Rorug05G0089700
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
7763287 .. 7770512
7226 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0089700.1

Sequence Viewer

Length: 3084 bp
ATGCAAAAGAAGAAAATGGCATTTAGCGTTTTTCCAAAAAGCATCATGACTATGGTCATAATGGTTCTCTGCTTCATCTGCATAAACTCAGTCAGATCAGTTGAAGCACAATCCCCACGCCTTCCTGTTCAAGAAGTGGAAGCAATGAGAGAAATTGCTTCACAATTGGGAAAAAAAGACTGGAACTTCGACGTAGACCCATGCCTCAACGACACCAGCTGGGCTACCCCAATATCTGATCGTTACTCGCTATACACCAACATTGTCTCTTGCAACTGTTCCTACGTCCCTGATGGTGTATGCCACGTCACCAGTATTGTTCTTACAGGGCAAGATCTTGCTGGTGTACTTCCACCATCTATTGCAAAGTTACCCTGCCTTACACAAGTTTCTTTCACGAGGAACTACCTCAGTGGTAACATACCGCTTGAATGGGCTTCTACAAAGTTGCAAAACCTGTCCCTTACTGTGAACAACTTATCAGGAACAATCCCTGCATACTTGGGGAACATTACTACTCTAAAACTACTGTTCCTAGACAGTAACCAATTTTATGGAACTGTTCCTCCTGAGCTTGGGAAGCTGGTTAACTTGGAGCTTCTCCTACTCGGTCAAAACAATCTCTCAGGAGAGTTGCCATTGGATCTCTCTAATCTAAATAAATTAAAAGTACTTAAGATTGGCAGTAACAACTTCAATGGAACAATACCTGATTTCTTTGAAAGTTGGAGTCAGCTTCAGAGTTTAGAGATCCAAGCTAGCGGTCTCCAAGGGCCCATTCCGCCTAGCATTTATTCCTTGAATAAATTAGAAATATTAAGGATCAGTGACTTGAGTGGATACAGTTCATCATTTCCAAACTTGAGAAATATGACACTTATGCGCGTTTTAATGCTAAGGAGCTGTAATCTAGTTGGACCTATCCCTGATTACATATCGAAACTGACAGCATTACGTATATTAGATCTCAGCTTCAACAGATTGGAAGGAAGTATTCCTGACTTTGGAATAGGCATATTGGACAACTTGTGTCTGACACATAACGCCCTCACTGGGTCTATTCCAGAGTTATCTGCACCTCTTCCAGATTGGGTCAAGAGAAATCGCAATAACAGTAACTACTACATGGATATTTCTTACAATGAATTTCCTGAGAGCTCTGAGTTACCTTGTACAGAAAACCTGAACTTGTTCAAAAGCTTTTCTGCACAAGACATCTCATTATCTGGAGGGTGCCTGAAGAGATATCCATGTCGAGAAGATCGGCTTTCTTTGCATATAAACTGTGGTGGAAGAAACACCACAGTTGGAGGAATCAACTTTGAAGGTGATCAAGACCGAGGAGGTCCATCAGCGTTCGTTCCTGCTGGAGCTAACTGGGGATTTAGCAACACTGGACATTTCTGGGATACTGAATTCGGTGAAGACTACATAGCAGATAATACATCTATACTCCGAATGAGCAACTCTGAGTTGTACACAAATGCACGCCTCTCTCCTCTTTCTCTTACGTATTATGCACGCTGCTTGGCAAATGGAAGTTATACTGTGAGACTTCACTTTTCAGAGATAATAATTAGAGGAAATAGATCTTTCCACAGTCTTGGAATACGGATATTTGATGTTTATATTCAGGAGAAACTGATGTTGAATGATTTTAACATTGAAGTGGAAGCACAAGGGGTTGATAAAGCAGTCATAAAGGAATTTAAAGCAGTTGAGGTGAAGGATAAAACCTTAGAGATCAGATTTCATTGGTCTGGCAAAGGGACAACAGCTTCCCCGAGAAGAGGAGTATATGGTCCTCTTATATCAGCTATCTCTATAGAGTTTGAGTCCACTCATTCTGGTCTCCGAAAAGAGTCCACTCCTCGTGATAGCAAAAAGAAGGTATTTACAGTGGCTGGAGCTTCAGTTTTGTGTCTTGTTTTCTTGATTTCAGGCATTCTTTGGTGGAATGGATGTCTGGATAGCAAGACATCCAGGGAAAAAGCTTTGAGAAGACTGGATTTGCAAACTGGCTTTTTCACCTTCAAGCAAATTAGAGCTGCCACTAACAGCTTTGATCCTGTAAACAAAATTGGGGAGGGTGGTTTTGGCTCTGTCTACAAGGGTATATTATTGGATGGTACTATAATTGCGGTCAAGCAACTATCTTCAAAATCAAAGCAAGGAAATCGTGAATTCGTGAACGAAATAGGCATGATTTCTGGTTTGCAACATCCAAATCTTGTTAGATTGTATGGATGTTGTATTGAAGCAAATGAATTACTGTTGGTGTATGAATATATGGAAAACAATAGTCTTGCAGGCGCTTTATTTGGCCCAGAGGAAAGTCCACTCAAATTGGACTGGCCTACAAGGCAGAAAATATGCCTGGGCATAGCAAAAGGTCTGGCTTTTCTGCATGAGGAGTCAGCGTTGAAGGTTGTACATAGAGACATCAAAACTACAAATGTATTACTGGACAAAGATCTTAATGCTAAGATCTCAGACTTTGGTCTGGCAAAGCTCGATGAAGAAGAGAACACCCACATTAGCACAAGAGTTGCTGGAACTATAGGATACATGGCGCCAGAATACGCACTATGGGGTTATTTAACCTTCAAAGCAGATGTCTTTAGTTTTGGTATTGTTGCATTGGAAATAGTTGCTGGAAAGAACAACATGAAATTTCGACCAAATGTGGATTTTGTAGGCCTTGTGGATTGGGCTCTTGTTTTACAACAAAAAGAGAGTTTAGTGGAGCTTGTGGATCCAAGGTTAGGGTCAGATTTCAGTAACGAAGAGGCAGTTAGAATGGTTAAAGTAGCTCTGCTATGCATCAATCCGGTAGCTGCACTTAGGCCTACCATGTCTGCAGTCGTGAGTATGCTTGAAGGGCGAACCCCTGTCGATGAATTGATTATGGATCCAAATATATATAGTGAAGAAATGAGGTTAACAGCCTTGAGAAATCCATTTGAGCAGATTGCACAAGAGAGAGCAGGTGGAAGTCAAAGCTTGATACATTCGTCCGATACATCATGGAATGATTCTTCTGCTCCTACTATATCTTCAGATCTCTATATAATCAATCCTTAG

Protein Analysis

1027

Amino Acids

113.83

Weight (kDa)

5.81

Isoelectric Point (pI)

37.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 163 - 251 6.1e-06 Leucine-rich repeat region
Malectin PF11721 424 - 607 9e-36 Malectin domain
Pkinase PF00069 691 - 891 6.7e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 692 - 957 2.6e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2978
Acc36I ACCTGC 1 cut(s) 2978
AccB1I GGYRCC 2 cut(s) 1233, 2572
AccI GTMKAC 2 cut(s) 195, 2106
AccII CGCG 1 cut(s) 885
AciI CCGC 4 cut(s) 425, 762, 782, 2141
AclWI GGATC 8 cut(s) 651, 745, 830, 2060, 2750, 2763, 2906, 2919
AcsI RAATTY 5 cut(s) 1145, 1415, 1706, 2183, 2672
AcuI CTGAAG 4 cut(s) 722, 1259, 1896, 3042
AcyI GRCGYC 1 cut(s) 2573
AfaI GTAC 6 cut(s) 348, 672, 1174, 1478, 2131, 2433
AfiI CCNNNNNNNGG 5 cut(s) 575, 1004, 1053, 1790, 2765
AflII CTTAAG 1 cut(s) 674
AjiI CACGTC 1 cut(s) 307
AjnI CCWGG 2 cut(s) 1982, 2376
AjuI GAANNNNNNNTTGG 2 cut(s) 762, 794
AloI GAACNNNNNNTCC 2 cut(s) 550, 582
Alw21I GWGCWC 1 cut(s) 1160
Alw26I GTCTC 5 cut(s) 271, 770, 1546, 1856, 2433
AlwI GGATC 8 cut(s) 651, 745, 830, 2060, 2750, 2763, 2906, 2919
AlwNI CAGNNNCTG 1 cut(s) 1904
Ama87I CYCGRG 1 cut(s) 1783
AoxI GGCC 5 cut(s) 773, 2323, 2354, 2698, 2846
