Rorug05G0426100
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
59203844 .. 59205947
2104 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0426100.1

Sequence Viewer

Length: 1377 bp
ATGAGTTCGCTTATGCCGAAGCACCAAACAAGAAACAAAGATAGGATCAGTGCATTACCAGATGCACTTATTTGTCACATACTTTCCTCACTTCGTACCGTCGAGGTTTTAGAGACTATGGTTTTGTCTAAAAGATGGAAGAACATGTGGGCTTCCGTTTCCAATTTAGACTTCGACTTCAAAAGGGATTTTGGAAGAGTAGAGGATATTCAAGTTTTTATAATGTTTGTGAGTCGTGTACTCTACATGCGTGACTCATCAGACATAAAAAAGTTTCGTCTTGTAATTTCCTCCATTGGGTATTTTCGTGTTTTTGACGATTGGATGTACACTGCAGTTAGGCGTAATGTTGTTGAGCTTGATCTTCATATGTTGATTGGATATTTCCAGTATGTTGAGTTGCCTGAGTGTATTTTTATGTGCAAAACCCTAAGGGTTTTGAAACTGAATCTGGGGCGGTTTGCCCACGCCGAACCTCCCACATCTGGCTCTTGTTTCCCAAGTCTTAAGTTCCTCCATGTTACGGTTTGTAATCCTGTCATGACAACAATGCAGAATCTTTTCTCTCGCTGCCCTGTACTTGAAGATTTGACAATAGATGGAACCATTGATGTGTATTTGTTTGGGATCGATGGCAATTTCAAGATCTCTGCTCCAGAACTGAAGATGTTGAGAACAAGTTTGGAAATTAATCAGGATCCTATCGATGTTTACATAAATTCCCCAAAGCTTGAGACCATTGATCTAAAGAGGGTTGGTTTGACTAATTTTTTTCTTGTGGGGAGTGCAAAATCCCTGGTCAATGCCAATATTGCGTTCAGAGAACGGTCTGAATTTGAAGTGGCATCCAACTGTGCAATGGCGCTTCTGGATCAAGTTTCTAATGTTAAATCTCTATCTCTTTCGGCTCATTCCATGGAGAATTGGCATCTCCCGGAATTTGGTAATGTCAACCAATTGACGCTAGTTTTTGGAGATTGCAGATGCTGGGAATTGCTACCTAGGTTTCTCAAGAATGCACCTAATCTCGAAGATTTTTTCTTAGAAGATAGAACTGAAGGTTGCGAGGAATTTTCAGATCTGCACTGGAGTCTACCGGAGGATATGCCTATTTGTTTCTCTTCACACCTGAAGACTATCTCCTTGAAGGGATTCAAGGGAAGGCGGGTTGAGATGGAAATGGTAAAGTTTCTGTTGAACAATGGTCATCTGTTGAAAAAAATGACTATTGTTACAGGCCCTCGTCTTTCATATTCGAAACAGGAGGAGTTATATAAGGAGTTTATGATGTTCCACAGGGCAACAACTTGTCATATCGAGTTTGTATATGCAGATGCAAGTTTAGGTTCTACTAGCAGAATTCAAGCTGTAATATGA

Protein Analysis

458

Amino Acids

52.76

Weight (kDa)

6.65

Isoelectric Point (pI)

