Prupe.4G104500_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000088
Physical Location & Seq
Forward (+)
5372435 .. 5387162
14728 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G104500.4

Sequence Viewer

Length: 3018 bp
ATGATCGATTCGAGGAGGATGTTGAAGCAACCATGGCATCTTACTGTGTCTGTTACCTTCTTTTGCAGCGTATGCTTCTGGTTTCAGGTGTCCATGGCACAAAAGACGGATCCATCTGAAGTGAGGGCGTTGAACTCAATATTCCAGCAATGGGACACGCAAGCCGTGCCGGGGCTGTGGAATATCAGTGGAGATCCATGCAGTGGATCTGCCGTTAATGGAACCCCGTTTGAGGATCCAGCTAATAATCCATCCATCAAATGCGATTGTACTTATGAAAAAAATACTACCTGCCACATCACCCTACTGAGAGTTTTTGAACTGAACAAACGAGGGGTGTTTCCAGAAGAATTTGTGGCTTTAAGATATCTGACCTTTTTGAAAATTGATCAGAATTATTTCACCGGTCCCCTACCAGCATTCATCGGCAATATGTCTGCGTTGACGATATTGTCAATTGCCATCAATTCATTCTCTGGACCCATCCCCAAGGAGCTTGGAAACCTTAAGGAGCTAACTATCCTTTCCTTTGAATTTAATAATTTCTCTGGAACACTCCCTCCAGAACTTGGTAATTTAGTCAAGCTCGAGAAATTGTACATGGAAAGCTGTGGACTCAGTGGTGAAATTCCTTCAACATTTGCTAATCTCATCAACATGCAAATCCTCTATGCATCAGACATTCCTTTGTCAGGAAAGATACCTGCTTTCATTGGGAATTGGACAAAACTAACTGTTTTGAGATTTCAAGGGAACTCTTTTGAAGGCCCAATACCAACCAGTTTTTCTCAACTGACTTCATTGAAAACTCTGCGAATCAGTGATATATCTAATGTAAGCTCCTCTCTTGATTTTATAAGAAATTTGAAGAACTTGACTGAGTTAGTTCTACGGAATGCATTAATCAATGGTAGCATTCCTTCTGATATTGGAGACTATCAAAATTTAACGATAATAAATCTGGGTTTCAACAATTTAACAGGCCAACTCCCAAGTTCTTTGTTCAACATGAGTTCTCTTCAATATTTATTTCTTGGAAACAATAGTCTGTCTGGACCTCTTCCAAGCCAAAAGGGCGATCTACTACATACTATAGATTTGTCTTACAACTATTTGTCAGGAAGCTTTCCCGAATGGGTAAACACAATATCGCAATTTAACTTAGTGGTCAACAACTTCACATTTGACAGTTCAAACATAACTCTTCCTGGATTGAATTGCCTCCAGAGGAATTTTCCATGCAATCGAAATACCCCAAGATATACAGACTTCTCAATCAAGTGTGGAGGACCACAAATGAGAGTAAGTGGCGGGATATTGTATGAGGCTGAAGACTCAGCTCTTGGGCCAGCAACATTTAATGTAGCCAGTACACAGAAATGGGCTGTTAGCAATGTGGGTTTGTTTAATGATATGATGGATCAATATGATAGAATGCTTCAATCATTTGGGAAAACCACCCGTACGCAAGTCTCCGGTACAGATGTGACCCCAAAGCTTTTCGAGACTTCAAGACAGTCCCCAGGTTCACTGAGATACTATGGCCTGGGTCTTCATAATGGACCTTACACTGTAACATTGCAATTTGCAGAAACGGTTTTTGTTAGCCGCACTACACAAACTTGGCAAAGTCTAGGAAGGCGTGTATTTGATATCTATATTCAAGGGAACCTCATAAGGAAGGACTTCGACATATCAGAGGAGGCAGGTGGGGTTAACATAGCGGTTGCAAGACTCTTCAAGGTTCATGTGACAGAGAATTACCTAGATATTCATCTGTTCTGGGCTGGTAAGGGAACATGTTGCAATCCTGACCTAGGTAATTACGGCCCGCTAATATCGGCTGTCCACGCTGCTTCAGATACACCAACTACTCCAGGAATGAAGAGCAGGATTGGGTTGATAGTTGGTATTGCAATCCCTGTCGGAGTAGTGATCTGGCTATTATTATTTGCAGTTTTATATATGCGGAGAAAAAGATCAGAAAAAGATGACGATGAAGATCTTCTAGGATTAGGCCCCCGACCAAATACTTTCAGTTATGCTGAGTTGAGAGCTGCAACAGAAGATTTTAATCCTTCAAATAAGCTAGGAGAGGGAGGATATGGACCTGTTTATAAGGGTACACTGTCTGATGGGAGGGTAGTGGCTATGAAGCAACTTTCAGTAGCATCTCACCAAGGGAAGAGTCAATTTTTAACCGAGATTGCTACAATATCTGCAGTCCAACATCGCAATCTAGTGAAATTGTTTGGATGCTGCATCGAACGAACCCAGCGCATTTTGGTTTATGAGTATCTTGAAAACAAGAGCCTTGATCAGGCACTTTTTGGAAGAAATGACTTGCACCTTGACTGGCCTACCCGCTTCAATATATTGTTGGGAACAGCAAGAGGACTTGCTTACCTTCATGAGGAGTCAAGGCCCAGGATTGTACATCGAGATGTCAAAGCCAGTAATATTTTGCTCGATGCAAAACTCTCCCCAAAAATATCAGATTTTGGATTGGCAAAGCTTTATGATGACGAAAAAACCCACATTAGCACCCGGGTTGCAGGGACAATAGGTTATTTGGCACCGGAGTATGCAATGCGTGGACATCTGACAGAAAAGGCTGATGTTTTCGGTTTCGGGGTTGTTGCTTTGGAGATCATCAGCGGGAGACCAAATTCTGACAACAACTTGGATCCTGAGAAGATTTATCTTCTTGAATGGGCATGGACTCTACATGAAAATGACCAGAGTCTGGGGCTGGTGGATCCGAGATTGACAGAGTTTGATGAAAATGACGCAACTAGATTGATAAAAGCAGCTCTCCTCTGCACTCAGGCTTCACCAATGATGAGGCCATCGATGTCACGTGTGGTGGCAATGCTTTCTGGAGATATTGAAGCAAGCACTGTTATGTCAAAGCCAAGTTATTTGACAGATTGGGATTTCAAAGATGTAACCACCACAAGCAGCTTTTTGTTGGATGATGATACCTCATCAACTGAGAGCATTGTTGTCCACAAGTAG

Protein Analysis

1006

Amino Acids

111.61

Weight (kDa)

5.83

Isoelectric Point (pI)

37.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 857, 2118
AarI CACCTGC 1 cut(s) 1697
AasI GACNNNNNNGTC 1 cut(s) 451
Acc36I ACCTGC 3 cut(s) 299, 712, 1697
AccB1I GGYRCC 1 cut(s) 2575
AccB7I CCANNNNNTGG 3 cut(s) 203, 569, 2746
AciI CCGC 7 cut(s) 1311, 1609, 1724, 1832, 1969, 2365, 2658
AcsI RAATTY 7 cut(s) 350, 533, 627, 862, 943, 1231, 2668
AcuI CTGAAG 3 cut(s) 138, 1350, 1842
AcvI CACGTG 1 cut(s) 2861
AfaI GTAC 7 cut(s) 271, 599, 1372, 1465, 1480, 2125, 2436
AflII CTTAAG 1 cut(s) 506
AflIII ACRYGT 2 cut(s) 1799, 2860
AgeI ACCGGT 1 cut(s) 404
AjnI CCWGG 5 cut(s) 1207, 1522, 1545, 1876, 2426
AjuI GAANNNNNNNTTGG 2 cut(s) 769, 801
AloI GAACNNNNNNTCC 2 cut(s) 544, 576
