Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004990.1

Orthogroup ID

OG0000088

Physical Location & Seq

Genomic Coordinates Forward (+)

75115 .. 81161

Gene Structure 6047 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004990.1_g000022.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1464 bp

atggtattgattgatggtgaaggcggatatattagtggtgatgatggaagtggtgcaacatttgcggggttcgaggaagctagcaggctcatacctaatgttacaacttggtttaagaattctggccccatccttcccgtaactgcgttagtgaactcggctgtcattgctgattggggaggaaaaagggaggcgagatctgtggtgggcgttagaagtcggtttgaacggggatggtttttgccggttatgctatctttgactcccggatcaaggttggatagggtggccggtaaagattggccttgggacaatcaaggtggaggagcgttgccattggtgactgtcagcaagtggagtttcagtgctggtgggggcgatctgagggaggttttggagttccgatgcagatggttatctattgcaggctgtgttcggtggcagatggtgactcgttacaagcggagctccaacgcaagcgatggcgttttcaggcgccggcgacatcacagtggggttggcggtgatgatgaagcggcagcagatcaaggaagccaccgcctccgtgaaaatccgaaacaatgtgaatctcgccgccgggtcaatccaaaactcaaattctgcagagccaccactctagtttctccaccacccggagccatatttgagataagccaatcaccagctagtcctccaacccaaccggtcgcatcttccgccgcccaatccggtcacgacccccaaaccgccgccggggaagcaccggcaaaaaaaccaacgggcctcacactccggtgggtgcccagagcatttttttttggattccggtcaccagtcgccggagtcagtcaccggagtccccggccgaccactggtgaccggagtccggcaaggtttccgatgacttctctcatttccatatcaaccaagatcaaagcattcatgtcagggggtgcctccttatcagttttggtcttatttttgtgcatctctggtatggcacaagctcaagtttctgctcctgctcctcaacctcaagctactaatgccaccactgacccatctcaagcgagagctttgaattcagtatttgagaaatggaagattcgggccaatccggagcaatggaacacaaccggagacccatgcactggagctgccataaacgccaccaaatttgatgacaccgattacaaccccttaatcatatgtgactgctcttatcaatccagcaccatttgccacattacccaactgaaggtttatgacttgaaagttgttggtgtaattccagacgagttatggagtttgacttctctcaccaatctgtatgctttctctgaactcgtgcacttgagttggactcgctttagttacccaatttgtaatctttctcccatgtcttgtaggaatttggcactgaattacttgacaggacctctctctgcagccattgcaaactaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

487

Amino Acids

52.74

Weight (kDa)

9.4

Isoelectric Point (pI)