ApaI GGGCCC 1 cut(s) 777
ApeKI GCWGC 3 cut(s) 1524, 2048, 2837
ApoI RAATTY 5 cut(s) 1145, 1415, 1706, 2183, 2672
ArsI GACNNNNNNTTYG 4 cut(s) 170, 202, 2601, 2633
Asp700I GAANNNNTTC 1 cut(s) 1190
AspLEI GCGC 3 cut(s) 885, 2315, 2575
AspS9I GGNCC 6 cut(s) 773, 774, 917, 1346, 1802, 2324
AsuHPI GGTGA 5 cut(s) 301, 1340, 1433, 1735, 2020
AsuNHI GCTAGC 1 cut(s) 758
AvaI CYCGRG 1 cut(s) 1783
AvaII GGWCC 3 cut(s) 917, 1346, 1802
BaeGI GKGCMC 1 cut(s) 777
BaeI ACNNNNGTAYC 2 cut(s) 2999, 3032
BamHI GGATCC 2 cut(s) 2755, 2911
BanI GGYRCC 2 cut(s) 1233, 2572
BanII GRGCYC 3 cut(s) 777, 1160, 2716
BauI CACGAG 2 cut(s) 397, 1872
BbsI GAAGAC 2 cut(s) 1431, 2008
Bbv12I GWGCWC 1 cut(s) 1160
BbvI GCAGC 3 cut(s) 1511, 2035, 2824
BccI CCATC 4 cut(s) 287, 364, 1357, 2120
BcgI CGANNNNNNTGC 2 cut(s) 2159, 2193
BciT130I CCWGG 2 cut(s) 1984, 2378
BciVI GTATCC 3 cut(s) 833, 1402, 2558
BclI TGATCA 1 cut(s) 1330
BcoDI GTCTC 5 cut(s) 271, 770, 1546, 1856, 2433
BfaI CTAG 4 cut(s) 536, 759, 786, 911
BfmI CTRYAG 3 cut(s) 1824, 2559, 2859
BfoI RGCGCY 2 cut(s) 2316, 2576
BfrI CTTAAG 1 cut(s) 674
BfuAI ACCTGC 1 cut(s) 2978
BfuI GTATCC 3 cut(s) 833, 1402, 2558
BglI GCCNNNNNGGC 1 cut(s) 2362
BglII AGATCT 6 cut(s) 334, 964, 1589, 2473, 2487, 3061
BisI GCNGC 3 cut(s) 1525, 2049, 2838
BlsI GCNGC 3 cut(s) 1526, 2050, 2839
BmcAI AGTACT 1 cut(s) 672
Bme1390I CCNGG 2 cut(s) 1984, 2378
Bme18I GGWCC 3 cut(s) 917, 1346, 1802
BmeT110I CYCGRG 1 cut(s) 1783
BmgBI CACGTC 1 cut(s) 307
BmgT120I GGNCC 6 cut(s) 773, 774, 917, 1346, 1802, 2324
BmiI GGNNCC 5 cut(s) 775, 1235, 2574, 2757, 2913
BmrFI CCNGG 2 cut(s) 1984, 2378
BmrI ACTGGG 2 cut(s) 1062, 1387
BmsI GCATC 2 cut(s) 51, 2832
BmtI GCTAGC 1 cut(s) 762
BmuI ACTGGG 2 cut(s) 1062, 1387
BoxI GACNNNNGTC 2 cut(s) 53, 2499
BpiI GAAGAC 2 cut(s) 1431, 2008
BpmI CTGGAG 3 cut(s) 1248, 1389, 1926
Bpu10I CCTNAGC 2 cut(s) 570, 896
BpuEI CTTGAG 3 cut(s) 853, 883, 2971
BsaAI YACGTR 2 cut(s) 956, 1512
BsaHI GRCGYC 1 cut(s) 2573
BsaI GGTCTC 2 cut(s) 770, 1856
BsaJI CCNNGG 5 cut(s) 769, 1339, 1983, 2377, 2759
BsaWI WCCGGW 1 cut(s) 2830
BsaXI ACNNNNNCTCC 6 cut(s) 550, 580, 1899, 1929, 2405, 2435
Bsc4I CCNNNNNNNGG 5 cut(s) 575, 1004, 1053, 1790, 2765
Bse1I ACTGG 9 cut(s) 185, 312, 1057, 1382, 1399, 2010, 2023, 2357, 2469
Bse3DI GCAATG 1 cut(s) 150
