Rmu_sc0000371.1_g000040
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000371.1
Physical Location & Seq
Forward (+)
142805 .. 146075
3271 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000371.1_g000040.1.cds

Sequence Viewer

Length: 1134 bp
atgtcaggaagtgcctccccatcagttttggtcttatttttgtgcatctctggtctagcacaagctcaagtttctgctcctgctcctgctcctgctccgcaacctcaagctactaatgccaccactgacccatctcaagcaagagttttgaattcagtgtttgagaaatggaatattcgggccgatccgaagcaatggaacacaaccggagacccatgcagtggagctgccatagactccaccagtcactccaccaaatttgatgaccccgcttacaaccccttcatcatatgtgactgctcttatcaatccggcaccatttgccacattacccaactgaaagttcaggacttggaagttgttggtgtaattccagacgagttatggagtttgacttccctcaccaatctgaatttggaaaggaattccctgacaggacctctctctgcagccattgcaaatctaactggcttgcaatactttactattggcataaacgatttatcaggcgagataccaaaagaacttggacaacttactgaactgagatcattggcttttgggagaaacaacttttcaggttctctgccatctgagctagggaatttattcaaattacaacagctttacgttgatagttgtggagttagcggtgagattccaccaacatttgctgatctacaaaacttggagattttttcggctagaaacgttgaactctctggcaggataccagacttcatagggaattggtcaaagcttactaccttgaggtttcaaggaaactctttcgaaggtcctataccatttgcattttccaatctgacttctgtgaaagagctacgcattagtgatttgtcgaatgccaatgggagctcttctcttgcatttattgagaatatgaaggctctaactatcttacagctgaggaataacaatatttctgattcaattccttccgattttggagtataccaaagtttgttgcagctggatttgagcttcaacaatttaactggacagataccagactcactctttaatttgagttctctctccatcttgtttcttggaaacaataagttgaatggcacccttcctgagtataagacagcacctcttctcaatatgtaa

Protein Analysis

377

Amino Acids

40.69

Weight (kDa)

4.61

Isoelectric Point (pI)

