RLG00000018129
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
25610244 .. 25620124
9881 bp
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UTR
Exon/CDS
Intron
RLM00000018129

Sequence Viewer

Length: 2304 bp
ATGTCAGGGGGTGCCTCCTTATCAGTTTTGGTCTTAGTTTTGTGCATCTCTGGTATAGCACAAGCTCAAGTTTCTGCTCCTGCTCCTCAACCTCAAGCTACTAATGCCACCACTGACCCATCTCAAGCGAGAGCTTTGAATTCAGTGTTTGAGAAATGGAATATTCGGGCCAATCCGAAGAATTTGGCACTGAATTACTTGACAGGACCTCTCTCTGCAGCCATTGCAAATCTAACTGGCTTGCAATACTTTACTGTTGGCATCAACGATTTATCAGGCGAGCTACCTAAAGAACTTGGACAACTTACTGAGCTGAGATCATTGGCTTTTGGGGGAAACAACTTTTCGGGTTCTCTGCCATCTGAGCTAGGGAATTTATTCAATTTACAACAGCTTTACATTGATAGTTCTGGAGTTAGCGGTGAGATTCCACCAACATTTGGTGATCTACAAAACTTGGAGATTTTTTGGGCTAGAAATGTTGAACTCTCTGGCAGGATACCAGACTTCATTGGGAATTGGTCAAAGCTTACTTCCTTGAGGTTTCAAGGAAACTCTTTCGAAGGTCCTATACCATTTGCATTTTCCAATCTGACTTCTATGAAAGAGCTACGCATTACTGATTTGTCGAATGCCAATGGGAGTTCTTCTCTTGCGTTTATTGAGAATATGAAGGCTCTAAATATCTTAGTGCTGAGGAATAACAATATTTCTGATTCAATTCCTTCCGATTTTGGATTATACCAAAGTTTGTCTCAGCTCGACATGAGTATCAACAACTCAATGATTAGCATACGACCTGAGATTACGTCTTCCTCCGATGGGATTGTGTATGAGAAGGAAAATGAGCCCCTTGGACCAGCTTCATATTTTGTGACTGGCACAAGCAGATGGGGAGTTAGCAATGTCGGATATTTCACTGACAGTACCAATCCTAAGTATACAAGTTTCTCCTCATCTCAATTCACAAATACTTTTGATTCTGTGCTATTCCAGACTGCAAGGCTCTCTGCTTCATCAATTAGATACTTTGGCTTGGGGCTTGAGAATGGTAACTACACCGTGAACCTCAAGTTTGCAGAACATGTCATCCTGGCTGCTACTACCGGGAAATTTCTTGGGAGACGTCTTTTTGATATTTATATCCAGGGCATTCTGGTGTCAAAGGATTTTGATATACTAAAGGAGGCAGGTATGTCATCTTTCCGAGCTGTTCAGAAGCCATACACGGCTCATGTTTTGGAGAACTACCTTGAAATCCATCTCTTTTGGGCTGGAAAGGGGACTTGCTGCGGAACACTTAATGATGGAAGAGTAATTGCTGTGAAGCAGTTGTCTGCAGCATCCCACCAAGGAAAGAACCAGTTTGTAACTGAGATTGCCACTATATCTGCTGTGCAACACAATAACCTGGTAAAGTTGTACGGATTCTGCACTGAGGGAGTTAAAAGGCTCCTTGTCTATGAGTATCTGGAGAACAACAGTCTTGATCAAGCATTATTTGGAGAGAGACGTTTAAATCTTGATTGGTCAACACGTTTTAATATATGCTTGGGCATAGCCAGAGGTTTAACTTATCTTCACGAAGAATCAAGGGTTCGAATTGTACACAGAGATGTGAAGGCCAGTAATATTTTGCTTGACACTAATCTCATCCCCAAGATATCGGATTTTGGTTTGGCTAAGCTTTTTGATGAGAAAAAGACCCACATAAGTACCCATGTTGCGGGAACAATTGGGTATCTTGCACCGGAATATGCCATGCGTGGACACCTTACAGAGAAGACTGATGTCTTTGCCTTTGGTGTTGTGGCTCTTGAAATTGTCAGTGGTAGGCCAAACTCTGATCCGAGTTTGGGTGAAGAAATGACATATCTTCTCGAATGGGCTTGGCAATTGCATGAAAACAGACGGGCTGTTGAACTAGTGGACTCTAGATTATCTGAATTCAATGAGGAAGAAGCACAACGAATAATCAAAATAGGACTTTTGTGCACTCAAACATCACCAATGCTGCGACCATCCATGTCCCGTGTAGTGGGAATGCTTTCAGGAGATATGGAAGTGACAACAGTAACTTCAAAGCCCGGTTACTTGACAGACTGGAAATTTGATGATTTAACTACAGTCACCAGCCTAACAAAACTGGATGGTGTAAGTACTGTCACCAACCTAGCGGTTGATATGACGACTAAAGGAACTGATTTTAGCTTCAACAACTCATCGGCAAGTACAAGCATAATGGGTCAATCACCTCCTAAAGCCATTCATTCTATGTCTGAAAATACTGTTGATGGTCGGTGA

Protein Analysis

768

Amino Acids

84.17

Weight (kDa)

5.61

Isoelectric Point (pI)

35.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 74 - 181 3.8e-09 Leucine-rich repeat region
LRR_14 PF23598 121 - 254 1.7e-09 Leucine-rich repeat region
Malectin PF11721 267 - 431 2.4e-30 Malectin domain
Pkinase PF00069 432 - 679 9.4e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 436 - 681 1.7e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1129
Acc36I ACCTGC 1 cut(s) 1181
AccB1I GGYRCC 1 cut(s) 11
AccB7I CCANNNNNTGG 1 cut(s) 440
AccI GTMKAC 1 cut(s) 941
AciI CCGC 4 cut(s) 420, 1293, 1727, 2177
AclWI GGATC 1 cut(s) 1841
AcsI RAATTY 6 cut(s) 139, 181, 373, 1112, 1946, 2108
AcyI GRCGYC 1 cut(s) 1126
AfaI GTAC 6 cut(s) 928, 1424, 1608, 1717, 2161, 2233
AfiI CCNNNNNNNGG 5 cut(s) 440, 822, 1726, 1856, 2038
AflIII ACRYGT 2 cut(s) 1084, 1535
AhlI ACTAGT 1 cut(s) 1924
AjnI CCWGG 3 cut(s) 1092, 1146, 1410
AloI GAACNNNNNNTCC 2 cut(s) 1074, 1106
Alw21I GWGCWC 1 cut(s) 1997
Alw26I GTCTC 3 cut(s) 759, 1117, 1504
Alw44I GTGCAC 1 cut(s) 1993
AlwI GGATC 1 cut(s) 1841
AoxI GGCC 3 cut(s) 168, 1623, 1835
ApaLI GTGCAC 1 cut(s) 1993
ApeKI GCWGC 5 cut(s) 218, 1097, 1290, 1340, 2014
ApoI RAATTY 6 cut(s) 139, 181, 373, 1112, 1946, 2108
ArsI GACNNNNNNTTYG 2 cut(s) 2093, 2125
Asp700I GAANNNNTTC 2 cut(s) 377, 2047
AspS9I GGNCC 4 cut(s) 168, 206, 566, 857
AsuC2I CCSGG 2 cut(s) 1108, 2088
AsuHPI GGTGA 7 cut(s) 434, 455, 1871, 1998, 2122, 2158, 2244
AsuII TTCGAA 2 cut(s) 561, 1600
AvaII GGWCC 3 cut(s) 206, 566, 857
BaeGI GKGCMC 1 cut(s) 1997
BaeI ACNNNNGTAYC 4 cut(s) 754, 787, 1699, 1732