41.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 16 - 55 2.7e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 84 - 415 7.3e-12 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 106 - 203 2.6e-12 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 366 - 410 1.9e-14 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 221
AccI GTMKAC 1 cut(s) 1093
AciI CCGC 2 cut(s) 457, 1165
AclWI GGATC 5 cut(s) 53, 635, 692, 705, 879
AcsI RAATTY 5 cut(s) 718, 833, 938, 1070, 1359
AcuI CTGAAG 3 cut(s) 683, 1077, 1151
AfaI GTAC 4 cut(s) 97, 240, 329, 579
AfiI CCNNNNNNNGG 4 cut(s) 297, 485, 523, 941
AflII CTTAAG 1 cut(s) 506
AflIII ACRYGT 1 cut(s) 144
AjnI CCWGG 1 cut(s) 795
AjuI GAANNNNNNNTTGG 4 cut(s) 155, 187, 800, 832
AluBI AGCT 3 cut(s) 358, 730, 1367
AluI AGCT 3 cut(s) 358, 730, 1367
Alw26I GTCTC 2 cut(s) 107, 728
AlwI GGATC 5 cut(s) 53, 635, 692, 705, 879
AlwNI CAGNNNCTG 1 cut(s) 987
AoxI GGCC 1 cut(s) 1237
ApeKI GCWGC 1 cut(s) 570
ApoI RAATTY 5 cut(s) 718, 833, 938, 1070, 1359
ArsI GACNNNNNNTTYG 2 cut(s) 106, 138
AseI ATTAAT 1 cut(s) 690
Asp700I GAANNNNTTC 2 cut(s) 560, 1151
AspA2I CCTAGG 1 cut(s) 1001
AspLEI GCGC 1 cut(s) 865
AspS9I GGNCC 1 cut(s) 1238
AsuC2I CCSGG 1 cut(s) 935
AsuII TTCGAA 1 cut(s) 1256
AvrII CCTAGG 1 cut(s) 1001
AxyI CCTNAGG 1 cut(s) 431
BamHI GGATCC 1 cut(s) 697
BbsI GAAGAC 1 cut(s) 1139
BbvI GCAGC 1 cut(s) 557
BccI CCATC 4 cut(s) 129, 593, 626, 1168
BciT130I CCWGG 1 cut(s) 797
BcnI CCSGG 1 cut(s) 935
BcoDI GTCTC 2 cut(s) 107, 728
BfaI CTAG 3 cut(s) 965, 1002, 1353
BfmI CTRYAG 1 cut(s) 333
BfoI RGCGCY 1 cut(s) 866
BfrI CTTAAG 1 cut(s) 506
BglII AGATCT 2 cut(s) 645, 1078
BisI GCNGC 1 cut(s) 571
BlnI CCTAGG 1 cut(s) 1001
BlsI GCNGC 1 cut(s) 572
Bme1390I CCNGG 2 cut(s) 797, 935
BmgT120I GGNCC 1 cut(s) 1238
BmiI GGNNCC 2 cut(s) 604, 699
BmrFI CCNGG 2 cut(s) 797, 935
BmsI GCATC 5 cut(s) 52, 854, 937, 974, 1324
BpiI GAAGAC 1 cut(s) 1139
BpmI CTGGAG 2 cut(s) 639, 1108
Bpu14I TTCGAA 1 cut(s) 1256
BpuEI CTTGAG 2 cut(s) 752, 995
BpuMI CCSGG 1 cut(s) 935
Bsa29I ATCGAT 2 cut(s) 630, 705
BsaI GGTCTC 1 cut(s) 728
BsaJI CCNNGG 3 cut(s) 795, 915, 1001
BsaWI WCCGGW 1 cut(s) 1096
Bsc4I CCNNNNNNNGG 4 cut(s) 297, 485, 523, 941
Bse1I ACTGG 2 cut(s) 388, 1091
Bse21I CCTNAGG 1 cut(s) 431
Bse3DI GCAATG 1 cut(s) 864
BseBI CCWGG 1 cut(s) 797
BseCI ATCGAT 2 cut(s) 630, 705
BseDI CCNNGG 3 cut(s) 795, 915, 1001
BseGI GGATG 2 cut(s) 330, 845
BseLI CCNNNNNNNGG 4 cut(s) 297, 485, 523, 941
BseMI GCAATG 1 cut(s) 864