42.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 314, 1091
AccB7I CCANNNNNTGG 1 cut(s) 221
AccI GTMKAC 1 cut(s) 972
AciI CCGC 3 cut(s) 98, 270, 651
AclI AACGTT 1 cut(s) 711
AclWI GGATC 1 cut(s) 179
AcsI RAATTY 5 cut(s) 151, 257, 412, 424, 604
AfiI CCNNNNNNNGG 1 cut(s) 221
AgsI TTSAA 7 cut(s) 151, 613, 716, 779, 951, 1006, 1087
AjuI GAANNNNNNNTTGG 2 cut(s) 327, 359
Alw21I GWGCWC 1 cut(s) 878
Alw26I GTCTC 1 cut(s) 204
AlwI GGATC 1 cut(s) 179
AoxI GGCC 1 cut(s) 180
ApeKI GCWGC 3 cut(s) 227, 449, 988
ApoI RAATTY 5 cut(s) 151, 257, 412, 424, 604
Asp700I GAANNNNTTC 1 cut(s) 608
AspS9I GGNCC 3 cut(s) 180, 437, 797
AsuHPI GGTGA 2 cut(s) 394, 665
AsuII TTCGAA 1 cut(s) 792
AvaII GGWCC 2 cut(s) 437, 797
BanI GGYRCC 2 cut(s) 314, 1091
BanII GRGCYC 1 cut(s) 878
BarI GAAGNNNNNNTAC 2 cut(s) 786, 818
Bbv12I GWGCWC 1 cut(s) 878
BbvCI CCTCAGC 1 cut(s) 926
BbvI GCAGC 3 cut(s) 214, 461, 1000
BccI CCATC 4 cut(s) 28, 139, 598, 1067
BciVI GTATCC 1 cut(s) 723
BcoDI GTCTC 1 cut(s) 204
BfaI CTAG 3 cut(s) 56, 599, 705
BfmI CTRYAG 1 cut(s) 447
BfuI GTATCC 1 cut(s) 723
BisI GCNGC 3 cut(s) 228, 450, 989
BlsI GCNGC 3 cut(s) 229, 451, 990
Bme18I GGWCC 2 cut(s) 437, 797
BmgT120I GGNCC 3 cut(s) 180, 437, 797
BmiI GGNNCC 2 cut(s) 316, 1093
BmsI GCATC 1 cut(s) 54
BplI GAGNNNNNCTC 2 cut(s) 865, 897
Bpu10I CCTNAGC 1 cut(s) 926
Bpu14I TTCGAA 1 cut(s) 792
BpuEI CTTGAG 4 cut(s) 51, 90, 120, 790
BsaI GGTCTC 1 cut(s) 204
BsaWI WCCGGW 1 cut(s) 206
Bsc4I CCNNNNNNNGG 1 cut(s) 221
Bse1I ACTGG 3 cut(s) 243, 472, 1021
Bse3DI GCAATG 2 cut(s) 200, 453
BseLI CCNNNNNNNGG 1 cut(s) 221
BseMI GCAATG 2 cut(s) 200, 453
BseMII CTCAG 4 cut(s) 536, 585, 917, 1092
BseNI ACTGG 3 cut(s) 243, 472, 1021
BseXI GCAGC 3 cut(s) 214, 461, 1000
BshFI GGCC 1 cut(s) 182
BshNI GGYRCC 2 cut(s) 314, 1091
BsiHKAI GWGCWC 1 cut(s) 878
BsiSI CCGG 2 cut(s) 207, 312
BslI CCNNNNNNNGG 1 cut(s) 221
BsmAI GTCTC 1 cut(s) 204
BsmI GAATGC 1 cut(s) 868
BsnI GGCC 1 cut(s) 182
Bso31I GGTCTC 1 cut(s) 204
Bsp119I TTCGAA 1 cut(s) 792
Bsp1286I GDGCHC 1 cut(s) 878
Bsp143I GATC 3 cut(s) 184, 548, 676
BspACI CCGC 3 cut(s) 98, 270, 651
BspANI GGCC 1 cut(s) 182
BspCNI CTCAG 4 cut(s) 537, 586, 918, 1093
BspLI GGNNCC 2 cut(s) 316, 1093
BspMAI CTGCAG 1 cut(s) 451
BspPI GGATC 1 cut(s) 179
BspQI GCTCTTC 1 cut(s) 883
BspT104I TTCGAA 1 cut(s) 792
BspT107I GGYRCC 2 cut(s) 314, 1091
BspTNI GGTCTC 1 cut(s) 204