BseBI CCWGG 2 cut(s) 1984, 2378
BseDI CCNNGG 5 cut(s) 769, 1339, 1983, 2377, 2759
BseGI GGATG 5 cut(s) 1967, 1979, 2131, 2221, 2252
BseLI CCNNNNNNNGG 5 cut(s) 575, 1004, 1053, 1790, 2765
BseMI GCAATG 1 cut(s) 150
BseMII CTCAG 9 cut(s) 102, 424, 561, 639, 982, 1143, 1152, 1461, 2505
BseNI ACTGG 9 cut(s) 185, 312, 1057, 1382, 1399, 2010, 2023, 2357, 2469
BseRI GAGGAG 5 cut(s) 1356, 1488, 1806, 1860, 2426
BseSI GKGCMC 1 cut(s) 777
BseXI GCAGC 3 cut(s) 1511, 2035, 2824
BseYI CCCAGC 1 cut(s) 219
BsgI GTGCAG 3 cut(s) 1059, 1191, 2823
Bsh1236I CGCG 1 cut(s) 885
BshFI GGCC 5 cut(s) 775, 2325, 2356, 2700, 2848
BshNI GGYRCC 2 cut(s) 1233, 2572
BsiHKAI GWGCWC 1 cut(s) 1160
BsiHKCI CYCGRG 1 cut(s) 1783
BsiSI CCGG 1 cut(s) 2831
BslFI GGGAC 3 cut(s) 272, 445, 1783
BslI CCNNNNNNNGG 5 cut(s) 575, 1004, 1053, 1790, 2765
BsmAI GTCTC 5 cut(s) 271, 770, 1546, 1856, 2433
BsmFI GGGAC 3 cut(s) 272, 445, 1783
BsmI GAATGC 1 cut(s) 1944
BsnI GGCC 5 cut(s) 775, 2325, 2356, 2700, 2848
Bso31I GGTCTC 2 cut(s) 770, 1856
BsoBI CYCGRG 1 cut(s) 1783
Bsp120I GGGCCC 1 cut(s) 773
Bsp1286I GDGCHC 3 cut(s) 777, 1160, 2716
Bsp1407I TGTACA 3 cut(s) 1172, 1476, 2431
BspACI CCGC 4 cut(s) 425, 762, 782, 2141
BspANI GGCC 5 cut(s) 775, 2325, 2356, 2700, 2848
BspCNI CTCAG 9 cut(s) 101, 423, 562, 638, 981, 1144, 1153, 1462, 2504
BspFNI CGCG 1 cut(s) 885
BspHI TCATGA 1 cut(s) 45
BspLI GGNNCC 5 cut(s) 775, 1235, 2574, 2757, 2913
BspMAI CTGCAG 1 cut(s) 2863
BspMI ACCTGC 1 cut(s) 2978
BspOI GCTAGC 1 cut(s) 762
BspPI GGATC 8 cut(s) 651, 745, 830, 2060, 2750, 2763, 2906, 2919
BspT107I GGYRCC 2 cut(s) 1233, 2572
BspTI CTTAAG 1 cut(s) 674
BspTNI GGTCTC 2 cut(s) 770, 1856
BsrDI GCAATG 1 cut(s) 150
BsrGI TGTACA 3 cut(s) 1172, 1476, 2431
BsrI ACTGG 9 cut(s) 185, 312, 1057, 1382, 1399, 2010, 2023, 2357, 2469
BssECI CCNNGG 5 cut(s) 769, 1339, 1983, 2377, 2759
BssNI GRCGYC 1 cut(s) 2573
BssSI CACGAG 2 cut(s) 397, 1872
BssT1I CCWWGG 2 cut(s) 769, 2759
Bst2BI CACGAG 2 cut(s) 397, 1872
Bst2UI CCWGG 2 cut(s) 1984, 2378
Bst6I CTCTTC 5 cut(s) 1086, 1235, 1783, 2517, 2781
BstACI GRCGYC 1 cut(s) 2573
BstAFI CTTAAG 1 cut(s) 674
BstAUI TGTACA 3 cut(s) 1172, 1476, 2431
BstBAI YACGTR 2 cut(s) 956, 1512
BstC8I GCNNGC 4 cut(s) 760, 1489, 1522, 2311
BstF5I GGATG 5 cut(s) 1967, 1979, 2131, 2221, 2252