BseMII CTCAG 1 cut(s) 396
BseNI ACTGG 2 cut(s) 388, 1091
BseRI GAGGAG 1 cut(s) 1280
BseXI GCAGC 1 cut(s) 557
BseYI CCCAGC 1 cut(s) 987
BsgI GTGCAG 1 cut(s) 1067
BshFI GGCC 1 cut(s) 1239
BshVI ATCGAT 2 cut(s) 630, 705
BsiSI CCGG 2 cut(s) 935, 1097
BslI CCNNNNNNNGG 4 cut(s) 297, 485, 523, 941
BsmAI GTCTC 2 cut(s) 107, 728
BsmI GAATGC 1 cut(s) 1021
BsnI GGCC 1 cut(s) 1239
Bso31I GGTCTC 1 cut(s) 728
Bsp119I TTCGAA 1 cut(s) 1256
Bsp1407I TGTACA 1 cut(s) 327
Bsp143I GATC 8 cut(s) 45, 361, 627, 645, 697, 742, 871, 1078
Bsp19I CCATGG 1 cut(s) 915
BspACI CCGC 2 cut(s) 457, 1165
BspANI GGCC 1 cut(s) 1239
BspCNI CTCAG 1 cut(s) 397
BspDI ATCGAT 2 cut(s) 630, 705
BspHI TCATGA 1 cut(s) 540
BspLI GGNNCC 2 cut(s) 604, 699
BspMAI CTGCAG 1 cut(s) 337
BspPI GGATC 5 cut(s) 53, 635, 692, 705, 879
BspT104I TTCGAA 1 cut(s) 1256
BspTI CTTAAG 1 cut(s) 506
BspTNI GGTCTC 1 cut(s) 728
BsrDI GCAATG 1 cut(s) 864
BsrGI TGTACA 1 cut(s) 327
BsrI ACTGG 2 cut(s) 388, 1091
BssECI CCNNGG 3 cut(s) 795, 915, 1001
BssMI GATC 8 cut(s) 45, 361, 627, 645, 697, 742, 871, 1078
BssT1I CCWWGG 2 cut(s) 915, 1001
Bst2UI CCWGG 1 cut(s) 797
Bst4CI ACNGT 4 cut(s) 100, 526, 828, 854
Bst6I CTCTTC 2 cut(s) 190, 1126
BstAFI CTTAAG 1 cut(s) 506
BstAUI TGTACA 1 cut(s) 327
BstBI TTCGAA 1 cut(s) 1256
BstDEI CTNAG 3 cut(s) 405, 431, 1042
BstDSI CCRYGG 1 cut(s) 915
BstF5I GGATG 2 cut(s) 330, 845
BstH2I RGCGCY 1 cut(s) 866
BstHHI GCGC 1 cut(s) 865
BstKTI GATC 8 cut(s) 48, 364, 630, 648, 700, 745, 874, 1081
BstMAI GTCTC 2 cut(s) 107, 728
BstMBI GATC 8 cut(s) 45, 361, 627, 645, 697, 742, 871, 1078
BstMWI GCNNNNNNNGC 1 cut(s) 812
BstNI CCWGG 1 cut(s) 797
BstNSI RCATGY 2 cut(s) 148, 250
BstSCI CCNGG 2 cut(s) 795, 933
BstSFI CTRYAG 1 cut(s) 333
BstV1I GCAGC 1 cut(s) 557
BstV2I GAAGAC 1 cut(s) 1139
BstX2I RGATCY 3 cut(s) 645, 697, 1078
BstYI RGATCY 3 cut(s) 645, 697, 1078
Bsu15I ATCGAT 2 cut(s) 630, 705
Bsu36I CCTNAGG 1 cut(s) 431
BsuRI GGCC 1 cut(s) 1239
BsuTUI ATCGAT 2 cut(s) 630, 705
BtgI CCRYGG 1 cut(s) 915
BtsCI GGATG 2 cut(s) 330, 845
BtsI GCAGTG 1 cut(s) 330
BtsIMutI CAGTG 3 cut(s) 55, 330, 1084
CaiI CAGNNNCTG 1 cut(s) 987
CciI TCATGA 1 cut(s) 540
CfoI GCGC 1 cut(s) 865
Cfr13I GGNCC 1 cut(s) 1238
ClaI ATCGAT 2 cut(s) 630, 705
CseI GACGC 1 cut(s) 970
Csp6I GTAC 4 cut(s) 96, 239, 328, 578
CviAII CATG 5 cut(s) 145, 247, 518, 541, 916
CviJI RGCY 7 cut(s) 152, 358, 489, 730, 908, 1239, 1367
CviKI_1 RGCY 7 cut(s) 152, 358, 489, 730, 908, 1239, 1367
CviQI GTAC 4 cut(s) 96, 239, 328, 578