53.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000088)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca	FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica	MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica	Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis	pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis	RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata	RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora	Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii	Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa	Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha	Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana	Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	495, 799, 953
AccB7I	CCANNNNNTGG	1 cut(s)	1151
AccIII	TCCGGA	1 cut(s)	1117
AclWI	GGATC	1 cut(s)	277
AcoI	YGGCCR	2 cut(s)	288, 863
AcsI	RAATTY	5 cut(s)	118, 617, 1081, 1175, 1411
AcuI	CTGAAG	1 cut(s)	1277
AcyI	GRCGYC	1 cut(s)	496
AfiI	CCNNNNNNNGG	8 cut(s)	273, 653, 753, 839, 872, 886, 1151, 1258
AgeI	ACCGGT	1 cut(s)	703
AgsI	TTSAA	3 cut(s)	227, 1081, 1273
AleI	CACNNNNGTG	1 cut(s)	793
AluBI	AGCT	7 cut(s)	80, 468, 686, 1007, 1040, 1076, 1157
AluI	AGCT	7 cut(s)	80, 468, 686, 1007, 1040, 1076, 1157
Alw21I	GWGCWC	2 cut(s)	470, 1353
Alw26I	GTCTC	1 cut(s)	1134
Alw44I	GTGCAC	1 cut(s)	1349
AlwI	GGATC	1 cut(s)	277
Aor13HI	TCCGGA	1 cut(s)	1117
AoxI	GGCC	6 cut(s)	124, 288, 302, 781, 863, 1110
ApaLI	GTGCAC	1 cut(s)	1349
ApeKI	GCWGC	3 cut(s)	539, 1157, 1448
ApoI	RAATTY	5 cut(s)	118, 617, 1081, 1175, 1411
AsiGI	ACCGGT	1 cut(s)	703
AspLEI	GCGC	1 cut(s)	498
AspS9I	GGNCC	4 cut(s)	125, 781, 1110, 1436
AsuC2I	CCSGG	5 cut(s)	267, 599, 654, 754, 862
AsuNHI	GCTAGC	1 cut(s)	80
AvaII	GGWCC	1 cut(s)	1436
BaeGI	GKGCMC	2 cut(s)	804, 1353
BanI	GGYRCC	3 cut(s)	495, 799, 953
BanII	GRGCYC	1 cut(s)	470
BauI	CACGAG	1 cut(s)	1346
Bbv12I	GWGCWC	2 cut(s)	470, 1353
BbvI	GCAGC	3 cut(s)	551, 1144, 1460
BccI	CCATC	8 cut(s)	8, 38, 137, 228, 405, 439, 476, 1069
BcnI	CCSGG	5 cut(s)	267, 599, 654, 754, 862
BcoDI	GTCTC	1 cut(s)	1134
BfaI	CTAG	3 cut(s)	81, 638, 687
BfmI	CTRYAG	2 cut(s)	622, 1446
BfoI	RGCGCY	1 cut(s)	499
BglII	AGATCT	1 cut(s)	197
BisI	GCNGC	7 cut(s)	537, 540, 595, 720, 750, 1158, 1449
BlsI	GCNGC	7 cut(s)	538, 541, 596, 721, 751, 1159, 1450
Bme1390I	CCNGG	5 cut(s)	267, 599, 654, 754, 862
Bme18I	GGWCC	1 cut(s)	1436
