Rw2G019380
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
25453830 .. 25462539
8710 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G019380.1

Sequence Viewer

Length: 3177 bp
ATGCAGTGTGTGTTAGAGCTTTTAAGTCAAAACTATTCGTTGGATTTCCACGACTCCGTTGGAGATTTTCCTCTGGCTTTGTCATCCTTGGTCCCTGGTCGCGGGCGTCCATCAACTGCTTCCCCATCAGTTTTGGTCTTATTTTTGTGCATCTCTGGTGTAGCACAAGCTCAAGTTTCTGGTCCTGCTCCTGCTCCGCAACCTCAAGCTACTAATGCCACCACTGACCCATCTCAAGCAAGAGTTTTGAATTCAGTGTTTGAGAAATGGAATATTCGGGCCGATCCGAAGCAATGGAACACAACTGGAGACCCATGCAGTGGAGCTGCCATAGACTCCACCAGTCACTCCACCAAATTTGATGACCCCGCTTACAACCCCTTCATCATATGTGACTGCTCTTATCAATCCGGCACCATTTGCCACATTACACAACTGAAAGTTCAGGACCTGGAAGTTGTTGGTGTAATTCCAGACGAGTTATGGAGTTTGACTTCCCTCACCAATCTGAATTTGGAAAGGAATTGCTTGACAGGACCTCTCTCTGCAGCCATTGCAAATCTAACTGGCTTGCAATATTTTACTATTGGCATCAACGATTTATCAGGCGAGATACCAAAAGAAATTGGACAACTTACAGAACTGAGATCATTGTCTTTTGGGAGAAACAACTTTTCGGGTTCTCTGCCATCTGAGCTAGGGAATTTATTCAAATTACAACAGCTGTACGTATCAAATTGTGGAGTTAGCGGTGAGATTCCACCAACTTTTGCTAATCTACAAAACTTGGAGATTTTTTGGGCTAGAGATGTTGAACTCTCTGGCAGGATACCAGACTTCATAGGGAATTTCTCAAAGCTTACTTCCTTGAGGTTTCAAGGAAACTCTTTCGAAGGTCCTATACCATTTGCATTTTCCAATCTGACATCTATTAAAGAGCTACACATTAGTGATTTGTCGAATGCCAATGGGAGCTCTTCTCTTGCGTTTATTGAGAATATGAAGGCTCTAAGTATCTTGGTGCTGAGGAATAACAATATTTCTGATTCAATTCCTTCTGATTTTGGATTATACCAAAGTTTGTCTCAGCTGGATTTGAGCTTCAACAATTTAACTGGACAGATACCAGACTCACTCTTTAATTTGAGTTCTCTCTCCATCTTGTTTCTTGGAAACAATAAGTTGAATGGCACCCTTCCCGAGTATAAGACTGCATCTCTTCTCAATATAGATTTGTCGTACAATTATCTAGATGGGAGCATTCCTTCTTGGGTCAAAGAAGAAAAATTACAGCTTAATTTAGTTGCCAACAACTTCAGCATAGAAAGTTTACAGAGCAGTGGTCTTCCTTCAGGGTTGGCTTGCCTTCAAAGAAACTTTCCTTGCAATCGTGGCCCTGGAATCTATTATAATTTTGGGATTAATTGTGGAGGACCTGAGATTACGTCTTCCTCCGATGGGATTGTGTATGAGAAGGAAAATGAACCCCTTGGACCAGCTTCATATTTTGTGACAGGCACAAGCAGATGGGGAGTTAGCAATGTCGGATATTTCGCTGGCAGTACCAATCCTCAGCTTTCTGCTTCATCAATTAGATACTTTGGCTTGGGGCTTCAGAATGGTAACTACACCGTGAACCTCAAGTTTGCAGAACATGTCATTCTGGCTGCTACTACCGGGAAATTTATTGGGAAACGTCTTTTTGATATTTATATCCAGGGCATTCTGGTATCAAAGAATTTTGATATACTAAAGGAGGCAGGTATGTCATCTTTCGGAGCTGTTCAGAAGCCATACACGGCTCATGTTTCGGAGAACTACCTTGAAATCCATCTCTTTTGGGCTGGAAAGGGGACTTGCTGTATACCTGAGCGGGGTACTTACGGACCTGCTATTGCAGCCATCAGTGCTACACCGGATTTCATACCTACTGTCAGTAACAGCCTTCCAACTAGTAAGAAGAATAGAACTGGGCTGATTGTTGGGATTGTTGTGGGTGGTGGAGTAATTTTGGTTCTGTTGTTTGTGGCTTTTTATCTTATTCAAAGAAGAAAAAGGTCTGACCCTGATGATGACGAAGAGCTGTATGGGATAGATGTTGGACCACTTACTTTCAGTTATCCTGAACTAAAGACAGCTACAAACGACTTTGATGAAGCTCATAAGCTTGGAGAGGGAGGATTTGGACCTGTCTATAGAGGAACACTTAGTGATGGAAGAGTAATTGCTGTGAAGCAATTGTCTGCTGCATCCCACCAAGGAAAGAACCAGTTTGTAACTGAGATTGCCACTATATCTGCTGTGCAACACAATAACCTCGTAAAGTTGTACGGATTCTGCACTGAGGGAGTTAAACGGCTCCTTGTCTATGAGTATCTGGAGAACAACAATCTTGATCAAGCATTATTTGGAGAGAGACGTTTAAATCTTGATTGGTCAACACGTTTTAATATATGCTTGGGCATAGCTAGAGGTTTAACTTATCTTCATGAAGAATCAAGAGTTCGAATTGTACACAGAGATGTGAAGGCCAGTAATATTCTGCTTGACACTAATCTCACCCCCAAGATATCGGATTTTGGTTTGGCTAAGCTTTTTGATGAGAAAAAGACCCACATAAGTACCCGTGTTGCGGGAACAATTGGGTATCTTGCACCGGAATATGCCATGCGTGGACACCTTACAGAGAAGACTGATGTCTTTGCCTTTGGTGTTGTGGCTCTTGAATTGTCAGTGGTAGGCCAAATTCTGATCCGAGTTTGGGCTTGGCAATTGCATGAAAACAGACGGGCAGTTGAACTAGTGGACTCTAGATTATCTGAATTCAATGAGGAAGAAGCACACCGAATAATCAAAATAGGACTTTTGTGCACTCAAACATCACCAATGCTACGACCATCCATGTCCCGTGTAGTGGGAATGCTTTCAGGAGATATGGAAGTGACAACAGTAACTTCAAAGCCCGGTTACTTGACTGACTGGAAATTTGATGATTTAACTACAGTCACCAGCCTAACAAAACTGGACGGTGTAAGTATTGTCACCAACGTGACTGATATGACGACTAGAGGAACTGATTTTAGCTTCAACAACCCATTAGCAAGTACAAGCATAATGGGGCAATCACCTCCTAATGCCATTCATTCTATGTCCAAAAATAATGTTGATGGTCGGTGA

Protein Analysis

1058

Amino Acids

115.56

Weight (kDa)

5.53

Isoelectric Point (pI)

34.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 209 - 316 1.3e-08 Leucine-rich repeat region
Malectin PF11721 472 - 635 3.7e-31 Malectin domain
Pkinase PF00069 718 - 969 2.3e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 721 - 973 8.9e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1410
Acc36I ACCTGC 2 cut(s) 1751, 1897
AccB1I GGYRCC 2 cut(s) 413, 1190
AccB7I CCANNNNNTGG 1 cut(s) 320
AccBSI CCGCTC 1 cut(s) 1873
AccI GTMKAC 1 cut(s) 1864
AccII CGCG 1 cut(s) 102
AciI CCGC 6 cut(s) 102, 197, 369, 750, 1873, 2633
AclWI GGATC 2 cut(s) 278, 2746
AcuI CTGAAG 3 cut(s) 1300, 1335, 1598
AcyI GRCGYC 1 cut(s) 106
AdeI CACNNNGTG 1 cut(s) 2210
AfaI GTAC 8 cut(s) 728, 1241, 1564, 1879, 2330, 2514, 2623, 3106
AfiI CCNNNNNNNGG 7 cut(s) 101, 320, 1458, 1874, 2632, 2761, 2914