BsrDI GCAATG 2 cut(s) 200, 453
BsrI ACTGG 3 cut(s) 243, 472, 1021
BssMI GATC 3 cut(s) 184, 548, 676
BssNAI GTATAC 1 cut(s) 973
Bst1107I GTATAC 1 cut(s) 973
Bst6I CTCTTC 2 cut(s) 883, 1125
BstAPI GCANNNNNTGC 2 cut(s) 321, 455
BstBI TTCGAA 1 cut(s) 792
BstC8I GCNNGC 1 cut(s) 473
BstDEI CTNAG 4 cut(s) 545, 594, 926, 1101
BstKTI GATC 3 cut(s) 187, 551, 679
BstMAI GTCTC 1 cut(s) 204
BstMBI GATC 3 cut(s) 184, 548, 676
BstMWI GCNNNNNNNGC 4 cut(s) 116, 321, 455, 595
BstSFI CTRYAG 1 cut(s) 447
BstV1I GCAGC 3 cut(s) 214, 461, 1000
BstZ17I GTATAC 1 cut(s) 973
BsuI GTATCC 1 cut(s) 723
BsuRI GGCC 1 cut(s) 182
BtsI GCAGTG 1 cut(s) 226
BtsIMutI CAGTG 3 cut(s) 123, 162, 226
Cac8I GCNNGC 1 cut(s) 473
Cfr13I GGNCC 3 cut(s) 180, 437, 797
CspCI CAANNNNNGTGG 2 cut(s) 241, 276
CviAII CATG 1 cut(s) 216
DdeI CTNAG 4 cut(s) 545, 594, 926, 1101
DpnI GATC 3 cut(s) 186, 550, 678
DpnII GATC 3 cut(s) 184, 548, 676
Eam1104I CTCTTC 2 cut(s) 883, 1125
EarI CTCTTC 2 cut(s) 883, 1125
Ecl136II GAGCTC 1 cut(s) 876
Eco24I GRGCYC 1 cut(s) 878
Eco31I GGTCTC 1 cut(s) 204
Eco47I GGWCC 2 cut(s) 437, 797
Eco53kI GAGCTC 1 cut(s) 876
EcoICRI GAGCTC 1 cut(s) 876
EcoO109I RGGNCCY 2 cut(s) 437, 797
EcoRI GAATTC 2 cut(s) 151, 424
EcoT38I GRGCYC 1 cut(s) 878
FaeI CATG 1 cut(s) 219
FatI CATG 1 cut(s) 215
FauI CCCGC 1 cut(s) 277
FauNDI CATATG 1 cut(s) 290
FblI GTMKAC 1 cut(s) 972
Fnu4HI GCNGC 3 cut(s) 228, 450, 989
FriOI GRGCYC 1 cut(s) 878
Fsp4HI GCNGC 3 cut(s) 228, 450, 989
FspBI CTAG 3 cut(s) 56, 599, 705
GluI GCNGC 3 cut(s) 228, 450, 989
HaeIII GGCC 1 cut(s) 182
HapII CCGG 2 cut(s) 207, 312
Hin1II CATG 1 cut(s) 219
HindIII AAGCTT 1 cut(s) 758
HinfI GANTC 4 cut(s) 236, 658, 947, 1031
HpaII CCGG 2 cut(s) 207, 312
HphI GGTGA 2 cut(s) 394, 665
Hpy166II GTNNAC 1 cut(s) 973
Hpy188I TCNGA 6 cut(s) 189, 411, 595, 825, 946, 961
Hpy188III TCNNGA 4 cut(s) 6, 347, 374, 1100
Hpy8I GTNNAC 1 cut(s) 973
HpyAV CCTTC 5 cut(s) 292, 788, 898, 966, 1106
HpyCH4IV ACGT 2 cut(s) 630, 711
HpyCH4V TGCA 8 cut(s) 45, 219, 449, 458, 475, 812, 887, 988
HpyF10VI GCNNNNNNNGC 4 cut(s) 116, 321, 455, 595
HpyF3I CTNAG 4 cut(s) 545, 594, 926, 1101
HpySE526I ACGT 2 cut(s) 630, 711
Hsp92II CATG 1 cut(s) 219
Kzo9I GATC 3 cut(s) 184, 548, 676
LguI GCTCTTC 1 cut(s) 883
LmnI GCTCC 6 cut(s) 82, 88, 94, 100, 224, 873
Lsp1109I GCAGC 3 cut(s) 214, 461, 1000
LweI GCATC 1 cut(s) 54