BmgT120I	GGNCC	4 cut(s)	125, 781, 1110, 1436
BmiI	GGNNCC	5 cut(s)	127, 497, 658, 801, 955
BmrFI	CCNGG	5 cut(s)	267, 599, 654, 754, 862
BmsI	GCATC	3 cut(s)	395, 719, 996
BmtI	GCTAGC	1 cut(s)	84
BoxI	GACNNNNGTC	1 cut(s)	882
BplI	GAGNNNNNCTC	2 cut(s)	1348, 1380
BpmI	CTGGAG	1 cut(s)	1173
BpuEI	CTTGAG	4 cut(s)	993, 1020, 1050, 1375
BpuMI	CCSGG	5 cut(s)	267, 599, 654, 754, 862
BsaBI	GATNNNNATC	1 cut(s)	415
BsaHI	GRCGYC	1 cut(s)	496
BsaI	GGTCTC	1 cut(s)	1134
BsaJI	CCNNGG	3 cut(s)	305, 753, 860
BsaWI	WCCGGW	8 cut(s)	703, 728, 792, 825, 852, 879, 1117, 1136
BsaXI	ACNNNNNCTCC	2 cut(s)	349, 379
Bsc4I	CCNNNNNNNGG	8 cut(s)	273, 653, 753, 839, 872, 886, 1151, 1258
Bse118I	RCCGGY	5 cut(s)	244, 290, 498, 703, 763
Bse1I	ACTGG	3 cut(s)	833, 877, 1156
Bse3DI	GCAATG	3 cut(s)	165, 1130, 1452
Bse8I	GATNNNNATC	1 cut(s)	415
BseAI	TCCGGA	1 cut(s)	1117
BseDI	CCNNGG	3 cut(s)	305, 753, 860
BseGI	GGATG	2 cut(s)	129, 239
BseJI	GATNNNNATC	1 cut(s)	415
BseLI	CCNNNNNNNGG	8 cut(s)	273, 653, 753, 839, 872, 886, 1151, 1258
BseMI	GCAATG	3 cut(s)	165, 1130, 1452
BseMII	CTCAG	1 cut(s)	374
BseNI	ACTGG	3 cut(s)	833, 877, 1156
BseRI	GAGGAG	2 cut(s)	339, 1017
BseSI	GKGCMC	2 cut(s)	804, 1353
BseX3I	CGGCCG	1 cut(s)	863
BseXI	GCAGC	3 cut(s)	551, 1144, 1460
Bsh1285I	CGRYCG	2 cut(s)	708, 866
BshFI	GGCC	6 cut(s)	126, 290, 304, 783, 865, 1112
BshNI	GGYRCC	3 cut(s)	495, 799, 953
BshTI	ACCGGT	1 cut(s)	703
BsiEI	CGRYCG	2 cut(s)	708, 866
BsiHKAI	GWGCWC	2 cut(s)	470, 1353
BslFI	GGGAC	2 cut(s)	323, 843
BslI	CCNNNNNNNGG	8 cut(s)	273, 653, 753, 839, 872, 886, 1151, 1258
BsmAI	GTCTC	1 cut(s)	1134
BsmFI	GGGAC	2 cut(s)	323, 843
BsmI	GAATGC	1 cut(s)	938
BsnI	GGCC	6 cut(s)	126, 290, 304, 783, 865, 1112
Bso31I	GGTCTC	1 cut(s)	1134
Bsp1286I	GDGCHC	3 cut(s)	470, 804, 1353
Bsp13I	TCCGGA	1 cut(s)	1117
Bsp143I	GATC	5 cut(s)	197, 269, 379, 544, 930
BspANI	GGCC	6 cut(s)	126, 290, 304, 783, 865, 1112
BspCNI	CTCAG	1 cut(s)	375
BspEI	TCCGGA	1 cut(s)	1117
BspLI	GGNNCC	5 cut(s)	127, 497, 658, 801, 955
BspMAI	CTGCAG	2 cut(s)	626, 1450
BspOI	GCTAGC	1 cut(s)	84
BspPI	GGATC	1 cut(s)	277
BspT107I	GGYRCC	3 cut(s)	495, 799, 953
BspTNI	GGTCTC	1 cut(s)	1134
BsrDI	GCAATG	3 cut(s)	165, 1130, 1452
BsrFI	RCCGGY	5 cut(s)	244, 290, 498, 703, 763
BsrI	ACTGG	3 cut(s)	833, 877, 1156
BssAI	RCCGGY	5 cut(s)	244, 290, 498, 703, 763
BssECI	CCNNGG	3 cut(s)	305, 753, 860
BssMI	GATC	5 cut(s)	197, 269, 379, 544, 930