DdeI CTNAG 3 cut(s) 405, 431, 1042
DpnI GATC 8 cut(s) 47, 363, 629, 647, 699, 744, 873, 1080
DpnII GATC 8 cut(s) 45, 361, 627, 645, 697, 742, 871, 1078
Eam1104I CTCTTC 2 cut(s) 190, 1126
EarI CTCTTC 2 cut(s) 190, 1126
Eco130I CCWWGG 2 cut(s) 915, 1001
Eco31I GGTCTC 1 cut(s) 728
Eco57I CTGAAG 3 cut(s) 683, 1077, 1151
Eco81I CCTNAGG 1 cut(s) 431
EcoO109I RGGNCCY 1 cut(s) 1238
EcoRI GAATTC 1 cut(s) 1359
EcoRII CCWGG 1 cut(s) 795
EcoT14I CCWWGG 2 cut(s) 915, 1001
ErhI CCWWGG 2 cut(s) 915, 1001
FaeI CATG 5 cut(s) 148, 250, 521, 544, 919
FatI CATG 5 cut(s) 144, 246, 517, 540, 915
FauI CCCGC 1 cut(s) 1158
FauNDI CATATG 1 cut(s) 369
FblI GTMKAC 1 cut(s) 1093
Fnu4HI GCNGC 1 cut(s) 571
FokI GGATG 2 cut(s) 337, 832
Fsp4HI GCNGC 1 cut(s) 571
FspBI CTAG 3 cut(s) 965, 1002, 1353
GlaI GCGC 1 cut(s) 864
GluI GCNGC 1 cut(s) 571
GsaI CCCAGC 1 cut(s) 991
GsuI CTGGAG 2 cut(s) 639, 1108
HaeII RGCGCY 1 cut(s) 866
HaeIII GGCC 1 cut(s) 1239
HapII CCGG 2 cut(s) 935, 1097
HgaI GACGC 1 cut(s) 970
HhaI GCGC 1 cut(s) 865
Hin1II CATG 5 cut(s) 148, 250, 521, 544, 919
Hin6I GCGC 1 cut(s) 863
HinP1I GCGC 1 cut(s) 863
HincII GTYRAC 1 cut(s) 952
HindII GTYRAC 1 cut(s) 952
HindIII AAGCTT 1 cut(s) 728
HinfI GANTC 6 cut(s) 232, 254, 448, 556, 1090, 1152
HpaII CCGG 2 cut(s) 935, 1097
Hpy166II GTNNAC 5 cut(s) 239, 330, 712, 952, 1094
Hpy188I TCNGA 4 cut(s) 262, 821, 832, 1078
Hpy188III TCNNGA 7 cut(s) 541, 643, 656, 695, 869, 1012, 1028
Hpy8I GTNNAC 5 cut(s) 239, 330, 712, 952, 1094
Hpy99I CGWCG 1 cut(s) 104
HpyAV CCTTC 3 cut(s) 1052, 1141, 1155
HpyCH4III ACNGT 4 cut(s) 100, 526, 828, 854
HpyF10VI GCNNNNNNNGC 1 cut(s) 812
HpyF3I CTNAG 3 cut(s) 405, 431, 1042
Hsp92II CATG 5 cut(s) 148, 250, 521, 544, 919
HspAI GCGC 1 cut(s) 863
Kzo9I GATC 8 cut(s) 45, 361, 627, 645, 697, 742, 871, 1078
LmnI GCTCC 1 cut(s) 658
Lsp1109I GCAGC 1 cut(s) 557
LweI GCATC 5 cut(s) 52, 854, 937, 974, 1324
MaeI CTAG 3 cut(s) 965, 1002, 1353
MaeIII GTNAC 4 cut(s) 74, 251, 520, 1231
MalI GATC 8 cut(s) 47, 363, 629, 647, 699, 744, 873, 1080
MboI GATC 8 cut(s) 45, 361, 627, 645, 697, 742, 871, 1078
MboII GAAGA 9 cut(s) 151, 207, 356, 596, 676, 1043, 1058, 1113, 1144
MfeI CAATTG 1 cut(s) 956
MflI RGATCY 3 cut(s) 645, 697, 1078
MlyI GAGTC 3 cut(s) 241, 248, 1099
MmeI TCCRAC 1 cut(s) 873
MroXI GAANNNNTTC 2 cut(s) 560, 1151
MseI TTAA 3 cut(s) 507, 690, 888
MslI CAYNNNNRTG 1 cut(s) 611
MspCI CTTAAG 1 cut(s) 506
MspI CCGG 2 cut(s) 935, 1097
MspR9I CCNGG 2 cut(s) 797, 935