Alw26I GTCTC 4 cut(s) 927, 1477, 1499, 2656
AlwNI CAGNNNCTG 1 cut(s) 2746
Ama87I CYCGRG 2 cut(s) 587, 2547
AoxI GGCC 9 cut(s) 766, 982, 1346, 1543, 1828, 2017, 2357, 2423, 2846
ApeKI GCWGC 6 cut(s) 66, 1853, 2057, 2259, 2810, 2961
ApoI RAATTY 7 cut(s) 350, 533, 627, 862, 943, 1231, 2668
AseI ATTAAT 1 cut(s) 902
AsiGI ACCGGT 1 cut(s) 404
Asp700I GAANNNNTTC 3 cut(s) 398, 1685, 2004
AspA2I CCTAGG 1 cut(s) 1816
AspLEI GCGC 1 cut(s) 2280
AsuC2I CCSGG 3 cut(s) 171, 2548, 2549
AsuHPI GGTGA 5 cut(s) 292, 394, 635, 2168, 2826
AvaI CYCGRG 2 cut(s) 587, 2547
AvaII GGWCC 6 cut(s) 407, 479, 1055, 1289, 1562, 2108
AvrII CCTAGG 1 cut(s) 1816
BaeI ACNNNNGTAYC 2 cut(s) 1470, 1503
BamHI GGATCC 4 cut(s) 109, 235, 2686, 2758
BanI GGYRCC 1 cut(s) 2575
BarI GAAGNNNNNNTAC 4 cut(s) 756, 788, 904, 936
BbrPI CACGTG 1 cut(s) 2861
BbsI GAAGAC 2 cut(s) 1338, 1544
BbvI GCAGC 6 cut(s) 78, 1840, 2044, 2246, 2822, 2973
BccI CCATC 8 cut(s) 121, 259, 263, 470, 491, 1411, 2129, 2857
BceAI ACGGC 3 cut(s) 149, 197, 1843
BciT130I CCWGG 5 cut(s) 1209, 1524, 1547, 1878, 2428
BclI TGATCA 2 cut(s) 388, 2317
BcnI CCSGG 3 cut(s) 171, 2548, 2549
BcoDI GTCTC 4 cut(s) 927, 1477, 1499, 2656
BfaI CTAG 7 cut(s) 1634, 1766, 1817, 2009, 2090, 2240, 2796
BfmI CTRYAG 2 cut(s) 1092, 2220
BfrI CTTAAG 1 cut(s) 506
BfuAI ACCTGC 3 cut(s) 299, 712, 1697
BglI GCCNNNNNGGC 1 cut(s) 1074
BglII AGATCT 1 cut(s) 2002
BisI GCNGC 7 cut(s) 67, 1609, 1854, 2058, 2260, 2811, 2962
BlnI CCTAGG 1 cut(s) 1816
BlsI GCNGC 7 cut(s) 68, 1610, 1855, 2059, 2261, 2812, 2963
Bme1390I CCNGG 8 cut(s) 171, 1209, 1524, 1547, 1878, 2428, 2548, 2549
Bme18I GGWCC 6 cut(s) 407, 479, 1055, 1289, 1562, 2108
BmeT110I CYCGRG 2 cut(s) 587, 2547
BmrFI CCNGG 8 cut(s) 171, 1209, 1524, 1547, 1878, 2428, 2548, 2549
BmsI GCATC 6 cut(s) 46, 683, 2180, 2246, 2271, 2461
BoxI GACNNNNGTC 1 cut(s) 2742
BpiI GAAGAC 2 cut(s) 1338, 1544
BpmI CTGGAG 4 cut(s) 546, 1208, 1860, 2901
BpuMI CCSGG 3 cut(s) 171, 2548, 2549
Bsa29I ATCGAT 2 cut(s) 6, 2852
BsaAI YACGTR 1 cut(s) 2861
BsaBI GATNNNNATC 3 cut(s) 1773, 2001, 2073