BssNI	GRCGYC	1 cut(s)	496
BssSI	CACGAG	1 cut(s)	1346
BssT1I	CCWWGG	1 cut(s)	305
Bst2BI	CACGAG	1 cut(s)	1346
Bst4CI	ACNGT	2 cut(s)	346, 512
BstACI	GRCGYC	1 cut(s)	496
BstAPI	GCANNNNNTGC	3 cut(s)	62, 1239, 1454
BstC8I	GCNNGC	5 cut(s)	82, 86, 427, 478, 500
BstDEI	CTNAG	1 cut(s)	383
BstEII	GGTNACC	2 cut(s)	828, 875
BstF5I	GGATG	2 cut(s)	129, 239
BstH2I	RGCGCY	1 cut(s)	499
BstHHI	GCGC	1 cut(s)	498
BstKTI	GATC	5 cut(s)	200, 272, 382, 547, 933
BstMAI	GTCTC	1 cut(s)	1134
BstMBI	GATC	5 cut(s)	197, 269, 379, 544, 930
BstMCI	CGRYCG	2 cut(s)	708, 866
BstMWI	GCNNNNNNNGC	9 cut(s)	62, 167, 250, 716, 758, 1046, 1166, 1239, 1454
BstPAI	GACNNNNGTC	1 cut(s)	882
BstPI	GGTNACC	2 cut(s)	828, 875
BstSCI	CCNGG	5 cut(s)	265, 597, 652, 752, 860
BstSFI	CTRYAG	2 cut(s)	622, 1446
BstSLI	GKGCMC	2 cut(s)	804, 1353
BstV1I	GCAGC	3 cut(s)	551, 1144, 1460
BstX2I	RGATCY	1 cut(s)	197
BstYI	RGATCY	1 cut(s)	197
BstZI	CGGCCG	1 cut(s)	863
BsuRI	GGCC	6 cut(s)	126, 290, 304, 783, 865, 1112
BtgZI	GCGATG	1 cut(s)	495
BtsCI	GGATG	2 cut(s)	129, 239
BtsIMutI	CAGTG	6 cut(s)	370, 517, 870, 1053, 1149, 1418
Cac8I	GCNNGC	5 cut(s)	82, 86, 427, 478, 500
CfoI	GCGC	1 cut(s)	498
Cfr10I	RCCGGY	5 cut(s)	244, 290, 498, 703, 763
Cfr13I	GGNCC	4 cut(s)	125, 781, 1110, 1436
CspAI	ACCGGT	1 cut(s)	703
CspCI	CAANNNNNGTGG	4 cut(s)	301, 336, 1159, 1194
CviAII	CATG	3 cut(s)	943, 1146, 1399
DdeI	CTNAG	1 cut(s)	383
DinI	GGCGCC	1 cut(s)	497
DpnI	GATC	5 cut(s)	199, 271, 381, 546, 932
DpnII	GATC	5 cut(s)	197, 269, 379, 544, 930
EaeI	YGGCCR	2 cut(s)	288, 863
EagI	CGGCCG	1 cut(s)	863
EciI	GGCGGA	2 cut(s)	39, 706
Ecl136II	GAGCTC	1 cut(s)	468
EclXI	CGGCCG	1 cut(s)	863
Eco130I	CCWWGG	1 cut(s)	305
Eco24I	GRGCYC	1 cut(s)	470
Eco31I	GGTCTC	1 cut(s)	1134
Eco47I	GGWCC	1 cut(s)	1436
Eco52I	CGGCCG	1 cut(s)	863
Eco53kI	GAGCTC	1 cut(s)	468
Eco57I	CTGAAG	1 cut(s)	1277
Eco91I	GGTNACC	2 cut(s)	828, 875
EcoICRI	GAGCTC	1 cut(s)	468
EcoO109I	RGGNCCY	1 cut(s)	1436
EcoO65I	GGTNACC	2 cut(s)	828, 875
EcoRI	GAATTC	2 cut(s)	118, 1081
EcoT14I	CCWWGG	1 cut(s)	305
EcoT38I	GRGCYC	1 cut(s)	470
EgeI	GGCGCC	1 cut(s)	497
EheI	GGCGCC	1 cut(s)	497
ErhI	CCWWGG	1 cut(s)	305
FaeI	CATG	3 cut(s)	946, 1149, 1402
FaqI	GGGAC	2 cut(s)	323, 843
FatI	CATG	3 cut(s)	942, 1145, 1398
FauI	CCCGC	1 cut(s)	58
FauNDI	CATATG	1 cut(s)	1208
Fnu4HI	GCNGC	7 cut(s)	537, 540, 595, 720, 750, 1158, 1449
FokI	GGATG	2 cut(s)	116, 246
FriOI	GRGCYC	1 cut(s)	470