BanI GGYRCC 1 cut(s) 11
BanII GRGCYC 1 cut(s) 852
BarI GAAGNNNNNNTAC 2 cut(s) 555, 587
BbsI GAAGAC 2 cut(s) 804, 1790
Bbv12I GWGCWC 1 cut(s) 1997
BbvCI CCTCAGC 1 cut(s) 695
BbvI GCAGC 5 cut(s) 230, 1084, 1277, 1352, 2001
BccI CCATC 9 cut(s) 127, 367, 815, 885, 1269, 1301, 2029, 2144, 2288
BceAI ACGGC 1 cut(s) 1245
BciT130I CCWGG 3 cut(s) 1094, 1148, 1412
BciVI GTATCC 1 cut(s) 492
BclI TGATCA 1 cut(s) 1489
BcnI CCSGG 2 cut(s) 1108, 2088
BcoDI GTCTC 3 cut(s) 759, 1117, 1504
BcuI ACTAGT 1 cut(s) 1924
BfaI CTAG 5 cut(s) 368, 474, 1925, 1935, 2174
BfmI CTRYAG 3 cut(s) 216, 1338, 2124
BfuAI ACCTGC 1 cut(s) 1181
BfuI GTATCC 1 cut(s) 492
BisI GCNGC 5 cut(s) 219, 1098, 1291, 1341, 2015
BlpI GCTNAGC 1 cut(s) 1683
BlsI GCNGC 5 cut(s) 220, 1099, 1292, 1342, 2016
BmcAI AGTACT 1 cut(s) 2161
Bme1390I CCNGG 5 cut(s) 1094, 1108, 1148, 1412, 2088
Bme18I GGWCC 3 cut(s) 206, 566, 857
BmgT120I GGNCC 4 cut(s) 168, 206, 566, 857
BmiI GGNNCC 2 cut(s) 13, 1454
BmrFI CCNGG 5 cut(s) 1094, 1108, 1148, 1412, 2088
BmsI GCATC 3 cut(s) 54, 270, 1352
BoxI GACNNNNGTC 1 cut(s) 1790
BpiI GAAGAC 2 cut(s) 804, 1790
BplI GAGNNNNNCTC 2 cut(s) 634, 666
BpmI CTGGAG 2 cut(s) 432, 1493
Bpu10I CCTNAGC 1 cut(s) 695
Bpu1102I GCTNAGC 1 cut(s) 1683
Bpu14I TTCGAA 2 cut(s) 561, 1600
BpuEI CTTGAG 6 cut(s) 51, 78, 108, 559, 1055, 1064
BpuMI CCSGG 2 cut(s) 1108, 2088
BsaHI GRCGYC 1 cut(s) 1126
BsaJI CCNNGG 3 cut(s) 853, 1147, 1351
BsaWI WCCGGW 1 cut(s) 1750
Bsc4I CCNNNNNNNGG 5 cut(s) 440, 822, 1726, 1856, 2038
Bse1I ACTGG 6 cut(s) 241, 883, 1363, 1626, 2108, 2151
Bse3DI GCAATG 2 cut(s) 222, 910
BseBI CCWGG 3 cut(s) 1094, 1148, 1412
BseDI CCNNGG 3 cut(s) 853, 1147, 1351
BseGI GGATG 5 cut(s) 1089, 1343, 1653, 2021, 2155
BseLI CCNNNNNNNGG 5 cut(s) 440, 822, 1726, 1856, 2038
BseMI GCAATG 2 cut(s) 222, 910
BseMII CTCAG 8 cut(s) 300, 305, 354, 686, 770, 792, 1365, 1428
BseNI ACTGG 6 cut(s) 241, 883, 1363, 1626, 2108, 2151
BseRI GAGGAG 2 cut(s) 75, 943
BseSI GKGCMC 1 cut(s) 1997
BseXI GCAGC 5 cut(s) 230, 1084, 1277, 1352, 2001
BsgI GTGCAG 1 cut(s) 1417
BshFI GGCC 3 cut(s) 170, 1625, 1837