BsaI GGTCTC 1 cut(s) 2656
BsaWI WCCGGW 3 cut(s) 404, 1475, 2578
BsaXI ACNNNNNCTCC 2 cut(s) 544, 574
Bse118I RCCGGY 1 cut(s) 404
Bse1I ACTGG 4 cut(s) 780, 1368, 2360, 2454
Bse3DI GCAATG 5 cut(s) 155, 1399, 1577, 2595, 2877
Bse8I GATNNNNATC 3 cut(s) 1773, 2001, 2073
BseBI CCWGG 5 cut(s) 1209, 1524, 1547, 1878, 2428
BseCI ATCGAT 2 cut(s) 6, 2852
BseGI GGATG 5 cut(s) 24, 251, 483, 2261, 2980
BseJI GATNNNNATC 3 cut(s) 1773, 2001, 2073
BseMI GCAATG 5 cut(s) 155, 1399, 1577, 2595, 2877
BseMII CTCAG 9 cut(s) 299, 631, 870, 1350, 1523, 2037, 2682, 2840, 2985
BseNI ACTGG 4 cut(s) 780, 1368, 2360, 2454
BseRI GAGGAG 5 cut(s) 28, 832, 1715, 2429, 2807
BseXI GCAGC 6 cut(s) 78, 1840, 2044, 2246, 2822, 2973
BseYI CCCAGC 1 cut(s) 2274
BsgI GTGCAG 1 cut(s) 2806
BshFI GGCC 9 cut(s) 768, 984, 1348, 1545, 1830, 2019, 2359, 2425, 2848
BshNI GGYRCC 1 cut(s) 2575
BshTI ACCGGT 1 cut(s) 404
BshVI ATCGAT 2 cut(s) 6, 2852
BsiHKCI CYCGRG 2 cut(s) 587, 2547
BsiSI CCGG 5 cut(s) 170, 405, 1476, 2548, 2579
BsiWI CGTACG 1 cut(s) 1463
BslFI GGGAC 4 cut(s) 167, 393, 1504, 2572
BsmAI GTCTC 4 cut(s) 927, 1477, 1499, 2656
BsmFI GGGAC 4 cut(s) 167, 393, 1504, 2572
BsmI GAATGC 4 cut(s) 419, 901, 915, 1440
BsnI GGCC 9 cut(s) 768, 984, 1348, 1545, 1830, 2019, 2359, 2425, 2848
Bso31I GGTCTC 1 cut(s) 2656
BsoBI CYCGRG 2 cut(s) 587, 2547
Bsp1407I TGTACA 2 cut(s) 597, 2434
Bsp19I CCATGG 2 cut(s) 32, 93
BspACI CCGC 7 cut(s) 1311, 1609, 1724, 1832, 1969, 2365, 2658
BspANI GGCC 9 cut(s) 768, 984, 1348, 1545, 1830, 2019, 2359, 2425, 2848
BspCNI CTCAG 9 cut(s) 300, 630, 871, 1349, 1524, 2038, 2683, 2839, 2986
BspDI ATCGAT 2 cut(s) 6, 2852
BspHI TCATGA 1 cut(s) 2410
BspMAI CTGCAG 1 cut(s) 2224
BspMI ACCTGC 3 cut(s) 299, 712, 1697
BspQI GCTCTTC 1 cut(s) 1880
BspT107I GGYRCC 1 cut(s) 2575
BspTI CTTAAG 1 cut(s) 506
BspTNI GGTCTC 1 cut(s) 2656
BsrDI GCAATG 5 cut(s) 155, 1399, 1577, 2595, 2877
BsrFI RCCGGY 1 cut(s) 404
BsrGI TGTACA 2 cut(s) 597, 2434
BsrI ACTGG 4 cut(s) 780, 1368, 2360, 2454
BssAI RCCGGY 1 cut(s) 404