BstFNI CGCG 1 cut(s) 885
BstH2I RGCGCY 2 cut(s) 2316, 2576
BstHHI GCGC 3 cut(s) 885, 2315, 2575
BstMAI GTCTC 5 cut(s) 271, 770, 1546, 1856, 2433
BstMWI GCNNNNNNNGC 6 cut(s) 78, 580, 781, 1273, 2362, 2881
BstNI CCWGG 2 cut(s) 1984, 2378
BstPAI GACNNNNGTC 2 cut(s) 53, 2499
BstSCI CCNGG 2 cut(s) 1982, 2376
BstSFI CTRYAG 3 cut(s) 1824, 2559, 2859
BstSLI GKGCMC 1 cut(s) 777
BstSNI TACGTA 2 cut(s) 956, 1512
BstUI CGCG 1 cut(s) 885
BstV1I GCAGC 3 cut(s) 1511, 2035, 2824
BstV2I GAAGAC 2 cut(s) 1431, 2008
BstXI CCANNNNNNTGG 2 cut(s) 554, 1604
BsuI GTATCC 3 cut(s) 833, 1402, 2558
BsuRI GGCC 5 cut(s) 775, 2325, 2356, 2700, 2848
BtrI CACGTC 1 cut(s) 307
BtsCI GGATG 5 cut(s) 1967, 1979, 2131, 2221, 2252
BtsIMutI CAGTG 5 cut(s) 418, 832, 1050, 1392, 1905
BveI ACCTGC 1 cut(s) 2978
Cac8I GCNNGC 4 cut(s) 760, 1489, 1522, 2311
CaiI CAGNNNCTG 1 cut(s) 1904
CciI TCATGA 1 cut(s) 45
CfoI GCGC 3 cut(s) 885, 2315, 2575
Cfr13I GGNCC 6 cut(s) 773, 774, 917, 1346, 1802, 2324
Csp6I GTAC 6 cut(s) 347, 671, 1173, 1477, 2130, 2432
CspCI CAANNNNNGTGG 2 cut(s) 2328, 2363
CviQI GTAC 6 cut(s) 347, 671, 1173, 1477, 2130, 2432
DinI GGCGCC 1 cut(s) 2574
DraI TTTAAA 1 cut(s) 1711
Eam1104I CTCTTC 5 cut(s) 1086, 1235, 1783, 2517, 2781
EarI CTCTTC 5 cut(s) 1086, 1235, 1783, 2517, 2781
EciI GGCGGA 1 cut(s) 771
Ecl136II GAGCTC 1 cut(s) 1158
Eco105I TACGTA 2 cut(s) 956, 1512
Eco130I CCWWGG 2 cut(s) 769, 2759
Eco147I AGGCCT 2 cut(s) 2700, 2848
Eco24I GRGCYC 3 cut(s) 777, 1160, 2716
Eco31I GGTCTC 2 cut(s) 770, 1856
Eco32I GATATC 1 cut(s) 1247
Eco47I GGWCC 3 cut(s) 917, 1346, 1802
Eco53kI GAGCTC 1 cut(s) 1158
Eco57I CTGAAG 4 cut(s) 722, 1259, 1896, 3042
Eco88I CYCGRG 1 cut(s) 1783
EcoICRI GAGCTC 1 cut(s) 1158
EcoO109I RGGNCCY 1 cut(s) 773
EcoRI GAATTC 2 cut(s) 1415, 2183
EcoRII CCWGG 2 cut(s) 1982, 2376
EcoRV GATATC 1 cut(s) 1247
EcoT14I CCWWGG 2 cut(s) 769, 2759
EcoT22I ATGCAT 1 cut(s) 2825
EcoT38I GRGCYC 3 cut(s) 777, 1160, 2716
EgeI GGCGCC 1 cut(s) 2574
EheI GGCGCC 1 cut(s) 2574
ErhI CCWWGG 2 cut(s) 769, 2759
FalI AAGNNNNNCTT 2 cut(s) 1251, 1283
FaqI GGGAC 3 cut(s) 272, 445, 1783
FbaI TGATCA 1 cut(s) 1330
FblI GTMKAC 2 cut(s) 195, 2106
Fnu4HI GCNGC 3 cut(s) 1525, 2049, 2838
FokI GGATG 5 cut(s) 1966, 1974, 2138, 2208, 2259
FriOI GRGCYC 3 cut(s) 777, 1160, 2716