BshNI GGYRCC 1 cut(s) 11
BsiHKAI GWGCWC 1 cut(s) 1997
BsiSI CCGG 3 cut(s) 1107, 1751, 2088
BslFI GGGAC 2 cut(s) 1297, 2014
BslI CCNNNNNNNGG 5 cut(s) 440, 822, 1726, 1856, 2038
BsmAI GTCTC 3 cut(s) 759, 1117, 1504
BsmBI CGTCTC 2 cut(s) 1117, 1504
BsmFI GGGAC 2 cut(s) 1297, 2014
BsmI GAATGC 3 cut(s) 637, 1152, 2049
BsnI GGCC 3 cut(s) 170, 1625, 1837
Bsp119I TTCGAA 2 cut(s) 561, 1600
Bsp1286I GDGCHC 2 cut(s) 852, 1997
Bsp1407I TGTACA 1 cut(s) 1606
Bsp143I GATC 4 cut(s) 317, 445, 1489, 1846
Bsp1720I GCTNAGC 1 cut(s) 1683
BspACI CCGC 4 cut(s) 420, 1293, 1727, 2177
BspANI GGCC 3 cut(s) 170, 1625, 1837
BspCNI CTCAG 8 cut(s) 301, 306, 355, 687, 769, 793, 1366, 1429
BspLI GGNNCC 2 cut(s) 13, 1454
BspMAI CTGCAG 2 cut(s) 220, 1342
BspMI ACCTGC 1 cut(s) 1181
BspPI GGATC 1 cut(s) 1841
BspT104I TTCGAA 2 cut(s) 561, 1600
BspT107I GGYRCC 1 cut(s) 11
BsrDI GCAATG 2 cut(s) 222, 910
BsrGI TGTACA 1 cut(s) 1606
BsrI ACTGG 6 cut(s) 241, 883, 1363, 1626, 2108, 2151
BssECI CCNNGG 3 cut(s) 853, 1147, 1351
BssMI GATC 4 cut(s) 317, 445, 1489, 1846
BssNAI GTATAC 1 cut(s) 942
BssNI GRCGYC 1 cut(s) 1126
BssT1I CCWWGG 2 cut(s) 853, 1351
Bst1107I GTATAC 1 cut(s) 942
Bst2UI CCWGG 3 cut(s) 1094, 1148, 1412
Bst4CI ACNGT 8 cut(s) 256, 926, 1063, 1484, 2074, 2128, 2164, 2290
Bst6I CTCTTC 1 cut(s) 1306
BstACI GRCGYC 1 cut(s) 1126
BstAPI GCANNNNNTGC 1 cut(s) 224
BstAUI TGTACA 1 cut(s) 1606
BstBI TTCGAA 2 cut(s) 561, 1600
BstC8I GCNNGC 2 cut(s) 242, 281
BstF5I GGATG 5 cut(s) 1089, 1343, 1653, 2021, 2155
BstKTI GATC 4 cut(s) 320, 448, 1492, 1849
BstMAI GTCTC 3 cut(s) 759, 1117, 1504
BstMBI GATC 4 cut(s) 317, 445, 1489, 1846
BstMWI GCNNNNNNNGC 3 cut(s) 104, 224, 364
BstNI CCWGG 3 cut(s) 1094, 1148, 1412
BstNSI RCATGY 1 cut(s) 1088
BstPAI GACNNNNGTC 1 cut(s) 1790
BstSCI CCNGG 5 cut(s) 1092, 1106, 1146, 1410, 2086
BstSFI CTRYAG 3 cut(s) 216, 1338, 2124
BstSLI GKGCMC 1 cut(s) 1997
BstV1I GCAGC 5 cut(s) 230, 1084, 1277, 1352, 2001
BstV2I GAAGAC 2 cut(s) 804, 1790
BstZ17I GTATAC 1 cut(s) 942
BsuI GTATCC 1 cut(s) 492
BsuRI GGCC 3 cut(s) 170, 1625, 1837
BtsCI GGATG 5 cut(s) 1089, 1343, 1653, 2021, 2155