BssT1I CCWWGG 5 cut(s) 32, 93, 489, 1816, 2179
Bst2UI CCWGG 5 cut(s) 1209, 1524, 1547, 1878, 2428
Bst4CI ACNGT 8 cut(s) 46, 736, 1190, 1518, 1573, 1597, 2130, 2902
Bst6I CTCTTC 6 cut(s) 1023, 1065, 1209, 1742, 1880, 2180
BstAFI CTTAAG 1 cut(s) 506
BstAPI GCANNNNNTGC 2 cut(s) 72, 166
BstAUI TGTACA 2 cut(s) 597, 2434
BstBAI YACGTR 1 cut(s) 2861
BstC8I GCNNGC 4 cut(s) 162, 1350, 1832, 2896
BstDSI CCRYGG 2 cut(s) 32, 93
BstENI CCTNNNNNAGG 4 cut(s) 690, 1815, 2318, 2411
BstF5I GGATG 5 cut(s) 24, 251, 483, 2261, 2980
BstHHI GCGC 1 cut(s) 2280
BstMAI GTCTC 4 cut(s) 927, 1477, 1499, 2656
BstMWI GCNNNNNNNGC 5 cut(s) 34, 72, 166, 1074, 1850
BstNI CCWGG 5 cut(s) 1209, 1524, 1547, 1878, 2428
BstNSI RCATGY 2 cut(s) 661, 1803
BstPAI GACNNNNGTC 1 cut(s) 2742
BstSCI CCNGG 8 cut(s) 169, 1207, 1522, 1545, 1876, 2426, 2546, 2547
BstSFI CTRYAG 2 cut(s) 1092, 2220
BstV1I GCAGC 6 cut(s) 78, 1840, 2044, 2246, 2822, 2973
BstV2I GAAGAC 2 cut(s) 1338, 1544
BstX2I RGATCY 7 cut(s) 109, 193, 206, 235, 2002, 2686, 2758
BstYI RGATCY 7 cut(s) 109, 193, 206, 235, 2002, 2686, 2758
Bsu15I ATCGAT 2 cut(s) 6, 2852
BsuRI GGCC 9 cut(s) 768, 984, 1348, 1545, 1830, 2019, 2359, 2425, 2848
BsuTUI ATCGAT 2 cut(s) 6, 2852
BtgI CCRYGG 2 cut(s) 32, 93
BtgZI GCGATG 1 cut(s) 2216
BtsCI GGATG 5 cut(s) 24, 251, 483, 2261, 2980
BtsI GCAGTG 1 cut(s) 208
BtsIMutI CAGTG 8 cut(s) 193, 208, 625, 826, 1529, 1569, 2126, 2898
BveI ACCTGC 3 cut(s) 299, 712, 1697
Cac8I GCNNGC 4 cut(s) 162, 1350, 1832, 2896
CaiI CAGNNNCTG 1 cut(s) 2746
CciI TCATGA 1 cut(s) 2410
CfoI GCGC 1 cut(s) 2280
Cfr10I RCCGGY 1 cut(s) 404
Cfr9I CCCGGG 1 cut(s) 2547
ClaI ATCGAT 2 cut(s) 6, 2852
CseI GACGC 1 cut(s) 2798
Csp6I GTAC 7 cut(s) 270, 598, 1371, 1464, 1479, 2124, 2435
CspAI ACCGGT 1 cut(s) 404
CviQI GTAC 7 cut(s) 270, 598, 1371, 1464, 1479, 2124, 2435
DrdI GACNNNNNNGTC 1 cut(s) 451
DseDI GACNNNNNNGTC 1 cut(s) 451
Eam1104I CTCTTC 6 cut(s) 1023, 1065, 1209, 1742, 1880, 2180
EarI CTCTTC 6 cut(s) 1023, 1065, 1209, 1742, 1880, 2180
Eco130I CCWWGG 5 cut(s) 32, 93, 489, 1816, 2179