Fsp4HI GCNGC 3 cut(s) 1525, 2049, 2838
FspBI CTAG 4 cut(s) 536, 759, 786, 911
GlaI GCGC 3 cut(s) 884, 2314, 2574
GluI GCNGC 3 cut(s) 1525, 2049, 2838
GsaI CCCAGC 1 cut(s) 223
GsuI CTGGAG 3 cut(s) 1248, 1389, 1926
HaeII RGCGCY 2 cut(s) 2316, 2576
HaeIII GGCC 5 cut(s) 775, 2325, 2356, 2700, 2848
HapII CCGG 1 cut(s) 2831
HhaI GCGC 3 cut(s) 885, 2315, 2575
Hin1I GRCGYC 1 cut(s) 2573
Hin6I GCGC 3 cut(s) 883, 2313, 2573
HinP1I GCGC 3 cut(s) 883, 2313, 2573
HincII GTYRAC 2 cut(s) 589, 2943
HindII GTYRAC 2 cut(s) 589, 2943
HindIII AAGCTT 3 cut(s) 1198, 1992, 3001
HinfI GANTC 6 cut(s) 730, 1314, 1835, 1862, 2414, 3035
HpaI GTTAAC 2 cut(s) 589, 2943
HpaII CCGG 1 cut(s) 2831
HphI GGTGA 5 cut(s) 301, 1340, 1433, 1735, 2020
Hpy99I CGWCG 1 cut(s) 194
HpyAV CCTTC 9 cut(s) 131, 980, 1319, 1720, 1882, 2041, 2419, 2614, 2873
HpyCH4IV ACGT 5 cut(s) 192, 285, 306, 955, 1511
HpyF10VI GCNNNNNNNGC 6 cut(s) 78, 580, 781, 1273, 2362, 2881
HpySE526I ACGT 5 cut(s) 192, 285, 306, 955, 1511
Hsp92I GRCGYC 1 cut(s) 2573
HspAI GCGC 3 cut(s) 883, 2313, 2573
KasI GGCGCC 1 cut(s) 2572
Ksp22I TGATCA 1 cut(s) 1330
KspAI GTTAAC 2 cut(s) 589, 2943
LmnI GCTCC 6 cut(s) 595, 900, 1370, 1907, 2746, 3049
Lsp1109I GCAGC 3 cut(s) 1511, 2035, 2824
LweI GCATC 2 cut(s) 51, 2832
MaeI CTAG 4 cut(s) 536, 759, 786, 911
MaeII ACGT 5 cut(s) 192, 285, 306, 955, 1511
MfeI CAATTG 1 cut(s) 164
MhlI GDGCHC 3 cut(s) 777, 1160, 2716
Mly113I GGCGCC 1 cut(s) 2573
MlyI GAGTC 4 cut(s) 739, 1844, 1871, 2423
MmeI TCCRAC 3 cut(s) 707, 895, 1288
Mph1103I ATGCAT 1 cut(s) 2825
MroXI GAANNNNTTC 1 cut(s) 1190
MslI CAYNNNNRTG 2 cut(s) 50, 1667
MspA1I CMGCKG 1 cut(s) 219
MspCI CTTAAG 1 cut(s) 674
MspI CCGG 1 cut(s) 2831
MspR9I CCNGG 2 cut(s) 1984, 2378
MunI CAATTG 1 cut(s) 164
Mva1269I GAATGC 1 cut(s) 1944
MvaI CCWGG 2 cut(s) 1984, 2378
MvnI CGCG 1 cut(s) 885
MwoI GCNNNNNNNGC 6 cut(s) 78, 580, 781, 1273, 2362, 2881
NarI GGCGCC 1 cut(s) 2573
NheI GCTAGC 1 cut(s) 758
NlaIV GGNNCC 5 cut(s) 775, 1235, 2574, 2757, 2913
NmuCI GTSAC 2 cut(s) 307, 827
NsiI ATGCAT 1 cut(s) 2825
PagI TCATGA 1 cut(s) 45
PaqCI CACCTGC 1 cut(s) 2978
PceI AGGCCT 2 cut(s) 2700, 2848
PctI GAATGC 1 cut(s) 1944
PdmI GAANNNNTTC 1 cut(s) 1190
PfeI GAWTC 2 cut(s) 1314, 3035
PkrI GCNGC 3 cut(s) 1526, 2050, 2839
PleI GAGTC 4 cut(s) 738, 1843, 1870, 2422