MunI CAATTG 1 cut(s) 956
Mva1269I GAATGC 1 cut(s) 1021
MvaI CCWGG 1 cut(s) 797
MwoI GCNNNNNNNGC 1 cut(s) 812
NciI CCSGG 1 cut(s) 935
NcoI CCATGG 1 cut(s) 915
NdeI CATATG 1 cut(s) 369
NdeII GATC 8 cut(s) 45, 361, 627, 645, 697, 742, 871, 1078
NlaIII CATG 5 cut(s) 148, 250, 521, 544, 919
NlaIV GGNNCC 2 cut(s) 604, 699
NmuCI GTSAC 2 cut(s) 74, 251
NspI RCATGY 2 cut(s) 148, 250
NspV TTCGAA 1 cut(s) 1256
PagI TCATGA 1 cut(s) 540
PciI ACATGT 1 cut(s) 144
PcsI WCGNNNNNNNCGW 1 cut(s) 14
PctI GAATGC 1 cut(s) 1021
PdmI GAANNNNTTC 2 cut(s) 560, 1151
PfeI GAWTC 3 cut(s) 448, 556, 1152
PfoI TCCNGGA 1 cut(s) 933
PkrI GCNGC 1 cut(s) 572
PleI GAGTC 3 cut(s) 240, 248, 1098
PpsI GAGTC 3 cut(s) 240, 248, 1098
PscI ACATGT 1 cut(s) 144
PshBI ATTAAT 1 cut(s) 690
PsiI TTATAA 1 cut(s) 221
Psp6I CCWGG 1 cut(s) 795
PspFI CCCAGC 1 cut(s) 987
PspGI CCWGG 1 cut(s) 795
PspN4I GGNNCC 2 cut(s) 604, 699
PspPI GGNCC 1 cut(s) 1238
PstI CTGCAG 1 cut(s) 337
PstNI CAGNNNCTG 1 cut(s) 987
PsuI RGATCY 3 cut(s) 645, 697, 1078
RsaI GTAC 4 cut(s) 97, 240, 329, 579
RsaNI GTAC 4 cut(s) 96, 239, 328, 578
RseI CAYNNNNRTG 1 cut(s) 611
SaqAI TTAA 3 cut(s) 507, 690, 888
SatI GCNGC 1 cut(s) 571
Sau3AI GATC 8 cut(s) 45, 361, 627, 645, 697, 742, 871, 1078
Sau96I GGNCC 1 cut(s) 1238
SchI GAGTC 3 cut(s) 241, 248, 1099
ScrFI CCNGG 2 cut(s) 797, 935
SfaNI GCATC 5 cut(s) 52, 854, 937, 974, 1324
SfcI CTRYAG 1 cut(s) 333
SfuI TTCGAA 1 cut(s) 1256
SmiMI CAYNNNNRTG 1 cut(s) 611
SmlI CTYRAG 3 cut(s) 506, 731, 1010
SmoI CTYRAG 3 cut(s) 506, 731, 1010
SsiI CCGC 2 cut(s) 457, 1165
SspI AATATT 1 cut(s) 811
SspMI CTAG 3 cut(s) 965, 1002, 1353
StyD4I CCNGG 2 cut(s) 795, 933
StyI CCWWGG 2 cut(s) 915, 1001
TaaI ACNGT 4 cut(s) 100, 526, 828, 854
TaqI TCGA 7 cut(s) 102, 174, 630, 705, 1029, 1256, 1317
TatI WGTACW 3 cut(s) 238, 327, 577
TfiI GAWTC 3 cut(s) 448, 556, 1152
Tru1I TTAA 3 cut(s) 507, 690, 888
Tru9I TTAA 3 cut(s) 507, 690, 888
TscAI CASTG 3 cut(s) 55, 337, 1091
TseFI GTSAC 2 cut(s) 74, 251
TseI GCWGC 1 cut(s) 570
Tsp45I GTSAC 2 cut(s) 74, 251
TspDTI ATGAA 2 cut(s) 356, 1239
TspGWI ACGGA 1 cut(s) 145
TspRI CASTG 3 cut(s) 55, 337, 1091
Vha464I CTTAAG 1 cut(s) 506
VspI ATTAAT 1 cut(s) 690
XapI RAATTY 5 cut(s) 718, 833, 938, 1070, 1359
XceI RCATGY 2 cut(s) 148, 250
XcmI CCANNNNNNNNNTGG 1 cut(s) 856
XmaJI CCTAGG 1 cut(s) 1001
XmiI GTMKAC 1 cut(s) 1093
XmnI GAANNNNTTC 2 cut(s) 560, 1151
XspI CTAG 3 cut(s) 965, 1002, 1353
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.