BtsIMutI CAGTG 6 cut(s) 111, 150, 188, 918, 1434, 1834
BveI ACCTGC 1 cut(s) 1181
Cac8I GCNNGC 2 cut(s) 242, 281
Cfr13I GGNCC 4 cut(s) 168, 206, 566, 857
CsiI ACCWGGT 1 cut(s) 1410
Csp6I GTAC 6 cut(s) 927, 1423, 1607, 1716, 2160, 2232
CviAII CATG 7 cut(s) 766, 1085, 1235, 1721, 1762, 1901, 2026
CviQI GTAC 6 cut(s) 927, 1423, 1607, 1716, 2160, 2232
DpnI GATC 4 cut(s) 319, 447, 1491, 1848
DpnII GATC 4 cut(s) 317, 445, 1489, 1846
DraI TTTAAA 1 cut(s) 1518
Eam1104I CTCTTC 1 cut(s) 1306
EarI CTCTTC 1 cut(s) 1306
Eco130I CCWWGG 2 cut(s) 853, 1351
Eco24I GRGCYC 1 cut(s) 852
Eco32I GATATC 1 cut(s) 1665
Eco47I GGWCC 3 cut(s) 206, 566, 857
EcoO109I RGGNCCY 2 cut(s) 206, 566
EcoRI GAATTC 2 cut(s) 139, 1946
EcoRII CCWGG 3 cut(s) 1092, 1146, 1410
EcoRV GATATC 1 cut(s) 1665
EcoT14I CCWWGG 2 cut(s) 853, 1351
EcoT38I GRGCYC 1 cut(s) 852
ErhI CCWWGG 2 cut(s) 853, 1351
Esp3I CGTCTC 2 cut(s) 1117, 1504
FaeI CATG 7 cut(s) 769, 1088, 1238, 1724, 1765, 1904, 2029
FaqI GGGAC 2 cut(s) 1297, 2014
FatI CATG 7 cut(s) 765, 1084, 1234, 1720, 1761, 1900, 2025
FauI CCCGC 1 cut(s) 1720
FbaI TGATCA 1 cut(s) 1489
FblI GTMKAC 1 cut(s) 941
Fnu4HI GCNGC 5 cut(s) 219, 1098, 1291, 1341, 2015
FokI GGATG 5 cut(s) 1076, 1330, 1640, 2008, 2162
FriOI GRGCYC 1 cut(s) 852
Fsp4HI GCNGC 5 cut(s) 219, 1098, 1291, 1341, 2015
FspBI CTAG 5 cut(s) 368, 474, 1925, 1935, 2174
GluI GCNGC 5 cut(s) 219, 1098, 1291, 1341, 2015
GsuI CTGGAG 2 cut(s) 432, 1493
HaeIII GGCC 3 cut(s) 170, 1625, 1837
HapII CCGG 3 cut(s) 1107, 1751, 2088
Hin1I GRCGYC 1 cut(s) 1126
Hin1II CATG 7 cut(s) 769, 1088, 1238, 1724, 1765, 1904, 2029
HincII GTYRAC 1 cut(s) 1533
HindII GTYRAC 1 cut(s) 1533
HindIII AAGCTT 2 cut(s) 527, 1685
HinfI GANTC 6 cut(s) 427, 716, 980, 1428, 1589, 1931
HpaII CCGG 3 cut(s) 1107, 1751, 2088
HphI GGTGA 7 cut(s) 434, 455, 1871, 1998, 2122, 2158, 2244
Hpy166II GTNNAC 7 cut(s) 942, 1066, 1533, 1609, 1769, 1930, 1995
Hpy8I GTNNAC 7 cut(s) 942, 1066, 1533, 1609, 1769, 1930, 1995
HpyAV CCTTC 5 cut(s) 557, 667, 735, 832, 1615
HpyCH4III ACNGT 8 cut(s) 256, 926, 1063, 1484, 2074, 2128, 2164, 2290