AflIII ACRYGT 2 cut(s) 1654, 2441
AhlI ACTAGT 2 cut(s) 1952, 2800
AjnI CCWGG 4 cut(s) 94, 450, 1396, 1716
AleI CACNNNNGTG 2 cut(s) 948, 3047
Alw21I GWGCWC 2 cut(s) 977, 2873
Alw26I GTCTC 3 cut(s) 303, 1089, 2410
Alw44I GTGCAC 1 cut(s) 2869
AlwI GGATC 2 cut(s) 278, 2746
AlwNI CAGNNNCTG 1 cut(s) 451
Ama87I CYCGRG 1 cut(s) 1199
AoxI GGCC 4 cut(s) 279, 1393, 2529, 2740
ApaLI GTGCAC 1 cut(s) 2869
ApeKI GCWGC 5 cut(s) 326, 548, 1667, 1898, 2246
ArsI GACNNNNNNTTYG 2 cut(s) 2969, 3001
AseI ATTAAT 1 cut(s) 1422
Asp700I GAANNNNTTC 2 cut(s) 707, 2923
AsuC2I CCSGG 2 cut(s) 1678, 2964
AsuHPI GGTGA 7 cut(s) 493, 764, 2551, 2874, 2998, 3034, 3117
AsuII TTCGAA 2 cut(s) 891, 2506
AvaI CYCGRG 1 cut(s) 1199
BaeGI GKGCMC 1 cut(s) 2873
BaeI ACNNNNGTAYC 2 cut(s) 2605, 2638
BanI GGYRCC 2 cut(s) 413, 1190
BanII GRGCYC 1 cut(s) 977
BarI GAAGNNNNNNTAC 4 cut(s) 885, 917, 1272, 1304
BbsI GAAGAC 3 cut(s) 1337, 1440, 2696
Bbv12I GWGCWC 2 cut(s) 977, 2873
BbvCI CCTCAGC 2 cut(s) 1025, 1572
BbvI GCAGC 5 cut(s) 313, 560, 1654, 1910, 2233
BceAI ACGGC 2 cut(s) 1815, 2372
BciT130I CCWGG 4 cut(s) 96, 452, 1398, 1718
BciVI GTATCC 1 cut(s) 822
BclI TGATCA 1 cut(s) 2395
BcnI CCSGG 2 cut(s) 1678, 2964
BcoDI GTCTC 3 cut(s) 303, 1089, 2410
BcuI ACTAGT 2 cut(s) 1952, 2800
BfaI CTAG 8 cut(s) 698, 804, 1250, 1953, 2469, 2801, 2811, 3066
BfmI CTRYAG 3 cut(s) 546, 2194, 3000
BfuAI ACCTGC 2 cut(s) 1751, 1897
BfuI GTATCC 1 cut(s) 822
BisI GCNGC 5 cut(s) 327, 549, 1668, 1899, 2247
BlpI GCTNAGC 1 cut(s) 2589
BlsI GCNGC 5 cut(s) 328, 550, 1669, 1900, 2248
Bme1390I CCNGG 6 cut(s) 96, 452, 1398, 1678, 1718, 2964
BmeT110I CYCGRG 1 cut(s) 1199
BmiI GGNNCC 4 cut(s) 93, 415, 1192, 2360
BmrFI CCNGG 6 cut(s) 96, 452, 1398, 1678, 1718, 2964
BmrI ACTGGG 1 cut(s) 1980
BmsI GCATC 4 cut(s) 159, 600, 1223, 2258
BmuI ACTGGG 1 cut(s) 1980
BoxI GACNNNNGTC 1 cut(s) 2696
BpiI GAAGAC 3 cut(s) 1337, 1440, 2696
BplI GAGNNNNNCTC 2 cut(s) 964, 996
BpmI CTGGAG 2 cut(s) 327, 2399
Bpu10I CCTNAGC 3 cut(s) 1025, 1572, 1869
Bpu1102I GCTNAGC 1 cut(s) 2589
Bpu14I TTCGAA 2 cut(s) 891, 2506
BpuEI CTTGAG 5 cut(s) 156, 189, 219, 889, 1625