Fsp4HI	GCNGC	7 cut(s)	537, 540, 595, 720, 750, 1158, 1449
FspBI	CTAG	3 cut(s)	81, 638, 687
GlaI	GCGC	1 cut(s)	497
GluI	GCNGC	7 cut(s)	537, 540, 595, 720, 750, 1158, 1449
GsuI	CTGGAG	1 cut(s)	1173
HaeII	RGCGCY	1 cut(s)	499
HaeIII	GGCC	6 cut(s)	126, 290, 304, 783, 865, 1112
HhaI	GCGC	1 cut(s)	498
Hin1I	GRCGYC	1 cut(s)	496
Hin1II	CATG	3 cut(s)	946, 1149, 1402
Hin6I	GCGC	1 cut(s)	496
HinP1I	GCGC	1 cut(s)	496
HinfI	GANTC	9 cut(s)	262, 451, 587, 822, 843, 856, 883, 1105, 1363
Hpy166II	GTNNAC	2 cut(s)	154, 1351
Hpy188I	TCNGA	5 cut(s)	384, 404, 576, 900, 1342
Hpy188III	TCNNGA	3 cut(s)	734, 1118, 1292
Hpy8I	GTNNAC	2 cut(s)	154, 1351
HpyAV	CCTTC	3 cut(s)	14, 143, 1252
HpyCH4III	ACNGT	2 cut(s)	346, 512
HpyCH4V	TGCA	9 cut(s)	56, 408, 425, 624, 987, 1149, 1351, 1448, 1457
HpyF10VI	GCNNNNNNNGC	9 cut(s)	62, 167, 250, 716, 758, 1046, 1166, 1239, 1454
HpyF3I	CTNAG	1 cut(s)	383
Hsp92I	GRCGYC	1 cut(s)	496
Hsp92II	CATG	3 cut(s)	946, 1149, 1402
HspAI	GCGC	1 cut(s)	496
KasI	GGCGCC	1 cut(s)	495
Kpn2I	TCCGGA	1 cut(s)	1117
KroI	GCCGGC	1 cut(s)	498
KroNI	GCCGGC	1 cut(s)	500
Kzo9I	GATC	5 cut(s)	197, 269, 379, 544, 930
LmnI	GCTCC	8 cut(s)	326, 465, 473, 656, 1024, 1030, 1120, 1154
Lsp1109I	GCAGC	3 cut(s)	551, 1144, 1460
LweI	GCATC	3 cut(s)	395, 719, 996
MaeI	CTAG	3 cut(s)	81, 638, 687
MalI	GATC	5 cut(s)	199, 271, 381, 546, 932
MboI	GATC	5 cut(s)	197, 269, 379, 544, 930
MboII	GAAGA	2 cut(s)	705, 1114
MflI	RGATCY	1 cut(s)	197
MhlI	GDGCHC	3 cut(s)	470, 804, 1353
MluCI	AATT	8 cut(s)	118, 617, 1081, 1175, 1287, 1380, 1411, 1423
Mly113I	GGCGCC	1 cut(s)	496
MlyI	GAGTC	6 cut(s)	256, 445, 852, 865, 892, 1357
MmeI	TCCRAC	4 cut(s)	258, 495, 719, 1340
MreI	CGCCGGCG	1 cut(s)	498
MroI	TCCGGA	1 cut(s)	1117
MroNI	GCCGGC	1 cut(s)	498
MseI	TTAA	2 cut(s)	114, 1202
MslI	CAYNNNNRTG	2 cut(s)	510, 793
MspR9I	CCNGG	5 cut(s)	267, 599, 654, 754, 862
Mva1269I	GAATGC	1 cut(s)	938
MwoI	GCNNNNNNNGC	9 cut(s)	62, 167, 250, 716, 758, 1046, 1166, 1239, 1454
NaeI	GCCGGC	1 cut(s)	500
NarI	GGCGCC	1 cut(s)	496
NciI	CCSGG	5 cut(s)	267, 599, 654, 754, 862
NdeI	CATATG	1 cut(s)	1208
NdeII	GATC	5 cut(s)	197, 269, 379, 544, 930
NgoMIV	GCCGGC	1 cut(s)	498
NheI	GCTAGC	1 cut(s)	80
NlaIII	CATG	3 cut(s)	946, 1149, 1402
NlaIV	GGNNCC	5 cut(s)	127, 497, 658, 801, 955
NmeAIII	GCCGAG	1 cut(s)	137
NmuCI	GTSAC	7 cut(s)	340, 448, 731, 828, 848, 875, 1211
OliI	CACNNNNGTG	1 cut(s)	793