HpyCH4IV ACGT 4 cut(s) 809, 1126, 1513, 1537
HpyF10VI GCNNNNNNNGC 3 cut(s) 104, 224, 364
HpySE526I ACGT 4 cut(s) 809, 1126, 1513, 1537
Hsp92I GRCGYC 1 cut(s) 1126
Hsp92II CATG 7 cut(s) 769, 1088, 1238, 1724, 1765, 1904, 2029
Ksp22I TGATCA 1 cut(s) 1489
Kzo9I GATC 4 cut(s) 317, 445, 1489, 1846
LmnI GCTCC 3 cut(s) 82, 88, 1458
Lsp1109I GCAGC 5 cut(s) 230, 1084, 1277, 1352, 2001
LweI GCATC 3 cut(s) 54, 270, 1352
MabI ACCWGGT 1 cut(s) 1410
MaeI CTAG 5 cut(s) 368, 474, 1925, 1935, 2174
MaeII ACGT 4 cut(s) 809, 1126, 1513, 1537
MaeIII GTNAC 8 cut(s) 874, 1052, 1369, 2065, 2074, 2090, 2128, 2164
MalI GATC 4 cut(s) 319, 447, 1491, 1848
MboI GATC 4 cut(s) 317, 445, 1489, 1846
MfeI CAATTG 2 cut(s) 1734, 1895
MhlI GDGCHC 2 cut(s) 852, 1997
MlyI GAGTC 1 cut(s) 1925
MmeI TCCRAC 1 cut(s) 889
MroXI GAANNNNTTC 2 cut(s) 377, 2047
MseI TTAA 6 cut(s) 1302, 1446, 1517, 1542, 1571, 2120
MslI CAYNNNNRTG 2 cut(s) 1157, 1614
MspI CCGG 3 cut(s) 1107, 1751, 2088
MspR9I CCNGG 5 cut(s) 1094, 1108, 1148, 1412, 2088
MunI CAATTG 2 cut(s) 1734, 1895
Mva1269I GAATGC 3 cut(s) 637, 1152, 2049
MvaI CCWGG 3 cut(s) 1094, 1148, 1412
MwoI GCNNNNNNNGC 3 cut(s) 104, 224, 364
NciI CCSGG 2 cut(s) 1108, 2088
NdeII GATC 4 cut(s) 317, 445, 1489, 1846
NlaIII CATG 7 cut(s) 769, 1088, 1238, 1724, 1765, 1904, 2029
NlaIV GGNNCC 2 cut(s) 13, 1454
NmuCI GTSAC 4 cut(s) 874, 2065, 2128, 2164
NspI RCATGY 1 cut(s) 1088
NspV TTCGAA 2 cut(s) 561, 1600
PciI ACATGT 1 cut(s) 1084
PctI GAATGC 3 cut(s) 637, 1152, 2049
PdmI GAANNNNTTC 2 cut(s) 377, 2047
PfeI GAWTC 5 cut(s) 427, 716, 980, 1428, 1589
PflMI CCANNNNNTGG 1 cut(s) 440
PkrI GCNGC 5 cut(s) 220, 1099, 1292, 1342, 2016
PleI GAGTC 1 cut(s) 1925
PpsI GAGTC 1 cut(s) 1925
PpuMI RGGWCCY 2 cut(s) 206, 566
PscI ACATGT 1 cut(s) 1084
PshAI GACNNNNGTC 1 cut(s) 1790
Psp5II RGGWCCY 2 cut(s) 206, 566
Psp6I CCWGG 3 cut(s) 1092, 1146, 1410
PspGI CCWGG 3 cut(s) 1092, 1146, 1410
PspN4I GGNNCC 2 cut(s) 13, 1454
PspPI GGNCC 4 cut(s) 168, 206, 566, 857
PspPPI RGGWCCY 2 cut(s) 206, 566
PstI CTGCAG 2 cut(s) 220, 1342