BpuMI CCSGG 2 cut(s) 1678, 2964
BsaAI YACGTR 1 cut(s) 730
BsaHI GRCGYC 1 cut(s) 106
BsaI GGTCTC 1 cut(s) 303
BsaJI CCNNGG 6 cut(s) 87, 94, 1396, 1489, 1717, 2257
BsaWI WCCGGW 2 cut(s) 1915, 2656
Bsc4I CCNNNNNNNGG 7 cut(s) 101, 320, 1458, 1874, 2632, 2761, 2914
Bse1I ACTGG 9 cut(s) 310, 342, 571, 1120, 1975, 2269, 2532, 2984, 3027
Bse3DI GCAATG 3 cut(s) 299, 552, 1546
BseBI CCWGG 4 cut(s) 96, 452, 1398, 1718
BseDI CCNNGG 6 cut(s) 87, 94, 1396, 1489, 1717, 2257
BseGI GGATG 3 cut(s) 83, 2249, 2897
BseLI CCNNNNNNNGG 7 cut(s) 101, 320, 1458, 1874, 2632, 2761, 2914
BseMI GCAATG 3 cut(s) 299, 552, 1546
BseMII CTCAG 9 cut(s) 635, 684, 1016, 1100, 1428, 1586, 1860, 2271, 2334
BseNI ACTGG 9 cut(s) 310, 342, 571, 1120, 1975, 2269, 2532, 2984, 3027
BseSI GKGCMC 1 cut(s) 2873
BseXI GCAGC 5 cut(s) 313, 560, 1654, 1910, 2233
BsgI GTGCAG 1 cut(s) 2323
Bsh1236I CGCG 1 cut(s) 102
BshFI GGCC 4 cut(s) 281, 1395, 2531, 2742
BshNI GGYRCC 2 cut(s) 413, 1190
BsiHKAI GWGCWC 2 cut(s) 977, 2873
BsiHKCI CYCGRG 1 cut(s) 1199
BsiSI CCGG 5 cut(s) 411, 1677, 1916, 2657, 2964
BslFI GGGAC 3 cut(s) 77, 1867, 2890
BslI CCNNNNNNNGG 7 cut(s) 101, 320, 1458, 1874, 2632, 2761, 2914
BsmAI GTCTC 3 cut(s) 303, 1089, 2410
BsmBI CGTCTC 1 cut(s) 2410
BsmFI GGGAC 3 cut(s) 77, 1867, 2890
BsmI GAATGC 4 cut(s) 967, 1260, 1722, 2925
BsnI GGCC 4 cut(s) 281, 1395, 2531, 2742
Bso31I GGTCTC 1 cut(s) 303
BsoBI CYCGRG 1 cut(s) 1199
Bsp119I TTCGAA 2 cut(s) 891, 2506
Bsp1286I GDGCHC 2 cut(s) 977, 2873
Bsp1407I TGTACA 1 cut(s) 2512
Bsp143I GATC 4 cut(s) 283, 647, 2395, 2751
Bsp1720I GCTNAGC 1 cut(s) 2589
BspACI CCGC 6 cut(s) 102, 197, 369, 750, 1873, 2633
BspANI GGCC 4 cut(s) 281, 1395, 2531, 2742
BspCNI CTCAG 9 cut(s) 636, 685, 1017, 1099, 1429, 1585, 1861, 2272, 2335
BspFNI CGCG 1 cut(s) 102
BspHI TCATGA 1 cut(s) 2488
BspLI GGNNCC 4 cut(s) 93, 415, 1192, 2360
BspMAI CTGCAG 1 cut(s) 550
BspMI ACCTGC 2 cut(s) 1751, 1897
BspPI GGATC 2 cut(s) 278, 2746
BspQI GCTCTTC 2 cut(s) 982, 2073
BspT104I TTCGAA 2 cut(s) 891, 2506
BspT107I GGYRCC 2 cut(s) 413, 1190
BspTNI GGTCTC 1 cut(s) 303
BsrBI CCGCTC 1 cut(s) 1873
BsrDI GCAATG 3 cut(s) 299, 552, 1546