PctI	GAATGC	1 cut(s)	938
PdiI	GCCGGC	1 cut(s)	500
PfeI	GAWTC	3 cut(s)	587, 822, 1105
PflMI	CCANNNNNTGG	1 cut(s)	1151
PfoI	TCCNGGA	1 cut(s)	265
PinAI	ACCGGT	1 cut(s)	703
PkrI	GCNGC	7 cut(s)	538, 541, 596, 721, 751, 1159, 1450
PleI	GAGTC	6 cut(s)	256, 445, 851, 864, 891, 1357
PluTI	GGCGCC	1 cut(s)	499
PpsI	GAGTC	6 cut(s)	256, 445, 851, 864, 891, 1357
PpuMI	RGGWCCY	1 cut(s)	1436
PshAI	GACNNNNGTC	1 cut(s)	882
Psp124BI	GAGCTC	1 cut(s)	470
Psp5II	RGGWCCY	1 cut(s)	1436
PspEI	GGTNACC	2 cut(s)	828, 875
PspN4I	GGNNCC	5 cut(s)	127, 497, 658, 801, 955
PspPI	GGNCC	4 cut(s)	125, 781, 1110, 1436
PspPPI	RGGWCCY	1 cut(s)	1436
PstI	CTGCAG	2 cut(s)	626, 1450
PsuI	RGATCY	1 cut(s)	197
RseI	CAYNNNNRTG	2 cut(s)	510, 793
SacI	GAGCTC	1 cut(s)	470
SaqAI	TTAA	2 cut(s)	114, 1202
SatI	GCNGC	7 cut(s)	537, 540, 595, 720, 750, 1158, 1449
Sau3AI	GATC	5 cut(s)	197, 269, 379, 544, 930
Sau96I	GGNCC	4 cut(s)	125, 781, 1110, 1436
SchI	GAGTC	6 cut(s)	256, 445, 852, 865, 892, 1357
ScrFI	CCNGG	5 cut(s)	267, 599, 654, 754, 862
SduI	GDGCHC	3 cut(s)	470, 804, 1353
SfaNI	GCATC	3 cut(s)	395, 719, 996
SfcI	CTRYAG	2 cut(s)	622, 1446
SfoI	GGCGCC	1 cut(s)	497
SgrAI	CRCCGGYG	1 cut(s)	498
SinI	GGWCC	1 cut(s)	1436
SmiMI	CAYNNNNRTG	2 cut(s)	510, 793
SmlI	CTYRAG	4 cut(s)	1008, 1035, 1065, 1354
SmoI	CTYRAG	4 cut(s)	1008, 1035, 1065, 1354
Sse9I	AATT	8 cut(s)	118, 617, 1081, 1175, 1287, 1380, 1411, 1423
SspDI	GGCGCC	1 cut(s)	495
SspMI	CTAG	3 cut(s)	81, 638, 687
SstI	GAGCTC	1 cut(s)	470
StyD4I	CCNGG	5 cut(s)	265, 597, 652, 752, 860
StyI	CCWWGG	1 cut(s)	305
TaaI	ACNGT	2 cut(s)	346, 512
TaqI	TCGA	1 cut(s)	72
TasI	AATT	8 cut(s)	118, 617, 1081, 1175, 1287, 1380, 1411, 1423
TauI	GCSGC	4 cut(s)	539, 597, 722, 752
TfiI	GAWTC	3 cut(s)	587, 822, 1105
Tru1I	TTAA	2 cut(s)	114, 1202
Tru9I	TTAA	2 cut(s)	114, 1202
TscAI	CASTG	6 cut(s)	370, 517, 877, 1060, 1156, 1425
TseFI	GTSAC	7 cut(s)	340, 448, 731, 828, 848, 875, 1211
TseI	GCWGC	3 cut(s)	539, 1157, 1448
Tsp45I	GTSAC	7 cut(s)	340, 448, 731, 828, 848, 875, 1211
TspDTI	ATGAA	2 cut(s)	546, 931
TspGWI	ACGGA	1 cut(s)	554
TspRI	CASTG	6 cut(s)	370, 517, 877, 1060, 1156, 1425
Van91I	CCANNNNNTGG	1 cut(s)	1151
VneI	GTGCAC	1 cut(s)	1349
VpaK11BI	GGWCC	1 cut(s)	1436
XapI	RAATTY	5 cut(s)	118, 617, 1081, 1175, 1411
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1299
XspI	CTAG	3 cut(s)	81, 638, 687

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.