RsaI GTAC 6 cut(s) 928, 1424, 1608, 1717, 2161, 2233
RsaNI GTAC 6 cut(s) 927, 1423, 1607, 1716, 2160, 2232
RseI CAYNNNNRTG 2 cut(s) 1157, 1614
SaqAI TTAA 6 cut(s) 1302, 1446, 1517, 1542, 1571, 2120
SatI GCNGC 5 cut(s) 219, 1098, 1291, 1341, 2015
Sau3AI GATC 4 cut(s) 317, 445, 1489, 1846
Sau96I GGNCC 4 cut(s) 168, 206, 566, 857
ScaI AGTACT 1 cut(s) 2161
SchI GAGTC 1 cut(s) 1925
ScrFI CCNGG 5 cut(s) 1094, 1108, 1148, 1412, 2088
SduI GDGCHC 2 cut(s) 852, 1997
SexAI ACCWGGT 1 cut(s) 1410
SfaNI GCATC 3 cut(s) 54, 270, 1352
SfcI CTRYAG 3 cut(s) 216, 1338, 2124
SfuI TTCGAA 2 cut(s) 561, 1600
SinI GGWCC 3 cut(s) 206, 566, 857
SmiMI CAYNNNNRTG 2 cut(s) 1157, 1614
SmlI CTYRAG 6 cut(s) 66, 93, 123, 538, 1043, 1070
SmoI CTYRAG 6 cut(s) 66, 93, 123, 538, 1043, 1070
SpeI ACTAGT 1 cut(s) 1924
SsiI CCGC 4 cut(s) 420, 1293, 1727, 2177
SspI AATATT 3 cut(s) 163, 709, 1633
SspMI CTAG 5 cut(s) 368, 474, 1925, 1935, 2174
StyD4I CCNGG 5 cut(s) 1092, 1106, 1146, 1410, 2086
StyI CCWWGG 2 cut(s) 853, 1351
TaaI ACNGT 8 cut(s) 256, 926, 1063, 1484, 2074, 2128, 2164, 2290
TaiI ACGT 4 cut(s) 812, 1129, 1516, 1540
TaqI TCGA 5 cut(s) 561, 629, 762, 1600, 1881
TatI WGTACW 3 cut(s) 1606, 2159, 2231
TfiI GAWTC 5 cut(s) 427, 716, 980, 1428, 1589
Tru1I TTAA 6 cut(s) 1302, 1446, 1517, 1542, 1571, 2120
Tru9I TTAA 6 cut(s) 1302, 1446, 1517, 1542, 1571, 2120
TscAI CASTG 6 cut(s) 118, 150, 195, 925, 1441, 1834
TseFI GTSAC 4 cut(s) 874, 2065, 2128, 2164
TseI GCWGC 5 cut(s) 218, 1097, 1290, 1340, 2014
Tsp45I GTSAC 4 cut(s) 874, 2065, 2128, 2164
TspDTI ATGAA 7 cut(s) 499, 617, 686, 855, 1005, 1917, 2258
TspGWI ACGGA 1 cut(s) 1440
TspRI CASTG 6 cut(s) 118, 150, 195, 925, 1441, 1834
Van91I CCANNNNNTGG 1 cut(s) 440
VneI GTGCAC 1 cut(s) 1993
VpaK11BI GGWCC 3 cut(s) 206, 566, 857
XapI RAATTY 6 cut(s) 139, 181, 373, 1112, 1946, 2108
XbaI TCTAGA 1 cut(s) 1934
XceI RCATGY 1 cut(s) 1088
XmiI GTMKAC 1 cut(s) 941
XmnI GAANNNNTTC 2 cut(s) 377, 2047
XspI CTAG 5 cut(s) 368, 474, 1925, 1935, 2174
ZraI GACGTC 1 cut(s) 1127
ZrmI AGTACT 1 cut(s) 2161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.