BsrGI TGTACA 1 cut(s) 2512
BsrI ACTGG 9 cut(s) 310, 342, 571, 1120, 1975, 2269, 2532, 2984, 3027
BssECI CCNNGG 6 cut(s) 87, 94, 1396, 1489, 1717, 2257
BssMI GATC 4 cut(s) 283, 647, 2395, 2751
BssNAI GTATAC 1 cut(s) 1865
BssNI GRCGYC 1 cut(s) 106
BssT1I CCWWGG 3 cut(s) 87, 1489, 2257
Bst1107I GTATAC 1 cut(s) 1865
Bst2UI CCWGG 4 cut(s) 96, 452, 1398, 1718
Bst4CI ACNGT 5 cut(s) 1633, 1933, 2950, 3004, 3029
Bst6I CTCTTC 4 cut(s) 982, 1224, 2073, 2212
BstACI GRCGYC 1 cut(s) 106
BstAPI GCANNNNNTGC 2 cut(s) 420, 554
BstAUI TGTACA 1 cut(s) 2512
BstBAI YACGTR 1 cut(s) 730
BstBI TTCGAA 2 cut(s) 891, 2506
BstC8I GCNNGC 4 cut(s) 104, 572, 1363, 1558
BstF5I GGATG 3 cut(s) 83, 2249, 2897
BstFNI CGCG 1 cut(s) 102
BstKTI GATC 4 cut(s) 286, 650, 2398, 2754
BstMAI GTCTC 3 cut(s) 303, 1089, 2410
BstMBI GATC 4 cut(s) 283, 647, 2395, 2751
BstMWI GCNNNNNNNGC 7 cut(s) 215, 420, 554, 694, 1392, 1898, 1907
BstNI CCWGG 4 cut(s) 96, 452, 1398, 1718
BstNSI RCATGY 1 cut(s) 1658
BstPAI GACNNNNGTC 1 cut(s) 2696
BstSCI CCNGG 6 cut(s) 94, 450, 1396, 1676, 1716, 2962
BstSFI CTRYAG 3 cut(s) 546, 2194, 3000
BstSLI GKGCMC 1 cut(s) 2873
BstSNI TACGTA 1 cut(s) 730
BstUI CGCG 1 cut(s) 102
BstV1I GCAGC 5 cut(s) 313, 560, 1654, 1910, 2233
BstV2I GAAGAC 3 cut(s) 1337, 1440, 2696
BstZ17I GTATAC 1 cut(s) 1865
BsuI GTATCC 1 cut(s) 822
BsuRI GGCC 4 cut(s) 281, 1395, 2531, 2742
BtsCI GGATG 3 cut(s) 83, 2249, 2897
BtsI GCAGTG 3 cut(s) 11, 325, 1345
BtsIMutI CAGTG 8 cut(s) 11, 222, 261, 325, 1345, 1912, 2340, 2739
BveI ACCTGC 2 cut(s) 1751, 1897
Cac8I GCNNGC 4 cut(s) 104, 572, 1363, 1558
CaiI CAGNNNCTG 1 cut(s) 451
CciI TCATGA 1 cut(s) 2488
CseI GACGC 1 cut(s) 95
Csp6I GTAC 8 cut(s) 727, 1240, 1563, 1878, 2329, 2513, 2622, 3105
CspCI CAANNNNNGTGG 2 cut(s) 340, 375
CviAII CATG 7 cut(s) 315, 1655, 1805, 2489, 2668, 2777, 2902
CviQI GTAC 8 cut(s) 727, 1240, 1563, 1878, 2329, 2513, 2622, 3105
DpnI GATC 4 cut(s) 285, 649, 2397, 2753
DpnII GATC 4 cut(s) 283, 647, 2395, 2751
DraI TTTAAA 1 cut(s) 2424
DraIII CACNNNGTG 1 cut(s) 2210
Eam1104I CTCTTC 4 cut(s) 982, 1224, 2073, 2212
EarI CTCTTC 4 cut(s) 982, 1224, 2073, 2212