Eco31I GGTCTC 1 cut(s) 2656
Eco32I GATATC 2 cut(s) 368, 1654
Eco47I GGWCC 6 cut(s) 407, 479, 1055, 1289, 1562, 2108
Eco57I CTGAAG 3 cut(s) 138, 1350, 1842
Eco72I CACGTG 1 cut(s) 2861
Eco88I CYCGRG 2 cut(s) 587, 2547
EcoNI CCTNNNNNAGG 4 cut(s) 690, 1815, 2318, 2411
EcoO109I RGGNCCY 1 cut(s) 2018
EcoRII CCWGG 5 cut(s) 1207, 1522, 1545, 1876, 2426
EcoRV GATATC 2 cut(s) 368, 1654
EcoT14I CCWWGG 5 cut(s) 32, 93, 489, 1816, 2179
EcoT22I ATGCAT 2 cut(s) 676, 901
ErhI CCWWGG 5 cut(s) 32, 93, 489, 1816, 2179
FaqI GGGAC 4 cut(s) 167, 393, 1504, 2572
FauI CCCGC 4 cut(s) 1304, 1839, 2372, 2651
FbaI TGATCA 2 cut(s) 388, 2317
Fnu4HI GCNGC 7 cut(s) 67, 1609, 1854, 2058, 2260, 2811, 2962
FokI GGATG 5 cut(s) 31, 238, 470, 2268, 2987
Fsp4HI GCNGC 7 cut(s) 67, 1609, 1854, 2058, 2260, 2811, 2962
FspBI CTAG 7 cut(s) 1634, 1766, 1817, 2009, 2090, 2240, 2796
GlaI GCGC 1 cut(s) 2279
GluI GCNGC 7 cut(s) 67, 1609, 1854, 2058, 2260, 2811, 2962
GsaI CCCAGC 1 cut(s) 2278
GsuI CTGGAG 4 cut(s) 546, 1208, 1860, 2901
HaeIII GGCC 9 cut(s) 768, 984, 1348, 1545, 1830, 2019, 2359, 2425, 2848
HapII CCGG 5 cut(s) 170, 405, 1476, 2548, 2579
HgaI GACGC 1 cut(s) 2798
HhaI GCGC 1 cut(s) 2280
Hin6I GCGC 1 cut(s) 2278
HinP1I GCGC 1 cut(s) 2278
HincII GTYRAC 3 cut(s) 444, 1171, 1717
HindII GTYRAC 3 cut(s) 444, 1171, 1717
HindIII AAGCTT 3 cut(s) 1123, 1496, 2513
HinfI GANTC 9 cut(s) 8, 615, 816, 1334, 1734, 2188, 2417, 2722, 2743
HpaI GTTAAC 1 cut(s) 1717
HpaII CCGG 5 cut(s) 170, 405, 1476, 2548, 2579
HphI GGTGA 5 cut(s) 292, 394, 635, 2168, 2826
HpyAV CCTTC 8 cut(s) 67, 642, 758, 930, 1632, 1675, 2088, 2417
HpyCH4III ACNGT 8 cut(s) 46, 736, 1190, 1518, 1573, 1597, 2130, 2902
HpyCH4IV ACGT 1 cut(s) 2860
HpyF10VI GCNNNNNNNGC 5 cut(s) 34, 72, 166, 1074, 1850
HpySE526I ACGT 1 cut(s) 2860
HspAI GCGC 1 cut(s) 2278
Ksp22I TGATCA 2 cut(s) 388, 2317
KspAI GTTAAC 1 cut(s) 1717
LguI GCTCTTC 1 cut(s) 1880
LmnI GCTCC 3 cut(s) 493, 511, 845
Lsp1109I GCAGC 6 cut(s) 78, 1840, 2044, 2246, 2822, 2973
LweI GCATC 6 cut(s) 46, 683, 2180, 2246, 2271, 2461