MaeI CTAG 3 cut(s) 56, 599, 705
MaeII ACGT 2 cut(s) 630, 711
MaeIII GTNAC 2 cut(s) 245, 293
MalI GATC 3 cut(s) 186, 550, 678
MboI GATC 3 cut(s) 184, 548, 676
MboII GAAGA 2 cut(s) 870, 1112
MhlI GDGCHC 1 cut(s) 878
MlyI GAGTC 2 cut(s) 230, 1025
MnlI CCTC 7 cut(s) 25, 114, 410, 450, 765, 921, 1128
MroXI GAANNNNTTC 1 cut(s) 608
MseI TTAA 2 cut(s) 1013, 1041
MspA1I CMGCKG 2 cut(s) 925, 991
MspI CCGG 2 cut(s) 207, 312
Mva1269I GAATGC 1 cut(s) 868
MwoI GCNNNNNNNGC 4 cut(s) 116, 321, 455, 595
NdeI CATATG 1 cut(s) 290
NdeII GATC 3 cut(s) 184, 548, 676
NlaIII CATG 1 cut(s) 219
NlaIV GGNNCC 2 cut(s) 316, 1093
NmuCI GTSAC 2 cut(s) 245, 293
NspV TTCGAA 1 cut(s) 792
PciSI GCTCTTC 1 cut(s) 883
PctI GAATGC 1 cut(s) 868
PdmI GAANNNNTTC 1 cut(s) 608
PfeI GAWTC 2 cut(s) 658, 947
PflMI CCANNNNNTGG 1 cut(s) 221
PkrI GCNGC 3 cut(s) 229, 451, 990
PleI GAGTC 2 cut(s) 230, 1025
PpsI GAGTC 2 cut(s) 230, 1025
PpuMI RGGWCCY 2 cut(s) 437, 797
Psp124BI GAGCTC 1 cut(s) 878
Psp1406I AACGTT 1 cut(s) 711
Psp5II RGGWCCY 2 cut(s) 437, 797
PspN4I GGNNCC 2 cut(s) 316, 1093
PspPI GGNCC 3 cut(s) 180, 437, 797
PspPPI RGGWCCY 2 cut(s) 437, 797
PstI CTGCAG 1 cut(s) 451
PvuII CAGCTG 2 cut(s) 925, 991
SacI GAGCTC 1 cut(s) 878
SapI GCTCTTC 1 cut(s) 883
SaqAI TTAA 2 cut(s) 1013, 1041
SatI GCNGC 3 cut(s) 228, 450, 989
Sau3AI GATC 3 cut(s) 184, 548, 676
Sau96I GGNCC 3 cut(s) 180, 437, 797
SchI GAGTC 2 cut(s) 230, 1025
SduI GDGCHC 1 cut(s) 878
SfaNI GCATC 1 cut(s) 54
SfcI CTRYAG 1 cut(s) 447
SfuI TTCGAA 1 cut(s) 792
SinI GGWCC 2 cut(s) 437, 797
SmlI CTYRAG 4 cut(s) 66, 105, 135, 769
SmoI CTYRAG 4 cut(s) 66, 105, 135, 769
SsiI CCGC 3 cut(s) 98, 270, 651
SspI AATATT 2 cut(s) 175, 940
SspMI CTAG 3 cut(s) 56, 599, 705
SstI GAGCTC 1 cut(s) 878
TaiI ACGT 2 cut(s) 633, 714
TaqI TCGA 2 cut(s) 792, 860
TfiI GAWTC 2 cut(s) 658, 947
Tru1I TTAA 2 cut(s) 1013, 1041
Tru9I TTAA 2 cut(s) 1013, 1041
TscAI CASTG 3 cut(s) 130, 162, 226
TseFI GTSAC 2 cut(s) 245, 293
TseI GCWGC 3 cut(s) 227, 449, 988
Tsp45I GTSAC 2 cut(s) 245, 293
TspDTI ATGAA 3 cut(s) 274, 730, 917
TspRI CASTG 3 cut(s) 130, 162, 226
Van91I CCANNNNNTGG 1 cut(s) 221
VpaK11BI GGWCC 2 cut(s) 437, 797
XapI RAATTY 5 cut(s) 151, 257, 412, 424, 604
XcmI CCANNNNNNNNNTGG 2 cut(s) 381, 412
XmiI GTMKAC 1 cut(s) 972
XmnI GAANNNNTTC 1 cut(s) 608
XspI CTAG 3 cut(s) 56, 599, 705
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.