Ecl136II GAGCTC 1 cut(s) 975
Eco105I TACGTA 1 cut(s) 730
Eco130I CCWWGG 3 cut(s) 87, 1489, 2257
Eco24I GRGCYC 1 cut(s) 977
Eco31I GGTCTC 1 cut(s) 303
Eco32I GATATC 1 cut(s) 2571
Eco53kI GAGCTC 1 cut(s) 975
Eco57I CTGAAG 3 cut(s) 1300, 1335, 1598
Eco88I CYCGRG 1 cut(s) 1199
EcoICRI GAGCTC 1 cut(s) 975
EcoO109I RGGNCCY 4 cut(s) 448, 536, 896, 1433
EcoRI GAATTC 2 cut(s) 250, 2822
EcoRII CCWGG 4 cut(s) 94, 450, 1396, 1716
EcoRV GATATC 1 cut(s) 2571
EcoT14I CCWWGG 3 cut(s) 87, 1489, 2257
EcoT38I GRGCYC 1 cut(s) 977
ErhI CCWWGG 3 cut(s) 87, 1489, 2257
Esp3I CGTCTC 1 cut(s) 2410
FaeI CATG 7 cut(s) 318, 1658, 1808, 2492, 2671, 2780, 2905
FaqI GGGAC 3 cut(s) 77, 1867, 2890
FatI CATG 7 cut(s) 314, 1654, 1804, 2488, 2667, 2776, 2901
FauI CCCGC 4 cut(s) 95, 376, 1866, 2626
FauNDI CATATG 1 cut(s) 389
FbaI TGATCA 1 cut(s) 2395
FblI GTMKAC 1 cut(s) 1864
Fnu4HI GCNGC 5 cut(s) 327, 549, 1668, 1899, 2247
FokI GGATG 3 cut(s) 70, 2236, 2884
FriOI GRGCYC 1 cut(s) 977
Fsp4HI GCNGC 5 cut(s) 327, 549, 1668, 1899, 2247
FspBI CTAG 8 cut(s) 698, 804, 1250, 1953, 2469, 2801, 2811, 3066
GluI GCNGC 5 cut(s) 327, 549, 1668, 1899, 2247
GsuI CTGGAG 2 cut(s) 327, 2399
HaeIII GGCC 4 cut(s) 281, 1395, 2531, 2742
HapII CCGG 5 cut(s) 411, 1677, 1916, 2657, 2964
HgaI GACGC 1 cut(s) 95
Hin1I GRCGYC 1 cut(s) 106
Hin1II CATG 7 cut(s) 318, 1658, 1808, 2492, 2671, 2780, 2905
HincII GTYRAC 1 cut(s) 2439
HindII GTYRAC 1 cut(s) 2439
HindIII AAGCTT 3 cut(s) 857, 2165, 2591
HinfI GANTC 9 cut(s) 53, 335, 757, 1046, 1130, 1401, 2334, 2495, 2807
HpaII CCGG 5 cut(s) 411, 1677, 1916, 2657, 2964
HphI GGTGA 7 cut(s) 493, 764, 2551, 2874, 2998, 3034, 3117
Hpy166II GTNNAC 8 cut(s) 1331, 1636, 1865, 2439, 2515, 2675, 2806, 2871
Hpy8I GTNNAC 8 cut(s) 1331, 1636, 1865, 2439, 2515, 2675, 2806, 2871
HpyCH4III ACNGT 5 cut(s) 1633, 1933, 2950, 3004, 3029
HpyCH4IV ACGT 6 cut(s) 729, 1445, 1696, 2419, 2443, 3048
HpyF10VI GCNNNNNNNGC 7 cut(s) 215, 420, 554, 694, 1392, 1898, 1907
HpySE526I ACGT 6 cut(s) 729, 1445, 1696, 2419, 2443, 3048
Hsp92I GRCGYC 1 cut(s) 106
Hsp92II CATG 7 cut(s) 318, 1658, 1808, 2492, 2671, 2780, 2905
Ksp22I TGATCA 1 cut(s) 2395