MaeI CTAG 7 cut(s) 1634, 1766, 1817, 2009, 2090, 2240, 2796
MaeII ACGT 1 cut(s) 2860
MaeIII GTNAC 6 cut(s) 52, 1486, 1573, 1750, 2856, 2947
MfeI CAATTG 1 cut(s) 456
MflI RGATCY 7 cut(s) 109, 193, 206, 235, 2002, 2686, 2758
MlyI GAGTC 7 cut(s) 609, 1328, 1728, 2197, 2426, 2716, 2752
MmeI TCCRAC 3 cut(s) 1906, 2251, 2952
Mph1103I ATGCAT 2 cut(s) 676, 901
MroXI GAANNNNTTC 3 cut(s) 398, 1685, 2004
MslI CAYNNNNRTG 5 cut(s) 656, 1378, 2442, 2733, 2903
MspA1I CMGCKG 1 cut(s) 2658
MspCI CTTAAG 1 cut(s) 506
MspI CCGG 5 cut(s) 170, 405, 1476, 2548, 2579
MspR9I CCNGG 8 cut(s) 171, 1209, 1524, 1547, 1878, 2428, 2548, 2549
MunI CAATTG 1 cut(s) 456
Mva1269I GAATGC 4 cut(s) 419, 901, 915, 1440
MvaI CCWGG 5 cut(s) 1209, 1524, 1547, 1878, 2428
MwoI GCNNNNNNNGC 5 cut(s) 34, 72, 166, 1074, 1850
NciI CCSGG 3 cut(s) 171, 2548, 2549
NcoI CCATGG 2 cut(s) 32, 93
NmuCI GTSAC 3 cut(s) 1486, 1750, 2856
NsiI ATGCAT 2 cut(s) 676, 901
NspI RCATGY 2 cut(s) 661, 1803
PaeR7I CTCGAG 1 cut(s) 587
PagI TCATGA 1 cut(s) 2410
PaqCI CACCTGC 1 cut(s) 1697
PciI ACATGT 1 cut(s) 1799
PciSI GCTCTTC 1 cut(s) 1880
PctI GAATGC 4 cut(s) 419, 901, 915, 1440
PdmI GAANNNNTTC 3 cut(s) 398, 1685, 2004
PfeI GAWTC 2 cut(s) 8, 816
Pfl23II CGTACG 1 cut(s) 1463
PflMI CCANNNNNTGG 3 cut(s) 203, 569, 2746
PfoI TCCNGGA 2 cut(s) 1207, 1876
PinAI ACCGGT 1 cut(s) 404
PkrI GCNGC 7 cut(s) 68, 1610, 1855, 2059, 2261, 2812, 2963
PleI GAGTC 7 cut(s) 609, 1328, 1728, 2196, 2425, 2716, 2751
PmaCI CACGTG 1 cut(s) 2861
PmlI CACGTG 1 cut(s) 2861
PpsI GAGTC 7 cut(s) 609, 1328, 1728, 2196, 2425, 2716, 2751
Ppu21I YACGTR 1 cut(s) 2861
PscI ACATGT 1 cut(s) 1799
PshAI GACNNNNGTC 1 cut(s) 2742
PshBI ATTAAT 1 cut(s) 902
PsiI TTATAA 2 cut(s) 857, 2118
Psp6I CCWGG 5 cut(s) 1207, 1522, 1545, 1876, 2426
PspCI CACGTG 1 cut(s) 2861
PspFI CCCAGC 1 cut(s) 2274
PspGI CCWGG 5 cut(s) 1207, 1522, 1545, 1876, 2426
PspLI CGTACG 1 cut(s) 1463
PstI CTGCAG 1 cut(s) 2224
PstNI CAGNNNCTG 1 cut(s) 2746
PsuI RGATCY 7 cut(s) 109, 193, 206, 235, 2002, 2686, 2758