PluTI GGCGCC 1 cut(s) 2576
PpsI GAGTC 4 cut(s) 738, 1843, 1870, 2422
Ppu21I YACGTR 2 cut(s) 956, 1512
PshAI GACNNNNGTC 2 cut(s) 53, 2499
Psp124BI GAGCTC 1 cut(s) 1160
Psp6I CCWGG 2 cut(s) 1982, 2376
PspFI CCCAGC 1 cut(s) 219
PspGI CCWGG 2 cut(s) 1982, 2376
PspN4I GGNNCC 5 cut(s) 775, 1235, 2574, 2757, 2913
PspOMI GGGCCC 1 cut(s) 773
PspPI GGNCC 6 cut(s) 773, 774, 917, 1346, 1802, 2324
PstI CTGCAG 1 cut(s) 2863
PstNI CAGNNNCTG 1 cut(s) 1904
PvuII CAGCTG 1 cut(s) 219
RsaI GTAC 6 cut(s) 348, 672, 1174, 1478, 2131, 2433
RsaNI GTAC 6 cut(s) 347, 671, 1173, 1477, 2130, 2432
RseI CAYNNNNRTG 2 cut(s) 50, 1667
SacI GAGCTC 1 cut(s) 1160
SatI GCNGC 3 cut(s) 1525, 2049, 2838
Sau96I GGNCC 6 cut(s) 773, 774, 917, 1346, 1802, 2324
ScaI AGTACT 1 cut(s) 672
SchI GAGTC 4 cut(s) 739, 1844, 1871, 2423
ScrFI CCNGG 2 cut(s) 1984, 2378
SduI GDGCHC 3 cut(s) 777, 1160, 2716
SfaNI GCATC 2 cut(s) 51, 2832
SfcI CTRYAG 3 cut(s) 1824, 2559, 2859
SfoI GGCGCC 1 cut(s) 2574
SinI GGWCC 3 cut(s) 917, 1346, 1802
SmiMI CAYNNNNRTG 2 cut(s) 50, 1667
SmlI CTYRAG 4 cut(s) 674, 832, 862, 2950
SmoI CTYRAG 4 cut(s) 674, 832, 862, 2950
SnaBI TACGTA 2 cut(s) 956, 1512
SseBI AGGCCT 2 cut(s) 2700, 2848
SsiI CCGC 4 cut(s) 425, 762, 782, 2141
SspDI GGCGCC 1 cut(s) 2572
SspI AATATT 1 cut(s) 816
SspMI CTAG 4 cut(s) 536, 759, 786, 911
SstI GAGCTC 1 cut(s) 1160
StuI AGGCCT 2 cut(s) 2700, 2848
StyD4I CCNGG 2 cut(s) 1982, 2376
StyI CCWWGG 2 cut(s) 769, 2759
TaiI ACGT 5 cut(s) 195, 288, 309, 958, 1514
TaqI TCGA 6 cut(s) 189, 938, 1255, 2514, 2677, 2895
TaqII GACCGA 2 cut(s) 599, 1353
TatI WGTACW 5 cut(s) 346, 670, 1172, 1476, 2431
TfiI GAWTC 2 cut(s) 1314, 3035
TscAI CASTG 5 cut(s) 418, 832, 1057, 1399, 1905
TseFI GTSAC 2 cut(s) 307, 827
TseI GCWGC 3 cut(s) 1524, 2048, 2837
Tsp45I GTSAC 2 cut(s) 307, 827
TspDTI ATGAA 9 cut(s) 64, 837, 1158, 1742, 2280, 2298, 2532, 2684, 2913
TspGWI ACGGA 1 cut(s) 1627
TspRI CASTG 5 cut(s) 418, 832, 1057, 1399, 1905
Vha464I CTTAAG 1 cut(s) 674
VpaK11BI GGWCC 3 cut(s) 917, 1346, 1802
XapI RAATTY 5 cut(s) 1145, 1415, 1706, 2183, 2672
XmiI GTMKAC 2 cut(s) 195, 2106
XmnI GAANNNNTTC 1 cut(s) 1190
XspI CTAG 4 cut(s) 536, 759, 786, 911
ZrmI AGTACT 1 cut(s) 672
Zsp2I ATGCAT 1 cut(s) 2825
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.