Kzo9I GATC 4 cut(s) 283, 647, 2395, 2751
LguI GCTCTTC 2 cut(s) 982, 2073
LmnI GCTCC 7 cut(s) 193, 199, 323, 972, 1257, 1778, 2364
Lsp1109I GCAGC 5 cut(s) 313, 560, 1654, 1910, 2233
LweI GCATC 4 cut(s) 159, 600, 1223, 2258
MaeI CTAG 8 cut(s) 698, 804, 1250, 1953, 2469, 2801, 2811, 3066
MaeII ACGT 6 cut(s) 729, 1445, 1696, 2419, 2443, 3048
MalI GATC 4 cut(s) 285, 649, 2397, 2753
MbiI CCGCTC 1 cut(s) 1873
MboI GATC 4 cut(s) 283, 647, 2395, 2751
MfeI CAATTG 3 cut(s) 2237, 2640, 2771
MhlI GDGCHC 2 cut(s) 977, 2873
MlyI GAGTC 4 cut(s) 47, 329, 1124, 2801
MmeI TCCRAC 5 cut(s) 21, 40, 1525, 1973, 2080
MroXI GAANNNNTTC 2 cut(s) 707, 2923
MslI CAYNNNNRTG 3 cut(s) 948, 2520, 3047
MspA1I CMGCKG 2 cut(s) 724, 1090
MspI CCGG 5 cut(s) 411, 1677, 1916, 2657, 2964
MspR9I CCNGG 6 cut(s) 96, 452, 1398, 1678, 1718, 2964
MunI CAATTG 3 cut(s) 2237, 2640, 2771
Mva1269I GAATGC 4 cut(s) 967, 1260, 1722, 2925
MvaI CCWGG 4 cut(s) 96, 452, 1398, 1718
MvnI CGCG 1 cut(s) 102
MwoI GCNNNNNNNGC 7 cut(s) 215, 420, 554, 694, 1392, 1898, 1907
NciI CCSGG 2 cut(s) 1678, 2964
NdeI CATATG 1 cut(s) 389
NdeII GATC 4 cut(s) 283, 647, 2395, 2751
NlaIII CATG 7 cut(s) 318, 1658, 1808, 2492, 2671, 2780, 2905
NlaIV GGNNCC 4 cut(s) 93, 415, 1192, 2360
NmuCI GTSAC 7 cut(s) 344, 392, 1510, 2941, 3004, 3040, 3049
NspI RCATGY 1 cut(s) 1658
NspV TTCGAA 2 cut(s) 891, 2506
OliI CACNNNNGTG 2 cut(s) 948, 3047
PagI TCATGA 1 cut(s) 2488
PciI ACATGT 1 cut(s) 1654
PciSI GCTCTTC 2 cut(s) 982, 2073
PctI GAATGC 4 cut(s) 967, 1260, 1722, 2925
PdmI GAANNNNTTC 2 cut(s) 707, 2923
PfeI GAWTC 5 cut(s) 757, 1046, 1401, 2334, 2495
PflMI CCANNNNNTGG 1 cut(s) 320
PkrI GCNGC 5 cut(s) 328, 550, 1669, 1900, 2248
PleI GAGTC 4 cut(s) 47, 329, 1124, 2801
PpsI GAGTC 4 cut(s) 47, 329, 1124, 2801
Ppu21I YACGTR 1 cut(s) 730
PpuMI RGGWCCY 4 cut(s) 448, 536, 896, 1433
PscI ACATGT 1 cut(s) 1654
PshAI GACNNNNGTC 1 cut(s) 2696
PshBI ATTAAT 1 cut(s) 1422
PsiI TTATAA 1 cut(s) 1410
Psp124BI GAGCTC 1 cut(s) 977
Psp5II RGGWCCY 4 cut(s) 448, 536, 896, 1433
Psp6I CCWGG 4 cut(s) 94, 450, 1396, 1716
PspGI CCWGG 4 cut(s) 94, 450, 1396, 1716