RsaI GTAC 7 cut(s) 271, 599, 1372, 1465, 1480, 2125, 2436
RsaNI GTAC 7 cut(s) 270, 598, 1371, 1464, 1479, 2124, 2435
RseI CAYNNNNRTG 5 cut(s) 656, 1378, 2442, 2733, 2903
SapI GCTCTTC 1 cut(s) 1880
SatI GCNGC 7 cut(s) 67, 1609, 1854, 2058, 2260, 2811, 2962
SchI GAGTC 7 cut(s) 609, 1328, 1728, 2197, 2426, 2716, 2752
ScrFI CCNGG 8 cut(s) 171, 1209, 1524, 1547, 1878, 2428, 2548, 2549
SfaNI GCATC 6 cut(s) 46, 683, 2180, 2246, 2271, 2461
SfcI CTRYAG 2 cut(s) 1092, 2220
Sfr274I CTCGAG 1 cut(s) 587
SinI GGWCC 6 cut(s) 407, 479, 1055, 1289, 1562, 2108
SlaI CTCGAG 1 cut(s) 587
SmaI CCCGGG 1 cut(s) 2549
SmiMI CAYNNNNRTG 5 cut(s) 656, 1378, 2442, 2733, 2903
SmlI CTYRAG 2 cut(s) 506, 587
SmoI CTYRAG 2 cut(s) 506, 587
SsiI CCGC 7 cut(s) 1311, 1609, 1724, 1832, 1969, 2365, 2658
SspI AATATT 3 cut(s) 141, 1025, 2461
SspMI CTAG 7 cut(s) 1634, 1766, 1817, 2009, 2090, 2240, 2796
StyD4I CCNGG 8 cut(s) 169, 1207, 1522, 1545, 1876, 2426, 2546, 2547
StyI CCWWGG 5 cut(s) 32, 93, 489, 1816, 2179
TaaI ACNGT 8 cut(s) 46, 736, 1190, 1518, 1573, 1597, 2130, 2902
TaiI ACGT 1 cut(s) 2863
TatI WGTACW 4 cut(s) 269, 597, 1370, 2434
TauI GCSGC 1 cut(s) 1611
TfiI GAWTC 2 cut(s) 8, 816
TscAI CASTG 8 cut(s) 193, 208, 625, 826, 1536, 1576, 2133, 2905
TseFI GTSAC 3 cut(s) 1486, 1750, 2856
TseI GCWGC 6 cut(s) 66, 1853, 2057, 2259, 2810, 2961
Tsp45I GTSAC 3 cut(s) 1486, 1750, 2856
TspGWI ACGGA 2 cut(s) 122, 907
TspMI CCCGGG 1 cut(s) 2547
TspRI CASTG 8 cut(s) 193, 208, 625, 826, 1536, 1576, 2133, 2905
Van91I CCANNNNNTGG 3 cut(s) 203, 569, 2746
Vha464I CTTAAG 1 cut(s) 506
VpaK11BI GGWCC 6 cut(s) 407, 479, 1055, 1289, 1562, 2108
VspI ATTAAT 1 cut(s) 902
XagI CCTNNNNNAGG 4 cut(s) 690, 1815, 2318, 2411
XapI RAATTY 7 cut(s) 350, 533, 627, 862, 943, 1231, 2668
XceI RCATGY 2 cut(s) 661, 1803
XhoI CTCGAG 1 cut(s) 587
XmaI CCCGGG 1 cut(s) 2547
XmaJI CCTAGG 1 cut(s) 1816
XmnI GAANNNNTTC 3 cut(s) 398, 1685, 2004
XspI CTAG 7 cut(s) 1634, 1766, 1817, 2009, 2090, 2240, 2796
Zsp2I ATGCAT 2 cut(s) 676, 901
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.