 462, 1122, 1271
MboI GATC 5 cut(s) 267, 293, 460, 1120, 1269
MboII GAAGA 9 cut(s) 140, 206, 288, 683, 880, 954, 1225, 1276, 1279
MfeI CAATTG 2 cut(s) 962, 1259
MflI RGATCY 2 cut(s) 293, 1269
MlsI TGGCCA 1 cut(s) 1195
MluNI TGGCCA 1 cut(s) 1195
MlyI GAGTC 4 cut(s) 480, 1077, 1123, 1246
MnlI CCTC 9 cut(s) 20, 53, 294, 445, 560, 661, 699, 1063, 1262
Mox20I TGGCCA 1 cut(s) 1195
MscI TGGCCA 1 cut(s) 1195
MseI TTAA 2 cut(s) 144, 429
Msp20I TGGCCA 1 cut(s) 1195
MspI CCGG 2 cut(s) 1156, 1166
MspR9I CCNGG 3 cut(s) 246, 638, 783
MunI CAATTG 2 cut(s) 962, 1259
Mva1269I GAATGC 1 cut(s) 234
MvaI CCWGG 3 cut(s) 246, 638, 783
MvnI CGCG 1 cut(s) 240
MwoI GCNNNNNNNGC 4 cut(s) 240, 806, 815, 1133
NdeII GATC 5 cut(s) 267, 293, 460, 1120, 1269
NlaIII CATG 3 cut(s) 716, 882, 1226
NmeAIII GCCGAG 1 cut(s) 24
NmuCI GTSAC 2 cut(s) 498, 1045
PagI TCATGA 1 cut(s) 1222
PctI GAATGC 1 cut(s) 234
PfeI GAWTC 3 cut(s) 249, 578, 1059
PinAI ACCGGT 1 cut(s) 1165
PkrI GCNGC 5 cut(s) 8, 242, 973, 1138, 1141
PleI GAGTC 4 cut(s) 480, 1077, 1122, 1245
PpsI GAGTC 4 cut(s) 480, 1077, 1122, 1245
PsiI TTATAA 2 cut(s) 258, 1001
Psp6I CCWGG 3 cut(s) 244, 636, 781
PspGI CCWGG 3 cut(s) 244, 636, 781
PspPI GGNCC 5 cut(s) 242, 281, 338, 794, 816
PstI CTGCAG 2 cut(s) 973, 1027
PsuI RGATCY 2 cut(s) 293, 1269
RsaI GTAC 3 cut(s) 454, 774, 787
RsaNI GTAC 3 cut(s) 453, 773, 786
SaqAI TTAA 2 cut(s) 144, 429
SatI GCNGC 5 cut(s) 7, 241, 972, 1137, 1140
Sau3AI GATC 5 cut(s) 267, 293, 460, 1120, 1269
Sau96I GGNCC 5 cut(s) 242, 281, 338, 794, 816
ScaI AGTACT 1 cut(s) 454
SchI GAGTC 4 cut(s) 480, 1077, 1123, 1246
ScrFI CCNGG 3 cut(s) 246, 638, 783
SfaNI GCATC 4 cut(s) 177, 686, 983, 1142
SfcI CTRYAG 2 cut(s) 969, 1023
SgrAI CRCCGGYG 1 cut(s) 1165
SinI GGWCC 3 cut(s) 281, 338, 794
SsiI CCGC 3 cut(s) 48, 240, 1136
SspMI CTAG 4 cut(s) 98, 575, 1043, 1103
StyD4I CCNGG 3 cut(s) 244, 636, 781
StyI CCWWGG 1 cut(s) 334
TaaI ACNGT 2 cut(s) 67, 544
TaiI ACGT 1 cut(s) 610
TaqI TCGA 3 cut(s) 22, 171, 1150
TatI WGTACW 1 cut(s) 452
TauI GCSGC 2 cut(s) 243, 1139
TfiI GAWTC 3 cut(s) 249, 578, 1059
Tru1I TTAA 2 cut(s) 144, 429
Tru9I TTAA 2 cut(s) 144, 429
TscAI CASTG 4 cut(s) 193, 394, 1032, 1072
TseFI GTSAC 2 cut(s) 498, 1045
TseI GCWGC 3 cut(s) 6, 971, 1139
Tsp45I GTSAC 2 cut(s) 498, 1045
TspDTI ATGAA 5 cut(s) 18, 141, 820, 876, 1211
TspGWI ACGGA 1 cut(s) 1232
TspRI CASTG 4 cut(s) 193, 394, 1032, 1072
VpaK11BI GGWCC 3 cut(s) 281, 338, 794
XapI RAATTY 2 cut(s) 393, 1216
XcmI CCANNNNNNNNNTGG 1 cut(s) 1206
XmiI GTMKAC 1 cut(s) 422
XspI CTAG 4 cut(s) 98, 575, 1043, 1103
ZrmI AGTACT 1 cut(s) 454
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.