PspN4I GGNNCC 4 cut(s) 93, 415, 1192, 2360
PspPPI RGGWCCY 4 cut(s) 448, 536, 896, 1433
PsrI GAACNNNNNNTAC 2 cut(s) 1998, 2030
PstI CTGCAG 1 cut(s) 550
PstNI CAGNNNCTG 1 cut(s) 451
PvuII CAGCTG 2 cut(s) 724, 1090
RsaI GTAC 8 cut(s) 728, 1241, 1564, 1879, 2330, 2514, 2623, 3106
RsaNI GTAC 8 cut(s) 727, 1240, 1563, 1878, 2329, 2513, 2622, 3105
RseI CAYNNNNRTG 3 cut(s) 948, 2520, 3047
SacI GAGCTC 1 cut(s) 977
SapI GCTCTTC 2 cut(s) 982, 2073
SatI GCNGC 5 cut(s) 327, 549, 1668, 1899, 2247
Sau3AI GATC 4 cut(s) 283, 647, 2395, 2751
SchI GAGTC 4 cut(s) 47, 329, 1124, 2801
ScrFI CCNGG 6 cut(s) 96, 452, 1398, 1678, 1718, 2964
SduI GDGCHC 2 cut(s) 977, 2873
SfaNI GCATC 4 cut(s) 159, 600, 1223, 2258
SfcI CTRYAG 3 cut(s) 546, 2194, 3000
SfuI TTCGAA 2 cut(s) 891, 2506
SmiMI CAYNNNNRTG 3 cut(s) 948, 2520, 3047
SmlI CTYRAG 5 cut(s) 171, 204, 234, 868, 1640
SmoI CTYRAG 5 cut(s) 171, 204, 234, 868, 1640
SnaBI TACGTA 1 cut(s) 730
SpeI ACTAGT 2 cut(s) 1952, 2800
SsiI CCGC 6 cut(s) 102, 197, 369, 750, 1873, 2633
SspI AATATT 4 cut(s) 274, 578, 1039, 2539
SspMI CTAG 8 cut(s) 698, 804, 1250, 1953, 2469, 2801, 2811, 3066
SstI GAGCTC 1 cut(s) 977
StyD4I CCNGG 6 cut(s) 94, 450, 1396, 1676, 1716, 2962
StyI CCWWGG 3 cut(s) 87, 1489, 2257
TaaI ACNGT 5 cut(s) 1633, 1933, 2950, 3004, 3029
TaiI ACGT 6 cut(s) 732, 1448, 1699, 2422, 2446, 3051
TaqI TCGA 3 cut(s) 891, 959, 2506
TatI WGTACW 2 cut(s) 2512, 3104
TfiI GAWTC 5 cut(s) 757, 1046, 1401, 2334, 2495
TscAI CASTG 7 cut(s) 229, 261, 325, 1345, 1912, 2347, 2739
TseFI GTSAC 7 cut(s) 344, 392, 1510, 2941, 3004, 3040, 3049
TseI GCWGC 5 cut(s) 326, 548, 1667, 1898, 2246
Tsp45I GTSAC 7 cut(s) 344, 392, 1510, 2941, 3004, 3040, 3049
TspGWI ACGGA 3 cut(s) 46, 1899, 2346
TspRI CASTG 7 cut(s) 229, 261, 325, 1345, 1912, 2347, 2739
Van91I CCANNNNNTGG 1 cut(s) 320
VneI GTGCAC 1 cut(s) 2869
VspI ATTAAT 1 cut(s) 1422
XbaI TCTAGA 2 cut(s) 1249, 2810
XceI RCATGY 1 cut(s) 1658
XcmI CCANNNNNNNNNTGG 3 cut(s) 56, 480, 511
XmiI GTMKAC 1 cut(s) 1864
XmnI GAANNNNTTC 2 cut(s) 707, 2923
XspI CTAG 8 cut(s) 698, 804, 1250, 1953, 2469, 2801, 2811, 3066
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.